Skip to content
Snippets Groups Projects
Commit da4089af authored by Alexander van Meegen's avatar Alexander van Meegen
Browse files

Add pytest to requirements

parent a6b7ecb2
No related branches found
No related tags found
1 merge request!23Fix issues raised by golosio
......@@ -87,7 +87,7 @@ basic analysis and plotting.
## Analysis and figure scripts for [1-3]
The `figures` folder contains subfolders with all scripts necessary to produce
the figures from [1-3]. If Snakemake (Köster J & Rahmann S, Bioinformatics (2012) 28(19): 2520-2522)
the figures from [1-3]. If Snakemake (Köster J & Rahmann S, Bioinformatics (2012) 28(19): 2520-2522)
is installed, the figures can be produced by executing
`snakemake` in the respective folder, e.g.:
......@@ -203,7 +203,7 @@ conveniently run by executing `pytest` in the `tests/` folder:
## Requirements
Python 3, python\_dicthash ([https://github.com/INM-6/python-dicthash](https://github.com/INM-6/python-dicthash)),
correlation\_toolbox ([https://github.com/INM-6/correlation-toolbox](https://github.com/INM-6/correlation-toolbox)),
pandas, numpy, nested_dict, matplotlib (2.1.2), scipy, NEST 2.14.0
pandas, numpy, nested_dict, matplotlib (2.1.2), scipy, pytest, NEST 2.14.0
Optional: seaborn, Sumatra
......
......@@ -3,5 +3,6 @@ numpy
matplotlib
pandas
scipy
pytest
nested_dict
dicthash
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment