GitLab

Integration between TVB and NEST, for multiscale (co)simulations .

Arbor: a multi-compartment neural network simulation library

Mirror of https://github.com/Hjorthmedh/Snudda/

Main TVB codebase

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

Biobb-common is the base package required to use biobb packages

Generate subject connectomes from raw image data and perform inter-subject connection density normalisation, using tools provided in the MRtrix3 software package.

PyUnicoreManager is a wrapper of PyUnicore library to implement real uses for different frameworks

NeuroTessMesh provides a visual environment for the generation of 3D polygonal meshes that approximate the membrane of neuronal cells, from the morphological tracings that describe the morphology of the neurons.

Builds of CmdStan for the Collaboratory & HPC sites.

Visualization framework that allows to analyze and visualize neuronal activity simulations.

It is Neurodegenerative disease progression tracker to analyse and compare data between different snapshots during the lifetime of the user.