pre-release

SI/Gi_parameters.csv

 Parameter,Value,Unit
-time_in,0,s
-time_out,0,s
 L_init,0.01,uM
 R_init,2,uM
 Gi_init,3,uM

SI/Gq_parameters.csv

 Parameter,Value,Unit
-time_in,0,s
-time_out,0,s
 Gq_a_GDP_init:0.0027739,uM
 Gq_a_GDP_init:6.4172E-4,uM
 Gq_bg_init:0.0037173,uM

SI/Gs_parameters.csv

 Parameter,Value,Unit
-time_in,0,s
-time_out,0,s
 L_init,0.01,uM
 R_init,2,uM
 Golf_init,2,uM

src/lib/pathways/Gq_parameters.csv

 Parameter,Value,Unit
 time_in,0,s
 time_out,0,s
-Gq_a_GDP_init:0.0027739,uM
-Gq_a_GDP_init:6.4172E-4,uM
-Gq_bg_init:0.0037173,uM
-RGS4_init:0.019994,uM
-RGS4_Gq_a_GTP_init:6.4168E-6,uM
-Ca_init:0.1,uM
-PLCb_init:0.090022,uM
-PLCb_Gq_a_GTP_init:1.4492E-4,uM
-PLCb_Ca_init:0.0093825,uM
-PLCb_Ca_Gq_a_GTP_init:1.5038E-4,uM
-PIP2_init:2.6578,uM
-IP3_init:0.21952,uM
-DAG_init:0.055555,uM
-R_Gq_trimer_init:0,uM
-R_L_Gq_trimer_init:0,uM
-Gq_trimer_init:0.61869,uM
-RL_kon:1.00,uM-1*s-1
-RL_koff:0.0046,s-1
-Gqa_Gqbg_kon:6.0,uM-1*s-1
-Gqa_Gqbg_koff:0.0001,s-1
-RL_Gq_decay:0.04,s-1
-RGS4_Gq_a_GTP_kon:20.83,uM-1*s-1
-RGS4_Gq_a_GTP_koff:33.32,s-1
-RGS4_Gq_a_GTP_decay:8.33,s-1
-Gq_a_GTP_decay:0.01,s-1
-Gq_a_GTP_PLCb_kon:2.52,uM-1*s-1
-Gq_a_GTP_PLCb_off:1.00,s-1
-Gq_a_GTP_PLCb_Ca_kon:30.0,uM-1*s-1
-Gq_a_GTP_PLCb_Ca_koff:1.00,s-1
-Gq_a_GTP_PLCb_Ca_decay:0.013,s-1
-PLCb_Ca_kon:3.00,uM-1*s-1
-PLCb_Ca_koff:1.00,s-1
-PLCb_Ca_Gq_a_GTP_kon:25.2,uM-1*s-1
-PLCb_Ca_Gq_a_GTP_koff:1.00,s-1
-DAG_decay:0.15,s-1
+Gq_a_GDP_init,0.0027739,uM
+Gq_a_GDP_init,6.4172E-4,uM
+Gq_bg_init,0.0037173,uM
+RGS4_init,0.019994,uM
+RGS4_Gq_a_GTP_init,6.4168E-6,uM
+Ca_init,0.1,uM
+PLCb_init,0.090022,uM
+PLCb_Gq_a_GTP_init,1.4492E-4,uM
+PLCb_Ca_init,0.0093825,uM
+PLCb_Ca_Gq_a_GTP_init,1.5038E-4,uM
+PIP2_init,2.6578,uM
+IP3_init,0.21952,uM
+DAG_init,0.055555,uM
+R_Gq_trimer_init,0,uM
+R_L_Gq_trimer_init,0,uM
+Gq_trimer_init,0.61869,uM
+RL_kon,1.00,uM-1*s-1
+RL_koff,0.0046,s-1
+Gqa_Gqbg_kon,6.0,uM-1*s-1
+Gqa_Gqbg_koff,0.0001,s-1
+RL_Gq_decay,0.04,s-1
+RGS4_Gq_a_GTP_kon,20.83,uM-1*s-1
+RGS4_Gq_a_GTP_koff,33.32,s-1
+RGS4_Gq_a_GTP_decay,8.33,s-1
+Gq_a_GTP_decay,0.01,s-1
+Gq_a_GTP_PLCb_kon,2.52,uM-1*s-1
+Gq_a_GTP_PLCb_off,1.00,s-1
+Gq_a_GTP_PLCb_Ca_kon,30.0,uM-1*s-1
+Gq_a_GTP_PLCb_Ca_koff,1.00,s-1
+Gq_a_GTP_PLCb_Ca_decay,0.013,s-1
+PLCb_Ca_kon,3.00,uM-1*s-1
+PLCb_Ca_koff,1.00,s-1
+PLCb_Ca_Gq_a_GTP_kon,25.2,uM-1*s-1
+PLCb_Ca_Gq_a_GTP_koff,1.00,s-1
+DAG_decay,0.15,s-1
 
 

src/lib/pathways/Gq_reactions.csv

-Reaction number,Reaction,Forward parameters names,Reverse parameter names,Forward default (1/(nM*s)),Reverse default (1/s)
+Reaction number,Reaction,Forward parameters names,Reverse parameter names,Forward default (1/(uM*s)),Reverse default (1/s)