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  1. Oct 31, 2017
    • Dilawar Singh's avatar
      Squashed 'moose-gui/' changes from 38da92b04..5d7f7633f · 0e72b330
      Dilawar Singh authored
      5d7f7633f Too many python3 incompatibility issues. For now on, gui is only compatible with python2.
      599dbd6d3 Testing with python3 as well. If python3 support is not intented, we can fallback this commit.
      83be02e60 changes made after addition of groups, some of action are implemented
      24cba7d6f  some more clean
      cdf16259d at file load dialog, a clean round trip is done
      08fc6cd0b at loading time, kkit model is checked for the atleast for 1 compartment and atleast 2 species
      373efaa6d check if moose object already exist, if yes use element, else create a object
      e37368553 in mousePressEvent further check made for group object along with compartment and other moose object
      ae6265ed8 travis is failing, while installing python-libsbml trying to fix providing -H
      c70f30098 some clean up with co-ordinates while saving into XML files
      dd177002c wrong comparsion with path and moose object was done corrected
      24ecdccac some clean up with groups
      84be91147 changes made related to group
      5a6c654c7 Merge branch 'master' of https://github.com/BhallaLab/moose-gui
      3fcc20a66 mgui in cleanup in dialog box, mload: sbml reader returns modelpath and errormsg, kkit: co-ordinates for sbml(auto co-ordinates) values are kept in annotation as its and while displayed as its, but for genesis default scenewidth and height is taken care and kkitOrdinatesUtil: sbml auto co-ordinates are kept as its
      d93fd2118 hover overcompartment shows name and some more cleaned up after the bad merger 320e525a and also wrong commit from 6fc726e
      ed79c3980 indentation correction and missing lib
      f4d880f53 Cleaned up, these 9 files after the bad merger 320e525a and also wrong commit from 6fc726e560556f7619e31fe022ef094793d6a13a
      2c594c457 in gui stoich.status along with warning, which Reac and Enz are dangling is also displayed in the QMessageBox
      
      git-subtree-dir: moose-gui
      git-subtree-split: 5d7f7633f5e20d48e4bfa0a2b38697c4d0d60d6a
      0e72b330
  2. Jun 21, 2017
    • Dilawar Singh's avatar
      Squashed 'moose-gui/' changes from 49779ba730..38da92b048 · 37cdf0cc
      Dilawar Singh authored
      38da92b048 Fixes to bad-merging.
      812d2d97f8 Merge commit '320e525a'
      6fc726e560 All changes from previous repository. No new file is added here.
      
      git-subtree-dir: moose-gui
      git-subtree-split: 38da92b0481f53ffd2cdc75d8f7aec49408dc4ae
      37cdf0cc
    • Dilawar Singh's avatar
      Squashed 'moose-gui/' changes from d282884250..49779ba730 · 320e525a
      Dilawar Singh authored
      49779ba730 As per Upi suggestion, co-ordinates are reprocessed for genesis file (yaxis is negated) at loading time so that, at the interface level co-ordinate are played around independently and while saving scene co-ordinates are save.
      1f32b418d2 Kd is calculated for second order reaction only and value is displayed in object editor,Notes header is added, and unit for Kd is added in default.py
      254d1f077a Enzyme can't be connected for second order reaction
      3038c31d1a missing import math
      355d721e4f added libsbml and moogli is removed
      0343ce3e11 Added a Model information, like number of compartment,group,pool,function,reaction etc when model is loaded for the first time
      
      git-subtree-dir: moose-gui
      git-subtree-split: 49779ba730bbbb214728c86d3550fc2b27d8ef24
      320e525a
  3. Apr 14, 2017
    • HarshaRani's avatar
      Squashed 'moose-gui/' changes from 2a1f94f..6104940 · e565756c
      HarshaRani authored
      6104940 units added to k1,k2,k3
      a3a80bf Using force-yes with -y to avoid problem with gpg keys. Probably breaking due to policy change in apt install.
      c994d93 one more attempt -y is removed
      b869143 one more attempt expired key
      a172670 checking with travis expired key
      8ee7c22 checking with travis expired key
      a208321 travis has a problem installing moose with -y opition trying this
      ff92eb5 print stm with python3 and changes made WRT to pool and bufpool with isBuffered flag
      744f262 isbuffered is editable and if value is set/unset
      a46cec9 cleanup in demo, filemenu links
      
      git-subtree-dir: moose-gui
      git-subtree-split: 61049405f17b22f27c74e7834dc1b2cfbab61699
      e565756c
  4. Feb 15, 2017
    • Dilawar Singh's avatar
      Squashed 'moose-gui/' changes from 2ba6bd5..2a1f94f · edb505a7
      Dilawar Singh authored
      2a1f94f modelRoot is cleanup for plotting if its comes from genesis or sbml, cleanup in networkx clean while import graphvizlayout
      9d55f14 Function can be now on pool class also, and networkx need not to be checked for version for using graphviz_layout, import from network.drawing took care off.
      35fb3ac If python-libsbml libs in not found, gui was failing to report which is fix here
      34df1fb found a way to use networkX graphviz_layout directly using a importing lib, now no need to check networkx version
      7b160c2 corrected indentation
      e3e5d2e Merge commit 'f0fd0e53'
      a89f6b3 BhallaLab/moose#204.
      
      git-subtree-dir: moose-gui
      git-subtree-split: 2a1f94f4be0d4643956232d2eed290b649f12a71
      edb505a7
  5. Jun 26, 2016
    • Dilawar Singh's avatar
      Squashed 'moose-gui/' changes from a3d3a06..bc510df · c8e99801
      Dilawar Singh authored
      bc510df removal of whitespace in target Name
      9eb3039 colormap check
      6884e38 Files with no model will not open pyqt widget, atleast one empty compartment should exist
      c830fa0 Merge pull request #9 from dilawar/master
      e1efc3d Merge branch 'master' of https://github.com/BhallaLab/moose-gui
      9603662 Added suds to the source code, removing a dependency.
      
      git-subtree-dir: moose-gui
      git-subtree-split: bc510df870a692283993da17d0fb5bef67edab25
      c8e99801
  6. May 18, 2016