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  1. Jun 30, 2016
  2. Jun 28, 2016
  3. Jun 27, 2016
    • Sam Yates's avatar
      Voltage and current probes · a867d77b
      Sam Yates authored
      * First implementation of simple current/voltage probe
        interface
      * Sample a specific collection of voltage or current
        values at independent dt (current implementation
        chooses to provide at most one sample per simulation
        dt per request.)
      * Miniapp uses samplers to write soma and dendrite
        membrane potentials from first three cells.
      * Also: fix noncompliant use of nullptr -> bool conversion
        in test_optional.cpp
      a867d77b
    • Sam Yates's avatar
      WIP · 1130c9f2
      Sam Yates authored
      1130c9f2
    • Benjamin Cumming's avatar
      WIP · 0ba28f1e
      Benjamin Cumming authored
      0ba28f1e
    • Benjamin Cumming's avatar
      WIP · d9119b7c
      Benjamin Cumming authored
      d9119b7c
  4. Jun 24, 2016
  5. Jun 23, 2016
  6. Jun 22, 2016
  7. Jun 17, 2016
  8. Jun 16, 2016
  9. Jun 15, 2016
    • Benjamin Cumming's avatar
      3553ac8b
    • Benjamin Cumming's avatar
      ... · 69fd3184
      Benjamin Cumming authored
      69fd3184
    • Vasileios Karakasis's avatar
      Low-level algorithms for manipulating cell trees. · 526953b5
      Vasileios Karakasis authored
      At this low level a cell tree is just a sequence of parent indices,
      where each parent index is the parent of the current index in the
      sequence. There four basic algorithms:
      
      1. child_count(parent_index):
         Computes the number of children for each node in parent_index
         	Time: O(N), Space: O(1)
      2. branches(parent_index):
         Returns a set of the branching nodes in parent_index, last branch
         index equals the parent_index's size.
      	 Time: O(N), Space: O(N)
      3. expand_branches(branch_index):
         Takes a branch_index (result from branches()) and expands it at the
         size of the original tree with all the nodes inside a branch having
         the same number.
               Time: O(parent_index), Space: O(1)
      4. make_parent_index(parent_index, branch_index):
         Return a compacted tree (single node per branch) from parent_index
         and its corresponding branch_index.
      	Time: O(N), Space: O(N)
      
      There is another utility function as well:
      
      find_branch(branch_index, nid):
          Returns the id of the branch where nid belongs to.
      	Time: O(N), Space: O(1)
      526953b5
    • Ben Cumming's avatar
      Merge pull request #2 from eth-cscs/master · c5b205c5
      Ben Cumming authored
      merge to my fork
      c5b205c5
  10. Jun 11, 2016