Skip to content
Snippets Groups Projects
Unverified Commit 135e91ac authored by Sam Yates's avatar Sam Yates Committed by GitHub
Browse files

Merge pull request #1123 from halfflat/feature/stitch-morphology

New PR post master rollback; squashed and rebased, but reprises #1111.

* Add (forward) ordered forest implementation, tests.
* Add `segment` region expression; to ease implementation, `msegment` now also knows its own id.
* Add `stitch_builder` and `stitched_morphology`. A stitch corresponds to a labelled, linearly-interpolated segment which can be attached at any point along a parent stitch. A `stitched_morphology` takes a `stitch_builder` object and constructs a segment tree and morphology, and provides a dictionary of stitch labels to segment indices and region expressions.
* Add `import` method for `label_dict`, so that the label dictionary returned by `stitched_morphology` can be merged with an existing dictionary.
* Add section on stitch builder etc. to cable cell docs.
* Update cable cell docs to remove out of date info and to provide some context.
* Describe ordered forest datastructure and interface in a long comment at the beginning of the header file.
parent 3cc73f1e
No related branches found
No related tags found
No related merge requests found
Showing
with 1296 additions and 143 deletions
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment