-
Brent Huisman authored
* bump version to v0.6-rc * Update `MANIFEST.in` and `scripts/run_python_examples.sh` * Update Release instructions `docs/contrib/release.rst` * Fix missing quotes in `python/example/single_cell_nml.py` * Add testing to sdist creation in `ciwheel.yml` * Rename `basic.yml` to `test-everything.yml` * Remove Python examples step from matrix (mostly because plotting takes much CPU on macos) * change to build /w nml * add test of pip builds (`pip install` in addition to CMake builds) * Python examples are tested here, once is enough.Unverifiedcf99bdce
run_python_examples.sh 1.38 KiB
#!/usr/bin/env bash
# Runs all Python examples
set -Eeuo pipefail
if [[ "$#" -gt 1 ]]; then
echo "usage: run_python_examples.sh <prefix>"
exit 1
fi
PREFIX=${1:-}
$PREFIX python -m pip install -r python/example/example_requirements.txt
$PREFIX python python/example/brunel.py -n 400 -m 100 -e 20 -p 0.1 -w 1.2 -d 1 -g 0.5 -l 5 -t 100 -s 1 -G 50 -S 123
# $PREFIX python python/dynamic-catalogue.py # arbor-build-catalog is a test already
$PREFIX python python/example/gap_junctions.py
# $PREFIX python python/example/network_ring_mpi_plot.py # requires MPI
# $PREFIX python python/example/network_ring_mpi.py # requires MPI
$PREFIX python python/example/network_ring.py
$PREFIX python python/example/single_cell_cable.py
$PREFIX python python/example/single_cell_detailed_recipe.py python/example/single_cell_detailed.swc
$PREFIX python python/example/single_cell_detailed.py python/example/single_cell_detailed.swc
$PREFIX python python/example/single_cell_extracellular_potentials.py python/example/single_cell_detailed.swc
$PREFIX python python/example/single_cell_model.py
$PREFIX python python/example/single_cell_nml.py python/example/morph.nml
$PREFIX python python/example/single_cell_recipe.py
$PREFIX python python/example/single_cell_stdp.py
$PREFIX python python/example/single_cell_swc.py python/example/single_cell_detailed.swc
$PREFIX python python/example/two_cell_gap_junctions.py