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Commit d42edc07 authored by Xiao Gui's avatar Xiao Gui
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hotfix: jubrain v18

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src/res/ext/MNI152.json
+ 253
− 300
View file @ d42edc07
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src/res/ext/MNI152NehubaConfig.json
+ 246
− 1
View file @ d42edc07
{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":false},"removePerspectiveSlicesBackground":{"mode":"<","color":[0.1,0.1,0.1,1]},"waitForMesh":false,"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{"mni152":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/mni_icbm152_t1_tal_nlin_asym_09c_masked","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"jubrain v17 left":{"type":"segmentation","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/17/icbm152casym/left","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"jubrain v17 right":{"type":"segmentation","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/17/icbm152casym/right","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle long":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/long-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle short":{"visible":false,"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/short-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":450000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
{
"globals": {
"hideNullImageValues": true,
"useNehubaLayout": true,
"useNehubaMeshLayer": true,
"useCustomSegmentColors": true
},
"zoomWithoutCtrl": true,
"hideNeuroglancerUI": true,
"rightClickWithCtrl": true,
"rotateAtViewCentre": true,
"zoomAtViewCentre": true,
"enableMeshLoadingControl": true,
"layout": {
"useNehubaPerspective": {
"fixedZoomPerspectiveSlices": {
"sliceViewportWidth": 300,
"sliceViewportHeight": 300,
"sliceZoom": 724698.1843689409,
"sliceViewportSizeMultiplier": 2
},
"centerToOrigin": true,
"mesh": {
"removeBasedOnNavigation": true,
"flipRemovedOctant": true,
"surfaceParcellation": false
},
"removePerspectiveSlicesBackground": {
"mode": "<",
"color": [
0.1,
0.1,
0.1,
1
]
},
"waitForMesh": false,
"drawSubstrates": {
"color": [
0.5,
0.5,
1,
0.2
]
},
"drawZoomLevels": {
"cutOff": 150000
},
"restrictZoomLevel": {
"minZoom": 2500000,
"maxZoom": 3500000
}
}
},
"dataset": {
"imageBackground": [
0,
0,
0,
1
],
"initialNgState": {
"showDefaultAnnotations": false,
"layers": {
"mni152": {
"type": "image",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/mni_icbm152_t1_tal_nlin_asym_09c_masked",
"transform": [
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-96500000
],
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-132500000
],
[
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-78500000
],
[
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]
]
},
"jubrain mni152 v18 left": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/18/icbm152casym/left",
"transform": [
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],
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],
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],
[
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]
]
},
"jubrain mni152 v18 right": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/18/icbm152casym/right",
"transform": [
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],
[
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],
[
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1
]
]
},
"fibre bundle long": {
"type": "segmentation",
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/long-bundles_maxprob",
"transform": [
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1,
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],
[
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],
[
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-78500000
],
[
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]
]
},
"fibre bundle short": {
"visible": false,
"type": "segmentation",
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/short-bundles_maxprob",
"transform": [
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],
[
0,
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],
[
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1
]
]
}
},
"navigation": {
"pose": {
"position": {
"voxelSize": [
1000000,
1000000,
1000000
],
"voxelCoordinates": [
0,
-32,
0
]
}
},
"zoomFactor": 450000
},
"perspectiveOrientation": [
-0.2753947079181671,
0.6631333827972412,
-0.6360703706741333,
0.2825356423854828
],
"perspectiveZoom": 3000000
}
}
}
\ No newline at end of file
src/res/ext/colin.json
+ 2156
− 1817
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This diff is collapsed.
src/res/ext/colinNehubaConfig.json
+ 209
− 1
View file @ d42edc07
{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":false},"removePerspectiveSlicesBackground":{"mode":"=="},"waitForMesh":false,"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{"colin":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/colin27_seg","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]},"jubrain v2_2c":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/MPM","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]},"jubrain colin v17 left":{"type":"segmentation","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/17/colin27/left","transform":[[1,0,0,-128500000],[0,1,0,-148500000],[0,0,1,-110500000],[0,0,0,1]]},"jubrain colin v17 right":{"type":"segmentation","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/17/colin27/right","transform":[[1,0,0,-128500000],[0,1,0,-148500000],[0,0,1,-110500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":1000000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
{
"globals": {
"hideNullImageValues": true,
"useNehubaLayout": true,
"useNehubaMeshLayer": true,
"useCustomSegmentColors": true
},
"zoomWithoutCtrl": true,
"hideNeuroglancerUI": true,
"rightClickWithCtrl": true,
"rotateAtViewCentre": true,
"zoomAtViewCentre": true,
"enableMeshLoadingControl": true,
"layout": {
"useNehubaPerspective": {
"fixedZoomPerspectiveSlices": {
"sliceViewportWidth": 300,
"sliceViewportHeight": 300,
"sliceZoom": 724698.1843689409,
"sliceViewportSizeMultiplier": 2
},
"centerToOrigin": true,
"mesh": {
"removeBasedOnNavigation": true,
"flipRemovedOctant": true,
"surfaceParcellation": false
},
"removePerspectiveSlicesBackground": {
"mode": "=="
},
"waitForMesh": false,
"drawSubstrates": {
"color": [
0.5,
0.5,
1,
0.2
]
},
"drawZoomLevels": {
"cutOff": 150000
},
"restrictZoomLevel": {
"minZoom": 2500000,
"maxZoom": 3500000
}
}
},
"dataset": {
"imageBackground": [
0,
0,
0,
1
],
"initialNgState": {
"showDefaultAnnotations": false,
"layers": {
"colin": {
"type": "image",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/colin27_seg",
"transform": [
[
1,
0,
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-75500000
],
[
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-111500000
],
[
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-67500000
],
[
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0,
1
]
]
},
"jubrain v2_2c": {
"type": "segmentation",
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/MPM",
"transform": [
[
1,
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-75500000
],
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-111500000
],
[
0,
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-67500000
],
[
0,
0,
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1
]
]
},
"jubrain colin v18 left": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/18/colin27/left",
"transform": [
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1,
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-128500000
],
[
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-148500000
],
[
0,
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-110500000
],
[
0,
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]
]
},
"jubrain colin v18 right": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/18/colin27/right",
"transform": [
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],
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],
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],
[
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]
]
}
},
"navigation": {
"pose": {
"position": {
"voxelSize": [
1000000,
1000000,
1000000
],
"voxelCoordinates": [
0,
-32,
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]
}
},
"zoomFactor": 1000000
},
"perspectiveOrientation": [
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-0.6360703706741333,
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],
"perspectiveZoom": 3000000
}
}
}
\ No newline at end of file
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