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Unverified Commit c9a9e2ec authored by xgui3783's avatar xgui3783 Committed by GitHub
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Merge pull request #809 from HumanBrainProject/chore_bigbrainOriginDatasets 

chore: add source dataset to big brain parc
parents cfe7dca6 53aa916d
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deploy/datasets/query.js
+ 1
− 1
View file @ c9a9e2ec
...@@ -168,7 +168,7 @@ const dsNamesToExclude = [ ...@@ -168,7 +168,7 @@ const dsNamesToExclude = [
'Corrected 3-D reconstruction and surface parcellation', 'Corrected 3-D reconstruction and surface parcellation',
'Probability map', 'Probability map',
'Probabilistic map', 'Probabilistic map',
'Reference delineations', // 'Reference delineations',
'Atlas of the short fiber bundles ', 'Atlas of the short fiber bundles ',
'Desikan-Killiany Atlas', 'Desikan-Killiany Atlas',
'GapMap', 'GapMap',
......
src/res/ext/bigbrain.json
+ 407
− 38
View file @ c9a9e2ec
...@@ -68,6 +68,15 @@ ...@@ -68,6 +68,15 @@
} }
} }
} }
],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "bfa7f344-016e-48da-bc34-9cd2f7f19148",
"format": {
"name": "3D interpolated map"
}
}
] ]
}, },
{ {
...@@ -92,7 +101,16 @@ ...@@ -92,7 +101,16 @@
"kgId": "e2969911-77eb-4b21-af70-216cab5285b1" "kgId": "e2969911-77eb-4b21-af70-216cab5285b1"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "49b5857e-7498-4fe9-8dbe-1cc0fa153091",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area TE 1.2 (HESCHL)", "name": "Area TE 1.2 (HESCHL)",
...@@ -116,7 +134,16 @@ ...@@ -116,7 +134,16 @@
"kgId": "677cd48c-70fa-4bbd-9f0a-ffdc7744bc0f" "kgId": "677cd48c-70fa-4bbd-9f0a-ffdc7744bc0f"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "57ace487-2266-43a2-ad04-597ede6400d8",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -145,7 +172,16 @@ ...@@ -145,7 +172,16 @@
"kgId": "7e1a3291-efdc-4ca6-a3d0-6c496c34639f" "kgId": "7e1a3291-efdc-4ca6-a3d0-6c496c34639f"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "45689ca2-df48-4260-a908-56a9d4eb344e",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -169,7 +205,16 @@ ...@@ -169,7 +205,16 @@
"kgId": "68784b66-ff15-4b09-b28a-a2146c0f8907" "kgId": "68784b66-ff15-4b09-b28a-a2146c0f8907"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "319f7185-736e-432f-a783-d0f5bb2f533b",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area STS2 (STS)", "name": "Area STS2 (STS)",
...@@ -188,7 +233,16 @@ ...@@ -188,7 +233,16 @@
"kgId": "278fc30f-2e24-4046-856b-95dfaf561635" "kgId": "278fc30f-2e24-4046-856b-95dfaf561635"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "298e8a4e-33ab-4c01-bd7f-9f9174a48604",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
} }
...@@ -216,7 +270,16 @@ ...@@ -216,7 +270,16 @@
"kgSchema": "minds/core/parcellationregion/v1.0.0", "kgSchema": "minds/core/parcellationregion/v1.0.0",
"kgId": "a802f3dc-b7e5-48b7-9845-832a6e6f9b1c" "kgId": "a802f3dc-b7e5-48b7-9845-832a6e6f9b1c"
} }
},
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "9ac6674e-2d6f-4831-ab25-8af17acca232",
"format": {
"name": "3D interpolated map"
}
} }
]
}, },
{ {
"name": "Area 6d2 (PreCG)", "name": "Area 6d2 (PreCG)",
...@@ -234,7 +297,16 @@ ...@@ -234,7 +297,16 @@
"kgSchema": "minds/core/parcellationregion/v1.0.0", "kgSchema": "minds/core/parcellationregion/v1.0.0",
"kgId": "963c5281-67df-4d41-9b91-60b31cf150c0" "kgId": "963c5281-67df-4d41-9b91-60b31cf150c0"
} }
},
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "c7647341-25de-4a1f-9302-fbe8932deda0",
"format": {
"name": "3D interpolated map"
}
} }
]
}, },
{ {
"name": "Area 6ma (preSMA, mesial SFG)", "name": "Area 6ma (preSMA, mesial SFG)",
...@@ -253,7 +325,16 @@ ...@@ -253,7 +325,16 @@
"kgId": "07b4c6a1-8a24-4f88-8f73-b2ea06e1c2f3" "kgId": "07b4c6a1-8a24-4f88-8f73-b2ea06e1c2f3"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "0e7d4830-9125-490b-bdf6-1840a5a99933",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area 6mp (SMA, mesial SFG)", "name": "Area 6mp (SMA, mesial SFG)",
...@@ -272,7 +353,16 @@ ...@@ -272,7 +353,16 @@
"kgId": "def99e8e-ce8f-4a62-bd5d-739948c4b010" "kgId": "def99e8e-ce8f-4a62-bd5d-739948c4b010"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
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{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "56022472-cfc5-47dc-8bd5-c58839b335cd",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -296,7 +386,16 @@ ...@@ -296,7 +386,16 @@
"kgId": "266c1ada-1840-462f-8223-7ff2df457552" "kgId": "266c1ada-1840-462f-8223-7ff2df457552"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "72bf4008-78a6-41e0-9337-61ec53c39c27",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -320,7 +419,16 @@ ...@@ -320,7 +419,16 @@
"kgId": "a6a83284-829b-4385-9f83-7f1bc832c5a5" "kgId": "a6a83284-829b-4385-9f83-7f1bc832c5a5"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "412a639b-63a6-448d-a387-272488458501",
"format": {
"name": "reference delineations"
}
}
]
}, },
{ {
"name": "Area ifj2 (IFS/PreCS)", "name": "Area ifj2 (IFS/PreCS)",
...@@ -332,6 +440,15 @@ ...@@ -332,6 +440,15 @@
-26787581, -26787581,
30975651, 30975651,
16855869 16855869
],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "5079e40f-7274-4348-9939-2a852644d230",
"format": {
"name": "reference delineations"
}
}
] ]
}, },
{ {
...@@ -351,7 +468,16 @@ ...@@ -351,7 +468,16 @@
"kgId": "d687d385-98d9-4b31-85db-4bc682cd0a31" "kgId": "d687d385-98d9-4b31-85db-4bc682cd0a31"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "ea4ce6db-9adf-4080-9d6d-c3d455673feb",
"format": {
"name": "reference delineations"
}
}
]
}, },
{ {
"name": "Area ifs2 (IFS)", "name": "Area ifs2 (IFS)",
...@@ -370,7 +496,16 @@ ...@@ -370,7 +496,16 @@
"kgId": "658a67d8-60c2-4bb4-8eaf-e54725eda261" "kgId": "658a67d8-60c2-4bb4-8eaf-e54725eda261"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
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{
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"kgId": "df2c8de3-370c-4fc0-b822-c7cf7268b4bc",
"format": {
"name": "reference delineations"
}
}
]
}, },
{ {
"name": "Area ifs3 (IFS)", "name": "Area ifs3 (IFS)",
...@@ -389,7 +524,16 @@ ...@@ -389,7 +524,16 @@
"kgId": "e555881e-7082-4ac0-b6cc-cd096f30d3dc" "kgId": "e555881e-7082-4ac0-b6cc-cd096f30d3dc"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "6290eaf9-69df-4c44-883a-678c0395b187",
"format": {
"name": "reference delineations"
}
}
]
}, },
{ {
"name": "Area ifs4 (IFS)", "name": "Area ifs4 (IFS)",
...@@ -408,7 +552,16 @@ ...@@ -408,7 +552,16 @@
"kgId": "472dacc9-c27d-49c2-9e6f-a1cc3309c4ab" "kgId": "472dacc9-c27d-49c2-9e6f-a1cc3309c4ab"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
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"kgId": "762b8ed5-8467-4bd6-ac3c-0aa0e1815cd3",
"format": {
"name": "reference delineations"
}
}
]
} }
] ]
} }
...@@ -442,7 +595,16 @@ ...@@ -442,7 +595,16 @@
"kgId": "030827d4-e0d1-4406-b71f-3f58dc2f9cca" "kgId": "030827d4-e0d1-4406-b71f-3f58dc2f9cca"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "cdd4e615-dfbf-4109-8042-8a20e6bcbf2e",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
} }
...@@ -471,7 +633,16 @@ ...@@ -471,7 +633,16 @@
"kgId": "5875bfe2-99ca-4e50-bce2-61c201c3dd54" "kgId": "5875bfe2-99ca-4e50-bce2-61c201c3dd54"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "2416cc4c-be1e-4b87-be2e-caf13abd453b",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area hIP5 (IPS)", "name": "Area hIP5 (IPS)",
...@@ -490,7 +661,16 @@ ...@@ -490,7 +661,16 @@
"kgId": "f9717dec-0310-4078-a4ae-294170b4fb37" "kgId": "f9717dec-0310-4078-a4ae-294170b4fb37"
} }
}, },
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{
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"kgId": "7ef95e2f-860f-4411-abfe-1b1d18458e3d",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area hIP6 (IPS)", "name": "Area hIP6 (IPS)",
...@@ -509,7 +689,16 @@ ...@@ -509,7 +689,16 @@
"kgId": "b9975f8e-f484-4e82-883a-5fd765855ae0" "kgId": "b9975f8e-f484-4e82-883a-5fd765855ae0"
} }
}, },
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{
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"kgId": "d7270c0b-9294-4cf9-addf-052be3a62da7",
"format": {
"name": "3D interpolated map"
}
}
]
}, },
{ {
"name": "Area hIP7 (IPS)", "name": "Area hIP7 (IPS)",
...@@ -528,7 +717,16 @@ ...@@ -528,7 +717,16 @@
"kgId": "9c6c3c96-8129-4e0e-aa22-a0fb435aab45" "kgId": "9c6c3c96-8129-4e0e-aa22-a0fb435aab45"
} }
}, },
"relatedAreas": [] "relatedAreas": [],
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{
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"kgId": "d3c4e8f8-d8b7-4cc8-8dfb-744dc41473f3",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -552,7 +750,16 @@ ...@@ -552,7 +750,16 @@
"kgId": "a78998c2-99d4-4738-bbda-82a317f713f1" "kgId": "a78998c2-99d4-4738-bbda-82a317f713f1"
} }
}, },
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{
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"kgId": "7dae93bd-cea1-44f6-ae5b-1992bb15a732",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
} }
...@@ -596,6 +803,15 @@ ...@@ -596,6 +803,15 @@
} }
} }
} }
],
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{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "696d6062-3b86-498f-9ca6-e4d67b433396",
"format": {
"name": "Full 3D map"
}
}
] ]
}, },
{ {
...@@ -620,7 +836,16 @@ ...@@ -620,7 +836,16 @@
"kgId": "04674a3c-bb3a-495e-a466-206355e630bd" "kgId": "04674a3c-bb3a-495e-a466-206355e630bd"
} }
}, },
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{
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"kgId": "63093617-9b72-45f5-88e6-f648ad05ae79",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "Area hOc3v (LingG)", "name": "Area hOc3v (LingG)",
...@@ -640,7 +865,16 @@ ...@@ -640,7 +865,16 @@
"kgId": "04674a3c-bb3a-495e-a466-206355e630bd" "kgId": "04674a3c-bb3a-495e-a466-206355e630bd"
} }
}, },
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{
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"kgId": "f746514d-b79a-48e2-9c07-39f7c62459cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "dorsal occipital cortex", "name": "dorsal occipital cortex",
...@@ -662,7 +896,16 @@ ...@@ -662,7 +896,16 @@
"kgId": "d72e0210-a910-4b15-bcaf-80c3433cd3e0" "kgId": "d72e0210-a910-4b15-bcaf-80c3433cd3e0"
} }
}, },
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{
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"kgId": "c8e23d85-909c-4efc-a2f4-fb3ed2a5c01f",
"format": {
"name": "3D interpolated map"
}
}
]
} }
] ]
}, },
...@@ -687,7 +930,16 @@ ...@@ -687,7 +930,16 @@
"kgId": "b40afb5a-e6a1-47b6-8a3e-1f8a20fbf99a" "kgId": "b40afb5a-e6a1-47b6-8a3e-1f8a20fbf99a"
} }
}, },
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{
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"kgId": "ea8fb74b-0ecc-4801-9522-b4c2cb2a2a5c",
"format": {
"name": "Full 3D map"
}
}
]
} }
] ]
} }
...@@ -732,7 +984,16 @@ ...@@ -732,7 +984,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
}, },
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{
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "LGB-lam2 (CGL, Metathalamus)", "name": "LGB-lam2 (CGL, Metathalamus)",
...@@ -752,7 +1013,16 @@ ...@@ -752,7 +1013,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
}, },
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{
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "LGB-lam3 (CGL, Metathalamus)", "name": "LGB-lam3 (CGL, Metathalamus)",
...@@ -772,7 +1042,16 @@ ...@@ -772,7 +1042,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "LGB-lam4 (CGL, Metathalamus)", "name": "LGB-lam4 (CGL, Metathalamus)",
...@@ -792,7 +1071,16 @@ ...@@ -792,7 +1071,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
}, },
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{
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "LGB-lam5 (CGL, Metathalamus)", "name": "LGB-lam5 (CGL, Metathalamus)",
...@@ -812,7 +1100,16 @@ ...@@ -812,7 +1100,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
}, },
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{
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
}, },
{ {
"name": "LGB-lam6 (CGL, Metathalamus)", "name": "LGB-lam6 (CGL, Metathalamus)",
...@@ -832,7 +1129,16 @@ ...@@ -832,7 +1129,16 @@
"kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8" "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
} }
}, },
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{
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"kgId": "d0c36f4a-91a8-4885-880d-f2896f5c54cf",
"format": {
"name": "Full 3D map"
}
}
]
} }
] ]
} }
...@@ -879,7 +1185,16 @@ ...@@ -879,7 +1185,16 @@
128, 128,
0 0
], ],
"children": [] "children": [],
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{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "cortical layer 2", "name": "cortical layer 2",
...@@ -889,7 +1204,16 @@ ...@@ -889,7 +1204,16 @@
190, 190,
190 190
], ],
"children": [] "children": [],
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{
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"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "cortical layer 3", "name": "cortical layer 3",
...@@ -899,7 +1223,16 @@ ...@@ -899,7 +1223,16 @@
215, 215,
180 180
], ],
"children": [] "children": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "cortical layer 4", "name": "cortical layer 4",
...@@ -909,7 +1242,16 @@ ...@@ -909,7 +1242,16 @@
250, 250,
200 200
], ],
"children": [] "children": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "cortical layer 5", "name": "cortical layer 5",
...@@ -919,7 +1261,16 @@ ...@@ -919,7 +1261,16 @@
128, 128,
128 128
], ],
"children": [] "children": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "cortical layer 6", "name": "cortical layer 6",
...@@ -929,7 +1280,16 @@ ...@@ -929,7 +1280,16 @@
190, 190,
255 255
], ],
"children": [] "children": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
}, },
{ {
"name": "Non-isocortical structures", "name": "Non-isocortical structures",
...@@ -939,7 +1299,16 @@ ...@@ -939,7 +1299,16 @@
255, 255,
255 255
], ],
"children": [] "children": [],
"originDatasets":[
{
"kgSchema": "minds/core/dataset/v1.0.0",
"kgId": "13e6ec48-4fec-4e9a-9bcf-45036d3c8ef9",
"format": {
"name": "Cortical layer"
}
}
]
} }
] ]
} }
......
src/ui/parcellationRegion/regionMenu/regionMenu.template.html
+ 8
− 2
View file @ c9a9e2ec
...@@ -23,9 +23,15 @@ ...@@ -23,9 +23,15 @@
<div *ngFor="let originDataset of (region.originDatasets || []); let index = index" <div *ngFor="let originDataset of (region.originDatasets || []); let index = index"
class="ml-2"> class="ml-2">
<i>&#183;</i> <i>&#183;</i>
<span *ngIf="originDataset?.format?.name as regionOrDsFormatName; else fallbackODsnameTmpl">
{{ regionOrDsFormatName }}
</span>
<ng-template #fallbackODsnameTmpl>
<span> <span>
{{ regionOriginDatasetLabels$ | async | renderViewOriginDatasetlabel : index }} {{ regionOriginDatasetLabels$ | async | renderViewOriginDatasetlabel : index }}
</span> </span>
</ng-template>
<span <span
aria-hidden="true" aria-hidden="true"
......
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