Merge pull request #538 from HumanBrainProject/stg_ibc_integration

Import IBC data

deploy/datasets/importIBS.js

+const fs = require('fs')
+const path = require('path')
+const julichBrainNameToNexusId = require('./supplements/data/julich_brain_name_to_nexusid')
+
+
+const IBC_DATA_DIR = path.join(__dirname, './supplements/data/ibc/')
+const IBC_SCHEMA = '//ibc/ibc_schema'
+
+
+const getIBCData = () => {
+  const ibcData = []
+
+  const files = fs.readdirSync(IBC_DATA_DIR)
+  files.forEach((file) => {
+    ibcData.push(getIbcDatasetByFileName(file))
+  })
+
+  return ibcData
+}
+
+const getIbcDatasetByFileName = (file) => {
+  const str = fs.readFileSync(path.join(IBC_DATA_DIR, file), "utf8");
+
+  const name = str.substring(2, str.indexOf('The Individual Brain Charting dataset is'))
+  const kgUrl = str.substring(str.indexOf('Knowledge Graph: https://'), str.indexOf('Following are the'))
+  const kgReference = [kgUrl.substring(kgUrl.indexOf('https'), kgUrl.length)]
+  const description = str.substring(str.indexOf('The Individual Brain Charting')).replace(/:-:/g, '---')
+
+  const region = julichBrainNameToNexusId.find(r => r[0] && name.includes(r[0]))
+  const regionFullId = (region && region[1] && region[1].kg) ? `https://nexus.humanbrainproject.org/v0/data/${region[1].kg.kgSchema}/${region[1].kg.kgId}` : null
+
+  return {
+    name,
+    kgReference,
+    description,
+    methods: ['functional magnetic resonance imaging (fMRI)'],
+    species: ['Homo sapiens'],
+    fullId: `https://ibc/ibc_schema/${file}`,
+    kgId: file,
+    kgSchema: '//ibc/ibc_schema',
+    referenceSpaces: [
+      {
+        "name": null,
+        "fullId": "https://nexus.humanbrainproject.org/v0/data/minds/core/referencespace/v1.0.0/dafcffc5-4826-4bf1-8ff6-46b8a31ff8e2"
+      },
+      {
+        "name": "MNI Colin 27",
+        "fullId": "https://nexus.humanbrainproject.org/v0/data/minds/core/referencespace/v1.0.0/7f39f7be-445b-47c0-9791-e971c0b6d992"
+      }
+    ],
+    parcellationAtlas: [
+      {
+        name: 'Jülich Cytoarchitechtonic Brain Atlas (human)',
+        fullId:
+          'https://nexus.humanbrainproject.org/v0/data/minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579',
+      }],
+    parcellationRegion: [
+      {
+        species: [],
+        name: region[0],
+        alias: null,
+        fullId: regionFullId
+      }
+    ],
+  }
+}
+
+module.exports = {
+  getIBCData,
+  getIbcDatasetByFileName,
+  IBC_SCHEMA: IBC_SCHEMA
+}

deploy/datasets/importIBS.spec.js

+const ibc = require('./importIBS')
+const { expect } = require('chai')
+const expectedIBCData = require('./testData/ibcDataExpected')
+
+describe('datasets/data/importIBC.js', () => {
+  describe('Get Dataset object from markdown', () => {
+    it('dataset name valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData.name).to.be.equal(ibcData.name)
+    })
+    it('dataset description valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData.description).to.be.equal(ibcData.description)
+    })
+    it('dataset reference valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData.kgReference[0]).to.be.equal(ibcData.kgReference[0])
+    })
+    it('dataset fullId valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData.fullId).to.be.equal(ibcData.fullId)
+    })
+    it('dataset region valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData.parcellationRegion[0]).to.be.eql(ibcData.parcellationRegion[0])
+    })
+    it('dataset valid', () => {
+      const ibcData = ibc.getIbcDatasetByFileName('left_AIPS_IP1.md')
+      expect(expectedIBCData).to.be.eql(ibcData)
+    })
+  })
+})

deploy/datasets/index.js

@@ -2,12 +2,13 @@ const express = require('express')
 const path = require('path')
 const fs = require('fs')
 const datasetsRouter = express.Router()
-const { init, getDatasets, getPreview, getDatasetFromId, getDatasetFileAsZip, getTos, hasPreview } = require('./query')
+const { init, getDatasets, getPreview, getDatasetFromId, getExternalSchemaDatasets, getDatasetFileAsZip, getTos, hasPreview } = require('./query')
 const { retry } = require('./util')
 const url = require('url')
 const qs = require('querystring')
 const archiver = require('archiver')
 const { getHandleErrorFn } = require('../util/streamHandleError')
+const { IBC_SCHEMA } = require('./importIBS')
 
 const bodyParser = require('body-parser')
 
@@ -56,7 +57,7 @@ datasetsRouter.use('/spatialSearch', noCacheMiddleWare, require('./spatialRouter
 
 datasetsRouter.get('/templateNameParcellationName/:templateName/:parcellationName', noCacheMiddleWare, (req, res, next) => {
   const { templateName, parcellationName } = req.params
-  
+
   const { user } = req
   getDatasets({ templateName, parcellationName, user })
     .then(ds => {
@@ -80,13 +81,13 @@ datasetsRouter.get('/templateName/:templateName', deprecatedNotice)
 datasetsRouter.get('/parcellationName/:parcellationName', deprecatedNotice)
 
 /**
- * It appears that query param are not 
+ * It appears that query param are not
  */
 datasetsRouter.get('/preview/:datasetName', getVary(['referer']), cacheMaxAge24Hr, (req, res, next) => {
   const { datasetName } = req.params
   const ref = url.parse(req.headers.referer)
   const { templateSelected, parcellationSelected } = qs.parse(ref.query)
-  
+
   getPreview({ datasetName, templateSelected })
     .then(preview => {
       if (preview) {
@@ -139,7 +140,7 @@ datasetsRouter.get('/previewFile', cacheMaxAge24Hr, (req, res) => {
   // for now, just serve non encoded image
 
   res.removeHeader('Content-Encoding')
-  
+
   if (filePath) {
     fs.createReadStream(filePath).pipe(res).on('error', getHandleErrorFn(req, res))
   } else {
@@ -147,9 +148,14 @@ datasetsRouter.get('/previewFile', cacheMaxAge24Hr, (req, res) => {
   }
 })
 
+const kgExternalDatasetSchemas = [
+  IBC_SCHEMA,
+  // Add more here...
+]
+
 const checkKgQuery = (req, res, next) => {
   const { kgSchema } = req.query
-  if (kgSchema !== 'minds/core/dataset/v1.0.0') return res.status(400).send('Only kgSchema is required and the only accepted value is minds/core/dataset/v1.0.0')
+  if (kgSchema !== 'minds/core/dataset/v1.0.0' && !kgExternalDatasetSchemas.includes(kgSchema)) return res.status(400).send('Only kgSchema is required and the only accepted value is minds/core/dataset/v1.0.0')
   else return next()
 }
 
@@ -164,10 +170,16 @@ datasetsRouter.get('/hasPreview', cacheMaxAge24Hr, async (req, res) => {
 
 datasetsRouter.get('/kgInfo', checkKgQuery, cacheMaxAge24Hr, async (req, res) => {
   const { kgId } = req.query
+  const { kgSchema } = req.query
   const { user } = req
   try{
-    const stream = await getDatasetFromId({ user, kgId, returnAsStream: true })
-    stream.on('error', getHandleErrorFn(req, res)).pipe(res)
+    if (kgSchema === 'minds/core/dataset/v1.0.0') {
+      const stream = await getDatasetFromId({user, kgId, returnAsStream: true})
+      stream.on('error', getHandleErrorFn(req, res)).pipe(res)
+    } else {
+      const data = getExternalSchemaDatasets(kgId, kgSchema)
+      res.status(200).send(data)
+    }
   }catch(e){
     getHandleErrorFn(req, res)(e)
   }
@@ -217,4 +229,4 @@ datasetsRouter.post('/bulkDownloadKgFiles', bodyParser.urlencoded({ extended: fa
   }
 })
 
-module.exports = datasetsRouter
\ No newline at end of file
+module.exports = datasetsRouter

deploy/datasets/query.js

@@ -5,6 +5,7 @@ const path = require('path')
 const archiver = require('archiver')
 const { getPreviewFile, hasPreview } = require('./supplements/previewFile')
 const { constants, init: kgQueryUtilInit, getUserKGRequestParam, filterDatasets } = require('./util')
+const ibc = require('./importIBS')
 
 let cachedData = null
 
@@ -104,13 +105,19 @@ const getPublicDs = async () => {
   if (cachedData) return Promise.resolve(cachedData)
   if (getPublicDsPr) return getPublicDsPr
   throw `cached Data not yet resolved, neither is get public ds defined`
-} 
+}
 
 
 const getDs = ({ user }) => user
   ? fetchDatasetFromKg({ user }).then(({ results }) => results)
   : getPublicDs()
 
+const getExternalSchemaDatasets = (kgId, kgSchema) => {
+  if (kgSchema === ibc.IBC_SCHEMA) {
+    return ibc.getIbcDatasetByFileName(kgId)
+  }
+}
+
 /**
  * on init, populate the cached data
  */
@@ -119,8 +126,21 @@ const init = async () => {
   return await getPublicDs()
 }
 
-const getDatasets = ({ templateName, parcellationName, user }) => getDs({ user })
-  .then(json => filterDatasets(json, { templateName, parcellationName }))
+const getDatasets = ({ templateName, parcellationName, user }) => {
+  // Get Local datasets
+  const localDatasets = [
+    ...ibc.getIBCData(),
+    // ... Add more dataset sources here
+  ]
+
+  // Get all datasets and merge local ones
+  return getDs({ user })
+    .then(json => {
+      // console.log(json.map(j=> j.parcellationRegion))
+      json = [...json, ...localDatasets]
+      return filterDatasets(json, { templateName, parcellationName })
+    })
+}
 
 const getPreview = ({ datasetName, templateSelected }) => getPreviewFile({ datasetName, templateSelected })
 
@@ -195,7 +215,7 @@ const getDatasetFileAsZip = async ({ user, kgId } = {}) => {
    */
   for (let file of files) {
     const { name, absolutePath } = file
-    zip.append(request(absolutePath), { 
+    zip.append(request(absolutePath), {
       name: path.join(datasetName, name)
     })
   }
@@ -212,6 +232,7 @@ module.exports = {
   getDatasets,
   getPreview,
   hasPreview,
-  getTos
+  getTos,
+  getExternalSchemaDatasets
 }
 

deploy/datasets/supplements/data/ibc/left_AIPS_IP1.md

+# Individual Brain Charting fMRI datasets with strong activation in Area hIP1 (IPS) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area hIP1 (IPS) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-05 | ses-04 | task-archi_emotional_dir-ap_face_trusty|
+| sub-05 | ses-04 | dir-ap_face_trusty|
+| sub-07 | ses-11 | sn_before-after_event|
+| sub-07 | ses-04 | dir-ap_reading-checkerboard|
+| sub-07 | ses-04 | task-archi_standard_dir-ap_reading-checkerboard|
+| sub-06 | ses-01 | task-hcp_gambling_dir-ap_punishment-reward|
+| sub-06 | ses-01 | dir-ap_punishment-reward|
+| sub-07 | ses-12 | task-mtt_we_dir-ap_run-03_we_before-after_event|
+| sub-07 | ses-12 | dir-ap_run-03_we_before-after_event|
+| sub-07 | ses-12 | we_before-after_event|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_AIPS_IP2.md

+# Individual Brain Charting fMRI datasets with strong activation in Area hIP2 (IPS) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area hIP2 (IPS) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-06 | ses-01 | task-hcp_gambling_dir-ap_punishment-reward|
+| sub-06 | ses-01 | dir-ap_punishment-reward|
+| sub-07 | ses-04 | grasp-orientation|
+| sub-07 | ses-04 | dir-ffx_grasp-orientation|
+| sub-07 | ses-04 | task-archi_spatial_ffx_grasp-orientation|
+| sub-15 | ses-01 | dir-ap_object_grasp|
+| sub-15 | ses-01 | task-archi_spatial_dir-ap_object_grasp|
+| sub-15 | ses-01 | task-archi_spatial_dir-ap_object_orientation|
+| sub-15 | ses-01 | dir-ap_object_orientation|
+| sub-13 | ses-04 | task-archi_standard_dir-pa_computation-sentences|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_AIPS_IP3.md

+# Individual Brain Charting fMRI datasets with strong activation in Area hIP3 (IPS) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area hIP3 (IPS) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-01 | ses-07 | dir-pa_rotation_hand|
+| sub-01 | ses-07 | task-archi_spatial_dir-pa_rotation_hand|
+| sub-01 | ses-07 | task-archi_standard_ffx_video_computation|
+| sub-01 | ses-07 | dir-ffx_video_computation|
+| sub-01 | ses-07 | video_computation|
+| sub-12 | ses-16 | dir-ffx_painting_linear|
+| sub-12 | ses-16 | task-preference_paintings_ffx_painting_linear|
+| sub-12 | ses-16 | painting_linear|
+| sub-01 | ses-07 | task-archi_standard_dir-ap_video_computation|
+| sub-01 | ses-07 | dir-ap_video_computation|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_CM.md

+# Individual Brain Charting fMRI datasets with strong activation in CM (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in CM (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-05 | ses-04 | task-archi_social_dir-ap_triangle_mental|
+| sub-05 | ses-04 | dir-ap_triangle_mental|
+| sub-06 | ses-04 | task-archi_social_dir-ap_false_belief-mechanistic_video|
+| sub-06 | ses-04 | dir-ap_false_belief-mechanistic_video|
+| sub-15 | ses-14 | task-mtt_we_dir-pa_run-01_eastside-westside_event|
+| sub-15 | ses-14 | dir-pa_run-01_eastside-westside_event|
+| sub-07 | ses-03 | dir-pa_run-00_jabberwocky-pseudo|
+| sub-07 | ses-03 | task-rsvp_language_dir-pa_run-00_jabberwocky-pseudo|
+| sub-08 | ses-04 | dir-ap_run-05_probe|
+| sub-08 | ses-04 | task-rsvp_language_dir-ap_run-05_probe|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_IF.md

+# Individual Brain Charting fMRI datasets with strong activation in IF (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in IF (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-15 | ses-14 | task-mtt_we_dir-pa_run-01_eastside-westside_event|
+| sub-15 | ses-14 | dir-pa_run-01_eastside-westside_event|
+| sub-06 | ses-11 | dir-pa_run-02_we_before-after_event|
+| sub-06 | ses-11 | task-mtt_we_dir-pa_run-02_we_before-after_event|
+| sub-06 | ses-04 | task-archi_standard_dir-ap_horizontal-vertical|
+| sub-06 | ses-04 | dir-ap_horizontal-vertical|
+| sub-07 | ses-03 | dir-pa_run-00_jabberwocky-pseudo|
+| sub-07 | ses-03 | task-rsvp_language_dir-pa_run-00_jabberwocky-pseudo|
+| sub-08 | ses-11 | task-mtt_we_dir-pa_run-02_we_all_time-space_cue|
+| sub-08 | ses-11 | dir-pa_run-02_we_all_time-space_cue|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_LB.md

+# Individual Brain Charting fMRI datasets with strong activation in LB (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in LB (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-08 | ses-11 | task-mtt_we_dir-pa_run-02_we_all_time-space_cue|
+| sub-08 | ses-11 | dir-pa_run-02_we_all_time-space_cue|
+| sub-06 | ses-04 | task-archi_standard_dir-ap_horizontal-vertical|
+| sub-06 | ses-04 | dir-ap_horizontal-vertical|
+| sub-09 | ses-05 | task-archi_standard_dir-pa_left-right_button_press|
+| sub-09 | ses-05 | dir-pa_left-right_button_press|
+| sub-12 | ses-16 | task-preference_paintings_dir-pa_painting_linear|
+| sub-12 | ses-16 | dir-pa_painting_linear|
+| sub-06 | ses-11 | dir-pa_run-02_we_before-after_event|
+| sub-06 | ses-11 | task-mtt_we_dir-pa_run-02_we_before-after_event|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_MF.md

+# Individual Brain Charting fMRI datasets with strong activation in MF (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in MF (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-07 | ses-03 | dir-pa_run-00_jabberwocky-pseudo|
+| sub-07 | ses-03 | task-rsvp_language_dir-pa_run-00_jabberwocky-pseudo|
+| sub-06 | ses-04 | task-archi_social_dir-ap_false_belief-mechanistic_video|
+| sub-06 | ses-04 | dir-ap_false_belief-mechanistic_video|
+| sub-05 | ses-04 | task-archi_social_dir-ap_triangle_mental|
+| sub-05 | ses-04 | dir-ap_triangle_mental|
+| sub-05 | ses-04 | task-archi_emotional_dir-ap_expression_intention-gender|
+| sub-05 | ses-04 | dir-ap_expression_intention-gender|
+| sub-05 | ses-00 | task-archi_standard_dir-pa_left-right_button_press|
+| sub-05 | ses-00 | dir-pa_left-right_button_press|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_SF.md

+# Individual Brain Charting fMRI datasets with strong activation in SF (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in SF (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-07 | ses-11 | dir-pa_run-01_northside-southside_event|
+| sub-07 | ses-11 | task-mtt_sn_dir-pa_run-01_northside-southside_event|
+| sub-07 | ses-11 | dir-ap_run-03_southside-northside_event|
+| sub-07 | ses-11 | task-mtt_sn_dir-ap_run-03_southside-northside_event|
+| sub-05 | ses-20 | task-self_dir-pa_run-01_encode_self-other|
+| sub-05 | ses-20 | dir-pa_run-01_encode_self-other|
+| sub-12 | ses-16 | task-preference_paintings_dir-pa_painting_linear|
+| sub-12 | ses-16 | dir-pa_painting_linear|
+| sub-12 | ses-03 | dir-ap_triangle_mental-random|
+| sub-12 | ses-03 | task-archi_social_dir-ap_triangle_mental-random|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Amygdala_VTM.md

+# Individual Brain Charting fMRI datasets with strong activation in VTM (Amygdala) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in VTM (Amygdala) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-06 | ses-11 | dir-pa_run-02_we_before-after_event|
+| sub-06 | ses-11 | task-mtt_we_dir-pa_run-02_we_before-after_event|
+| sub-08 | ses-04 | dir-ap_run-05_probe|
+| sub-08 | ses-04 | task-rsvp_language_dir-ap_run-05_probe|
+| sub-07 | ses-11 | task-mtt_sn_dir-ap_run-03_sn_all_space-time_cue|
+| sub-07 | ses-11 | dir-ap_run-03_sn_all_space-time_cue|
+| sub-05 | ses-04 | task-archi_emotional_dir-ap_expression_intention-gender|
+| sub-05 | ses-04 | dir-ap_expression_intention-gender|
+| sub-01 | ses-04 | 2back_body|
+| sub-12 | ses-00 | task-archi_standard_dir-ap_computation|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Auditory_Te10.md

+# Individual Brain Charting fMRI datasets with strong activation in Area TE 1.0 (HESCHL) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area TE 1.0 (HESCHL) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-02 | ses-01 | dir-ffx_mechanistic_audio|
+| sub-02 | ses-01 | task-archi_social_ffx_mechanistic_audio|
+| sub-02 | ses-01 | mechanistic_audio|
+| sub-09 | ses-02 | 0back-2back|
+| sub-02 | ses-01 | task-archi_social_dir-pa_mechanistic_audio|
+| sub-09 | ses-02 | task-hcp_wm_ffx_0back-2back|
+| sub-09 | ses-02 | dir-ffx_0back-2back|
+| sub-02 | ses-01 | dir-pa_mechanistic_audio|
+| sub-02 | ses-01 | dir-ap_false_belief_audio|
+| sub-02 | ses-01 | task-archi_social_dir-ap_false_belief_audio|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Auditory_Te11.md

+# Individual Brain Charting fMRI datasets with strong activation in Area TE 1.1 (HESCHL) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area TE 1.1 (HESCHL) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-09 | ses-17 | task-pain_movie_dir-ap_movie_pain|
+| sub-09 | ses-17 | dir-ap_movie_pain|
+| sub-02 | ses-01 | listening-reading|
+| sub-02 | ses-00 | task-archi_social_dir-ap_non_speech_sound|
+| sub-02 | ses-00 | dir-ap_false_belief_audio|
+| sub-02 | ses-01 | task-archi_standard_ffx_listening-reading|
+| sub-02 | ses-01 | non_speech_sound|
+| sub-02 | ses-01 | dir-ffx_non_speech_sound|
+| sub-02 | ses-00 | dir-ap_non_speech_sound|
+| sub-02 | ses-01 | task-archi_social_ffx_non_speech_sound|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Auditory_Te12.md

+# Individual Brain Charting fMRI datasets with strong activation in Area TE 1.2 (HESCHL) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area TE 1.2 (HESCHL) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-08 | ses-00 | dir-pa_audio_right_button_press|
+| sub-08 | ses-00 | task-archi_standard_dir-pa_audio_right_button_press|
+| sub-02 | ses-00 | dir-pa_speech-non_speech|
+| sub-02 | ses-00 | task-archi_social_dir-pa_speech-non_speech|
+| sub-02 | ses-01 | speech-non_speech|
+| sub-02 | ses-01 | task-archi_social_ffx_speech-non_speech|
+| sub-02 | ses-01 | dir-ffx_speech-non_speech|
+| sub-02 | ses-01 | dir-pa_speech-non_speech|
+| sub-02 | ses-01 | task-archi_social_dir-pa_speech-non_speech|
+| sub-05 | ses-00 | dir-ap_audio_left_button_press|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Bforebrain_123.md

+# Individual Brain Charting fMRI datasets with strong activation in Ch 123 (Basal Forebrain) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Ch 123 (Basal Forebrain) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-06 | ses-12 | task-mtt_sn_dir-pa_run-01_sn_time-space_event|
+| sub-06 | ses-12 | dir-pa_run-01_sn_time-space_event|
+| sub-09 | ses-04 | dir-pa_run-00_word-pseudo|
+| sub-09 | ses-04 | task-rsvp_language_dir-pa_run-00_word-pseudo|
+| sub-06 | ses-12 | dir-pa_run-02_sn_after-before_event|
+| sub-06 | ses-12 | task-mtt_sn_dir-pa_run-02_sn_after-before_event|
+| sub-04 | ses-16 | task-theory_of_mind_dir-ap_belief|
+| sub-04 | ses-16 | dir-ap_belief|
+| sub-01 | ses-04 | 2back_body|
+| sub-12 | ses-00 | task-archi_standard_dir-ap_computation|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Bforebrain_4.md

+# Individual Brain Charting fMRI datasets with strong activation in Ch 4 (Basal Forebrain) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Ch 4 (Basal Forebrain) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-05 | ses-04 | task-archi_social_dir-ap_triangle_mental|
+| sub-05 | ses-04 | dir-ap_triangle_mental|
+| sub-06 | ses-04 | task-archi_social_dir-ap_false_belief-mechanistic_video|
+| sub-06 | ses-04 | dir-ap_false_belief-mechanistic_video|
+| sub-07 | ses-03 | dir-pa_run-00_jabberwocky-pseudo|
+| sub-07 | ses-03 | task-rsvp_language_dir-pa_run-00_jabberwocky-pseudo|
+| sub-15 | ses-14 | task-mtt_we_dir-pa_run-01_eastside-westside_event|
+| sub-15 | ses-14 | dir-pa_run-01_eastside-westside_event|
+| sub-11 | ses-05 | task-archi_emotional_dir-ap_face_gender-control|
+| sub-11 | ses-05 | dir-ap_face_gender-control|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Broca_44.md

+# Individual Brain Charting fMRI datasets with strong activation in Area 44 (IFG) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area 44 (IFG) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-02 | ses-06 | dir-pa_run-02_sentence-jabberwocky|
+| sub-02 | ses-06 | task-rsvp_language_dir-pa_run-02_sentence-jabberwocky|
+| sub-13 | ses-04 | dir-ffx_reading-checkerboard|
+| sub-13 | ses-04 | task-archi_standard_ffx_reading-checkerboard|
+| sub-13 | ses-04 | reading-checkerboard|
+| sub-15 | ses-01 | task-archi_emotional_dir-pa_trusty_and_intention-gender|
+| sub-15 | ses-01 | dir-pa_trusty_and_intention-gender|
+| sub-13 | ses-00 | task-archi_standard_dir-pa_video_computation|
+| sub-13 | ses-00 | dir-pa_video_computation|
+| sub-01 | ses-07 | task-archi_emotional_dir-pa_expression_intention-gender|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file

deploy/datasets/supplements/data/ibc/left_Broca_45.md

+# Individual Brain Charting fMRI datasets with strong activation in Area 45 (IFG) of the left hemisphere
+
+The Individual Brain Charting dataset is a high spatial-resolution, multi-task, functional Magnetic Resonance Imaging dataset, intended to support the investigation on the functional principles governing cognition in the human brain.
+Read more in the Knowledge Graph: https://kg.ebrains.eu/search/instances/Dataset/a1c940cc-4777-417e-9326-dd6584d6c71f
+
+Following are the 10 measurements with the strongest activation in Area 45 (IFG) of the left hemisphere:
+
+| Subject ID | Session ID | Task |
+| :-: | :-: | :-: |
+| sub-09 | ses-04 | dir-pa_run-01_complex-consonant_string|
+| sub-09 | ses-04 | task-rsvp_language_dir-pa_run-01_complex-consonant_string|
+| sub-11 | ses-00 | task-archi_standard_ffx_cognitive-motor|
+| sub-11 | ses-00 | cognitive-motor|
+| sub-11 | ses-00 | task-archi_standard_dir-pa_cognitive-motor|
+| sub-11 | ses-00 | dir-pa_cognitive-motor|
+| sub-11 | ses-00 | dir-ffx_cognitive-motor|
+| sub-05 | ses-03 | dir-pa_run-02_word-pseudo|
+| sub-05 | ses-03 | task-rsvp_language_dir-pa_run-02_word-pseudo|
+| sub-14 | ses-01 | dir-ap_expression_intention-gender|
+
+
+The Individual Brain Charting Dataset is currently under GDPR review. Once the review is completed, we will provide direct links to these files here.
\ No newline at end of file