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Commit 1efd2d0f authored by Xiao Gui's avatar Xiao Gui
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temporarily restore julichbrainv2.4 for ieeg visualisation

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src/res/ext/MNI152.json
+ 13833
− 2
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src/res/ext/MNI152NehubaConfig.json
+ 68
− 0
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......@@ -279,6 +279,74 @@
]
]
},
"ICBM152_V24_LEFT_NG": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.eu/precomputed/data-repo/20201002_JulichBrain-V2_4-ICBM152_MPM_mesh/precomputed/left",
"transform": [
[
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],
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],
[
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"_":{
"@src": "https://gin.g-node.org/FZJ-INM1-BDA/20201002_JulichBrain-V2_4-ICBM152_MPM_mesh/src/a282b9077713c0a0fe8abd1cf695bd3490cf9fbb/output/nehuba-ui/left_config.json"
}
},
"ICBM152_V24_RIGHT_NG": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.eu/precomputed/data-repo/20201002_JulichBrain-V2_4-ICBM152_MPM_mesh/precomputed/right",
"transform": [
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],
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],
"_": {
"@src": "https://gin.g-node.org/FZJ-INM1-BDA/20201002_JulichBrain-V2_4-ICBM152_MPM_mesh/src/a282b9077713c0a0fe8abd1cf695bd3490cf9fbb/output/nehuba-ui/right_config.json"
}
},
"fibre bundle long": {
"type": "segmentation",
"source": "precomputed://https://neuroglancer.humanbrainproject.org/precomputed/Fiber_Bundle/long-bundles_maxprob",
......
src/res/ext/atlas/atlas_multiLevelHuman.json
+ 39
− 4
View file @ 1efd2d0f
......@@ -8,9 +8,13 @@
"name": "MNI 152 ICBM 2009c Nonlinear Asymmetric",
"displayName": "ICBM 152 2009c Nonlinear Asymmetric",
"availableIn": [
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579-25",
"name": "Cytoarchitectonic maps - v2.5"
},
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"name": "Cytoarchitectonic maps"
"name": "Cytoarchitectonic maps - v2.4"
},
{
"@id": "juelich/iav/atlas/v1.0.0/8",
......@@ -55,9 +59,13 @@
"@id": "minds/core/referencespace/v1.0.0/7f39f7be-445b-47c0-9791-e971c0b6d992",
"name": "MNI Colin 27",
"availableIn": [
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579-25",
"name": "Cytoarchitectonic maps - v2.5"
},
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"name": "Cytoarchitectonic maps"
"name": "Cytoarchitectonic maps - v2.4"
},
{
"@id": "juelich/iav/atlas/v1.0.0/8",
......@@ -114,7 +122,7 @@
},
{
"@id": "juelich/iav/atlas/v1.0.0/7",
"name": "Cytoarchitectonic maps - v2.5",
"name": "Cytoarchitectonic maps - v2.4",
"baseLayer": true,
"@version": {
"@next": null,
......@@ -130,13 +138,40 @@
]
},
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579-25",
"name": "Cytoarchitectonic maps",
"baseLayer": true,
"@version": {
"@next": null,
"@this": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"name": "v2.5",
"@previous": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579"
},
"availableIn": [
{
"@id": "minds/core/referencespace/v1.0.0/dafcffc5-4826-4bf1-8ff6-46b8a31ff8e2",
"name": "MNI 152 ICBM 2009c Nonlinear Asymmetric",
"originalDatasetFormats": [{
"name": "probability map"
}]
},
{
"@id": "minds/core/referencespace/v1.0.0/7f39f7be-445b-47c0-9791-e971c0b6d992",
"name": "MNI Colin 27",
"originalDatasetFormats": [{
"name": "probability map"
}]
}
]
},
{
"@id": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"name": "Cytoarchitectonic maps",
"baseLayer": true,
"@version": {
"@next": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579-25",
"@this": "minds/core/parcellationatlas/v1.0.0/94c1125b-b87e-45e4-901c-00daee7f2579",
"name": "v2.4",
"@previous": "juelich/iav/atlas/v1.0.0/8"
},
"availableIn": [
......
src/res/ext/bigbrain.json
+ 1
− 1
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......@@ -17,7 +17,7 @@
{
"@id": "juelich/iav/atlas/v1.0.0/7",
"fullId": "juelich/iav/atlas/v1.0.0/7",
"name": "Cytoarchitectonic Maps - v2.5",
"name": "Cytoarchitectonic Maps - v2.4",
"displayName": "Cytoarchitectonic Maps",
"properties": {
"name": "Cytoarchitectonic Maps",
......
src/res/ext/colin.json
+ 13833
− 2
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src/res/ext/colinNehubaConfig.json
+ 68
− 0
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......@@ -155,6 +155,74 @@
"@src": "https://gin.g-node.org/FZJ-INM1-BDA/20200926_JulichBrain-V2_4-Colin_MPM_mesh/raw/745a37f64b6995a661f5a61287b4067df01687cb/output/nehuba-ui/right_config.json"
}
},
"COLIN_V24_LEFT_NG": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.eu/precomputed/data-repo/20200926_JulichBrain-V2_4-Colin_MPM_mesh/precomputed/left",
"transform": [
[
1,
0,
0,
-128500000
],
[
0,
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-148500000
],
[
0,
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1,
-110500000
],
[
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]
],
"_": {
"@src": "https://gin.g-node.org/FZJ-INM1-BDA/20200926_JulichBrain-V2_4-Colin_MPM_mesh/raw/745a37f64b6995a661f5a61287b4067df01687cb/output/nehuba-ui/left_config.json"
}
},
"COLIN_V24_RIGHT_NG": {
"type": "segmentation",
"visible": true,
"source": "precomputed://https://neuroglancer.humanbrainproject.eu/precomputed/data-repo/20200926_JulichBrain-V2_4-Colin_MPM_mesh/precomputed/right",
"transform": [
[
1,
0,
0,
-128500000
],
[
0,
1,
0,
-148500000
],
[
0,
0,
1,
-110500000
],
[
0,
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0,
1
]
],
"_": {
"@src": "https://gin.g-node.org/FZJ-INM1-BDA/20200926_JulichBrain-V2_4-Colin_MPM_mesh/raw/745a37f64b6995a661f5a61287b4067df01687cb/output/nehuba-ui/right_config.json"
}
},
"jubrain colin v18 left": {
"type": "segmentation",
"visible": true,
......
src/services/effect/effect.spec.ts
+ 1
− 1
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......@@ -10,7 +10,7 @@ import { defaultRootState } from '../stateStore.service'
const colinsJson = require('!json-loader!../../res/ext/colin.json')
const COLIN_JULICHBRAIN_LAYER_NAME = `COLIN_V25_LEFT_NG`
const COLIN_JULICHBRAIN_LAYER_NAME = `COLIN_V24_LEFT_NG`
describe('effect.ts', () => {
describe('getGetRegionFromLabelIndexId', () => {
......
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