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Commit 59ebff41 authored by Michael Denker's avatar Michael Denker
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Start of Cobrawap wrapping

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#!/usr/bin/env cwl-runner
cwlVersion: v1.2
class: CommandLineTool
baseCommand: python hilbert_phase.py
stdout: o.txt
stderr: e.txt
hints:
DockerRequirement:
dockerImageId: docker-registry.ebrains.eu/workflow-components/cobrawap
doc:
- "Detect trigger times (i.e., state transition / local wavefronts onsets) by finding crossing of a set phase-value in the channel signals."
- "Functionality is provided via Stage 3 of the Cobrawap pipeline"
label: cobrawap-hilbert-phase
# requirements:
# - class: DockerRequirement
# dockerOutputDirectory: "/home/denker/tmpdoc"
# dockerPull: docker-registry.ebrains.eu/workflow-components/bluepyefe
# The inputs for this process.
inputs:
input_file_current:
type: File
label: "This is the input file, which must be a Nix file containing a Neo Block."
inputBinding:
position: 1
prefix: --data
#...
outputs:
output_statistics:
type: File
outputBinding:
# glob: "*.json"
glob: "$(inputs.output_file)"
output_stdout:
type: stdout
output_stderr:
type: stderr
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