Tags

1.5.6 (January 22, 2020)

Bug-fix release in the 1.5.x series.

* FIX: Include all functional runs in reports, establish consistent ordering (#1937)
* FIX: Use SyN-SDC if --use-syn-sdc and --ignore fieldmaps are used (#1942)

1.5.5 (January 14, 2019)

Bug-fix release in the 1.5.x series.

* FIX: Correctly select volumetric spaces for carpetplot (#1932) @effigies
* FIX: Constrain setuptools for Python 2.7 installs of fmriprep-docker (#1933) @effigies

fMRIPrep 1.5.3 (December 12, 2019)

The last bug fix release of the 1.5.x series.

* FIX: Do not run STC if SliceTiming metadata is set but empty (#1854) @oesteban
* FIX: Link to EPINorm issue in README (#1903) @adelavega
* FIX: Respect --dummy-scans 0 (#1908) @jdkent
* ENH: Upgrade SDCFlows to new API (1.0.0) (#1886) @oesteban
* ENH: Add --fs-subjects-dir flag (#1901) @effigies
* DOC: Improving accessibility of confounds description (#1877) @kfinc
* MAINT: Ensure data is packaged in sdist (#1902) @effigies
* MAINT: Remove deprecated command-line arguments (#1909) @mgxd

1.5.2 (December 2, 2019)

Bug-fix release in the 1.5.x series.

* FIX: Ensure data type of masked image matches T1.mgz (poldracklab/niworkflows#430) @effigies

1.5.0rc2 (August 23, 2019)

Two hallmark changes conducive to a new minor release line have been included in
version 1.5.0: the upgrade of *PyBIDS* to the 0.9 series and the split of *SDCflows*
off from *fMRIPrep* codebase.
*PyBIDS* 0.9.x has a better handling of the indexed dataset that will permit some
optimizations to *fMRIPrep*'s memory fingerprint.
*SDCflows* now are found at `poldracklab/sdcflows <https://github.com/poldracklab/sdcflows>`__,
and have been split to allow a more granular and thorough testing in collaboration
with M. Cieslak, A. Adebimpe, and T. Satterthwaite.
Some other bugfixes, improvements to the documentation and minor features are also
shipped with the new release.

* FIX: Postpone ``pandoc`` conversion of boilerplate after workflow has fully run (#1710) @oesteban
* FIX: Use MNI152NLin2009cAsym for SDC if no templates are specified (#1703) @effigies
* FIX: Correct BOLD-T1w registration description if DoF != 9 (#1701) @effigies
* ENH: Make fmriprep print defaults for arguments with help (#1735) @gdevenyi
* ENH: Add check for updates and check whether version has been flagged. (#1715) @oesteban
* ENH: Add TaskName metadata to BOLD outputs (#1714) @effigies
* REF: Separate SDCflows from fMRIPrep (#1670) @oesteban
* DOC: Update .zenodo.json (#1732) @utooley
* DOC: Add link to documentation in help of ``--output-spaces`` argument (#1722) @oesteban
* DOC: adding recon-all issue to faq (#1622) @franklin-feingold
* DOC: Add copyright waiver to boilerplate and reviewer note to docs (#1691) @effigies
* MAINT: Bump pybids and nipype dependencies (#1744) @effigies
* MAINT: Move regression tests of EPI masks over to Niworkflows (#1716) @oesteban
* MAINT: Remove old ``extensions`` entity selector for PyBIDS queries (#1707) @oesteban
* MAINT: Use PyBIDS 0.9.x via niworkflows/smriprep PRs (#1695) @effigies