Skip to content
Snippets Groups Projects
  1. Jun 27, 2017
    • Dilawar Singh's avatar
      Squashed 'moose-examples/' changes from 37bf0cc..7ab9e3c · f27ad439
      Dilawar Singh authored
      7ab9e3c Let static page generation fail.
      c26d7c7 Build using travis and deploy onto github pages.
      feeaf6b Added theme for static pages.
      ae1fecb Merge branch 'dirty' of github.com:BhallaLab/moose-examples
      c25e57e Passing locally.
      2a2db61 Moved the integration to branch 'dirty'
      83a516c Test the dirty branch with jekyll.
      9667dee Added jekyll to create static page.
      742362a Testing Jekyll and travis integration.
      9aa4a3d Prepare index.md  file post test.
      e885ea5 Modified shell script so it does not hang.
      828464a Code to update README.md file with broken scripts.
      9a6b3b1 Deploy keys are added. Testing...
      74fb0ae Set theme jekyll-theme-minimal
      a4e7ce1 Deploy to github pages. Testing.
      e3f9a41 Added code to deploy on moose-examples static page.
      ab45904 Default timeout is 30 secs [ skip ci ]
      3e30131 Added python-pygraphviz to dependencies.
      b825107 Added python-scipy on travis.
      73d8bff Merge branch 'master' into traub_2005
      60a9f7d Update README.md
      4d30457 Updated VClamp commandIn destFinfo name in test_tcr
      8846ae5 Fixes for nonexistent NRN data
      03735e8 Fixed syntax error
      24c349d Multiple workarounds to directory paths and data files from neuron
      ccc1039 Fixed typo with data directory creation in traub 2005
      a15893b Fixed issue where new ZombieCompartment breaks old code using Compartment
      024aa0e Added attempt to automatic data directory creation
      96a815c updated ref to old table API
      78dcbb1 Merge branch 'traub_2005' of https://github.com/BhallaLab/moose-examples into traub_2005
      bc5c37d Added fix for #28 (metaclass portability)
      b347fa4 Fixes to load-sbml script.
      202bb51 Merge branch 'master' of git://github.com/malav4994/moose-examples into PR-25
      a20f451 On this branch, making traub_2005 test with recent release. Added subha on this branch. Removed everyone else.
      ac68f92 Ignore the traub_2015 directory on travis BhallaLab/moose-examples#28.
      caaa45e Removed a png file [skip ci]
      cf27b12 Added python-h5py on travis. The hdf5 related scripts needs this module to run on travis.
      afbb591 Merge remote-tracking branch 'origin/traub_2005'
      dc92ae8 Include traub_2005 in scripts to be tested on travis.
      ee70916 If a script is timedout after 30sec, dont consider it a failure. Fixed the result status of timeout command on 14.04 as indicated in manual http://git.savannah.gnu.org/cgit/coreutils.git/tree/src/timeout.c
      9f70d7f Fixes to import in loadSbmlmodel file. Read SBML fails.
      bbb3fe0 Increased timeout to 3m and using 4 parallel process.
      b5a856e Using backend agg to overcome build failure on travis. This way we will not launch the graphics on travis.
      450b3da Removed debug print
      d34a833 Fix to issue 28
      41f5c8b modified some of the snippets files for documentation
      
      git-subtree-dir: moose-examples
      git-subtree-split: 7ab9e3cfd8d74f79a73282572d4df4301b6df976
      f27ad439
  2. Jun 22, 2017
  3. Jun 21, 2017
    • Dilawar Singh's avatar
      Squashed 'moose-examples/' content from commit 3a960983fe · 378bf23c
      Dilawar Singh authored
      git-subtree-dir: moose-examples
      git-subtree-split: 3a960983fe23dad8e0b34883e61510d05a2f3b2a
      378bf23c
    • Dilawar Singh's avatar
      Squashed 'moose-core/' content from commit fe77059f98 · e6e83b76
      Dilawar Singh authored
      git-subtree-dir: moose-core
      git-subtree-split: fe77059f98c5a6cab2e106f78b7eb505f4f62850
      e6e83b76
    • Dilawar Singh's avatar
      Squashed 'moose-examples/' content from commit 2eb5fa888 · edd901da
      Dilawar Singh authored
      git-subtree-dir: moose-examples
      git-subtree-split: 2eb5fa888ff20afdc478366881255201b51a58b8
      edd901da
    • Dilawar Singh's avatar
      Squashed 'moose-core/' changes from b3b597f41..2ecab963b · 45f9e9b9
      Dilawar Singh authored
      2ecab963b Merge commit 'af3c29a4'
      ad3ec12ec Fixes to allow moose module to be installed and imported (#220)
      0fb32dec5 All changes from previous repository. No new file is added here.
      
      git-subtree-dir: moose-core
      git-subtree-split: 2ecab963b249229174cfef1fafd282977a7920c3
      45f9e9b9
    • Zbigniew Jędrzejewski-Szmek's avatar
      Fixes to allow moose module to be installed and imported (#220) · 60f3632e
      Zbigniew Jędrzejewski-Szmek authored
      * pymoose: unbreak installation under Python 3
      
      Commit 24ebac50 removed the setting
      of the suffix of the binary python module. Unfortunately no explanation
      was provided…
      Anyway, 'python3 setup.py build' and 'python3 setup.py install' stopped
      working because setup.py is expecting a file like
      _moose.cpython-36m-x86_64-linux-gnu.so, and it simply ignored _moose.so.
      As a result the binary module was not installed.
      
      * .gitignore: ignore "moose" only in the top-level directories
      
      Just "moose" would also match python/moose, with predictably bad
      consequences.
      
      * .gitignore: ignore VERSION
      
      It's a generated file.
      
      * Restore moose/moose.py
      
      It was removed in 24dea426. No
      explanation was provided, but it seems to have been a mistake, because
      without this file, 'import moose' has little chances of succeeding,
      since __init__.py includes 'from .moose import *'.
      
      * Fix a bunch of local imports
      60f3632e
  4. Apr 26, 2017
  5. May 18, 2016