ed5f015 Update README.md
a4a5cc1 Fixed linking error compiling with new gcc.
9a82850 Merge commit '912c550e28d1fccfd310c5968a07ae38dc60c698'
0fb7431 Added option to explicitly set CMAKE_DL_LIBS flag (-ldl).
da5fd97 Merge commit '9296cecdffbe647a929af4792360adbc3768e4bd'
093e681 Disabled unused part of code #86.
c698620 Merge commit '11af2e3b2ecd7b31aefa957412abb5b64ce54014'
57714ae Fixes to VERSION bug. See #BhallaLab/moose#200
59512e1 Merge commit '1d69d002939cc4b270ff4fc51e8a4800a6fbdad1'
3adb8b3 removed a print statement
9aa9405 Use git to generate version when not passed via command line. BhallaLab/moose#200 .
2f8a48e Merge commit '18331bb5a2f6aa2918a4e49b178297a79e3c791b'
c9714fd Merge branch 'master' of github.com:BhallaLab/moose-python-package
df2186a Merge commit 'ec45fa526f0e2de2b49bf05f3f7f8ddb1c7ff463'

git-subtree-dir: moose-core
git-subtree-split: ed5f0151b5c12301b826e47e5a1daaaa7044a714

clean up, all markdown files will be placed under docs/user/markdown, images under /docs/images one can use markdown2rst.py to convert Rdesigner,MooseGui and Kkit docs which places the file under docs/user/GUI and docs/user/Rdesigneur and further one can use makefile to convert to rst to html which will be placed under _build folder in respective folders

c2c32b9 Before tagging runing with clang.
1cc19f1 updated runtime to annotation field in moose
3ad9558 runTime and solver type is read from xml file to moose, cleaning in names
5de1f05 function output to pool object set's "setN" as input is "nOut"
ae24a3d Merge branch 'master' of https://github.com/BhallaLab/moose-core
7b43f70 Fixed Function unzombification for increment messages. Added update for time in Zombie Functions.
f4310e6 for now function output connected to pool via setConc message, but there is "increment" which depend on the function input this will be fixed later
f286dca removed writekkit.py duplicate file
6d299eb replace all the obj under /kinetics or /kinetics/group which is required by genesis format
a6dad52 Merge branch 'master' of https://github.com/BhallaLab/moose-core
0ddbd21 Gsolve updates to monitor number of reac events. Stoich updates to avoid crashes when handling edge cases without objects in model.
2ab410d function can be conn...

"

build environment from precise to trusty.

A test case test_sbml_support.py which inturn calls to write moosewriteSBML which needs networkx which is added as a dependency for travis

1e5f537 compartment size is fix for newly built model

git-subtree-dir: moose-gui
git-subtree-split: 1e5f537644e746420353c4e9ec26d5b08f4262ad

c21a557 line color for enzparent and enz is the color of enzparent's bgcolor
c99de1b model saved to Genesis formate with co-ordinates, with addition pool obj added to existing gensis model and also once can save newly built model to Genesis format

git-subtree-dir: moose-gui
git-subtree-split: c21a557870de4402a7d4118c3e09507d2f9bdece