- Apr 24, 2017
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Dilawar Singh authored
Conflicts: moose-core/CMakeLists.txt
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- Apr 23, 2017
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Dilawar Singh authored
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- Apr 22, 2017
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Dilawar Singh authored
portable solution.
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- Apr 21, 2017
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Dilawar Singh authored
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Dilawar Singh authored
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- Apr 15, 2017
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Dilawar Singh authored
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Dilawar Singh authored
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Dilawar Singh authored
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Dilawar Singh authored
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Dilawar Singh authored
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- Jan 26, 2017
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Asia Jedrzejewska-Szmek authored
Script creates a test model of a dendrite segment with one Ca channel. DifShells are created. DifBuffers are created. DifShells are connected to provide diffusion. DifBuffers are connected to provide diffusion. DifBuffers are connected with DifShells to provide buffer. MMPumps are created and connected to the outer DifShell. Ca channel is connected to the outer Difshell to provide Ca influx and outer DifShell is connected to Ca channel to provide ion concentration. Segment's Vm, channel's Gk and Ik, DifShell's C and DifBuffer's bBound are connected with output to save simulation results.
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- Jan 23, 2017
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Dilawar Singh authored
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- Jan 20, 2017
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
Make sure that innerArea is not negative. Move sending out of messages to the bottom of the process function. Add sending out of concentration to the buffer and diffusion to other difshells in DifShell and diffusion to other buffers in DifBuffer in reinit. This matches genesis implementation.
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Asia Jędrzejewska-Szmek authored
In DifShell reinit set C (calcium) to Ceq. In DifBuffer reinit calculate bFree (free buffer) and bBound (bound buffer) to steady state value. This matches genesis implementation.
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Asia Jędrzejewska-Szmek authored
Integration results were incorrect, because the helper variables were not reset after every iteration.
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
Most of Cinfo code is moved to DifShellBase, so it got deleted from DifShell. Method's names are changed, because they are now inherited from DifShellBase.
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Asia Jędrzejewska-Szmek authored
Base classes are necessary for implementing hsolve.
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
Reintroduced implementation of Difbuffer used moose objects that have been since rewritten and renamed. Change used moose objects to current version.
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
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Asia Jędrzejewska-Szmek authored
Change process_0 to proc, to match other classes which need to be driven by ticks.
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Asia Jędrzejewska-Szmek authored
π is defined as a constant in the headers, no need to create a variable. Also constify some other variables. No functional change.
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Asia Jędrzejewska-Szmek authored
New getters and setters are added.
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- Jan 06, 2017
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Dilawar Singh authored
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- Jan 05, 2017
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Dilawar Singh authored
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