INSTALL.md

Pre-built packages

Linux

Use our repositories hosted at Open Build Service. We have packages for Debian, Ubuntu, CentOS, Fedora, OpenSUSE/SUSE, RHEL, Scientific Linux. Visit the following page for instructions.

https://software.opensuse.org/download.html?project=home:moose&package=moose

MacOSX

MOOSE is available via homebrew.

$ brew install homebrew/science/moose 

Building MOOSE from source

To build MOOSE from source, you can either use cmake (recommended) or GNU make based flow.

Download the latest source code of moose from github.

$ git clone -b master https://github.com/BhallaLab/moose-core

Install dependencies

For moose-core:

• gsl-1.16 or higher.
• libhdf5-dev (optional)
• python-dev
• python-numpy

On Ubuntu-12.04 or higher, these can be installed with:

sudo apt-get install python-dev python-numpy libhdf5-dev cmake libgsl0-dev g++ 

NOTE : On Ubuntu 12.04, gsl version is 1.15. You should skip libgsl0-dev install gsl-1.16 or higher manually.

SBML support is enabled by installing python-libsbml. Alternatively, it can be installed by using python-pip

$ sudo pip install python-libsbml

Use cmake to build moose: