spack.yaml

spack:
  include:
    - site-config/$SYSTEMNAME
  specs:
    # EBRAINS tools
    - arbor@0.9.0 +python +mpi
    - biobb-analysis@4.0.1
    - biobb-chemistry@4.0.0
    - biobb-common@4.0.0
    - biobb-gromacs@4.0.0
    - biobb-io@4.0.0
    - biobb-model@4.0.0
    - biobb-structure-checking@3.12.1
    - biobb-structure-utils@4.0.0
    - hxtorch@8.0-a5
    - nest@3.7 +sonata
    - neuron@8.2.3 +mpi
    - jaxsnn@8.0-a5
    - py-bluepyefe@2.2.18
    - py-bluepymm@0.7.65
    - py-bluepyopt@1.13.86
    - py-bsb@4.0.0a57
    - py-ebrains-drive@0.6.0
    - py-ebrains-kg-core@0.9.15
    - py-efel@4.0.4
    - py-elephant@1.1.0
    - py-fairgraph@0.12.0
    - py-frites@0.4.4
    - py-hbp-archive@1.1.1
    - py-hbp-neuromorphic-platform@0.11.2
    - py-hbp-validation-client@0.8.2
    - py-hippounit@1.3.6
    - py-lfpy@2.3
    - py-lfpykit@0.5.1
    - py-libneuroml@0.4.1
    - py-libsonata@0.1.23
    - py-neo@0.13.0
    - py-nestml@7.0.2
    - py-netpyne@1.0.6
    - py-neurom@3.2.2
    - py-neuror@1.6.4
    - py-pynn@0.12.3 +mpi
    - py-pyunicore@1.0.1
    - py-quantities-scidash@0.12.4.3
    - py-quantities@0.15.0
    - py-siibra@1.0a9
    - py-snudda@2.0.1
    - py-spynnaker@7.0.0
    - py-tvb-contrib@2.9
    - py-tvb-data@2.8
    - py-tvb-framework@2.9
    - py-tvb-gdist@2.2
    - py-tvb-library@2.9
    - py-tvb-multiscale@2.1.0.ebrains
    - py-tvb-storage@2.9
    - py-viziphant@0.4.0
    - pynn-brainscales@8.0-a5
    - r-rgsl@0.1.1
    - r-sbtabvfgen@0.1
    - r-uqsa@2.2
    - sda@7.3.3d
    # Workflows (meta-packages)
    - wf-biobb
    - wf-brainscales2-demos@8.0-a5
    - wf-protein-association-rates@0.1
    - wf-multi-area-model@1.2.0
    - wf-uq-akar4@0.1
    - wf-custom-python@0.1
    #- py-cerebstats
    #- py-cerebunit