Update dependencies.

base/requirements.txt

@@ -18,7 +18,7 @@ jupyterlab-git==0.34.1
 jupyter-server==1.13.5
 lazyarray==0.5.1
 lxml==4.7.1
-matplotlib==3.5.1
+matplotlib==3.5.3
 mpi4py==3.1.3
 nbdime==3.1.1
 nbgitpuller==1.0.2
@@ -27,9 +27,9 @@ neo==0.10.0
 neurom==3.1.0
 nglview==3.0.3
 nibabel==3.2.1
-numba==0.54.1
+numba==0.56.4
 numexpr==2.8.1
-numpy==1.20.3
+numpy==1.24.2
 pandas==1.3.5
 patsy==0.5.2
 plotly==5.5.0
@@ -43,7 +43,7 @@ rise==5.7.1
 rpy2==3.4.5
 scikit-image==0.19.1
 scikit-learn==1.0.2
-scipy==1.7.3
+scipy==1.10.1
 seaborn==0.11.2
 statsmodels==0.13.1
 sympy==1.9