add vbi v0.1.3.2

Summary

Package	vbi
Version added	v0.1.3.2
Contact point	ziaee

Checks

• Software Quality Checklist: SQ-Checklist.pdf (level: )
• Current maintainer is listed first in package.py
• No pinned dependency versions
• Post-installation tests are defined

packages/arbor/package.py

@@ -13,10 +13,15 @@ class Arbor(CMakePackage, CudaPackage):
     homepage = "https://arbor-sim.org"
     git = "https://github.com/arbor-sim/arbor.git"
     url = "https://github.com/arbor-sim/arbor/releases/download/v0.9.0/arbor-v0.9.0-full.tar.gz"
-    maintainers = ["thorstenhater", "brenthuisman", "haampie"]
+    maintainers = ("thorstenhater", "ErbB4", "haampie")
 
-    version("master", branch="master")
-    version("develop")
+    version("master", branch="master", submodules=True)
+    version("develop", branch="master", submodules=True)
+    version(
+        "0.10.0",
+        sha256="72966b7a2f45ce259b8ba167ca3e4f5ab9f212136a300267aaac0c04ed3fe3fc",
+        url="https://github.com/arbor-sim/arbor/releases/download/v0.10.1/arbor-v0.10.0-full.tar.gz",
+    )
     version(
         "0.9.0",
         sha256="5f9740955c821aca81e23298c17ad64f33f635756ad9b4a0c1444710f564306a",
@@ -75,36 +80,50 @@ class Arbor(CMakePackage, CudaPackage):
     conflicts("%cce@:9.1")
     conflicts("%intel")
 
+    # begin EBRAINS (modified: added run dep)
     depends_on("cmake@3.19:", type=("build", "run"))
+    # end EBRAINS
 
     # misc dependencies
     depends_on("fmt@7.1:", when="@0.5.3:")  # required by the modcc compiler
     depends_on("fmt@9.1:", when="@0.7.1:")
-    depends_on("googletest@1.12.1", when="@0.7.1:")
+    # begin EBRAINS (modified: relaxed (upstream gave no info about update))
+    # upstream adds: depends_on("fmt@10.1:", when="@0.9.1:")
+    depends_on("googletest@1.12.1:", when="@0.7.1:")
     depends_on("pugixml@1.11:", when="@0.7.1:")
-    depends_on("nlohmann-json@3.11.2")
+    # upstream adds: depends_on("pugixml@1.13:", when="@0.9.1:")
+    depends_on("nlohmann-json@3.11.2:")
     depends_on("random123")
+    #upstream adds: depends_on("random123@1.14.0:", when="@0.10:")
+    # end EBRAINS (modified)
     with when("+cuda"):
         depends_on("cuda@10:")
         depends_on("cuda@11:", when="@0.7.1:")
+        depends_on("cuda@12:", when="@0.9.1:")
 
     # mpi
+    # begin EBRAINS (modified: added run dep)
     depends_on("mpi", when="+mpi", type=("build", "run"))
+    # end EBRAINS (modified)
     depends_on("py-mpi4py", when="+mpi+python", type=("build", "run"))
 
     # python (bindings)
-    extends("python", when="+python")
-    depends_on("python@3.7:", when="+python", type=("build", "run"))
-    depends_on("py-numpy", when="+python", type=("build", "run"))
     with when("+python"):
+        extends("python")
+        depends_on("python@3.7:", type=("build", "run"))
+        depends_on("python@3.9:", when="@0.9.1:", type=("build", "run"))
+        depends_on("py-numpy", type=("build", "run"))
         depends_on("py-pybind11@2.6:", type="build")
         depends_on("py-pybind11@2.8.1:", when="@0.5.3:", type="build")
         depends_on("py-pybind11@2.10.1:", when="@0.7.1:", type="build")
+        depends_on("py-pandas", type="test")
+        depends_on("py-seaborn", type="test")
 
     # sphinx based documentation
-    depends_on("python@3.7:", when="+doc", type="build")
-    depends_on("py-sphinx", when="+doc", type="build")
-    depends_on("py-svgwrite", when="+doc", type="build")
+    with when("+doc"):
+        depends_on("python@3.10:", type="build")
+        depends_on("py-sphinx", type="build")
+        depends_on("py-svgwrite", type="build")
 
     @property
     def build_targets(self):
@@ -127,7 +146,11 @@ class Arbor(CMakePackage, CudaPackage):
         opt_flags = spack.build_environment.optimization_flags(
             self.compiler, self.spec.target
         )
-        args.append("-DARB_CXX_FLAGS_TARGET=" + opt_flags)
+        # Might return nothing
+        if opt_flags:
+            args.append("-DARB_CXX_FLAGS_TARGET=" + opt_flags)
+        # Needed, spack has no units package
+        args.append("-DARB_USE_BUNDLED_UNITS=ON")
 
         return args
 
@@ -135,3 +158,4 @@ class Arbor(CMakePackage, CudaPackage):
     @on_package_attributes(run_tests=True)
     def install_test(self):
         python("-c", "import arbor")
+        python("python/example/single_cell_model.py")