Skip to content
Snippets Groups Projects
Commit c0177184 authored by Eleni Mathioulaki's avatar Eleni Mathioulaki
Browse files

add jsc site-config for Stages/2024

parent 8e3f5d5e
No related branches found
No related tags found
No related merge requests found
Pipeline #27595 waiting for manual action with stage
in 8 minutes and 26 seconds
Hide whitespace changes
Inline Side-by-side
site-config/jurecadc/compilers.yaml
+ 11
− 10
View file @ c0177184
compilers: compilers:
- compiler: - compiler:
spec: gcc@11.3.0 spec: gcc@12.3.0
paths: paths:
cc: /p/software/jurecadc/stages/2023/software/GCCcore/11.3.0/bin/gcc cc: /p/software/jurecadc/stages/2024/software/GCCcore/12.3.0/bin/gcc
cxx: /p/software/jurecadc/stages/2023/software/GCCcore/11.3.0/bin/g++ cxx: /p/software/jurecadc/stages/2024/software/GCCcore/12.3.0/bin/g++
f77: /p/software/jurecadc/stages/2023/software/GCCcore/11.3.0/bin/gfortran f77: /p/software/jurecadc/stages/2024/software/GCCcore/12.3.0/bin/gfortran
fc: /p/software/jurecadc/stages/2023/software/GCCcore/11.3.0/bin/gfortran fc: /p/software/jurecadc/stages/2024/software/GCCcore/12.3.0/bin/gfortran
flags: {} flags: {}
operating_system: rocky8 operating_system: rocky8
target: x86_64 target: x86_64
modules: modules:
- StdEnv/2023 - StdEnv/2024
environment: {} environment: {}
extra_rpaths: [] extra_rpaths: []
- compiler: - compiler:
spec: gcc@8.5.0 spec: gcc@8.5.0
...@@ -20,9 +20,10 @@ compilers: ...@@ -20,9 +20,10 @@ compilers:
cxx: /usr/bin/g++ cxx: /usr/bin/g++
f77: null f77: null
fc: null fc: null
flags: {} flags: {}
operating_system: rocky8 operating_system: rocky8
target: x86_64 target: x86_64
modules: [] modules: []
environment: {} environment: {}
extra_rpaths: [] extra_rpaths: []
site-config/jurecadc/config.yaml
+ 6
− 5
View file @ c0177184
config: config:
build_stage: build_stage:
- /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/spack-stage - /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/spack-stage
- $tempdir/$user/spack-stage - $tempdir/$user/spack-stage
source_cache: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/source-cache source_cache: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/source-cache
test_stage: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/test test_stage: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/test
misc_cache: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/cache misc_cache: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/cache
install_tree: install_tree:
root: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/install root: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/install
db_lock_timeout: 10 db_lock_timeout: 10
site-config/jurecadc/packages.yaml
+ 35
− 110
View file @ c0177184
# `spack external find` with # `spack external find` with
# Currently Loaded Modules: # Currently Loaded Modules:
# 1) Stages/2023 (S) 2) GCCcore/.11.3.0 (H) 3) zlib/.1.2.12 (H) 4) binutils/.2.38 (H) 5) StdEnv/2023 6) spack/0.19.2 # 1) Stages/2024 (S) 2) GCCcore/.12.3.0 (H) 3) zlib/.1.2.13 (H) 4) binutils/.2.40 (H) 5) StdEnv/2024 6) spack/0.20.0
packages: packages:
cuda:
externals:
- spec: cuda@12
prefix: /p/software/jurecadc/stages/2024/software/CUDA/12/
modules:
- Stages/2024
- CUDA/12
cudnn:
externals:
- spec: cudnn@8.9.5.29-12
prefix: /p/software/jurecadc/stages/2024/software/cuDNN/8.9.5.29-CUDA-12/
modules:
- Stages/2024
- cuDNN/8.9.5.29-CUDA-12
mpi:
buildable: False
mpich:
externals:
- spec: "mpich@4.1.5%gcc@12.3.0 arch=linux-rocky8-zen2"
prefix: /p/software/jurecadc/stages/2024/software/psmpi/5.9.2-1-GCC-12.3.0-pmi/
modules:
- Stages/2024
- GCC/12.3.0
- ParaStationMPI/5.9.2-1-pmi
- MPI-settings/CUDA
all: all:
variants: +cuda cuda_arch=75,80 compiler: ["gcc@12.3"]
variants: +mpi +cuda cuda_arch=75,80
llvm: llvm:
variants: ~cuda variants: ~cuda
findutils: binutils:
externals: externals:
- spec: findutils@4.6.0 - spec: binutils@2.40
prefix: /usr prefix: /p/software/jurecadc/stages/2024/software/binutils/2.40-GCCcore-12.3.0
groff:
externals:
- spec: groff@1.22.3
prefix: /usr
flex:
externals:
- spec: flex@2.6.1+lex
prefix: /usr
diffutils:
externals:
- spec: diffutils@3.6
prefix: /usr
# TODO git, git-lsf and especially curl have been removed due to system curl not having support for https
# git:
# externals:
# - spec: git@2.31.1~tcltk
# prefix: /usr
m4:
externals:
- spec: m4@1.4.18
prefix: /usr
# TODO Using system version causes 'missing makeinfo', as the binary is not available
# texinfo:
# externals:
# - spec: texinfo@6.5
# prefix: /usr
subversion:
externals:
- spec: subversion@1.10.2
prefix: /usr
libtool:
externals:
- spec: libtool@2.4.6
prefix: /usr
binutils:
externals:
- spec: binutils@2.38
prefix: /p/software/jurecadc/stages/2023/software/binutils/2.38-GCCcore-11.3.0
openssl: openssl:
externals: externals:
- spec: openssl@1.1.1k - spec: openssl@1.1
prefix: /p/software/jurecadc/stages/2023/software/OpenSSL/1.1 prefix: /p/software/jurecadc/stages/2024/software/OpenSSL/1.1
pkgconf:
externals:
- spec: pkgconf@1.4.2
prefix: /usr
automake:
externals:
- spec: automake@1.16.1
prefix: /usr
tar:
externals:
- spec: tar@1.30
prefix: /usr
gmake:
externals:
- spec: gmake@4.2.1
prefix: /usr
openssh:
externals:
- spec: openssh@8.0p1
prefix: /usr
# curl:
# externals:
# - spec: curl@7.61.1+gssapi+ldap+nghttp2
# prefix: /usr
# git-lfs:
# externals:
# - spec: git-lfs@2.13.3
# prefix: /usr
gawk:
externals:
- spec: gawk@4.2.1
prefix: /usr
coreutils:
externals:
- spec: coreutils@8.30
prefix: /usr
bison:
externals:
- spec: bison@3.0.4
prefix: /usr
autoconf:
externals:
- spec: autoconf@2.69
prefix: /usr
# packages:
# all:
# compiler: [gcc@11.2.0]
# python:
# buildable: False
# version: [3.9.6]
# externals:
# - spec: "python@3.9.6%gcc@11.2.0 arch=linux-rocky8-zen2"
# prefix: /p/software/jurecadc/stages/2022/software/Python/3.9.6-GCCcore-11.2.0/
# openssl:
# buildable: False
# version: [1.1.1k]
# externals:
# - spec: openssl@1.1.1k
# prefix: /p/software/jurecadc/stages/2022/software/OpenSSL/1.1/
# mpi:
# buildable: False
# openmpi:
# externals:
# - spec: "openmpi@4.1.2%gcc@11.2.0 arch=linux-rocky8-zen2"
# prefix: /p/software/jurecadc/stages/2022/software/OpenMPI/4.1.2-GCC-11.2.0/
site-config/jusuf/compilers.yaml
+ 6
− 6
View file @ c0177184
compilers: compilers:
- compiler: - compiler:
spec: gcc@11.3.0 spec: gcc@12.3.0
paths: paths:
cc: /p/software/jusuf/stages/2023/software/GCCcore/11.3.0/bin/gcc cc: /p/software/jusuf/stages/2024/software/GCCcore/12.3.0/bin/gcc
cxx: /p/software/jusuf/stages/2023/software/GCCcore/11.3.0/bin/g++ cxx: /p/software/jusuf/stages/2024/software/GCCcore/12.3.0/bin/g++
f77: /p/software/jusuf/stages/2023/software/GCCcore/11.3.0/bin/gfortran f77: /p/software/jusuf/stages/2024/software/GCCcore/12.3.0/bin/gfortran
fc: /p/software/jusuf/stages/2023/software/GCCcore/11.3.0/bin/gfortran fc: /p/software/jusuf/stages/2024/software/GCCcore/12.3.0/bin/gfortran
flags: {} flags: {}
operating_system: rocky8 operating_system: rocky8
target: x86_64 target: x86_64
modules: modules:
- StdEnv/2023 - StdEnv/2024
environment: {} environment: {}
extra_rpaths: [] extra_rpaths: []
- compiler: - compiler:
......
site-config/jusuf/config.yaml
+ 5
− 5
View file @ c0177184
config: config:
build_stage: build_stage:
- /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/spack-stage - /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/spack-stage
- $tempdir/$user/spack-stage - $tempdir/$user/spack-stage
source_cache: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/source-cache source_cache: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/source-cache
test_stage: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/test test_stage: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/test
misc_cache: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/spack/user-cache/$user/cache misc_cache: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/spack-cache/user-cache/$user/cache
install_tree: install_tree:
root: /p/usersoftware/swmanage/EBRAINS/$SYSTEMNAME/install root: /p/usersoftware/ebrains-sw-stack/ebrains-23.09/$SYSTEMNAME/install
db_lock_timeout: 10 db_lock_timeout: 10
site-config/jusuf/packages.yaml
+ 35
− 111
View file @ c0177184
# `spack external find` with # `spack external find` with
# Currently Loaded Modules: # Currently Loaded Modules:
# 1) Stages/2023 (S) 2) GCCcore/.11.3.0 (H) 3) zlib/.1.2.12 (H) 4) binutils/.2.38 (H) 5) StdEnv/2023 6) spack/0.19.2 # 1) Stages/2024 (S) 2) GCCcore/.12.3.0 (H) 3) zlib/.1.2.13 (H) 4) binutils/.2.40 (H) 5) StdEnv/2024 6) spack/0.20.0
packages: packages:
cuda:
externals:
- spec: cuda@12
prefix: /p/software/jusuf/stages/2024/software/CUDA/12/
modules:
- Stages/2024
- CUDA/12
cudnn:
externals:
- spec: cudnn@8.9.5.29-12
prefix: /p/software/jusuf/stages/2024/software/cuDNN/8.9.5.29-CUDA-12/
modules:
- Stages/2024
- cuDNN/8.9.5.29-CUDA-12
mpi:
buildable: False
mpich:
externals:
- spec: "mpich@4.1.5%gcc@12.3.0 arch=linux-rocky8-zen2"
prefix: /p/software/jusuf/stages/2024/software/psmpi/5.9.2-1-GCC-12.3.0-pmi/
modules:
- Stages/2024
- GCC/12.3.0
- ParaStationMPI/5.9.2-1-pmi
- MPI-settings/CUDA
all: all:
variants: +cuda cuda_arch=75,80 compiler: ["gcc@12.3"]
variants: +mpi +cuda cuda_arch=75,80
llvm: llvm:
variants: ~cuda variants: ~cuda
findutils:
externals:
- spec: findutils@4.6.0
prefix: /usr
groff:
externals:
- spec: groff@1.22.3
prefix: /usr
flex:
externals:
- spec: flex@2.6.1+lex
prefix: /usr
diffutils:
externals:
- spec: diffutils@3.6
prefix: /usr
# TODO git, git-lsf and especially curl have been removed due to system curl not having support for https
# git:
# externals:
# - spec: git@2.31.1~tcltk
# prefix: /usr
m4:
externals:
- spec: m4@1.4.18
prefix: /usr
# TODO Using system version causes 'missing makeinfo', as the binary is not available
# texinfo:
# externals:
# - spec: texinfo@6.5
# prefix: /usr
subversion:
externals:
- spec: subversion@1.10.2
prefix: /usr
libtool:
externals:
- spec: libtool@2.4.6
prefix: /usr
binutils: binutils:
externals: externals:
- spec: binutils@2.38 - spec: binutils@2.40
prefix: /p/software/jusuf/stages/2023/software/binutils/2.38-GCCcore-11.3.0 prefix: /p/software/jusuf/stages/2024/software/binutils/2.40-GCCcore-12.3.0
openssl: openssl:
externals: externals:
- spec: openssl@1.1.1k - spec: openssl@1.1
prefix: /p/software/jusuf/stages/2023/software/OpenSSL/1.1 prefix: /p/software/jusuf/stages/2024/software/OpenSSL/1.1
pkgconf:
externals:
- spec: pkgconf@1.4.2
prefix: /usr
automake:
externals:
- spec: automake@1.16.1
prefix: /usr
tar:
externals:
- spec: tar@1.30
prefix: /usr
gmake:
externals:
- spec: gmake@4.2.1
prefix: /usr
openssh:
externals:
- spec: openssh@8.0p1
prefix: /usr
# curl:
# externals:
# - spec: curl@7.61.1+gssapi+ldap+nghttp2
# prefix: /usr
# git-lfs:
# externals:
# - spec: git-lfs@2.13.3
# prefix: /usr
gawk:
externals:
- spec: gawk@4.2.1
prefix: /usr
coreutils:
externals:
- spec: coreutils@8.30
prefix: /usr
bison:
externals:
- spec: bison@3.0.4
prefix: /usr
autoconf:
externals:
- spec: autoconf@2.69
prefix: /usr
# packages:
# all:
# compiler: [gcc@11.2.0]
# python:
# buildable: False
# version: [3.9.6]
# externals:
# - spec: "python@3.9.6%gcc@11.2.0 arch=linux-rocky8-zen2"
# prefix: /p/software/jusuf/stages/2022/software/Python/3.9.6-GCCcore-11.2.0/
# openssl:
# buildable: False
# version: [1.1.1k]
# externals:
# - spec: openssl@1.1.1k
# prefix: /p/software/jusuf/stages/2022/software/OpenSSL/1.1/
# mpi:
# buildable: False
# openmpi:
# externals:
# - spec: "openmpi@4.1.2%gcc@11.2.0 arch=linux-rocky8-zen2"
# prefix: /p/software/jusuf/stages/2022/software/OpenMPI/4.1.2-GCC-11.2.0/
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment