Add region areas to reports
Working session with Harry. Read in flat files from a folder. Scale flat files to size of seg. Calculate region areas per slice. Create slice reports with region areas and object areas. Create report for all slices by summing slice reports. In progress.
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- PyNutil/coordinate_extraction.py 21 additions, 1 deletionPyNutil/coordinate_extraction.py
- PyNutil/counting_and_load.py 11 additions, 3 deletionsPyNutil/counting_and_load.py
- PyNutil/load_workflow.py 8 additions, 3 deletionsPyNutil/load_workflow.py
- PyNutil/main.py 9 additions, 4 deletionsPyNutil/main.py
- test_data/PyTest_seg/flat_files/test_s001_nl.flat 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s001_nl.flat
- test_data/PyTest_seg/flat_files/test_s001_nl.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s001_nl.png
- test_data/PyTest_seg/flat_files/test_s001_nl_rbw.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s001_nl_rbw.png
- test_data/PyTest_seg/flat_files/test_s002_nl.flat 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s002_nl.flat
- test_data/PyTest_seg/flat_files/test_s002_nl.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s002_nl.png
- test_data/PyTest_seg/flat_files/test_s002_nl_rbw.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s002_nl_rbw.png
- test_data/PyTest_seg/flat_files/test_s003_nl.flat 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s003_nl.flat
- test_data/PyTest_seg/flat_files/test_s003_nl.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s003_nl.png
- test_data/PyTest_seg/flat_files/test_s003_nl_rbw.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s003_nl_rbw.png
- test_data/PyTest_seg/flat_files/test_s004_nl.flat 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s004_nl.flat
- test_data/PyTest_seg/flat_files/test_s004_nl.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s004_nl.png
- test_data/PyTest_seg/flat_files/test_s004_nl_rbw.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s004_nl_rbw.png
- test_data/PyTest_seg/flat_files/test_s005_nl.flat 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s005_nl.flat
- test_data/PyTest_seg/flat_files/test_s005_nl.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s005_nl.png
- test_data/PyTest_seg/flat_files/test_s005_nl_rbw.png 0 additions, 0 deletionstest_data/PyTest_seg/flat_files/test_s005_nl_rbw.png
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