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Commit c12e0527 authored by Eleni Mathioulaki's avatar Eleni Mathioulaki
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fix cobrawap test

parent 82b7be6f
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packages/py-cobrawap/package.py
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...@@ -52,7 +52,7 @@ class PyCobrawap(PythonPackage): ...@@ -52,7 +52,7 @@ class PyCobrawap(PythonPackage):
@on_package_attributes(run_tests=True) @on_package_attributes(run_tests=True)
def init_test(self): def init_test(self):
# run test here # run test here
cobrawap = which("cobrawap") cobrawap = Executable(self.prefix.bin + "/cobrawap")
cobrawap("init", "--output_path", "/tmp/output_path", "--config_path", "/tmp/config_path") cobrawap("init", "--output_path", "/tmp/output_path", "--config_path", "/tmp/config_path")
cobrawap("settings") cobrawap("settings")
# test_dataset_url = "https://object.cscs.ch/v1/AUTH_63ea6845b1d34ad7a43c8158d9572867/hbp-d000036_m-SWA-WF-wide-regions-v2_pub/m-SWA-WF-wide-regions/GCaMP6f_Ketamine%20I/t3.rar" # test_dataset_url = "https://object.cscs.ch/v1/AUTH_63ea6845b1d34ad7a43c8158d9572867/hbp-d000036_m-SWA-WF-wide-regions-v2_pub/m-SWA-WF-wide-regions/GCaMP6f_Ketamine%20I/t3.rar"
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