remove any remaining private data

src/main/java/eu/hbp/mip/configuration/PersistenceConfiguration.java

 package eu.hbp.mip.configuration;
 
-import eu.hbp.mip.utils.CSVUtil;
 import org.flywaydb.core.Flyway;
 import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.boot.orm.jpa.EntityScan;
@@ -26,11 +25,6 @@ public class PersistenceConfiguration {
     @Autowired
     DataSource dataSource;
 
-    @Bean
-    public CSVUtil csvUtil() {
-        return new CSVUtil();
-    }
-
     @Bean
     @DependsOn("flyway")
     public LocalContainerEntityManagerFactoryBean entityManagerFactory() {

src/main/java/eu/hbp/mip/controllers/ModelsApi.java

@@ -11,12 +11,11 @@ import eu.hbp.mip.model.Model;
 import eu.hbp.mip.model.User;
 import eu.hbp.mip.model.Variable;
 import eu.hbp.mip.repositories.ConfigRepository;
+import eu.hbp.mip.repositories.DatasetRepository;
 import eu.hbp.mip.repositories.ModelRepository;
-import eu.hbp.mip.utils.CSVUtil;
+import eu.hbp.mip.repositories.QueryRepository;
 import io.swagger.annotations.*;
 import org.apache.log4j.Logger;
-import eu.hbp.mip.repositories.DatasetRepository;
-import eu.hbp.mip.repositories.QueryRepository;
 import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.http.HttpStatus;
 import org.springframework.http.ResponseEntity;
@@ -38,9 +37,6 @@ public class ModelsApi {
     @Autowired
     SecurityConfiguration securityConfiguration;
 
-    @Autowired
-    CSVUtil csvUtil;
-
     @Autowired
     DatasetRepository datasetRepository;
 

src/main/java/eu/hbp/mip/controllers/RequestsApi.java

@@ -4,12 +4,10 @@
 
 package eu.hbp.mip.controllers;
 
-import io.swagger.annotations.*;
 import eu.hbp.mip.model.Dataset;
 import eu.hbp.mip.model.Query;
-import eu.hbp.mip.utils.CSVUtil;
+import io.swagger.annotations.*;
 import org.apache.log4j.Logger;
-import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.http.ResponseEntity;
 import org.springframework.web.bind.annotation.RequestBody;
 import org.springframework.web.bind.annotation.RequestMapping;
@@ -25,11 +23,6 @@ public class RequestsApi {
 
     private static final Logger LOGGER = Logger.getLogger(RequestsApi.class);
 
-    private static final String DATA_FILE = "data/values.csv";
-
-    @Autowired
-    CSVUtil csvUtil;
-
     @ApiOperation(value = "Post a request", response = Dataset.class)
     @ApiResponses(value = { @ApiResponse(code = 200, message = "Success") })
     @RequestMapping(method = RequestMethod.POST)
@@ -39,7 +32,7 @@ public class RequestsApi {
     )  {
         LOGGER.info("Post a request");
 
-        return ResponseEntity.ok(csvUtil.parseValues(DATA_FILE, query));
+        return ResponseEntity.ok(null);
     }
 
 }

src/main/resources/db/migration/V1_2__AddGroups.sql

---
--- Add group
---
-
-COPY "group" (code, label, parent_code) FROM stdin;
-root	root	\N
-no-group	no-group	root
-provenance	provenance	root
-source	source	provenance
-protocol	protocol	provenance
-date	date	provenance
-brain_metabolism	brain_metabolism	root
-PET	PET	brain_metabolism
-brain_scan	brain_scan	root
-machine	machine	brain_scan
-clinical	clinical	root
-diagnostic	diagnostic	clinical
-cognition	cognition	clinical
-ecog	ECoG	cognition
-adas	ADAS	cognition
-mmse	MMSE	cognition
-ravlt	RAVLT	cognition
-moca	MOCA	cognition
-faq	FAQ	cognition
-cdrsb	CDRSB	cognition
-Date	Date	root
-year	year	Date
-demographic	demographic	root
-age	age	demographic
-genre	genre	demographic
-education	education	demographic
-ethny	ethny	demographic
-country	country	demographic
-marital	marital	demographic
-genetic	Genetic	root
-polymorphism	polymorphism	genetic
-APOE	APOE	polymorphism
-visit	visit	root
-number	number	visit
-period	period	visit
-brain	Brain	root
-brain_anatomy	Brain anatomy	brain
-grey_matter_volume	Grey matter volume	brain_anatomy
-insula	Insula	grey_matter_volume
-frontal	Frontal	grey_matter_volume
-orbitalgyrus	Orbitalgyrus	frontal
-parietal	Parietal	grey_matter_volume
-occipital	Occipital	grey_matter_volume
-temporal	Temporal	grey_matter_volume
-limbic	Limbic	grey_matter_volume
-cerebral_nuclei	Cerebral nuclei	grey_matter_volume
-basal_ganglia	Basal Ganglia	cerebral_nuclei
-amygdala	Amygdala	cerebral_nuclei
-basal_forebrain	Basal forebrain	cerebral_nuclei
-csf	CSF	brain_anatomy
-ventricule	Ventricule	csf
-white_matter_volume	White matter volume	brain_anatomy
-BrainStem	Brain stem	white_matter_volume
-GlobalWhiteMatter	Global	white_matter_volume
-CerebellumWhiteMatter	Cerebellum	white_matter_volume
-OpticChiasmWhiteMatter	OpticChiasm	white_matter_volume
-diencephalon	Diencephalon	white_matter_volume
-vessel	Vessel	white_matter_volume
-grey_matter_surface	Grey matter surface	brain
-\.
-
-
---
--- Add group_group
---
-
-COPY group_group (group_code, groups_code) FROM stdin;
-provenance	source
-provenance	protocol
-provenance	date
-brain_metabolism	PET
-brain_scan	machine
-cognition	ecog
-cognition	adas
-cognition	mmse
-cognition	ravlt
-cognition	moca
-cognition	faq
-cognition	cdrsb
-clinical	diagnostic
-clinical	cognition
-Date	year
-demographic	age
-demographic	genre
-demographic	education
-demographic	ethny
-demographic	country
-demographic	marital
-polymorphism	APOE
-genetic	polymorphism
-visit	number
-visit	period
-frontal	orbitalgyrus
-cerebral_nuclei	basal_ganglia
-cerebral_nuclei	amygdala
-cerebral_nuclei	basal_forebrain
-grey_matter_volume	insula
-grey_matter_volume	frontal
-grey_matter_volume	parietal
-grey_matter_volume	occipital
-grey_matter_volume	temporal
-grey_matter_volume	limbic
-grey_matter_volume	cerebral_nuclei
-csf	ventricule
-white_matter_volume	BrainStem
-white_matter_volume	GlobalWhiteMatter
-white_matter_volume	CerebellumWhiteMatter
-white_matter_volume	OpticChiasmWhiteMatter
-white_matter_volume	diencephalon
-white_matter_volume	vessel
-brain_anatomy	grey_matter_volume
-brain_anatomy	csf
-brain_anatomy	white_matter_volume
-brain	brain_anatomy
-brain	grey_matter_surface
-root	no-group
-root	provenance
-root	brain_metabolism
-root	brain_scan
-root	clinical
-root	Date
-root	demographic
-root	genetic
-root	visit
-root	brain
-\.