build.sh

docker/README.md

docker/config/application.tmpl

pom.xml

src/main/java/eu/hbp/mip/MIPApplication.java

...ain/java/eu/hbp/mip/configuration/CacheConfiguration.java

.../java/eu/hbp/mip/configuration/SecurityConfiguration.java

...a/eu/hbp/mip/configurations/APIMetadataConfiguration.java

.../java/eu/hbp/mip/configurations/GalaxyAuthentication.java

...a/eu/hbp/mip/configurations/PersistenceConfiguration.java

...java/eu/hbp/mip/configurations/SecurityConfiguration.java

src/main/java/eu/hbp/mip/controllers/ActiveUserAPI.java

src/main/java/eu/hbp/mip/controllers/AlgorithmsAPI.java

src/main/java/eu/hbp/mip/controllers/ExperimentAPI.java

src/main/java/eu/hbp/mip/controllers/PathologiesAPI.java

src/main/java/eu/hbp/mip/controllers/SecurityApi.java

...ip/controllers/galaxy/retrofit/RetroFitGalaxyClients.java

src/main/java/eu/hbp/mip/model/DAOs/ArticleDAO.java

src/main/java/eu/hbp/mip/model/GeneralStats.java

src/main/java/eu/hbp/mip/model/UserInfo.java