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HBP Medical Informatics Platform
portal-backend
Commits
1099df4e
Commit
1099df4e
authored
8 years ago
by
Mirco Nasuti
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fixed exareme calls
parent
d8b27c08
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1 changed file
src/main/java/org/hbp/mip/controllers/ExperimentApi.java
+17
-43
17 additions, 43 deletions
src/main/java/org/hbp/mip/controllers/ExperimentApi.java
with
17 additions
and
43 deletions
src/main/java/org/hbp/mip/controllers/ExperimentApi.java
+
17
−
43
View file @
1099df4e
...
...
@@ -217,58 +217,32 @@ public class ExperimentApi {
new
Thread
()
{
public
void
run
()
{
try
{
/* Launch computation */
String
url
=
miningExaremeQueryUrl
+
"/"
+
algoCode
+
"/?format=true"
;
String
url
=
miningExaremeQueryUrl
+
"/"
+
algoCode
;
StringBuilder
results
=
new
StringBuilder
();
int
code
=
HTTPUtil
.
sendPost
(
url
,
jsonQuery
,
results
);
if
(
code
<
200
||
code
>
299
)
{
experiment
.
setHasError
(
true
);
experiment
.
setHasServerError
(
true
);
experiment
.
setResult
(
"Exareme returned code : "
+
code
);
}
JsonParser
parser
=
new
JsonParser
();
String
key
=
parser
.
parse
(
results
.
toString
()).
getAsJsonObject
().
get
(
"queryKey"
).
getAsString
();
/* Wait for result */
url
=
miningExaremeQueryUrl
+
"/"
+
key
+
"/status"
;
double
progress
=
0
;
while
(
progress
<
100
)
{
Thread
.
sleep
(
200
);
results
=
new
StringBuilder
();
code
=
HTTPUtil
.
sendPost
(
url
,
jsonQuery
,
results
);
if
(
code
<
200
||
code
>
299
)
{
experiment
.
setHasError
(
true
);
experiment
.
setHasServerError
(
true
);
experiment
.
setResult
(
"Exareme returned code : "
+
code
);
}
progress
=
parser
.
parse
(
results
.
toString
()).
getAsJsonObject
().
get
(
"status"
).
getAsDouble
();
}
/* Get result */
url
=
miningExaremeQueryUrl
+
"/"
+
key
+
"/result"
;
results
=
new
StringBuilder
();
code
=
HTTPUtil
.
sendPost
(
url
,
jsonQuery
,
results
);
experiment
.
setResult
(
results
.
toString
().
replace
(
"\0"
,
""
));
experiment
.
setHasError
(
code
>=
400
);
experiment
.
setHasServerError
(
code
>=
500
);
}
catch
(
UnknownHostException
uhe
)
{
uhe
.
printStackTrace
();
experiment
.
setHasError
(
true
);
experiment
.
setHasServerError
(
true
);
experiment
.
setResult
(
uhe
.
getMessage
());
}
catch
(
InterruptedException
e
)
{
e
.
printStackTrace
();
}
catch
(
Exception
e
)
{
e
.
printStackTrace
();
experiment
.
setHasError
(
true
);
experiment
.
setHasServerError
(
true
);
experiment
.
setResult
(
e
.
getMessage
());
}
experiment
.
setFinished
(
new
Date
());
try
{
Session
session
=
HibernateUtil
.
getSessionFactory
().
openSession
();
Transaction
transaction
=
session
.
beginTransaction
();
session
.
update
(
experiment
);
transaction
.
commit
();
session
.
close
();
}
catch
(
DataException
e
)
{
throw
e
;
}
}
}.
start
();
}
...
...
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