Tutorials

Grouped loosely by primary (but not exclusive!) focus, we have a set of tutorials to help you learn by doing.

You can find some examples of full Arbor simulations in the python/examples directory of the Arbor repository.

The examples use pandas, seaborn and LFPykit for analysis and plotting which are expected to be installed independently from Arbor.

In an interactive Python interpreter, you can use help() on any class or function to get its documentation. (Try, help(arbor.simulation), for example).

Cells

Recipes

Networks

Probes

Stochastic Mechanisms

Hardware

Advanced

Demonstrations

We try to collect models scientists have built in our contributor space. In addition to the tutorials, browsing these models should give you a good idea of what's possible with Arbor and find get in contact with other Arbor users.