Return morphology from `load_swc_xxx` (#1244) (c5b7da04) · Commits · arbor-sim / arbor · GitLab

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c5b7da04

Unverified Commit c5b7da04 authored 4 years ago by

Nora Abi Akar Committed by GitHub 4 years ago

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Return morphology from `load_swc_xxx` (#1244)

* Return `arb::morphology` from `load_swc_xxx` methods for consistency with the NeuroML interface. 
* Fix unit tests.
* Fix documentation

parent faccb4d3

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arborio/include/arborio/swcio.hpp 10 additions, 10 deletions

arborio/include/arborio/swcio.hpp
arborio/swcio.cpp 6 additions, 6 deletions

arborio/swcio.cpp
doc/concepts/morphology.rst 3 additions, 5 deletions

doc/concepts/morphology.rst
doc/cpp/cable_cell.rst 9 additions, 9 deletions

doc/cpp/cable_cell.rst
doc/python/morphology.rst 61 additions, 61 deletions

doc/python/morphology.rst
example/ring/branch_cell.hpp 1 addition, 1 deletion

example/ring/branch_cell.hpp
example/single/single.cpp 1 addition, 1 deletion

example/single/single.cpp
python/example/single_cell_swc.py 2 additions, 2 deletions

python/example/single_cell_swc.py
python/morphology.cpp 8 additions, 8 deletions

python/morphology.cpp
test/ubench/fvm_discretize.cpp 1 addition, 1 deletion

test/ubench/fvm_discretize.cpp
test/unit/test_morphology.cpp 1 addition, 5 deletions

test/unit/test_morphology.cpp
test/unit/test_swcio.cpp 299 additions, 216 deletions

test/unit/test_swcio.cpp

with 402 additions and 325 deletions

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