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Commit d5a7e7a8 authored by Maximilian Schmidt's avatar Maximilian Schmidt
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Explain infomap in README

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1 merge request!1Add all necessary files for the multi-area model
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figures/Schmidt2018_dyn/README.md
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...@@ -30,7 +30,7 @@ Reproducing the figures requires some additional Python packages listed in `addi ...@@ -30,7 +30,7 @@ Reproducing the figures requires some additional Python packages listed in `addi
The calculation of BOLD signals from the simulated firing rates for Fig. 8 requires an installation of R and the R library `neuRosim` (<https://cran.r-project.org/web/packages/neuRosim/index.html>). The calculation of BOLD signals from the simulated firing rates for Fig. 8 requires an installation of R and the R library `neuRosim` (<https://cran.r-project.org/web/packages/neuRosim/index.html>).
To produce Figure 8, an installation of the `infomap` package is required. Please follow the instructions on the website http://www.mapequation.org/code.html. To produce Figure 8, an installation of the `infomap` package is required. Please follow the instructions on the website http://www.mapequation.org/code.html . After installing `infomap`, please specify the path to the executable in `helpers.py`.
### Snakemake workflow ### Snakemake workflow
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