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Nora Abi Akar authored
* Replace TCLAP with tinyopt, remove TCLAP from `ext/`.
* Replace `sup/tinyopt.hpp` with copy of external tinyopt, update use of `tinyopt` in unit tests and examples to suit.
* Use tinyopt's 'smallopt' interface in `modcc`, `brunel` example.
* Update tinyopt interface in `single` example.
 Fix our attributions and add HBP acknowledgement

Addresses #557 #695 #803 
321a5a24

Arbor Library

Build Status

Arbor is a library for implementing performance portable network simulations of multi-compartment neuron models.

An installation guide and library documentation are available online at Read the Docs.

Submit a ticket if you have any questions or want help.

Citing Arbor

It is possible to cite specific versions of Arbor used to run a simulation via Zenodo:

  • Version 0.2: DOI
  • Version 0.1: DOI

The following BibTeX can be used to cite Arbor:

@INPROCEEDINGS{
    paper:arbor2019,
    author={N. A. {Akar} and B. {Cumming} and V. {Karakasis} and A. {Küsters} and W. {Klijn} and A. {Peyser} and S. {Yates}},
    booktitle={2019 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP)},
    title={{Arbor --- A Morphologically-Detailed Neural Network Simulation Library for Contemporary High-Performance Computing Architectures}},
    year={2019}, month={feb}, volume={}, number={},
    pages={274--282},
    doi={10.1109/EMPDP.2019.8671560},
    ISSN={2377-5750}}

Alternative citation formats for the paper can be downloaded here, and a preprint is available at arXiv.