diff --git a/deploy/datasets/query.js b/deploy/datasets/query.js
index a7233810b8fb0992de8ea56c7dcbc82fb9e9d653..1516c3e4559d579e2360e9c9b7374af30c8eb093 100644
--- a/deploy/datasets/query.js
+++ b/deploy/datasets/query.js
@@ -51,7 +51,7 @@ const fetchDatasetFromKg = async ({ user } = {}) => {
}
-const cacheData = ({results, ...rest}) => {
+const cacheData = ({ results, ...rest }) => {
cachedData = results
otherQueryResult = rest
return cachedData
@@ -83,7 +83,7 @@ const getPublicDs = async () => {
const getDs = ({ user }) => user
- ? fetchDatasetFromKg({ user }).then(({results}) => results)
+ ? fetchDatasetFromKg({ user }).then(({ results }) => results)
: getPublicDs()
/**
@@ -106,7 +106,7 @@ const readConfigFile = (filename) => new Promise((resolve, reject) => {
filepath = path.join(__dirname, '..', '..', 'src', 'res', 'ext', filename)
}
fs.readFile(filepath, 'utf-8', (err, data) => {
- if(err) reject(err)
+ if (err) reject(err)
resolve(data)
})
})
@@ -174,8 +174,8 @@ const filterByPRSet = (prs, atlasPrSet = new Set()) => {
return prs.some(({ name }) => atlasPrSet.has(name))
}
-const filter = (datasets = [], {templateName, parcellationName}) => datasets
- .filter(ds => commonSenseDsFilter({ds, templateName, parcellationName }))
+const filter = (datasets = [], { templateName, parcellationName }) => datasets
+ .filter(ds => commonSenseDsFilter({ ds, templateName, parcellationName }))
.filter(ds => {
if (/infant/.test(ds.name))
return false
@@ -227,7 +227,7 @@ exports.init = async () => {
}
exports.getDatasets = ({ templateName, parcellationName, user }) => getDs({ user })
- .then(json => filter(json, {templateName, parcellationName}))
+ .then(json => filter(json, { templateName, parcellationName }))
exports.getPreview = ({ datasetName, templateSelected }) => getPreviewFile({ datasetName, templateSelected })
@@ -236,73 +236,99 @@ exports.getPreview = ({ datasetName, templateSelected }) => getPreviewFile({ dat
* change to real spatial query
*/
const cachedMap = new Map()
-const fetchSpatialDataFromKg = async ({ templateName, queryArg, user }) => {
- try {
- const filename = path.join(STORAGE_PATH, templateName + '.json')
- const exists = fs.existsSync(filename)
- if (!exists)
- return []
-
-
- const data = fs.readFileSync(filename, 'utf-8')
- const json = JSON.parse(data)
- const coordsString = queryArg.split('__');
- const boundingBoxCorners = coordsString.map(coordString => coordString.split('_'))
-
- if (templateName !== 'Waxholm Space rat brain atlas v.2.0') {
- return json.filter(filterByqueryArg(boundingBoxCorners))
- } else {
- const boundingBoxInWaxhomV2VoxelSpace = boundingBoxCorners.map(transformWaxholmV2NmToVoxel)
- const { total = 0 } = await getSpatialSearchOk({boundingBoxInWaxhomV2VoxelSpace, user})
- if (total > 0) {
- return json.filter(filterByqueryArg(boundingBoxCorners))
- } else {
- return []
- }
+/**
+ * TODO change to URL constructor to improve readability
+ */
+const spatialQuery = 'https://kg.humanbrainproject.eu/query/neuroglancer/seeg/coordinate/v1.0.0/spatialWithCoordinatesNG/instances?vocab=https%3A%2F%2Fschema.hbp.eu%2FmyQuery%2F'
+
+const getXformFn = (templateSpace) => {
+ const _ = {}
+ switch(templateSpace){
+ case 'Waxholm Space rat brain atlas v.2.0':
+ _['nmToVoxel'] = transformWaxholmV2NmToVoxel
+ _['voxelToNm'] = transformWaxholmV2VoxelToNm
+ break;
+ default: {
+ _['nmToVoxel'] = defaultXform
+ _['voxelToNm'] = defaultXform
}
- } catch (e) {
- console.log('datasets#query.js#fetchSpatialDataFromKg', 'read file and parse json failed', e)
- return []
}
+ return _
}
-exports.getSpatialDatasets = async ({ templateName, queryGeometry, queryArg, user }) => {
- return await fetchSpatialDataFromKg({ templateName, queryArg, user })
-}
+const getSpatialSearcParam = ({ templateName, queryArg }) => {
+ let kgSpaceName
+ const { nmToVoxel } = getXformFn(templateName)
+ const coordsString = queryArg.split('__');
+ const boundingBoxCorners = coordsString.map(coordString => coordString.split('_'))
+ const bbInVoxelSpace = boundingBoxCorners.map(nmToVoxel)
-function filterByqueryArg(cubeDots) {
- return function (item) {
- const px = item.geometry.position[0]
- const py = item.geometry.position[1]
- const pz = item.geometry.position[2]
- if (cubeDots[0][0] <= px && px <= cubeDots[1][0]
- && cubeDots[0][1] <= py && py <= cubeDots[1][1]
- && cubeDots[0][2] <= pz && pz <= cubeDots[1][2]) {
- return true
- }
- return false
- }
+ switch (templateName){
+ case 'Waxholm Space rat brain atlas v.2.0':
+ kgSpaceName = 'waxholmV2'
+ break;
+ default:
+ kgSpaceName = templateName
+ }
+ return {
+ boundingBox: `${kgSpaceName}:${bbInVoxelSpace.map(v => v.join(',')).join(',')}`
+ }
}
+const fetchSpatialDataFromKg = async ({ templateName, queryGeometry, queryArg, user }) => {
-async function getSpatialSearchOk({ user, boundingBoxInWaxhomV2VoxelSpace }) {
+ const { releasedOnly, option } = await getUserKGRequestParam({ user })
- const { releasedOnly, option } = await getUserKGRequestParam({ user })
+ const _ = getSpatialSearcParam({ templateName, queryGeometry, queryArg })
+ const url = require('url')
+ const search = new url.URLSearchParams()
+
+ for (let key in _) {
+ search.append(key, _[key])
+ }
+ if (releasedOnly) search.append('databaseScope', 'RELEASED')
+
+ const _url = `${spatialQuery}&${search.toString()}`
+ return await new Promise((resolve, reject) => {
+ request(_url, option, (err, resp, body) => {
+ if (err)
+ return reject(err)
+ if (resp.statusCode >= 400) {
+ return reject(resp.statusCode)
+ }
+ const json = JSON.parse(body)
- const spatialQuery = 'https://kg.humanbrainproject.org/query/minds/core/dataset/v1.0.0/spatialSimple/instances?size=10'
+ const { voxelToNm } = getXformFn(templateName)
+
+ const _ = json.results.map(({ name, coordinates, dataset}) => {
+ return {
+ name,
+ templateSpace: templateName,
+ dataset: dataset.map(ds => ds = {name: ds.name, externalLink: 'https://kg.humanbrainproject.eu/instances/Dataset/' + ds.identifier}),
+ geometry: {
+ type: 'point',
+ space: 'real',
+ position: voxelToNm([
+ coordinates[0].x,
+ coordinates[0].y,
+ coordinates[0].z
+ ])
+ }
+ }
+ })
- return await new Promise((resolve, reject) => {
- request(`${spatialQuery}&boundingBox=waxholmV2:${boundingBoxInWaxhomV2VoxelSpace.map(cornerCoord => cornerCoord.join(',')).join(',')}${releasedOnly ? '&databaseScope=RELEASED' : ''}`, option, (err, resp, body) => {
- if (err)
- return reject(err)
- if (resp.statusCode >= 400)
- return reject(resp.statusCode)
- const json = JSON.parse(body)
- return resolve(json)
- })
+ return resolve(_)
})
+ })
+}
+
+exports.getSpatialDatasets = async ({ templateName, queryGeometry, queryArg, user }) => {
+ /**
+ * Local data can be injected here
+ */
+ return await fetchSpatialDataFromKg({ templateName, queryGeometry, queryArg, user })
}
let publicAccessToken
@@ -319,7 +345,7 @@ async function getUserKGRequestParam({ user }) {
const option = accessToken || publicAccessToken
? {
auth: {
- 'bearer': accessToken || publicAccessToken
+ 'bearer': accessToken || publicAccessToken || process.env.ACCESS_TOKEN
}
}
: {}
@@ -332,7 +358,8 @@ async function getUserKGRequestParam({ user }) {
}
/**
- *
+ * perhaps export the xform fns into a different module
+ * ideally, in the future, KG can handle xform of voxel to nm
*/
const transformWaxholmV2NmToVoxel = (coord) => {
/**
@@ -343,15 +370,22 @@ const transformWaxholmV2NmToVoxel = (coord) => {
* atlas viewer applies translation (below in nm) in order to center the brain
* query already translates nm to mm, so the unit of transl should be [mm, mm, mm]
*/
- const transl = [-9550781,-24355468,-9707031].map(v => v / 1e6)
-
+ const transl = [-9550781, -24355468, -9707031].map(v => v / 1e6)
+
/**
* mm/voxel
*/
const voxelDim = [0.0390625, 0.0390625, 0.0390625]
- return coord.map((v, idx) => (v - transl[idx]) / voxelDim[idx] )
+ return coord.map((v, idx) => (v - transl[idx]) / voxelDim[idx])
+}
+
+const transformWaxholmV2VoxelToNm = (coord) => {
+ const transl = [-9550781, -24355468, -9707031].map(v => v / 1e6)
+ const voxelDim = [0.0390625, 0.0390625, 0.0390625]
+ return coord.map((v, idx) => (v * voxelDim[idx]) + transl[idx])
}
+const defaultXform = (coord) => coord
const getDatasetFromId = async ({ user, kgId, returnAsStream = false }) => {
const { option, releasedOnly } = await getUserKGRequestParam({ user })
const _url = getKgQuerySingleDatasetUrl({ kgId })
@@ -385,4 +419,4 @@ const getDatasetFileAsZip = async ({ user, kgId } = {}) => {
}
exports.getDatasetFromId = getDatasetFromId
-exports.getDatasetFileAsZip = getDatasetFileAsZip
\ No newline at end of file
+exports.getDatasetFileAsZip = getDatasetFileAsZip
diff --git a/src/atlasViewer/atlasViewer.component.ts b/src/atlasViewer/atlasViewer.component.ts
index 954559f4d3a8d232f5732b4cbe7c128e890a443f..a1175088db8d56f6f0a879ef5c2e40b439db917e 100644
--- a/src/atlasViewer/atlasViewer.component.ts
+++ b/src/atlasViewer/atlasViewer.component.ts
@@ -78,7 +78,8 @@ export class AtlasViewer implements OnDestroy, OnInit, AfterViewInit {
public dedicatedView$: Observable<string | null>
public onhoverSegments$: Observable<string[]>
public onhoverSegmentsForFixed$: Observable<string[]>
- public onhoverLandmark$ : Observable<string | null>
+ public onhoverLandmarksForFixed$: Observable<any>
+ public onhoverLandmark$ : Observable<{landmarkName: string, datasets: any} | null>
private subscriptions: Subscription[] = []
/* handlers for nglayer */
@@ -185,7 +186,11 @@ export class AtlasViewer implements OnDestroy, OnInit, AfterViewInit {
const idx = Number(landmark.replace('label=',''))
if(isNaN(idx))
return `Landmark index could not be parsed as a number: ${landmark}`
- return spatialDatas[idx].name
+ return {
+ landmarkName: spatialDatas[idx].name,
+ datasets: (spatialDatas[idx].dataset
+ && spatialDatas[idx].dataset.length)? spatialDatas[idx].dataset : null
+ }
})
)
@@ -376,6 +381,11 @@ export class AtlasViewer implements OnDestroy, OnInit, AfterViewInit {
map(([_flag, onhoverSegments]) => onhoverSegments || [])
)
+ this.onhoverLandmarksForFixed$ = this.rClContextualMenu.onShow.pipe(
+ withLatestFrom(this.onhoverLandmark$),
+ map(([_flag, onhoverLandmark]) => onhoverLandmark || [])
+ )
+
this.closeMenuWithSwipe(this.mobileSideNav)
}
@@ -474,6 +484,11 @@ export class AtlasViewer implements OnDestroy, OnInit, AfterViewInit {
}
}
+ openLandmarkUrl(dataset) {
+ this.rClContextualMenu.hide()
+ window.open(dataset.externalLink, "_blank")
+ }
+
@HostBinding('attr.version')
public _version : string = VERSION
diff --git a/src/atlasViewer/atlasViewer.template.html b/src/atlasViewer/atlasViewer.template.html
index 8c441aab203e4b66cb812d7408381be8e30fd300..429869cf77846acea64457a1b8cdbf52c32b4ad5 100644
--- a/src/atlasViewer/atlasViewer.template.html
+++ b/src/atlasViewer/atlasViewer.template.html
@@ -156,13 +156,30 @@
class="p-2">
Search for data relating to:
</div>
+
+ <div *ngIf="(onhoverLandmarksForFixed$ | async) as onhoverLandmarksForFixed">
+ <div *ngIf="onhoverLandmarksForFixed && onhoverLandmarksForFixed.datasets && onhoverLandmarksForFixed.datasets.length > 0">
+ <div class="p-2">
+ Explore datasets for {{onhoverLandmarksForFixed.landmarkName}}
+ </div>
+ <div
+ *ngFor="let dataset of onhoverLandmarksForFixed.datasets"
+ class="ws-no-wrap text-left pe-all btn btn-sm btn-secondary btn-block mt-0"
+ data-toggle="tooltip"
+ data-placement="top"
+ (click)="openLandmarkUrl(dataset)"
+ [title]="dataset.name">
+ {{ dataset.name }} <i class="fas fa-external-link-alt"></i>
+ </div>
+ </div>
+ </div>
<div
*ngFor="let onhoverSegmentFixed of (onhoverSegmentsForFixed$ | async)"
(click)="searchRegion([onhoverSegmentFixed])"
class="ws-no-wrap text-left pe-all btn btn-sm btn-secondary btn-block mt-0"
- data-toggle="tooltip"
- data-placement="top"
+ data-toggle="tooltip"
+ data-placement="top"
[title]="onhoverSegmentFixed.name">
<small class="text-semi-transparent">(hovering)</small> {{ onhoverSegmentFixed.name }}
</div>
@@ -178,10 +195,10 @@
<small class="text-semi-transparent">(selected)</small> {{ selectedRegions[0].name }}
</ng-container>
</div>
-
+
<div
class="p-2 text-muted"
- *ngIf="(onhoverSegmentsForFixed$ | async)?.length === 0 && (selectedRegions$ | async)?.length === 0">
+ *ngIf="(onhoverSegmentsForFixed$ | async)?.length === 0 && (selectedRegions$ | async)?.length === 0 && (onhoverLandmarksForFixed$ | async)?.length === 0">
Right click on a parcellation region or select parcellation regions to search KG for associated datasets.
</div>
@@ -197,12 +214,12 @@
</panel-component>
<div floatingMouseContextualContainer floatingMouseContextualContainerDirective>
- <div
- *ngIf="onhoverLandmark$ | async"
+ <div
+ *ngIf="onhoverLandmark$ | async"
contextualBlock>
- {{ onhoverLandmark$ | async }} <i><small class = "mute-text">{{ toggleMessage }}</small></i>
+ {{ (onhoverLandmark$ | async)?.landmarkName }} <i><small class = "mute-text">{{ toggleMessage }}</small></i>
</div>
- <div
+ <div
*ngIf="onhoverSegments$ | async; let onhoverSegments"
contextualBlock>
<div
diff --git a/src/res/ext/waxholmRatV2_0.json b/src/res/ext/waxholmRatV2_0.json
index c4cf6171da1c2200dc096d378f59dea0ac2e1e49..df036fb15d79cd07639803e9520a10372131b849 100644
--- a/src/res/ext/waxholmRatV2_0.json
+++ b/src/res/ext/waxholmRatV2_0.json
@@ -1 +1,1651 @@
-{"name":"Waxholm Space rat brain atlas v.2.0","type":"template","species":"Rat","useTheme":"dark","nehubaConfigURL":"nehubaConfig/waxholmRatV2_0NehubaConfig","parcellations":[{"ngId":"whole","type":"parcellation","name":"Waxholm Space rat brain atlas v.2.0","regions":[{"name":"Whole Brain (V2.0)","labelIndex":null,"rgb":null,"children":[{"name":"White matter","description":null,"parent_name":null,"synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"corpus callosum and associated subcortical white matter","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":67,"rgb":[255,110,0],"children":null},{"name":"Anterior commissure","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"anterior commissure, anterior part","description":null,"parent_name":"Anterior commissure","synonyms":[""],"acronyms":[""],"labelIndex":36,"rgb":[124,252,0],"children":null},{"name":"anterior commissure, posterior part","description":null,"parent_name":"Anterior commissure","synonyms":[""],"acronyms":[""],"labelIndex":37,"rgb":[255,186,0],"children":null},{"name":"anterior commissure, intrabulbar part","description":null,"parent_name":"Anterior commissure","synonyms":[""],"acronyms":[""],"labelIndex":73,"rgb":[255,79,206],"children":null}]},{"name":"Hippocampal white matter","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"alveus of the hippocampus","description":null,"parent_name":"Hippocampal white matter","synonyms":[""],"acronyms":[""],"labelIndex":6,"rgb":[255,0,255],"children":null},{"name":"ventral hippocampal commissure","description":null,"parent_name":"Hippocampal white matter","synonyms":[""],"acronyms":[""],"labelIndex":38,"rgb":[174,0,232],"children":null},{"name":"fornix","description":null,"parent_name":"Hippocampal white matter","synonyms":[""],"acronyms":[""],"labelIndex":52,"rgb":[21,192,255],"children":null},{"name":"fimbria of the hippocampus","description":null,"parent_name":"Hippocampal white matter","synonyms":[""],"acronyms":[""],"labelIndex":59,"rgb":[0,255,29],"children":null}]},{"name":"Corticofugal pathways","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"corticofugal pathways","description":null,"parent_name":"Corticofugal pathways","synonyms":[""],"acronyms":[""],"labelIndex":1,"rgb":[255,52,39],"children":null},{"name":"pyramidal decussation","description":null,"parent_name":"Corticofugal pathways","synonyms":[""],"acronyms":[""],"labelIndex":85,"rgb":[114,9,212],"children":null}]},{"name":"Medial lemniscus","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"medial lemniscus","description":null,"parent_name":"Medial lemniscus","synonyms":[""],"acronyms":[""],"labelIndex":34,"rgb":[212,255,0],"children":null},{"name":"medial lemniscus decussation","description":null,"parent_name":"Medial lemniscus","synonyms":[""],"acronyms":[""],"labelIndex":84,"rgb":[65,150,255],"children":null}]},{"name":"Thalamic tracts","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"mammillothalamic tract","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":53,"rgb":[238,186,0],"children":null},{"name":"commissural stria terminalis","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":54,"rgb":[173,255,47],"children":null},{"name":"fasciculus retroflexus","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":60,"rgb":[244,67,69],"children":null},{"name":"stria medullaris of the thalamus","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":61,"rgb":[255,252,0],"children":null},{"name":"stria terminalis","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":62,"rgb":[238,117,51],"children":null},{"name":"habenular commissure","description":null,"parent_name":"Thalamic tracts","synonyms":[""],"acronyms":[""],"labelIndex":80,"rgb":[69,235,202],"children":null}]},{"name":"posterior commissure","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":63,"rgb":[255,0,218],"children":null},{"name":"Facial nerve","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"facial nerve","description":null,"parent_name":"Facial nerve","synonyms":[""],"acronyms":[""],"labelIndex":35,"rgb":[0,176,63],"children":null},{"name":"ascending fibers of the facial nerve","description":null,"parent_name":"Facial nerve","synonyms":[""],"acronyms":[""],"labelIndex":72,"rgb":[179,28,53],"children":null},{"name":"genu of the facial nerve","description":null,"parent_name":"Facial nerve","synonyms":[""],"acronyms":[""],"labelIndex":57,"rgb":[250,244,247],"children":null}]},{"name":"Optic fiber system and supraoptic decussation","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"optic nerve","description":null,"parent_name":"Optic fiber system and supraoptic decussation","synonyms":[""],"acronyms":[""],"labelIndex":41,"rgb":[48,218,0],"children":null},{"name":"optic tract and optic chiasm","description":null,"parent_name":"Optic fiber system and supraoptic decussation","synonyms":[""],"acronyms":[""],"labelIndex":42,"rgb":[38,126,255],"children":null},{"name":"supraoptic decussation","description":null,"parent_name":"Optic fiber system and supraoptic decussation","synonyms":[""],"acronyms":[""],"labelIndex":83,"rgb":[250,170,64],"children":null}]},{"name":"spinal trigeminal tract","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":76,"rgb":[250,128,114],"children":null},{"name":"White matter of the tectum","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"commissure of the superior colliculus","description":null,"parent_name":"White matter of the tectum","synonyms":[""],"acronyms":[""],"labelIndex":46,"rgb":[33,230,255],"children":null},{"name":"brachium of the superior colliculus","description":null,"parent_name":"White matter of the tectum","synonyms":[""],"acronyms":[""],"labelIndex":68,"rgb":[188,32,173],"children":null},{"name":"commissure of the inferior colliculus","description":null,"parent_name":"White matter of the tectum","synonyms":[""],"acronyms":[""],"labelIndex":69,"rgb":[147,255,39],"children":null}]},{"name":"Cerebellar and precerebellar white matter","description":null,"parent_name":"White matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"inferior cerebellar peduncle","description":null,"parent_name":"Cerebellar and precerebellar white matter","synonyms":[""],"acronyms":[""],"labelIndex":7,"rgb":[52,255,13],"children":null},{"name":"middle cerebellar peduncle","description":null,"parent_name":"Cerebellar and precerebellar white matter","synonyms":[""],"acronyms":[""],"labelIndex":78,"rgb":[134,204,76],"children":null},{"name":"transverse fibers of the pons","description":null,"parent_name":"Cerebellar and precerebellar white 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hippocampus","description":null,"parent_name":"Gray matter","synonyms":[""],"acronyms":[""],"labelIndex":null,"rgb":null,"children":[{"name":"frontal association cortex","description":null,"parent_name":"Cerebral cortex including the neocortex and the hippocampus","synonyms":[""],"acronyms":[""],"labelIndex":77,"rgb":[206,211,7],"children":null},{"name":"neocortex","description":null,"parent_name":"Cerebral cortex including the neocortex and the hippocampus","synonyms":[""],"acronyms":[""],"labelIndex":92,"rgb":[3,193,45],"children":null},{"name":"cingulate cortex, area 2","description":null,"parent_name":"Cerebral cortex including the neocortex and the hippocampus","synonyms":[""],"acronyms":[""],"labelIndex":10,"rgb":[29,104,235],"children":null},{"name":"cornu ammonis 1","description":null,"parent_name":"Cerebral cortex including the neocortex and the hippocampus","synonyms":[],"acronyms":[""],"labelIndex":95,"rgb":[165,131,107],"children":null},{"name":"dentate 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+}
\ No newline at end of file