diff --git a/src/index.html b/src/index.html
index 33f639768ead42863363f62c8da4ee34a1a135b8..ef550de054bbafdb72382b29563055a3578e9d8e 100644
--- a/src/index.html
+++ b/src/index.html
@@ -11,6 +11,10 @@
</head>
<body>
<atlas-viewer>
+ Loading the atlas viewer
+ <span class = "homeAnimationDots loadingAnimationDots">•</span>
+ <span class = "homeAnimationDots loadingAnimationDots">•</span>
+ <span class = "homeAnimationDots loadingAnimationDots">•</span>
</atlas-viewer>
</body>
</html>
\ No newline at end of file
diff --git a/src/res/css/extra_styles.css b/src/res/css/extra_styles.css
index 82f035c9b53fa6c29a1e7b7471e654954633b3b2..ae82ca6de0b4b5270650f9f635e0128a6a92aa43 100644
--- a/src/res/css/extra_styles.css
+++ b/src/res/css/extra_styles.css
@@ -145,3 +145,75 @@ markdown-dom pre code
{
width:1em;
}
+
+@keyframes explode
+{
+ 0% {
+ opacity: 0.0;
+ }
+ 30% {
+ opacity: 1.0
+ }
+ 100% {
+ opacity: 0.0;
+ }
+}
+
+.loadingAnimationDots:nth-child(1)
+{
+ animation: explode 1s ease infinite running;
+}
+.loadingAnimationDots:nth-child(2)
+{
+ animation: explode 1s ease 0.2s infinite running;
+}
+.loadingAnimationDots:nth-child(3)
+{
+ animation: explode 1s ease 0.4s infinite running;
+}
+.loadingAnimationDots:nth-child(4)
+{
+ animation: explode 1s ease 0.6s infinite running;
+}
+.loadingAnimationDots:nth-child(5)
+{
+ animation: explode 1s ease 0.8s infinite running;
+}
+
+.homeAnimationDots:nth-child(1)
+{
+ color: red;
+}
+.homeAnimationDots:nth-child(2)
+{
+ color: blue;
+}
+.homeAnimationDots:nth-child(3)
+{
+ color: green;
+}
+
+@keyframes spinning
+{
+ from {
+ transform: rotate(0deg);
+ }
+ to{
+ transform: rotate(359deg);
+ }
+}
+
+#homeSpinning
+{
+ font-size: 200%;
+}
+
+.spinnerAnimationCircle
+{
+ width: 1em;
+ height:1em;
+ border-radius: 50%;
+ border: 0.2em rgba(128,128,128,0.2) solid;
+ border-top: 0.2em rgba(128,128,128,0.99) solid;
+ animation: spinning 700ms linear infinite running;
+}
\ No newline at end of file
diff --git a/src/ui/nehubaContainer/nehubaContainer.component.ts b/src/ui/nehubaContainer/nehubaContainer.component.ts
index 5946378929aa3148052f86ffeeef4ae632d264aa..71b944c9fba29764ab9e7a1b77eb8886a97cec11 100644
--- a/src/ui/nehubaContainer/nehubaContainer.component.ts
+++ b/src/ui/nehubaContainer/nehubaContainer.component.ts
@@ -27,6 +27,11 @@ export class NehubaContainer implements OnInit, OnDestroy{
public viewerLoaded : boolean = false
+ public sliceViewLoading0$: Observable<boolean>
+ public sliceViewLoading1$: Observable<boolean>
+ public sliceViewLoading2$: Observable<boolean>
+ public perspectiveViewLoading$: Observable<string|null>
+
private newViewer$ : Observable<any>
private selectedParcellation$ : Observable<any>
private selectedRegions$ : Observable<any[]>
@@ -47,7 +52,7 @@ export class NehubaContainer implements OnInit, OnDestroy{
private ngLayersRegister : NgViewerStateInterface = {layers : [], forceShowSegment: null}
private ngLayers$ : Observable<NgViewerStateInterface>
- private selectedParcellationNgId : string
+
public selectedParcellation : any | null
private cr : ComponentRef<NehubaViewerUnit>
@@ -161,6 +166,12 @@ export class NehubaContainer implements OnInit, OnDestroy{
.pipe(
scan((acc:Event[],event:Event)=>{
const target = (event as Event).target as HTMLElement
+ /**
+ * 0 | 1
+ * 2 | 3
+ *
+ * 4 ???
+ */
const key = target.offsetLeft < 5 && target.offsetTop < 5 ?
0 :
target.offsetLeft > 5 && target.offsetTop < 5 ?
@@ -186,6 +197,60 @@ export class NehubaContainer implements OnInit, OnDestroy{
[0,1,2].forEach(idx=>this.nanometersToOffsetPixelsFn[idx] = (events[idx] as any).detail.nanometersToOffsetPixels)
})
+ this.sliceViewLoading0$ = fromEvent(this.elementRef.nativeElement, 'sliceRenderEvent')
+ .pipe(
+ filter((event:Event) => (event.target as HTMLElement).offsetLeft < 5 && (event.target as HTMLElement).offsetTop < 5),
+ map(event => {
+ const e = (event as any);
+ const num1 = typeof e.detail.missingChunks === 'number' ? e.detail.missingChunks : 0
+ const num2 = typeof e.detail.missingImageChunks === 'number' ? e.detail.missingImageChunks : 0
+ return Math.max(num1, num2) > 0
+ })
+ )
+
+ this.sliceViewLoading1$ = fromEvent(this.elementRef.nativeElement, 'sliceRenderEvent')
+ .pipe(
+ filter((event:Event) => (event.target as HTMLElement).offsetLeft > 5 && (event.target as HTMLElement).offsetTop < 5),
+ map(event => {
+ const e = (event as any);
+ const num1 = typeof e.detail.missingChunks === 'number' ? e.detail.missingChunks : 0
+ const num2 = typeof e.detail.missingImageChunks === 'number' ? e.detail.missingImageChunks : 0
+ return Math.max(num1, num2) > 0
+ })
+ )
+
+ this.sliceViewLoading2$ = fromEvent(this.elementRef.nativeElement, 'sliceRenderEvent')
+ .pipe(
+ filter((event:Event) => (event.target as HTMLElement).offsetLeft < 5 && (event.target as HTMLElement).offsetTop > 5),
+ map(event => {
+ const e = (event as any);
+ const num1 = typeof e.detail.missingChunks === 'number' ? e.detail.missingChunks : 0
+ const num2 = typeof e.detail.missingImageChunks === 'number' ? e.detail.missingImageChunks : 0
+ return Math.max(num1, num2) > 0
+ })
+ )
+
+ /* missing chunk perspective view */
+ this.perspectiveViewLoading$ = fromEvent(this.elementRef.nativeElement, 'perpspectiveRenderEvent')
+ .pipe(
+ filter(event => isDefined(event) && isDefined((event as any).detail) && isDefined((event as any).detail.lastLoadedMeshId) ),
+ map(event => {
+
+ const e = (event as any)
+ const lastLoadedIdString = e.detail.lastLoadedMeshId.split(',')[0]
+ const lastLoadedIdNum = Number(lastLoadedIdString)
+ return e.detail.meshesLoaded >= this.regionsLabelIndexMap.size
+ ? null
+ : isNaN(lastLoadedIdNum)
+ ? 'Loading unknown chunk'
+ : lastLoadedIdNum >= 65500
+ ? 'Loading auxiliary chunk'
+ : this.regionsLabelIndexMap.get(lastLoadedIdNum)
+ ? `Loading ${this.regionsLabelIndexMap.get(lastLoadedIdNum).name}`
+ : 'Loading unknown chunk ...'
+ })
+ )
+
this.combinedSpatialData$ = combineLatest(
combineLatest(
this.fetchedSpatialDatasets$,
@@ -397,13 +462,6 @@ export class NehubaContainer implements OnInit, OnDestroy{
return pos
}
- // get combinedSpatialData$(){
- // return (this.fetchedSpatialData
- // .filter(() => this.spatialResultsVisible)
- // .map(v => Object.assign({}, v, {type: 'spatial'})) as any[])
- // .concat(this.userLandmarks.map(v => Object.assign({}, v, {type: 'user'})))
- // }
-
getPositionX(quadrant:number,data:any){
return this.returnTruePos(quadrant,data)[0]
}
@@ -426,7 +484,6 @@ export class NehubaContainer implements OnInit, OnDestroy{
this.regionsLabelIndexMap = getLabelIndexMap(parcellation.regions)
this.nehubaViewer.regionsLabelIndexMap = this.regionsLabelIndexMap
this.nehubaViewer.parcellationId = parcellation.ngId
- this.selectedParcellationNgId = parcellation.ngId
this.selectedParcellation = parcellation
}
diff --git a/src/ui/nehubaContainer/nehubaContainer.style.css b/src/ui/nehubaContainer/nehubaContainer.style.css
index 83626740a863fcb0fe0935da2d6b6e0def360d04..ac5c9d8051e1cc251923a643935a5afca9e5b862 100644
--- a/src/ui/nehubaContainer/nehubaContainer.style.css
+++ b/src/ui/nehubaContainer/nehubaContainer.style.css
@@ -107,4 +107,33 @@ div[linksContainer]
{
display:inline-block;
margin-left:1em;
+}
+
+div[landmarkMasterContainer] > div > [landmarkContainer] > div.loadingIndicator
+{
+ left: auto;
+ top: auto;
+ right: 0;
+ bottom: 0;
+ margin-right: 0.2em;
+ margin-bottom: 0.2em;
+ width: 100%;
+ height:2em;
+ display: flex;
+ flex-direction: row-reverse;
+}
+
+div.loadingIndicator div.spinnerAnimationCircle
+{
+ font-size:150%;
+}
+
+[perspectiveLoadingText]
+{
+ margin-right: 1em;
+}
+
+:host-context([darktheme="true"]) [perspectiveLoadingText]
+{
+ color:rgba(255,255,255,0.8);
}
\ No newline at end of file
diff --git a/src/ui/nehubaContainer/nehubaContainer.template.html b/src/ui/nehubaContainer/nehubaContainer.template.html
index 0e22c32670f78cf2a0dd46398550e90fff6b7eda..2d2c633e76a8e16d0b1035d416b3313ffffb4da2 100644
--- a/src/ui/nehubaContainer/nehubaContainer.template.html
+++ b/src/ui/nehubaContainer/nehubaContainer.template.html
@@ -20,6 +20,12 @@
[positionY] = "getPositionY(0,spatialData)"
[positionZ] = "getPositionZ(0,spatialData)">
</nehuba-2dlandmark-unit>
+
+ <div *ngIf = "sliceViewLoading0$ | async" class = "loadingIndicator">
+ <div class = "spinnerAnimationCircle">
+
+ </div>
+ </div>
</layout-floating-container>
</div>
<div>
@@ -36,6 +42,11 @@
[positionY] = "getPositionY(1,spatialData)"
[positionZ] = "getPositionZ(1,spatialData)">
</nehuba-2dlandmark-unit>
+ <div *ngIf = "sliceViewLoading1$ | async" class = "loadingIndicator">
+ <div class = "spinnerAnimationCircle">
+
+ </div>
+ </div>
</layout-floating-container>
</div>
<div>
@@ -52,12 +63,23 @@
[positionY] = "getPositionY(2,spatialData)"
[positionZ] = "getPositionZ(2,spatialData)">
</nehuba-2dlandmark-unit>
+ <div *ngIf = "sliceViewLoading2$ | async" class = "loadingIndicator">
+ <div class = "spinnerAnimationCircle">
+
+ </div>
+ </div>
</layout-floating-container>
</div>
<div>
<layout-floating-container
pos11
landmarkContainer>
+ <div *ngIf = "perspectiveViewLoading$ | async" class = "loadingIndicator">
+ <div class = "spinnerAnimationCircle"></div>
+ <div perspectiveLoadingText>
+ {{ perspectiveViewLoading$ | async }}
+ </div>
+ </div>
</layout-floating-container>
</div>
</div>
diff --git a/src/ui/nehubaContainer/nehubaViewer/nehubaViewer.component.ts b/src/ui/nehubaContainer/nehubaViewer/nehubaViewer.component.ts
index 53e26e19d4fdaf04f3fa05b5ba18561024e38a5e..fdc89f2940b3b53d5ae5245863568c3cf6a9ffdf 100644
--- a/src/ui/nehubaContainer/nehubaViewer/nehubaViewer.component.ts
+++ b/src/ui/nehubaContainer/nehubaViewer/nehubaViewer.component.ts
@@ -87,12 +87,10 @@ export class NehubaViewerUnit implements AfterViewInit,OnDestroy{
public mouseOverSegment : number | null
ngAfterViewInit(){
- this.nehubaViewer = export_nehuba.createNehubaViewer(this.config,(err)=>{
+ this.nehubaViewer = export_nehuba.createNehubaViewer(this.config, (err)=>{
/* print in debug mode */
+ console.log('xgui3783', err)
});
-
- // console.log(export_nehuba)
- (<any>window).quat = export_nehuba.quat
if(this.regionsLabelIndexMap){
const managedLayers = this.nehubaViewer.ngviewer.layerManager.managedLayers
@@ -487,7 +485,8 @@ export interface ViewerState{
}
export function getAuxilliaryLabelIndices(){
- return Array.from(Array(36)).map((_,i)=>65500+i)
+ return [65535]
+ // return Array.from(Array(36)).map((_,i)=>65500+i)
}
export const ICOSAHEDRON = `# vtk DataFile Version 2.0