From 8d1ad67ecacda65d9189d5b4206c34f80812c69a Mon Sep 17 00:00:00 2001
From: Xiao Gui <xgui3783@gmail.com>
Date: Wed, 24 Mar 2021 11:55:27 +0100
Subject: [PATCH] bugfix: e2e chore: remove unused
---
src/res/ext/MNI152NehubaConfig.json | 4 +-
src/res/ext/freesurfer.json | 18 +-
src/res/ext/swmAggregatedData.json.bak | 2868 ------------------------
3 files changed, 11 insertions(+), 2879 deletions(-)
delete mode 100644 src/res/ext/swmAggregatedData.json.bak
diff --git a/src/res/ext/MNI152NehubaConfig.json b/src/res/ext/MNI152NehubaConfig.json
index a1f6f3e44..ead7dfe52 100644
--- a/src/res/ext/MNI152NehubaConfig.json
+++ b/src/res/ext/MNI152NehubaConfig.json
@@ -251,7 +251,7 @@
"MNI152_V25_RIGHT_NG_SPLIT_HEMISPHERE": {
"type": "segmentation",
"visible": true,
- "source": "precomputed://https://neuroglancer-dev.humanbrainproject.eu/precomputed/data-repo-ng-bot/JulichBrainV2_5_3/precomputed/JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_453c4c95827e38dcce5372b200065cba",
+ "source": "precomputed://https://neuroglancer.humanbrainproject.eu/precomputed/data-repo-ng-bot/JulichBrainV2_5_3/precomputed/JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_453c4c95827e38dcce5372b200065cba",
"transform": [
[
1,
@@ -282,7 +282,7 @@
"MNI152_V25_LEFT_NG_SPLIT_HEMISPHERE": {
"type": "segmentation",
"visible": true,
- "source": "precomputed://https://neuroglancer-dev.humanbrainproject.eu//precomputed/data-repo-ng-bot/JulichBrainV2_5_3/precomputed/JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_3f5ec6016bc2242769c41befdbc1b2e0",
+ "source": "precomputed://https://neuroglancer.humanbrainproject.eu//precomputed/data-repo-ng-bot/JulichBrainV2_5_3/precomputed/JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_3f5ec6016bc2242769c41befdbc1b2e0",
"transform": [
[
1,
diff --git a/src/res/ext/freesurfer.json b/src/res/ext/freesurfer.json
index eb51b4439..375f31574 100644
--- a/src/res/ext/freesurfer.json
+++ b/src/res/ext/freesurfer.json
@@ -5,17 +5,17 @@
"useTheme": "dark",
"three-surfer": {
"@context": {
- "rootUrl": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305",
+ "rootUrl": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305",
"fsa_fsa": "/fsaverage/fsaverage",
"fsa_fsa6": "/fsaverage/fsaverage6",
- "label_fsa_lh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.allSub_RF_ANTs_MNI152_orig_to_fsaverage.gii",
- "label_fsa_rh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.allSub_RF_ANTs_MNI152_orig_to_fsaverage.gii",
- "label_fsa6_lh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.BV_MNI152_orig_to_fsaverage6.gii",
- "label_fsa6_rh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.BV_MNI152_orig_to_fsaverage6.gii",
- "label_bv_hcp32k_lh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.allSub_RF_ANTs_MNI152_orig_to_hcp32k.gii",
- "label_bv_hcp32k_rh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.allSub_RF_ANTs_MNI152_orig_to_hcp32k.gii",
- "label_ants_hcp32k_lh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.BV_MNI152_orig_to_hcp32k.gii",
- "label_ants_hcp32k_rh": "https://neuroglancer-dev.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.BV_MNI152_orig_to_hcp32k.gii"
+ "label_fsa_lh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.allSub_RF_ANTs_MNI152_orig_to_fsaverage.gii",
+ "label_fsa_rh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.allSub_RF_ANTs_MNI152_orig_to_fsaverage.gii",
+ "label_fsa6_lh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.BV_MNI152_orig_to_fsaverage6.gii",
+ "label_fsa6_rh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.BV_MNI152_orig_to_fsaverage6.gii",
+ "label_bv_hcp32k_lh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.allSub_RF_ANTs_MNI152_orig_to_hcp32k.gii",
+ "label_bv_hcp32k_rh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.allSub_RF_ANTs_MNI152_orig_to_hcp32k.gii",
+ "label_ants_hcp32k_lh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/lh.JulichBrain_MPMAtlas_l_N10_nlin2Stdicbm152asym2009c_publicDOI_83fb39b2811305777db0eb80a0fc8b53.BV_MNI152_orig_to_hcp32k.gii",
+ "label_ants_hcp32k_rh": "https://neuroglancer.humanbrainproject.eu/precomputed/freesurfer/20210305/julichbrain_labels/rh.JulichBrain_MPMAtlas_r_N10_nlin2Stdicbm152asym2009c_publicDOI_172e93a5bec140c111ac862268f0d046.BV_MNI152_orig_to_hcp32k.gii"
},
"modes": [
{
diff --git a/src/res/ext/swmAggregatedData.json.bak b/src/res/ext/swmAggregatedData.json.bak
deleted file mode 100644
index f533c04ff..000000000
--- a/src/res/ext/swmAggregatedData.json.bak
+++ /dev/null
@@ -1,2868 +0,0 @@
-[
- [
- {
- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_CAC-PrCu_0",
- "regionName": [
- {
- "regionName": "lh_CAC-PrCu_0",
- "relationship": "equals"
- }
- ],
- "files": [
- {
- "filename": "Probabilistic Map for lh_CAC-PrCu_0",
- "name": "Probabilistic Map for lh_CAC-PrCu_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CAC-PrCu_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CAC-PrCu_0.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
- ],
- [
- {
- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_CMF-Op_0",
- "regionName": [
- {
- "regionName": "lh_CMF-Op_0",
- "relationship": "equals"
- }
- ],
- "files": [
- {
- "filename": "Probabilistic Map for lh_CMF-Op_0",
- "name": "Probabilistic Map for lh_CMF-Op_0",
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- "properties": {
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- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-Op_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-Op_0.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
- ],
- [
- {
- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_CMF-PoC_0",
- "regionName": [
- {
- "regionName": "lh_CMF-PoC_0",
- "relationship": "equals"
- }
- ],
- "files": [
- {
- "filename": "Probabilistic Map for lh_CMF-PoC_0",
- "name": "Probabilistic Map for lh_CMF-PoC_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-PoC_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-PoC_0.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
- ],
- [
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- "name": "Probabilistic Map for lh_CMF-PrC_0",
- "regionName": [
- {
- "regionName": "lh_CMF-PrC_0",
- "relationship": "equals"
- }
- ],
- "files": [
- {
- "filename": "Probabilistic Map for lh_CMF-PrC_0",
- "name": "Probabilistic Map for lh_CMF-PrC_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-PrC_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-PrC_0.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- },
- {
- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_CMF-PrC_1",
- "regionName": [
- {
- "regionName": "lh_CMF-PrC_1",
- "relationship": "equals"
- }
- ],
- "files": [
- {
- "filename": "Probabilistic Map for lh_CMF-PrC_1",
- "name": "Probabilistic Map for lh_CMF-PrC_1",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-PrC_1",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-PrC_1.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
- ],
- [
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- "type": "Probabilistic Map",
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- "relationship": "equals"
- }
- ],
- "files": [
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- "filename": "Probabilistic Map for lh_CMF-RMF_0",
- "name": "Probabilistic Map for lh_CMF-RMF_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-RMF_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-RMF_0.nii"
- }
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- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
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- "name": "Probabilistic Map for lh_CMF-SF_0",
- "regionName": [
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- "relationship": "equals"
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- "files": [
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- "name": "Probabilistic Map for lh_CMF-SF_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_CMF-SF_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_CMF-SF_0.nii"
- }
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- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
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- [
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- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_Fu-LO_0",
- "regionName": [
- {
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- "relationship": "equals"
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- ],
- "files": [
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- "name": "Probabilistic Map for lh_Fu-LO_0",
- "mimetype": "application/nifti",
- "properties": {
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- "description": "",
- "publications": [],
- "associatedRegion": "lh_Fu-LO_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_Fu-LO_0.nii"
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- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
- ],
- [
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- "name": "Probabilistic Map for lh_IC-PrCu_0",
- "regionName": [
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- "relationship": "equals"
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- "description": "",
- "publications": [],
- "associatedRegion": "lh_IC-PrCu_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_IC-PrCu_0.nii"
- }
- ],
- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- }
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- [
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- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_IP-IT_0",
- "regionName": [
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- "relationship": "equals"
- }
- ],
- "files": [
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- "name": "Probabilistic Map for lh_IP-IT_0",
- "mimetype": "application/nifti",
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- "description": "",
- "publications": [],
- "associatedRegion": "lh_IP-IT_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_IP-IT_0.nii"
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- "relationship": "equals"
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- "files": [
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- "relationship": "equals"
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- "description": "",
- "publications": [],
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- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_IP-SM_0.nii"
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- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
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- [
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- "relationship": "equals"
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- ],
- "files": [
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- "name": "Probabilistic Map for lh_IP-SP_0",
- "mimetype": "application/nifti",
- "properties": {
- "name": null,
- "description": "",
- "publications": [],
- "associatedRegion": "lh_IP-SP_0",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
- "datasetInfo": "MNIColin27_PMap.json"
- },
- "url": "https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/SWM_atlas/left-hemisphere/Probability_Maps/lh_IP-SP_0.nii"
- }
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- "targetParcellation": "Fibre Bundle Atlas - Short Bundle"
- },
- {
- "type": "Probabilistic Map",
- "name": "Probabilistic Map for lh_IP-SP_1",
- "regionName": [
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- "relationship": "equals"
- }
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- "files": [
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- "name": "Probabilistic Map for lh_IP-SP_1",
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- "properties": {
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- "description": "",
- "publications": [],
- "associatedRegion": "lh_IP-SP_1",
- "associatedParcellation": "Fibre Bundle Atlas - Short Bundle",
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--
GitLab