From 74638fbfe7c4f4a873bbf9f602ec5f7d1571e2f0 Mon Sep 17 00:00:00 2001
From: Xiao Gui <xgui3783@gmail.com>
Date: Tue, 23 Oct 2018 11:52:18 +0200
Subject: [PATCH] bugfix: remove wireframe
---
src/res/ext/MNI152NehubaConfig.json | 2 +-
src/res/ext/allenMouseNehubaConfig.json | 2 +-
src/res/ext/bigbrainNehubaConfig.json | 2 +-
src/res/ext/colinNehubaConfig.json | 2 +-
src/res/ext/infantNehubaConfig.json | 130 +++++++++++++++++++-
src/res/ext/waxholmRatV2_0NehubaConfig.json | 2 +-
6 files changed, 134 insertions(+), 6 deletions(-)
diff --git a/src/res/ext/MNI152NehubaConfig.json b/src/res/ext/MNI152NehubaConfig.json
index fddf871de..2a0d559ef 100644
--- a/src/res/ext/MNI152NehubaConfig.json
+++ b/src/res/ext/MNI152NehubaConfig.json
@@ -1 +1 @@
-{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":false},"removePerspectiveSlicesBackground":{"mode":"<","color":[0.1,0.1,0.1,1.0]},"waitForMesh":false,"drawSubstrates":{"color":[0.5,0.5,1.0,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0.0,0.0,0.0,1.0],"initialNgState":{"layers":{"mni152":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/mni_icbm152_t1_tal_nlin_asym_09c_masked","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle long":{"type":"segmentation","source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/long-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle short":{"visible":false,"type":"segmentation","source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/short-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":450000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
+{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":false},"removePerspectiveSlicesBackground":{"mode":"<","color":[0.1,0.1,0.1,1]},"waitForMesh":false,"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{"mni152":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/mni_icbm152_t1_tal_nlin_asym_09c_masked","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle long":{"type":"segmentation","source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/long-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]},"fibre bundle short":{"visible":false,"type":"segmentation","source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Fiber_Bundle/short-bundles_maxprob","transform":[[1,0,0,-96500000],[0,1,0,-132500000],[0,0,1,-78500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":450000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
diff --git a/src/res/ext/allenMouseNehubaConfig.json b/src/res/ext/allenMouseNehubaConfig.json
index e390740a9..186836a02 100644
--- a/src/res/ext/allenMouseNehubaConfig.json
+++ b/src/res/ext/allenMouseNehubaConfig.json
@@ -1 +1 @@
-{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"enableMeshLoadingControl":true,"zoomAtViewCentre":true,"restrictUserNavigation":true,"dataset":{"imageBackground":[0.0,0.0,0.0,0.0],"initialNgState":{"layers":{"stpt":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/templates/v3/stpt","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]]},"nissl":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/templates/v3/nissl","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]],"visible":false},"atlas":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/parcellations/v3_reduced","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[25000,25000,25000],"voxelCoordinates":[5.0738067626953,-3.9425048828125,-2.8185577392578]}},"zoomFactor":38990.5839902911},"perspectiveOrientation":[0.2650355100631714,0.7529539465904236,-0.5376962423324585,-0.27147674560546875],"perspectiveZoom":159399.12281678425}},"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":400,"sliceViewportHeight":400,"sliceZoom":41075.159536383755,"sliceViewportSizeMultiplier":2},"removePerspectiveSlicesBackground":{"color":[0.01,0.01,0.01,0.01],"mode":"<="},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true},"drawSubstrates":{"color":[0.0,0.0,0.5,0.2]},"restrictZoomLevel":{"maxZoom":364235.1741652613,"minZoom":89881.68746896513}}}}
\ No newline at end of file
+{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"enableMeshLoadingControl":true,"zoomAtViewCentre":true,"restrictUserNavigation":true,"dataset":{"imageBackground":[0,0,0,0],"initialNgState":{"showDefaultAnnotations":false,"layers":{"stpt":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/templates/v3/stpt","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]]},"nissl":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/templates/v3/nissl","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]],"visible":false},"atlas":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/AMBA/parcellations/v3_reduced","transform":[[1,0,0,-5737500],[0,1,0,-6637500],[0,0,1,-4037500],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[25000,25000,25000],"voxelCoordinates":[5.0738067626953,-3.9425048828125,-2.8185577392578]}},"zoomFactor":38990.5839902911},"perspectiveOrientation":[0.2650355100631714,0.7529539465904236,-0.5376962423324585,-0.27147674560546875],"perspectiveZoom":159399.12281678425}},"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":400,"sliceViewportHeight":400,"sliceZoom":41075.159536383755,"sliceViewportSizeMultiplier":2},"removePerspectiveSlicesBackground":{"color":[0.01,0.01,0.01,0.01],"mode":"<="},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true},"drawSubstrates":{"color":[0,0,0.5,0.2]},"restrictZoomLevel":{"maxZoom":364235.1741652613,"minZoom":89881.68746896513}}}}
\ No newline at end of file
diff --git a/src/res/ext/bigbrainNehubaConfig.json b/src/res/ext/bigbrainNehubaConfig.json
index 787843261..bb88d61ad 100644
--- a/src/res/ext/bigbrainNehubaConfig.json
+++ b/src/res/ext/bigbrainNehubaConfig.json
@@ -1 +1 @@
-{"configName":"BigBrain","globals":{"hideNullImageValues":true,"useNehubaLayout":{"keepDefaultLayouts":false},"useNehubaMeshLayer":true,"rightClickWithCtrlGlobal":false,"zoomWithoutCtrlGlobal":false,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"enableMeshLoadingControl":true,"zoomAtViewCentre":true,"restrictUserNavigation":true,"disableSegmentSelection":true,"dataset":{"imageBackground":[1,1,1,1],"initialNgState":{"layers":{" grey value: ":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/BigBrainRelease.2015/8bit","transform":[[1,0,0,-70677184],[0,1,0,-70010000],[0,0,1,-58788284],[0,0,0,1]]}," tissue type: ":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/BigBrainRelease.2015/classif","segments":["0"],"selectedAlpha":0,"notSelectedAlpha":0,"transform":[[1,0,0,-70666600],[0,1,0,-72910000],[0,0,1,-58777700],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[21166.666015625,20000,21166.666015625],"voxelCoordinates":[-21.8844051361084,16.288618087768555,28.418994903564453]}},"zoomFactor":350000},"perspectiveOrientation":[0.3140767216682434,-0.7418519854545593,0.4988985061645508,-0.3195493221282959],"perspectiveZoom":1922235.5293810747}},"layout":{"views":"hbp-neuro","planarSlicesBackground":[1,1,1,1],"useNehubaPerspective":{"enableShiftDrag":false,"doNotRestrictUserNavigation":false,"perspectiveSlicesBackground":[1,1,1,1],"removePerspectiveSlicesBackground":{"color":[1,1,1,1],"mode":"=="},"perspectiveBackground":[1,1,1,1],"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":563818.3562426177,"sliceViewportSizeMultiplier":2},"mesh":{"backFaceColor":[1,1,1,1],"removeBasedOnNavigation":true,"flipRemovedOctant":true},"centerToOrigin":true,"drawSubstrates":{"color":[0,0,0.5,0.15]},"drawZoomLevels":{"cutOff":200000,"color":[0.5,0,0,0.15]},"hideImages":false,"waitForMesh":true,"restrictZoomLevel":{"minZoom":1200000,"maxZoom":3500000}}}}
\ No newline at end of file
+{"configName":"BigBrain","globals":{"hideNullImageValues":true,"useNehubaLayout":{"keepDefaultLayouts":false},"useNehubaMeshLayer":true,"rightClickWithCtrlGlobal":false,"zoomWithoutCtrlGlobal":false,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"enableMeshLoadingControl":true,"zoomAtViewCentre":true,"restrictUserNavigation":true,"disableSegmentSelection":true,"dataset":{"imageBackground":[1,1,1,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{" grey value: ":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/BigBrainRelease.2015/8bit","transform":[[1,0,0,-70677184],[0,1,0,-70010000],[0,0,1,-58788284],[0,0,0,1]]}," tissue type: ":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/BigBrainRelease.2015/classif","segments":["0"],"selectedAlpha":0,"notSelectedAlpha":0,"transform":[[1,0,0,-70666600],[0,1,0,-72910000],[0,0,1,-58777700],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[21166.666015625,20000,21166.666015625],"voxelCoordinates":[-21.8844051361084,16.288618087768555,28.418994903564453]}},"zoomFactor":350000},"perspectiveOrientation":[0.3140767216682434,-0.7418519854545593,0.4988985061645508,-0.3195493221282959],"perspectiveZoom":1922235.5293810747}},"layout":{"views":"hbp-neuro","planarSlicesBackground":[1,1,1,1],"useNehubaPerspective":{"enableShiftDrag":false,"doNotRestrictUserNavigation":false,"perspectiveSlicesBackground":[1,1,1,1],"removePerspectiveSlicesBackground":{"color":[1,1,1,1],"mode":"=="},"perspectiveBackground":[1,1,1,1],"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":563818.3562426177,"sliceViewportSizeMultiplier":2},"mesh":{"backFaceColor":[1,1,1,1],"removeBasedOnNavigation":true,"flipRemovedOctant":true},"centerToOrigin":true,"drawSubstrates":{"color":[0,0,0.5,0.15]},"drawZoomLevels":{"cutOff":200000,"color":[0.5,0,0,0.15]},"hideImages":false,"waitForMesh":true,"restrictZoomLevel":{"minZoom":1200000,"maxZoom":3500000}}}}
\ No newline at end of file
diff --git a/src/res/ext/colinNehubaConfig.json b/src/res/ext/colinNehubaConfig.json
index dc548e4d0..e1596ffb4 100644
--- a/src/res/ext/colinNehubaConfig.json
+++ b/src/res/ext/colinNehubaConfig.json
@@ -1 +1 @@
-{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":true},"removePerspectiveSlicesBackground":{"mode":"=="},"waitForMesh":true,"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"layers":{"colin":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/colin27_seg","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]},"atlas":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/MPM","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":1000000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
+{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"enableMeshLoadingControl":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":300,"sliceViewportHeight":300,"sliceZoom":724698.1843689409,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true,"surfaceParcellation":true},"removePerspectiveSlicesBackground":{"mode":"=="},"waitForMesh":true,"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":150000},"restrictZoomLevel":{"minZoom":2500000,"maxZoom":3500000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{"colin":{"type":"image","visible":true,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/colin27_seg","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]},"atlas":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/JuBrain/v2.2c/MPM","transform":[[1,0,0,-75500000],[0,1,0,-111500000],[0,0,1,-67500000],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1000000,1000000,1000000],"voxelCoordinates":[0,-32,0]}},"zoomFactor":1000000},"perspectiveOrientation":[-0.2753947079181671,0.6631333827972412,-0.6360703706741333,0.2825356423854828],"perspectiveZoom":3000000}}}
\ No newline at end of file
diff --git a/src/res/ext/infantNehubaConfig.json b/src/res/ext/infantNehubaConfig.json
index 74539f0b3..0ceddac6a 100644
--- a/src/res/ext/infantNehubaConfig.json
+++ b/src/res/ext/infantNehubaConfig.json
@@ -1 +1,129 @@
-{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useCustomSegmentColors":true,"useNehubaMeshLayer":true},"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"rotateAtViewCentre":true,"zoomAtViewCentre":true,"restrictUserNavigation":true,"enableMeshLoadingControl":true,"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"layers":{"infant template":{"type":"image","source":"precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Infant/t2_masked_uint8","transform":[[1.0,0.0,0.0,-62091243.743896484],[0.0,1.0,0.0,-75278762.81738281],[0.0,0.0,1.0,-63800006.86645508],[0.0,0.0,0.0,1.0]]},"infant atlas":{"type":"segmentation","source":"precomputed://https://www.jubrain.fz-juelich.de/apps/hbp/preview/infant2/data/dummyseg","transform":[[-1,0,0,62699913.0249023],[0,-1,0,75827774.0478516],[0,0,-1,64288764.9536133],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[1098960.875,1098953.25,1099998.5],"voxelCoordinates":[-0.5184690952301025,3.893488645553589,1.6981953382492065]}},"zoomFactor":450227.18138248235},"perspectiveOrientation":[0.5,0.5,-0.5,-0.5],"perspectiveZoom":1895248.9337559766}},"layout":{"useNehubaPerspective":{"removePerspectiveSlicesBackground":{"mode":"=="},"fixedZoomPerspectiveSlices":{"sliceViewportWidth":400,"sliceViewportHeight":400,"sliceZoom":450227.18138248235,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"surfaceParcellation":true}}}}
\ No newline at end of file
+{
+ "globals": {
+ "hideNullImageValues": true,
+ "useNehubaLayout": true,
+ "useCustomSegmentColors": true,
+ "useNehubaMeshLayer": true
+ },
+ "zoomWithoutCtrl": true,
+ "hideNeuroglancerUI": true,
+ "rightClickWithCtrl": true,
+ "rotateAtViewCentre": true,
+ "zoomAtViewCentre": true,
+ "restrictUserNavigation": true,
+ "enableMeshLoadingControl": true,
+ "dataset": {
+ "imageBackground": [
+ 0,
+ 0,
+ 0,
+ 1
+ ],
+ "initialNgState": {
+ "showDefaultAnnotations":false,
+ "layers": {
+ "infant template": {
+ "type": "image",
+ "source": "precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/Infant/t2_masked_uint8",
+ "transform": [
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+ "infant atlas": {
+ "type": "segmentation",
+ "source": "precomputed://https://www.jubrain.fz-juelich.de/apps/hbp/preview/infant2/data/dummyseg",
+ "transform": [
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+ "pose": {
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+ "voxelSize": [
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+ ],
+ "voxelCoordinates": [
+ -0.5184690952301025,
+ 3.893488645553589,
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+ ]
+ }
+ },
+ "zoomFactor": 450227.18138248235
+ },
+ "perspectiveOrientation": [
+ 0.5,
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+ -0.5,
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+ ],
+ "perspectiveZoom": 1895248.9337559766
+ }
+ },
+ "layout": {
+ "useNehubaPerspective": {
+ "removePerspectiveSlicesBackground": {
+ "mode": "=="
+ },
+ "fixedZoomPerspectiveSlices": {
+ "sliceViewportWidth": 400,
+ "sliceViewportHeight": 400,
+ "sliceZoom": 450227.18138248235,
+ "sliceViewportSizeMultiplier": 2
+ },
+ "centerToOrigin": true,
+ "mesh": {
+ "surfaceParcellation": true
+ }
+ }
+ }
+}
\ No newline at end of file
diff --git a/src/res/ext/waxholmRatV2_0NehubaConfig.json b/src/res/ext/waxholmRatV2_0NehubaConfig.json
index 5e528f08b..1872f9229 100644
--- a/src/res/ext/waxholmRatV2_0NehubaConfig.json
+++ b/src/res/ext/waxholmRatV2_0NehubaConfig.json
@@ -1 +1 @@
-{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"rotateAtViewCentre":true,"zoomAtViewCentre":true,"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"enableMeshLoadingControl":true,"disableFixedPointObliqueRotation":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":1000,"sliceViewportHeight":1000,"sliceZoom":51263,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true},"removePerspectiveSlicesBackground":{"mode":"=="},"drawSubstrates":{"color":[0.5,0.5,1.0,0.2]},"drawZoomLevels":{"cutOff":15000}}},"dataset":{"imageBackground":[0.0,0.0,0.0,1.0],"initialNgState":{"layers":{"template":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/templates/v1.01/t2star_masked","transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]},"templateUnMasked":{"type":"image","visible":false,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/templates/v1.01/t2star","transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]},"whole":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/parcellations/v2","selectedAlpha":0.35,"transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[39062.5,39062.5,39062.5],"voxelCoordinates":[-1.5317133665084839,-146.45941162109375,20.52083969116211]}},"zoomFactor":59702.66654390316},"perspectiveOrientation":[-0.6278747916221619,-0.43671634793281555,0.4761661887168884,0.4339560568332672],"perspectiveZoom":379767.21993194974}}}
\ No newline at end of file
+{"globals":{"hideNullImageValues":true,"useNehubaLayout":true,"useNehubaMeshLayer":true,"useCustomSegmentColors":true},"rotateAtViewCentre":true,"zoomAtViewCentre":true,"zoomWithoutCtrl":true,"hideNeuroglancerUI":true,"rightClickWithCtrl":true,"enableMeshLoadingControl":true,"disableFixedPointObliqueRotation":true,"layout":{"useNehubaPerspective":{"fixedZoomPerspectiveSlices":{"sliceViewportWidth":1000,"sliceViewportHeight":1000,"sliceZoom":51263,"sliceViewportSizeMultiplier":2},"centerToOrigin":true,"mesh":{"removeBasedOnNavigation":true,"flipRemovedOctant":true},"removePerspectiveSlicesBackground":{"mode":"=="},"drawSubstrates":{"color":[0.5,0.5,1,0.2]},"drawZoomLevels":{"cutOff":15000}}},"dataset":{"imageBackground":[0,0,0,1],"initialNgState":{"showDefaultAnnotations":false,"layers":{"template":{"type":"image","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/templates/v1.01/t2star_masked","transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]},"templateUnMasked":{"type":"image","visible":false,"source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/templates/v1.01/t2star","transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]},"whole":{"type":"segmentation","source":"precomputed://https://neuroglancer.humanbrainproject.org/precomputed/WHS_SD_rat/parcellations/v2","selectedAlpha":0.35,"transform":[[1,0,0,-9550781],[0,1,0,-24355468],[0,0,1,-9707031],[0,0,0,1]]}},"navigation":{"pose":{"position":{"voxelSize":[39062.5,39062.5,39062.5],"voxelCoordinates":[-1.5317133665084839,-146.45941162109375,20.52083969116211]}},"zoomFactor":59702.66654390316},"perspectiveOrientation":[-0.6278747916221619,-0.43671634793281555,0.4761661887168884,0.4339560568332672],"perspectiveZoom":379767.21993194974}}}
\ No newline at end of file
--
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