From 70893df230fceeba5c41275f2930508f51f10c6f Mon Sep 17 00:00:00 2001
From: Christian Schiffer <c.schiffer@fz-juelich.de>
Date: Tue, 29 Sep 2020 15:57:08 +0200
Subject: [PATCH] Changed config to include new areas hOc3v and hOc5
---
src/res/ext/bigbrain.json | 61 ++++++++++++++++++++---
src/res/ext/bigbrainNehubaConfig.json | 72 ++++++++++++++++++++++++++-
2 files changed, 125 insertions(+), 8 deletions(-)
diff --git a/src/res/ext/bigbrain.json b/src/res/ext/bigbrain.json
index b49c34f64..69e7b6457 100644
--- a/src/res/ext/bigbrain.json
+++ b/src/res/ext/bigbrain.json
@@ -617,6 +617,27 @@
},
"relatedAreas": []
},
+ {
+ "name": "Area hOc3v (LingG)",
+ "ngId": "v3v",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [
+ ],
+ "rgb": [
+ 83,
+ 179,
+ 155
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "04674a3c-bb3a-495e-a466-206355e630bd"
+ }
+ },
+ "relatedAreas": []
+ },
{
"name": "dorsal occipital cortex",
"children": [
@@ -640,12 +661,38 @@
"relatedAreas": []
}
]
- }
- ]
- }
- ]
- }
- ]
+ },
+ {
+ "name": "lateral occipital cortex",
+ "children": [
+ {
+ "name": "Area hOc5 (LOC)",
+ "ngId": "v5",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [
+ ],
+ "rgb": [
+ 255,
+ 0,
+ 0
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "04674a3c-bb3a-495e-a466-206355e630bd"
+ }
+ },
+ "relatedAreas": []
+ }
+ ]
+ }
+ ]
+ }
+ ]
+ }
+ ]
}
]
}
@@ -784,4 +831,4 @@
}
]
}
-}
\ No newline at end of file
+}
diff --git a/src/res/ext/bigbrainNehubaConfig.json b/src/res/ext/bigbrainNehubaConfig.json
index 32046653e..21116787f 100644
--- a/src/res/ext/bigbrainNehubaConfig.json
+++ b/src/res/ext/bigbrainNehubaConfig.json
@@ -163,6 +163,76 @@
]
]
},
+ "v3v": {
+ "type": "segmentation",
+ "source": "precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/BigBrainRelease.2015/2020_09_29_v3v",
+ "segments": [
+ "0"
+ ],
+ "selectedAlpha": 0.45,
+ "notSelectedAlpha": 0,
+ "transform": [
+ [
+ 1,
+ 0,
+ 0,
+ -70677184
+ ],
+ [
+ 0,
+ 1,
+ 0,
+ -63610000
+ ],
+ [
+ 0,
+ 0,
+ 1,
+ -58788284
+ ],
+ [
+ 0,
+ 0,
+ 0,
+ 1
+ ]
+ ]
+ },
+ "v5": {
+ "type": "segmentation",
+ "source": "precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/BigBrainRelease.2015/2020_09_29_v5",
+ "segments": [
+ "0"
+ ],
+ "selectedAlpha": 0.45,
+ "notSelectedAlpha": 0,
+ "transform": [
+ [
+ 1,
+ 0,
+ 0,
+ -70677184
+ ],
+ [
+ 0,
+ 1,
+ 0,
+ -45690000
+ ],
+ [
+ 0,
+ 0,
+ 1,
+ -58788284
+ ],
+ [
+ 0,
+ 0,
+ 0,
+ 1
+ ]
+ ]
+ },
"interpolated": {
"type": "segmentation",
"source": "precomputed://https://neuroglancer-dev.humanbrainproject.org/precomputed/BigBrainRelease.2015/2019_05_22_interpolated_areas",
@@ -331,4 +401,4 @@
}
}
}
-}
\ No newline at end of file
+}
--
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