From 6aef777df2d8c4b2a96714bde11c20aa66fddcaf Mon Sep 17 00:00:00 2001
From: Christian Schiffer <c.schiffer@fz-juelich.de>
Date: Fri, 20 Nov 2020 14:12:01 +0100
Subject: [PATCH] Fixed hierarchy for LGB-lam 1-6 Added colors to LGB-lam 1-6
---
src/res/ext/bigbrain.json | 252 ++++++++++++++++++--------------------
1 file changed, 116 insertions(+), 136 deletions(-)
diff --git a/src/res/ext/bigbrain.json b/src/res/ext/bigbrain.json
index 2da9f60da..8181c78d7 100644
--- a/src/res/ext/bigbrain.json
+++ b/src/res/ext/bigbrain.json
@@ -694,164 +694,140 @@
}
]
},
+ {
+ "name": "diencephalon",
+ "children": [
+ {
+ "name": "cerebral nuclei",
+ "children": [
{
- "name": "diencephalon",
+ "name": "thalamus",
"children": [
{
- "name": "cerebral nuclei",
+ "name": "metathalamus",
"children": [
{
- "name": "thalamus",
+ "name": "lateral geniculate body",
"children": [
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam1 (CGL, Metathalamus)",
- "ngId": "LGB-lam1",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam1 (CGL, Metathalamus)",
+ "ngId": "LGB-lam1",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 157,
+ 34,
+ 194
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
},
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam2 (CGL, Metathalamus)",
- "ngId": "LGB-lam2",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam2 (CGL, Metathalamus)",
+ "ngId": "LGB-lam2",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 13,
+ 230,
+ 120
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
},
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam3 (CGL, Metathalamus)",
- "ngId": "LGB-lam3",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam3 (CGL, Metathalamus)",
+ "ngId": "LGB-lam3",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 191,
+ 134,
+ 194
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
},
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam4 (CGL, Metathalamus)",
- "ngId": "LGB-lam4",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam4 (CGL, Metathalamus)",
+ "ngId": "LGB-lam4",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 161,
+ 95,
+ 93
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
},
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam5 (CGL, Metathalamus)",
- "ngId": "LGB-lam5",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam5 (CGL, Metathalamus)",
+ "ngId": "LGB-lam5",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 231,
+ 31,
+ 98
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
},
{
- "name": "metathalamus",
- "children": [
- {
- "name": "lateral geniculate body",
- "children": [
- {
- "name": "LGB-lam6 (CGL, Metathalamus)",
- "ngId": "LGB-lam6",
- "status": "fully mapped",
- "labelIndex": 1,
- "position": [],
- "children": [],
- "fullId": {
- "kg": {
- "kgSchema": "minds/core/parcellationregion/v1.0.0",
- "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
- }
- },
- "relatedAreas": []
- }
- ]
+ "name": "LGB-lam6 (CGL, Metathalamus)",
+ "ngId": "LGB-lam6",
+ "status": "fully mapped",
+ "labelIndex": 1,
+ "position": [],
+ "rgb": [
+ 65,
+ 61,
+ 16
+ ],
+ "children": [],
+ "fullId": {
+ "kg": {
+ "kgSchema": "minds/core/parcellationregion/v1.0.0",
+ "kgId": "29335a69-4241-422a-a91c-117bc3bc8fa8"
}
- ]
+ },
+ "relatedAreas": []
}
]
}
@@ -859,6 +835,10 @@
}
]
}
+ ]
+ }
+ ]
+ }
]
},
{
@@ -994,4 +974,4 @@
}
]
}
-}
+}
\ No newline at end of file
--
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