diff --git a/src/res/ext/waxholmRatV2_0.json b/src/res/ext/waxholmRatV2_0.json index 391b51b8d0a779dc9de07336a257c1aaf5cdf460..cc097c40c9d3740571c84cc9ae88392175cd9759 100644 --- a/src/res/ext/waxholmRatV2_0.json +++ b/src/res/ext/waxholmRatV2_0.json @@ -3241,7 +3241,11 @@ { "name": "anterior commissure, anterior part", "labelIndex": 36, - "rgb": null, + "rgb": [ + 124, + 252, + 0 + ], "ngId": "v1_01", "_": { "abbreviation": "anterior commissure, anterior part", @@ -3328,7 +3332,11 @@ { "name": "ventral hippocampal commissure", "labelIndex": 38, - "rgb": null, + "rgb": [ + 174, + 0, + 232 + ], "ngId": "v1_01", "_": { "abbreviation": "ventral hippocampal commissure", @@ -3397,7 +3405,11 @@ { "name": "corticofugal pathways", "labelIndex": 1, - "rgb": null, + "rgb": [ + 255, + 52, + 39 + ], "ngId": "v1_01", "_": { "abbreviation": "corticofugal pathways", @@ -3411,7 +3423,11 @@ { "name": "pyramidal decussation", "labelIndex": 85, - "rgb": null, + "rgb": [ + 114, + 9, + 212 + ], "ngId": "v1_01", "_": { "abbreviation": "pyramidal decussation", @@ -3462,7 +3478,11 @@ { "name": "medial lemniscus decussation", "labelIndex": 84, - "rgb": null, + "rgb": [ + 65, + 150, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "medial lemniscus decussation", @@ -3567,7 +3587,11 @@ { "name": "stria terminalis", "labelIndex": 62, - "rgb": null, + "rgb": [ + 238, + 117, + 51 + ], "ngId": "v1_01", "_": { "abbreviation": "stria terminalis", @@ -3672,7 +3696,11 @@ { "name": "genu of the facial nerve", "labelIndex": 57, - "rgb": null, + "rgb": [ + 250, + 244, + 247 + ], "ngId": "v1_01", "_": { "abbreviation": "genu of the facial nerve", @@ -3723,7 +3751,11 @@ { "name": "optic tract and optic chiasm", "labelIndex": 42, - "rgb": null, + "rgb": [ + 38, + 126, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "optic tract and optic chiasm", @@ -3757,7 +3789,11 @@ { "name": "spinal trigeminal tract", "labelIndex": 76, - "rgb": null, + "rgb": [ + 250, + 128, + 114 + ], "ngId": "v1_01", "_": { "abbreviation": "spinal trigeminal tract", @@ -3824,7 +3860,11 @@ { "name": "commissure of the inferior colliculus", "labelIndex": 69, - "rgb": null, + "rgb": [ + 147, + 255, + 39 + ], "ngId": "v1_01", "_": { "abbreviation": "commissure of the inferior colliculus", @@ -3875,7 +3915,11 @@ { "name": "middle cerebellar peduncle", "labelIndex": 78, - "rgb": null, + "rgb": [ + 134, + 204, + 76 + ], "ngId": "v1_01", "_": { "abbreviation": "middle cerebellar peduncle", @@ -3889,7 +3933,11 @@ { "name": "transverse fibers of the pons", "labelIndex": 79, - "rgb": null, + "rgb": [ + 128, + 170, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "transverse fibers of the pons", @@ -3907,7 +3955,11 @@ { "name": "Gray matter", "labelIndex": 2, - "rgb": null, + "rgb": [ + 128, + 128, + 128 + ], "ngId": "v1_01", "_": { "abbreviation": "Gray matter", @@ -3920,7 +3972,11 @@ { "name": "Olfactory system", "labelIndex": null, - "rgb": null, + "rgb": [ + 128, + 128, + 128 + ], "ngId": "v1_01", "_": { "abbreviation": "Olfactory system", @@ -3969,7 +4025,11 @@ { "name": "olfactory bulb", "labelIndex": 66, - "rgb": null, + "rgb": [ + 255, + 135, + 0 + ], "ngId": "v1_01", "_": { "abbreviation": "olfactory bulb", @@ -3985,7 +4045,11 @@ { "name": "Cerebral cortex including the neocortex and the hippocampus", "labelIndex": null, - "rgb": null, + "rgb": [ + 128, + 128, + 128 + ], "ngId": "v1_01", "_": { "abbreviation": "Cerebral cortex including the neocortex and the hippocampus", @@ -3998,7 +4062,11 @@ { "name": "frontal association cortex", "labelIndex": 77, - "rgb": null, + "rgb": [ + 206, + 211, + 7 + ], "ngId": "v1_01", "_": { "abbreviation": "frontal association cortex", @@ -4012,7 +4080,11 @@ { "name": "hippocampal formation", "labelIndex": 86, - "rgb": null, + "rgb": [ + 14, + 71, + 226 + ], "ngId": "v1_01", "_": { "abbreviation": "hippocampal formation", @@ -4026,7 +4098,11 @@ { "name": "subiculum", "labelIndex": 87, - "rgb": null, + "rgb": [ + 221, + 217, + 81 + ], "ngId": "v1_01", "_": { "abbreviation": "subiculum", @@ -4040,7 +4116,11 @@ { "name": "postrhinal cortex", "labelIndex": 88, - "rgb": null, + "rgb": [ + 137, + 211, + 85 + ], "ngId": "v1_01", "_": { "abbreviation": "postrhinal cortex", @@ -4054,7 +4134,11 @@ { "name": "ventral-intermediate entorhinal area", "labelIndex": 89, - "rgb": null, + "rgb": [ + 139, + 0, + 139 + ], "ngId": "v1_01", "_": { "abbreviation": "ventral-intermediate entorhinal area", @@ -4068,7 +4152,11 @@ { "name": "medial entorhinal field", "labelIndex": 90, - "rgb": null, + "rgb": [ + 65, + 255, + 39 + ], "ngId": "v1_01", "_": { "abbreviation": "medial entorhinal field", @@ -4118,7 +4206,11 @@ { "name": "cingulate cortex, area 2", "labelIndex": 10, - "rgb": null, + "rgb": [ + 29, + 104, + 235 + ], "ngId": "v1_01", "_": { "abbreviation": "cingulate cortex, area 2", @@ -4132,7 +4224,11 @@ { "name": "dorsal-lateral entorhinal area", "labelIndex": 14, - "rgb": null, + "rgb": [ + 46, + 139, + 87 + ], "ngId": "v1_01", "_": { "abbreviation": "dorsal-lateral entorhinal area", @@ -4146,7 +4242,11 @@ { "name": "dorsal-intermediate entorhinal area", "labelIndex": 15, - "rgb": null, + "rgb": [ + 127, + 129, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "dorsal-intermediate entorhinal area", @@ -4160,7 +4260,11 @@ { "name": "perirhinal cortex", "labelIndex": 17, - "rgb": null, + "rgb": [ + 221, + 100, + 121 + ], "ngId": "v1_01", "_": { "abbreviation": "perirhinal cortex", @@ -4176,7 +4280,11 @@ { "name": "striatum", "labelIndex": 30, - "rgb": null, + "rgb": [ + 129, + 79, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "striatum", @@ -4190,7 +4298,11 @@ { "name": "globus pallidus", "labelIndex": 31, - "rgb": null, + "rgb": [ + 255, + 145, + 186 + ], "ngId": "v1_01", "_": { "abbreviation": "globus pallidus", @@ -4204,7 +4316,11 @@ { "name": "entopeduncular nucleus", "labelIndex": 32, - "rgb": null, + "rgb": [ + 26, + 231, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "entopeduncular nucleus", @@ -4254,7 +4370,11 @@ { "name": "septal region", "labelIndex": 40, - "rgb": null, + "rgb": [ + 255, + 8, + 0 + ], "ngId": "v1_01", "_": { "abbreviation": "septal region", @@ -4286,7 +4406,11 @@ { "name": "bed nucleus of the stria terminalis", "labelIndex": 93, - "rgb": null, + "rgb": [ + 0, + 8, + 182 + ], "ngId": "v1_01", "_": { "abbreviation": "bed nucleus of the stria terminalis", @@ -4300,7 +4424,11 @@ { "name": "nucleus of the stria medullaris", "labelIndex": 81, - "rgb": null, + "rgb": [ + 222, + 7, + 237 + ], "ngId": "v1_01", "_": { "abbreviation": "nucleus of the stria medullaris", @@ -4314,7 +4442,11 @@ { "name": "hypothalamic region", "labelIndex": 48, - "rgb": null, + "rgb": [ + 226, + 120, + 161 + ], "ngId": "v1_01", "_": { "abbreviation": "hypothalamic region", @@ -4346,7 +4478,11 @@ { "name": "Tectum", "labelIndex": null, - "rgb": null, + "rgb": [ + 128, + 128, + 128 + ], "ngId": "v1_01", "_": { "abbreviation": "Tectum", @@ -4377,7 +4513,11 @@ { "name": "pretectal region", "labelIndex": 94, - "rgb": null, + "rgb": [ + 255, + 87, + 30 + ], "ngId": "v1_01", "_": { "abbreviation": "pretectal region", @@ -4409,7 +4549,11 @@ { "name": "deeper layers of the superior colliculus", "labelIndex": 55, - "rgb": null, + "rgb": [ + 225, + 151, + 15 + ], "ngId": "v1_01", "_": { "abbreviation": "deeper layers of the superior colliculus", @@ -4461,7 +4605,11 @@ { "name": "periaqueductal gray", "labelIndex": 51, - "rgb": null, + "rgb": [ + 7, + 255, + 89 + ], "ngId": "v1_01", "_": { "abbreviation": "periaqueductal gray", @@ -4475,7 +4623,11 @@ { "name": "pontine nuclei", "labelIndex": 58, - "rgb": null, + "rgb": [ + 0, + 215, + 11 + ], "ngId": "v1_01", "_": { "abbreviation": "pontine nuclei", @@ -4489,7 +4641,11 @@ { "name": "Cerebellum", "labelIndex": null, - "rgb": null, + "rgb": [ + 128, + 128, + 128 + ], "ngId": "v1_01", "_": { "abbreviation": "Cerebellum", @@ -4576,7 +4732,11 @@ { "name": "periventricular gray", "labelIndex": 56, - "rgb": null, + "rgb": [ + 235, + 87, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "periventricular gray", @@ -4590,7 +4750,11 @@ { "name": "brain stem", "labelIndex": 47, - "rgb": null, + "rgb": [ + 153, + 83, + 255 + ], "ngId": "v1_01", "_": { "abbreviation": "brain stem", @@ -4624,7 +4788,11 @@ { "name": "Spinal cord", "labelIndex": null, - "rgb": null, + "rgb": [ + 134, + 255, + 90 + ], "ngId": "v1_01", "_": { "abbreviation": "Spinal cord", @@ -4637,7 +4805,11 @@ { "name": "spinal cord", "labelIndex": 45, - "rgb": null, + "rgb": [ + 134, + 255, + 90 + ], "ngId": "v1_01", "_": { "abbreviation": "spinal cord", @@ -4651,7 +4823,11 @@ { "name": "central canal", "labelIndex": 70, - "rgb": null, + "rgb": [ + 39, + 244, + 253 + ], "ngId": "v1_01", "_": { "abbreviation": "central canal",