diff --git a/base/Dockerfile b/base/Dockerfile index 80d0c36d8d518ad3ef2067435afae7eeab0bc2fd..1316d0e41dc4eacd1fe50e3d79f001ddb8bdb2af 100644 --- a/base/Dockerfile +++ b/base/Dockerfile @@ -95,6 +95,10 @@ RUN mkdir -p /opt/app-root/src/.ipython/profile_default/startup/ /opt/app-root/s # Preload clb_oauth RUN echo 'from clb_nb_utils import oauth as clb_oauth' >> /opt/app-root/src/.ipython/profile_default/startup/50-clb-nb-utils.py +# install R kernel +RUN R --slave -e "install.packages('IRkernel')" +RUN R --slave -e "IRkernel::installspec(name = 'ir363', displayname = 'R 3.6.3')" + # fix permissions so NB_USER has permissions to run notebooks and install packages COPY base/fix-permissions /usr/local/bin/fix-permissions RUN chmod +x /usr/local/bin/fix-permissions