From 81524c0bd6eb713cc3ac1452b8dc4db47b8cf0e9 Mon Sep 17 00:00:00 2001
From: Lungsi <lungsi.ngwua@cnrs.fr>
Date: Fri, 11 Feb 2022 13:37:39 +0100
Subject: [PATCH 1/3] spark package for CerebUnit
---
packages/py-cerebunit/package.py | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
create mode 100644 packages/py-cerebunit/package.py
diff --git a/packages/py-cerebunit/package.py b/packages/py-cerebunit/package.py
new file mode 100644
index 00000000..ead3586b
--- /dev/null
+++ b/packages/py-cerebunit/package.py
@@ -0,0 +1,31 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class PyCerebunit(PythonPackage):
+ """CerebUnit is a component for validating cerebellum models that contains the validation tests.
+ It is one of the four components for validating cerebellum models:
+ CerebModels and CerebData do not require installation while CerebUnit and CerebStats require installation."""
+
+ homepage = "https://cerebunit.readthedocs.io"
+ pypi = "cerebunit/cerebunit-0.0.1.tar.gz"
+ git = "https://github.com/cerebunit/cerebunit.git"
+
+ maintainers = ['lungsi', 'apdavison'] # github usernames
+
+ version('0.0.1', sha256='f5b3811c5da2e8416a30a67497b90c87cba176493662e73f2191f1375a6d7bfe')
+
+ depends_on('py-cerebstats', type=('build', 'run'))
+ depends_on('py-numpy', type=('build', 'run'))
+ depends_on('py-scipy', type=('build', 'run'))
+ depends_on('py-quantities', type='build', 'run')
+ depends_on('py-sciunit', type=('build', 'run'))
+ depends_on('py-pynwb', type=('build', 'run'), when="@1.0.2")
+ depends_on('py-hdmf', type=('build', 'run'), when="@1.0.3")
+ depends_on('py-h5py', type=('build', 'run'))
+ depends_on('py-pandas', type=('build', 'run'))
+
--
GitLab
From fda0d47fc71488c89fd2139f7939fb3fdefb68f4 Mon Sep 17 00:00:00 2001
From: Lungsi <lungsi.ngwua@cnrs.fr>
Date: Fri, 11 Feb 2022 13:38:48 +0100
Subject: [PATCH 2/3] spark package for CerebStats
---
packages/py-cerebstats/package.py | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
create mode 100644 packages/py-cerebstats/package.py
diff --git a/packages/py-cerebstats/package.py b/packages/py-cerebstats/package.py
new file mode 100644
index 00000000..c72ec487
--- /dev/null
+++ b/packages/py-cerebstats/package.py
@@ -0,0 +1,26 @@
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class PyCerebstats(PythonPackage):
+ """CerebStats is the statistical library for CerebUnit.
+ It is one of the four components for validating cerebellum models:
+ CerebModels and CerebData do not require installation while CerebUnit and CerebStats require installation."""
+
+ homepage = "https://cerebstats.readthedocs.io"
+ pypi = "cerebstats/cerebstats-0.0.3.tar.gz"
+ git = "https://github.com/cerebunit/cerebstats.git"
+
+ maintainers = ['lungsi', 'apdavison'] # github usernames
+
+ version('0.0.3', sha256='0270ac7d37706d067e5e72de80f6dbd23309ec02a71ad4443f0f457790a9aa8c')
+
+ depends_on('py-numpy', type=('build', 'run'))
+ depends_on('py-scipy', type=('build', 'run'))
+ depends_on('py-quantities', type='build', 'run')
+ depends_on('py-sciunit', type=('build', 'run'))
+
--
GitLab
From 1403907cfc36f83ce0e4419449f842d094ed5c52 Mon Sep 17 00:00:00 2001
From: Lungsi <lungsi.ngwua@cnrs.fr>
Date: Sat, 12 Feb 2022 11:33:46 +0100
Subject: [PATCH 3/3] corrected vers. depend. error
---
packages/py-cerebunit/package.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/packages/py-cerebunit/package.py b/packages/py-cerebunit/package.py
index ead3586b..f0c9e649 100644
--- a/packages/py-cerebunit/package.py
+++ b/packages/py-cerebunit/package.py
@@ -24,8 +24,8 @@ class PyCerebunit(PythonPackage):
depends_on('py-scipy', type=('build', 'run'))
depends_on('py-quantities', type='build', 'run')
depends_on('py-sciunit', type=('build', 'run'))
- depends_on('py-pynwb', type=('build', 'run'), when="@1.0.2")
- depends_on('py-hdmf', type=('build', 'run'), when="@1.0.3")
+ depends_on('py-pynwb@1.0.2', type=('build', 'run'))
+ depends_on('py-hdmf@1.0.3', type=('build', 'run'))
depends_on('py-h5py', type=('build', 'run'))
depends_on('py-pandas', type=('build', 'run'))
--
GitLab