From 9c67428ff277f7965c9647edfb1342f9834eb1aa Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Eric=20M=C3=BCller?= <mueller@kip.uni-heidelberg.de> Date: Mon, 11 Oct 2021 10:00:31 +0200 Subject: [PATCH] Fix(pynn-brainscales): Enforce correct log4cxx version MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit The production env seems to use a newer spack repo state → log4cxx is newer than currently supported for BrainScaleS → quickfix: pin to old version. (cherry picked from commit fa396948e0534739fa466e2d195c4a067bb9daa1) --- .../log4cxx/log4cxx-0.10.0-llvm-libcxx.patch | 26 ++++ .../log4cxx-0.10.0-missing_includes.patch | 38 ++++++ ...0.10.0-narrowing-fixes-from-upstream.patch | 117 ++++++++++++++++++ packages/log4cxx/package.py | 31 +++++ spack.yaml | 2 +- 5 files changed, 213 insertions(+), 1 deletion(-) create mode 100644 packages/log4cxx/log4cxx-0.10.0-llvm-libcxx.patch create mode 100644 packages/log4cxx/log4cxx-0.10.0-missing_includes.patch create mode 100644 packages/log4cxx/log4cxx-0.10.0-narrowing-fixes-from-upstream.patch create mode 100644 packages/log4cxx/package.py diff --git a/packages/log4cxx/log4cxx-0.10.0-llvm-libcxx.patch b/packages/log4cxx/log4cxx-0.10.0-llvm-libcxx.patch new file mode 100644 index 00000000..addd1983 --- /dev/null +++ b/packages/log4cxx/log4cxx-0.10.0-llvm-libcxx.patch @@ -0,0 +1,26 @@ +--- apache-log4cxx-0.10.0/src/main/cpp/stringhelper.cpp2018-04-19 09:48:50.762552 436 +0200 ++++ apache-log4cxx-0.10.0-old/src/main/cpp/stringhelper.cpp2 008-04-01 00:34:09.000000000 +0200 +@@ -28,7 +28,6 @@ + #endif + #include <log4cxx/private/log4cxx_private.h> + #include <cctype> +-#include <cstdlib> + #include <apr.h> + + +diff -rpu apache-log4cxx-0.10.0/src/main/include/log4cxx/helpers/simpledateformat.h apache-log4cxx-0.10.0-old/src/main/include/log4cxx/helpers/simpledateformat.h +--- apache-log4cxx-0.10.0/src/main/include/log4cxx/helpers/simpledateformat.h2018-04-19 09:4 8:19.010260662 +0200 ++++ apache-log4cxx-0.10.0-old/src/main/include/log4cxx/helpers/simpledateformat.h2008-04-01 00:34:26.000000000 +0200 +@@ -26,1 0 +26,11 @@ + + + #include <log4cxx/helpers/dateformat.h> +-#include <locale> + #include <vector> + #include <time.h> + ++namespace std { class locale; } ++ + namespace log4cxx + { + namespace helpers diff --git a/packages/log4cxx/log4cxx-0.10.0-missing_includes.patch b/packages/log4cxx/log4cxx-0.10.0-missing_includes.patch new file mode 100644 index 00000000..6834648d --- /dev/null +++ b/packages/log4cxx/log4cxx-0.10.0-missing_includes.patch @@ -0,0 +1,38 @@ +diff -Naur apache-log4cxx-0.10.0.orig/src/examples/cpp/console.cpp apache-log4cxx-0.10.0/src/examples/cpp/console.cpp +--- apache-log4cxx-0.10.0.orig/src/examples/cpp/console.cpp 2008-04-01 00:34:52.000000000 +0200 ++++ apache-log4cxx-0.10.0/src/examples/cpp/console.cpp 2008-05-06 05:40:52.000000000 +0200 +@@ -15,7 +15,10 @@ + * limitations under the License. + */ + +-#include <stdlib.h> ++#include <cstdio> ++#include <cstdlib> ++#include <cstring> ++#include <stdint.h> + #include <log4cxx/logger.h> + #include <log4cxx/consoleappender.h> + #include <log4cxx/simplelayout.h> +diff -Naur apache-log4cxx-0.10.0.orig/src/main/cpp/inputstreamreader.cpp apache-log4cxx-0.10.0/src/main/cpp/inputstreamreader.cpp +--- apache-log4cxx-0.10.0.orig/src/main/cpp/inputstreamreader.cpp 2008-04-01 00:34:09.000000000 +0200 ++++ apache-log4cxx-0.10.0/src/main/cpp/inputstreamreader.cpp 2008-05-06 05:32:31.000000000 +0200 +@@ -21,6 +21,8 @@ + #include <log4cxx/helpers/pool.h> + #include <log4cxx/helpers/bytebuffer.h> + ++#include <cstring> ++ + using namespace log4cxx; + using namespace log4cxx::helpers; + +diff -Naur apache-log4cxx-0.10.0.orig/src/main/cpp/socketoutputstream.cpp apache-log4cxx-0.10.0/src/main/cpp/socketoutputstream.cpp +--- apache-log4cxx-0.10.0.orig/src/main/cpp/socketoutputstream.cpp 2008-04-01 00:34:09.000000000 +0200 ++++ apache-log4cxx-0.10.0/src/main/cpp/socketoutputstream.cpp 2008-05-06 05:35:55.000000000 +0200 +@@ -20,6 +20,8 @@ + #include <log4cxx/helpers/socket.h> + #include <log4cxx/helpers/bytebuffer.h> + ++#include <cstring> ++ + using namespace log4cxx; + using namespace log4cxx::helpers; \ No newline at end of file diff --git a/packages/log4cxx/log4cxx-0.10.0-narrowing-fixes-from-upstream.patch b/packages/log4cxx/log4cxx-0.10.0-narrowing-fixes-from-upstream.patch new file mode 100644 index 00000000..e583e766 --- /dev/null +++ b/packages/log4cxx/log4cxx-0.10.0-narrowing-fixes-from-upstream.patch @@ -0,0 +1,117 @@ +diff --git a/src/main/cpp/locationinfo.cpp b/src/main/cpp/locationinfo.cpp +index e76ea29..bd22a1d 100644 +--- a/src/main/cpp/locationinfo.cpp ++++ b/src/main/cpp/locationinfo.cpp +@@ -149,18 +149,21 @@ void LocationInfo::write(ObjectOutputStream& os, Pool& p) const { + os.writeNull(p); + } else { + char prolog[] = { +- 0x72, 0x00, 0x21, 0x6F, 0x72, 0x67, 0x2E, +- 0x61, 0x70, 0x61, 0x63, 0x68, 0x65, 0x2E, 0x6C, +- 0x6F, 0x67, 0x34, 0x6A, 0x2E, 0x73, 0x70, 0x69, +- 0x2E, 0x4C, 0x6F, 0x63, 0x61, 0x74, 0x69, 0x6F, +- 0x6E, 0x49, 0x6E, 0x66, 0x6F, 0xED, 0x99, 0xBB, +- 0xE1, 0x4A, 0x91, 0xA5, 0x7C, 0x02, 0x00, 0x01, +- 0x4C, 0x00, 0x08, 0x66, 0x75, 0x6C, 0x6C, 0x49, +- 0x6E, 0x66, 0x6F, +- 0x74, 0x00, 0x12, 0x4C, 0x6A, +- 0x61, 0x76, 0x61, 0x2F, 0x6C, 0x61, 0x6E, 0x67, +- 0x2F, 0x53, 0x74, 0x72, 0x69, 0x6E, 0x67, 0x3B, +- 0x78, 0x70 }; ++ 0x72, ++ 0x00, ++ 0x21, 0x6F, 0x72, 0x67, 0x2E, 0x61, 0x70, 0x61, 0x63, 0x68, 0x65, 0x2E, ++ 0x6C, 0x6F, 0x67, 0x34, 0x6A, 0x2E, 0x73, 0x70, 0x69, 0x2E, 0x4C, 0x6F, ++ 0x63, 0x61, 0x74, 0x69, 0x6F, 0x6E, 0x49, 0x6E, 0x66, 0x6F, static_cast<char>(0xED), ++ static_cast<char>(0x99), static_cast<char>(0xBB), static_cast<char>(0xE1), ++ 0x4A, static_cast<char>(0x91), static_cast<char>(0xA5), 0x7C, 0x02, ++ 0x00, ++ 0x01, 0x4C, ++ 0x00, ++ 0x08, 0x66, 0x75, 0x6C, 0x6C, 0x49, 0x6E, 0x66, 0x6F, 0x74, ++ 0x00, ++ 0x12, 0x4C, 0x6A, 0x61, 0x76, 0x61, 0x2F, 0x6C, 0x61, 0x6E, 0x67, 0x2F, ++ 0x53, 0x74, 0x72, 0x69, 0x6E, 0x67, 0x3B, 0x78, 0x70 ++ }; + os.writeProlog("org.apache.log4j.spi.LocationInfo", 2, prolog, sizeof(prolog), p); + char* line = p.itoa(lineNumber); + // +diff --git a/src/main/cpp/loggingevent.cpp b/src/main/cpp/loggingevent.cpp +index 1c0d4be..edbf40b 100644 +--- a/src/main/cpp/loggingevent.cpp ++++ b/src/main/cpp/loggingevent.cpp +@@ -242,7 +242,7 @@ void LoggingEvent::writeProlog(ObjectOutputStream& os, Pool& p) { + 0x68, 0x65, 0x2E, 0x6C, 0x6F, 0x67, 0x34, 0x6A, + 0x2E, 0x73, 0x70, 0x69, 0x2E, 0x4C, 0x6F, 0x67, + 0x67, 0x69, 0x6E, 0x67, 0x45, 0x76, 0x65, 0x6E, +- 0x74, 0xF3, 0xF2, 0xB9, 0x23, 0x74, 0x0B, 0xB5, ++ 0x74, static_cast<char>(0xF3), static_cast<char>(0xF2), static_cast<char>(0xB9), 0x23, 0x74, 0x0B, static_cast<char>(0xB5), + 0x3F, 0x03, 0x00, 0x0A, 0x5A, 0x00, 0x15, 0x6D, + 0x64, 0x63, 0x43, 0x6F, 0x70, 0x79, 0x4C, 0x6F, + 0x6F, 0x6B, 0x75, 0x70, 0x52, 0x65, 0x71, 0x75, +diff --git a/src/main/cpp/objectoutputstream.cpp b/src/main/cpp/objectoutputstream.cpp +index 7cd696b..5442420 100644 +--- a/src/main/cpp/objectoutputstream.cpp ++++ b/src/main/cpp/objectoutputstream.cpp +@@ -36,7 +36,7 @@ ObjectOutputStream::ObjectOutputStream(OutputStreamPtr outputStream, Pool& p) + objectHandle(0x7E0000), + classDescriptions(new ClassDescriptionMap()) + { +- char start[] = { 0xAC, 0xED, 0x00, 0x05 }; ++ char start[] = { static_cast<char>(0xAC), static_cast<char>(0xED), 0x00, 0x05 }; + ByteBuffer buf(start, sizeof(start)); + os->write(buf, p); + } +@@ -81,15 +81,15 @@ void ObjectOutputStream::writeObject(const MDC::Map& val, Pool& p) { + // + // TC_OBJECT and the classDesc for java.util.Hashtable + // +- char prolog[] = { +- 0x72, 0x00, 0x13, 0x6A, 0x61, 0x76, 0x61, +- 0x2E, 0x75, 0x74, 0x69, 0x6C, 0x2E, 0x48, 0x61, +- 0x73, 0x68, 0x74, 0x61, 0x62, 0x6C, 0x65, 0x13, +- 0xBB, 0x0F, 0x25, 0x21, 0x4A, 0xE4, 0xB8, 0x03, +- 0x00, 0x02, 0x46, 0x00, 0x0A, 0x6C, 0x6F, 0x61, +- 0x64, 0x46, 0x61, 0x63, 0x74, 0x6F, 0x72, 0x49, +- 0x00, 0x09, 0x74, 0x68, 0x72, 0x65, 0x73, 0x68, +- 0x6F, 0x6C, 0x64, 0x78, 0x70 }; ++ char prolog[] = { ++ 0x72, 0x00, 0x13, 0x6A, 0x61, 0x76, 0x61, ++ 0x2E, 0x75, 0x74, 0x69, 0x6C, 0x2E, 0x48, 0x61, ++ 0x73, 0x68, 0x74, 0x61, 0x62, 0x6C, 0x65, 0x13, ++ static_cast<char>(0xBB), 0x0F, 0x25, 0x21, 0x4A, static_cast<char>(0xE4), static_cast<char>(0xB8), 0x03, ++ 0x00, 0x02, 0x46, 0x00, 0x0A, 0x6C, 0x6F, 0x61, ++ 0x64, 0x46, 0x61, 0x63, 0x74, 0x6F, 0x72, 0x49, ++ 0x00, 0x09, 0x74, 0x68, 0x72, 0x65, 0x73, 0x68, ++ 0x6F, 0x6C, 0x64, 0x78, 0x70 }; + writeProlog("java.util.Hashtable", 1, prolog, sizeof(prolog), p); + // + // loadFactor = 0.75, threshold = 5, blockdata start, buckets.size = 7 +diff --git a/src/test/cpp/xml/domtestcase.cpp b/src/test/cpp/xml/domtestcase.cpp +index a500628..29d67dd 100644 +--- a/src/test/cpp/xml/domtestcase.cpp ++++ b/src/test/cpp/xml/domtestcase.cpp +@@ -190,9 +190,9 @@ public: + DOMConfigurator::configure(LOG4CXX_TEST_STR("input/xml/DOMTestCase3.xml")); + LOG4CXX_INFO(logger, "File name is expected to end with a superscript 3"); + #if LOG4CXX_LOGCHAR_IS_UTF8 +- const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, 0xC2, 0xB3, 0 }; ++ const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, static_cast<logchar>(0xC2), static_cast<logchar>(0xB3), 0 }; + #else +- const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, 0xB3, 0 }; ++ const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, static_cast<logchar>(0xB3), 0 }; + #endif + File file; + file.setPath(fname); +@@ -209,9 +209,9 @@ public: + DOMConfigurator::configure(LOG4CXX_TEST_STR("input/xml/DOMTestCase4.xml")); + LOG4CXX_INFO(logger, "File name is expected to end with an ideographic 4"); + #if LOG4CXX_LOGCHAR_IS_UTF8 +- const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, 0xE3, 0x86, 0x95, 0 }; ++ const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, static_cast<logchar>(0xE3), static_cast<logchar>(0x86), static_cast<logchar>(0x95), 0 }; + #else +- const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, 0x3195, 0 }; ++ const logchar fname[] = { 0x6F, 0x75, 0x74, 0x70, 0x75, 0x74, 0x2F, 0x64, 0x6F, 0x6D, static_cast<logchar>(0x3195), 0 }; + #endif + File file; + file.setPath(fname); \ No newline at end of file diff --git a/packages/log4cxx/package.py b/packages/log4cxx/package.py new file mode 100644 index 00000000..96ef6c61 --- /dev/null +++ b/packages/log4cxx/package.py @@ -0,0 +1,31 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Log4cxx(AutotoolsPackage): + """A C++ port of Log4j""" + + homepage = "https://logging.apache.org/log4cxx/latest_stable/" + url = "http://mirror.netcologne.de/apache.org/logging/log4cxx/0.10.0/apache-log4cxx-0.10.0.tar.gz" + + version('0.10.0', sha256='0de0396220a9566a580166e66b39674cb40efd2176f52ad2c65486c99c920c8c') + + depends_on('apr-util') + depends_on('apr') + depends_on('zip') + + build_directory = 'spack-build' + + # patches from https://aur.archlinux.org/packages/log4cxx/ + patch('log4cxx-0.10.0-missing_includes.patch') + patch('log4cxx-0.10.0-narrowing-fixes-from-upstream.patch') + patch('log4cxx-0.10.0-llvm-libcxx.patch', when='@0.10.0%clang') + + def configure_args(self): + args = ['--disable-static'] + + return args diff --git a/spack.yaml b/spack.yaml index 96c97350..451e6a54 100644 --- a/spack.yaml +++ b/spack.yaml @@ -26,4 +26,4 @@ spack: - py-formencode %gcc@10.3.0 - tvb-framework ^binutils+ld+gold %gcc@10.3.0 - meta-brainscales %gcc@10.3.0 - - pynn-brainscales@1.0-rc2 ^googletest@1.11.0:+gmock %gcc@10.3.0 + - pynn-brainscales@1.0-rc2 ^log4cxx@0.10.0 ^googletest@1.11.0:+gmock %gcc@10.3.0 -- GitLab