From cd52c42a43a9fb0cbd73fe3bb1cb0f1f5f791fe3 Mon Sep 17 00:00:00 2001 From: Eleni Mathioulaki <emathioulaki@athenarc.gr> Date: Tue, 4 Jul 2023 17:22:46 +0200 Subject: [PATCH] move non-EBRAINS packages for biobb demos to wf package --- packages/wf-biobb/package.py | 19 +++++++++++++++++++ spack.yaml | 3 +-- 2 files changed, 20 insertions(+), 2 deletions(-) create mode 100644 packages/wf-biobb/package.py diff --git a/packages/wf-biobb/package.py b/packages/wf-biobb/package.py new file mode 100644 index 00000000..4f98f444 --- /dev/null +++ b/packages/wf-biobb/package.py @@ -0,0 +1,19 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + + +from spack import * + + +class WfBiobb(BundlePackage): + """Meta-package to collect all dependencies for the BioBB demos/tutorials.""" + + homepage="https://wiki.ebrains.eu/bin/view/Collabs/biobb" + + version("0.1") + + depends_on("py-plotly") + depends_on("nglview") + depends_on("simpletraj") diff --git a/spack.yaml b/spack.yaml index df3cad04..f61acf10 100644 --- a/spack.yaml +++ b/spack.yaml @@ -16,7 +16,6 @@ spack: - hxtorch@6.0-rc1 - nest@3.5 +sonata - neuron@8.2.2 +mpi - - nglview@3.0.4 - py-bluepyefe@2.2.18 - py-bluepymm@0.7.65 - py-bluepyopt@1.13.86 @@ -63,8 +62,8 @@ spack: - r-sbtabvfgen@0.1 - r-uqsa@2.2 - sda@7.3.3d - - simpletraj@0.3 # Workflows (meta-packages) + - wf-biobb - wf-uq-akar4@0.1 - wf-multi-area-model@0.1 #- py-cerebstats -- GitLab