From 96068b05f1e7850ee24a8dbef2aebc9c7bef676f Mon Sep 17 00:00:00 2001 From: Andrei Kramer-Miehe <andrei.kramer@scilifelab.se> Date: Mon, 20 Feb 2023 12:49:46 +0100 Subject: [PATCH] added package.py for the R package SBtabVFGEN --- packages/r-sbtabvfgen/package.py | 32 ++++++++++++++++++++++++++++++++ 1 file changed, 32 insertions(+) create mode 100644 packages/r-sbtabvfgen/package.py diff --git a/packages/r-sbtabvfgen/package.py b/packages/r-sbtabvfgen/package.py new file mode 100644 index 00000000..eaeb83e2 --- /dev/null +++ b/packages/r-sbtabvfgen/package.py @@ -0,0 +1,32 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +# ---------------------------------------------------------------------------- +# If you submit this package back to Spack as a pull request, +# please first remove this boilerplate and all FIXME comments. +# +# This is a template package file for Spack. We've put "FIXME" +# next to all the things you'll want to change. Once you've handled +# them, you can save this file and test your package like this: +# +# spack install r-sbtabvfgen +# +# You can edit this file again by typing: +# +# spack edit r-sbtabvfgen +# +# See the Spack documentation for more information on packaging. +# ---------------------------------------------------------------------------- + +from spack.package import * + + +class RSbtabvfgen(RPackage): + """This package converts SBtab files (with one table per tsv file) into three other formats: vfgen, sbml, Neuron's MOD. It also saves its findings in a free form, as text files. SBtab files typically contain a reaction network model (systems biology). The output is more useful for simulations.""" + + homepage = "https://github.com/icpm-kth/SBtabVFGEN" + url = "https://github.com/icpm-kth/SBtabVFGEN/archive/refs/tags/v0.1.tar.gz" + + version("0.1", sha256="499c51abee75ca5961a41608c9fb09ad523e12aae276f5f67bffa313244cff28") -- GitLab