diff --git a/create_JupyterLab_kernel.sh b/create_JupyterLab_kernel.sh index 0f02e1210d40d82862917e22282d3a544d0ec498..769995959b5fce421db1b8585dc3b7d2a939077f 100644 --- a/create_JupyterLab_kernel.sh +++ b/create_JupyterLab_kernel.sh @@ -37,7 +37,7 @@ cp $INSTALLATION_ROOT/spack/var/spack/environments/$EBRAINS_SPACK_ENV/load_env.s # and the location of python modules installed in the base docker Collab image cat <<EOF >> $KERNEL_PATH/bin/env.sh export PATH=\$PATH:/opt/app-root/src/.local/bin -export PYTHONPATH=\$PYTHONPATH:/opt/app-root/src/.local/lib/python3.8/site-packages:/usr/local/lib/python3.8/dist-packages +export PYTHONPATH=\$PYTHONPATH:/opt/conda/lib/python3.11/site-packages export R_LIBS_USER=/opt/app-root/src/.local/lib/R/site-library mkdir -p \$R_LIBS_USER export R_LIBS=\$R_LIBS_USER:\$R_LIBS