diff --git a/PyNutil/coordinate_extraction.py b/PyNutil/coordinate_extraction.py index 5df3143f50ea3c8bf9a377e265fe9820b8879ba6..db162acca958b3784cab93610952d73a38252a84 100644 --- a/PyNutil/coordinate_extraction.py +++ b/PyNutil/coordinate_extraction.py @@ -3,7 +3,7 @@ import pandas as pd from DeepSlice.coord_post_processing.spacing_and_indexing import number_sections import json from .read_and_write import load_visualign_json -from .counting_and_load import label_points +from .counting_and_load import label_points, flat_to_dataframe from .visualign_deformations import triangulate, transform_vec from glob import glob from tqdm import tqdm @@ -87,13 +87,14 @@ def transform_to_atlas_space(anchoring, y, x, reg_height, reg_width): def folder_to_atlas_space( folder, quint_alignment, + atlas_labels, pixel_id=[0, 0, 0], non_linear=True, method="all", object_cutoff=0, ): """Apply Segmentation to atlas space to all segmentations in a folder.""" - + """Return pixel_points, centroids, points_len, centroids_len, segmentation_filenames, """ # This should be loaded above and passed as an argument slices = load_visualign_json(quint_alignment) @@ -103,25 +104,37 @@ def folder_to_atlas_space( for file in glob(folder + "/*") if any([file.endswith(type) for type in segmentation_file_types]) ] + flat_files = [ + file + for file in glob(folder + "/flat_files/*") + if any([file.endswith('.flat')]) + ] # Order segmentations and section_numbers # segmentations = [x for _,x in sorted(zip(section_numbers,segmentations))] # section_numbers.sort() points_list = [None] * len(segmentations) centroids_list = [None] * len(segmentations) + region_areas_list = [None] * len(segmentations) threads = [] + flat_file_nrs = [int(number_sections([ff])[0]) for ff in flat_files] for segmentation_path, index in zip(segmentations, range(len(segmentations))): seg_nr = int(number_sections([segmentation_path])[0]) current_slice_index = np.where([s["nr"] == seg_nr for s in slices]) current_slice = slices[current_slice_index[0][0]] + current_flat_file_index = np.where([f == seg_nr for f in flat_file_nrs]) + current_flat = flat_files[current_flat_file_index[0][0]] x = threading.Thread( target=segmentation_to_atlas_space, args=( current_slice, segmentation_path, + atlas_labels, + current_flat, pixel_id, non_linear, points_list, centroids_list, + region_areas_list, index, method, object_cutoff, @@ -143,6 +156,7 @@ def folder_to_atlas_space( return ( np.array(points), np.array(centroids), + region_areas_list, points_len, centroids_len, segmentations, @@ -152,13 +166,17 @@ def folder_to_atlas_space( def segmentation_to_atlas_space( slice, segmentation_path, + atlas_labels, + flat_file_atlas, pixel_id="auto", non_linear=True, points_list=None, centroids_list=None, + region_areas_list=None, index=None, method="per_pixel", object_cutoff=0, + ): """Combines many functions to convert a segmentation to atlas space. It takes care of deformations.""" @@ -177,6 +195,7 @@ def segmentation_to_atlas_space( seg_width = segmentation.shape[1] reg_height = slice["height"] reg_width = slice["width"] + region_areas = flat_to_dataframe(flat_file_atlas, atlas_labels, (seg_width,seg_height)) # This calculates reg/seg y_scale, x_scale = transform_to_registration( seg_height, seg_width, reg_height, reg_width @@ -226,6 +245,7 @@ def segmentation_to_atlas_space( ) points_list[index] = np.array(points) centroids_list[index] = np.array(centroids) + region_areas_list[index] = region_areas def get_centroids(segmentation, pixel_id, y_scale, x_scale, object_cutoff=0): diff --git a/PyNutil/counting_and_load.py b/PyNutil/counting_and_load.py index f5b1f8dba50e81fab7d13622bf2db89a5de5fd06..6fd426ed8c871da02c6e458244a1633576fc3418 100644 --- a/PyNutil/counting_and_load.py +++ b/PyNutil/counting_and_load.py @@ -1,6 +1,10 @@ import numpy as np import pandas as pd import struct +import matplotlib.pyplot as plt +import os +import nrrd +import cv2 # related to counting and load @@ -84,6 +88,7 @@ def pixel_count_per_region( # Find colours corresponding to each region ID and add to the pandas dataframe # Look up name, r, g, b in df_allen_colours in df_counts_per_label based on "idx" + #Sharon, remove this here new_rows = [] for index, row in df_counts_per_label.iterrows(): mask = df_label_colours["idx"] == row["idx"] @@ -112,13 +117,16 @@ def pixel_count_per_region( """Read flat file and write into an np array""" +"""Read flat file, write into an np array, assign label file values, return array""" - -def flat_to_array(flat_file): +def flat_to_dataframe(flat_file, labelfile, rescaleXY=False): + if rescaleXY: + rescaleX, rescaleY = rescaleXY with open(flat_file, "rb") as f: # I don't know what b is, w and h are the width and height that we get from the # flat file header b, w, h = struct.unpack(">BII", f.read(9)) + print(w, h) # Data is a one dimensional list of values # It has the shape width times height data = struct.unpack(">" + ("xBH"[b] * (w * h)), f.read(b * w * h)) @@ -133,8 +141,31 @@ def flat_to_array(flat_file): image[y, x] = image_data[x + y * w] image_arr = np.array(image) - return image_arr + #return image_arr + if rescaleXY: + w,h= rescaleXY + image_arr = cv2.resize(image_arr, (h, w), interpolation=cv2.INTER_NEAREST) + + + """assign label file values into image array""" + allen_id_image = np.zeros((h, w)) # create an empty image array + coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h))) + values = image_arr[coordsy,coordsx] # assign x,y coords from image_array into values + lbidx = labelfile["idx"].values + allen_id_image = lbidx[values.astype(int)] + #return allen_id_image + + #def count_per_uniqueidx() + """count pixels for unique idx""" + unique_ids, counts = np.unique(allen_id_image, return_counts=True) + + area_per_label = list(zip(unique_ids, counts)) + # create a list of unique regions and pixel counts per region + + df_area_per_label = pd.DataFrame(area_per_label, columns=["idx", "region_area"]) + # create a pandas df with regions and pixel counts + return(df_area_per_label) # Import flat files, count pixels per label, np.unique... etc. nitrc.org/plugins/mwiki/index.php?title=visualign:Deformation @@ -146,3 +177,4 @@ def flat_to_array(flat_file): b,w,h=struct.unpack(">BII",f.read(9)) data=struct.unpack(">"+("xBH"[b]*(w*h)),f.read(b*w*h)) """ + diff --git a/messing_around_files/load_workflow.py b/PyNutil/load_workflow.py similarity index 66% rename from messing_around_files/load_workflow.py rename to PyNutil/load_workflow.py index 1d7d4131b27fd525829313c9180f9223936ea640..ac3dd3d0c49eab6c8947cc467b01749424fe34af 100644 --- a/messing_around_files/load_workflow.py +++ b/PyNutil/load_workflow.py @@ -3,34 +3,32 @@ import struct import matplotlib.pyplot as plt import pandas as pd +import cv2 import numpy as np -from read_and_write import FlattoArray, LabeltoArray +#from read_and_write import flat_to_array, label_to_array +from counting_and_load import flat_to_dataframe base = r"../test_data/tTA_2877_NOP_s037_atlasmap/2877_NOP_tTA_lacZ_Xgal_s037_nl.flat" label = r"../annotation_volumes\allen2017_colours.csv" +##optional +seg = r"../test_data/tTA_2877_NOP_s037_seg/2877_NOP_tTA_lacZ_Xgal_resize_Simple_Seg_s037.png" +segim = cv2.imread(seg) +#the indexing [:2] means the first two values and [::-1] means reverse the list +segXY = segim.shape[:2][::-1] +#image_arr = flat_to_array(base, label) -image_arr = FlattoArray(base) +#plt.imshow(flat_to_array(base, label)) -plt.imshow(FlattoArray(base)) +df_area_per_label = flat_to_dataframe(base, label, segXY) -"""assign label file values into image array""" -labelfile = pd.read_csv(r"../annotation_volumes\allen2017_colours.csv") -allen_id_image = np.zeros((h, w)) # create an empty image array -coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h))) -values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values -lbidx = labelfile["idx"].values -allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array +"""count pixels in np array for unique idx, return pd df""" +#unique_ids, counts = np.unique(allen_id_image, return_counts=True) -plt.imshow(allen_id_image) - -"""count pixels for unique idx""" -unique_ids, counts = np.unique(allen_id_image, return_counts=True) - -area_per_label = list(zip(unique_ids, counts)) +#area_per_label = list(zip(unique_ids, counts)) # create a list of unique regions and pixel counts per region -df_area_per_label = pd.DataFrame(area_per_label, columns=["idx", "area_count"]) +#df_area_per_label = pd.DataFrame(area_per_label, columns=["idx", "area_count"]) # create a pandas df with regions and pixel counts @@ -61,7 +59,7 @@ df_area_per_label_name = pd.DataFrame(new_rows) print(df_area_per_label_name) df_area_per_label_name.to_csv( - "../outputs/test5_s037_area_per_idx.csv", sep=";", na_rep="", index=False + "../outputs/NOP_s037_regionareas.csv", sep=";", na_rep="", index=False ) diff --git a/PyNutil/main.py b/PyNutil/main.py index 8e045e6bb055a76d14e7aa9f17dd4cf7ea28b45d..2e34d566876bf67f47ce211f33a14a013400b6e4 100644 --- a/PyNutil/main.py +++ b/PyNutil/main.py @@ -131,6 +131,7 @@ class PyNutil: atlas_labels = pd.read_csv(f"{atlas_root_path}{atlas_label_path}") print("atlas labels loaded ✅") return atlas_volume, atlas_labels + def get_coordinates(self, non_linear=True, method="all", object_cutoff=0): """Extracts pixel coordinates from the segmentation data. @@ -163,12 +164,14 @@ class PyNutil: ( pixel_points, centroids, + region_areas_list, points_len, centroids_len, segmentation_filenames, ) = folder_to_atlas_space( self.segmentation_folder, self.alignment_json, + self.atlas_labels, pixel_id=self.colour, non_linear=non_linear, method=method, @@ -181,6 +184,7 @@ class PyNutil: self.points_len = points_len self.centroids_len = centroids_len self.segmentation_filenames = segmentation_filenames + self.region_areas_list = region_areas_list def quantify_coordinates(self): """Quantifies the pixel coordinates by region. @@ -207,15 +211,12 @@ class PyNutil: self.pixel_points, self.atlas_volume, scale_factor=1 ) - self.label_df = pixel_count_per_region( - labeled_points, labeled_points_centroids, self.atlas_labels - ) prev_pl = 0 prev_cl = 0 per_section_df = [] current_centroids = None current_points = None - for pl,cl in zip(self.points_len, self.centroids_len): + for pl,cl,ra in zip(self.points_len, self.centroids_len, self.region_areas_list): if hasattr(self, "centroids"): current_centroids = labeled_points_centroids[prev_cl : prev_cl + cl] if hasattr(self, "pixel_points"): @@ -223,10 +224,79 @@ class PyNutil: current_df = pixel_count_per_region( current_points, current_centroids, self.atlas_labels ) - per_section_df.append(current_df) + +# create the df for section report and all report +# pixel_count_per_region returns a df with idx, pixel count, name and RGB. +# ra is region area list from +# merge current_df onto ra (region_areas_list) based on idx column +#(left means use only keys from left frame, preserve key order) + + """ + Merge region areas and object areas onto the atlas label file. + Remove duplicate columns + Calculate and add area_fraction to new column in the df. + """ + all_region_df = self.atlas_labels.merge(ra, on = 'idx', how='left') + current_df_new = all_region_df.merge(current_df, on= 'idx', how= 'left', suffixes= (None,"_y")).drop(columns=["a","VIS", "MSH", "name_y","r_y","g_y","b_y"]) + current_df_new["area_fraction"] = current_df_new["pixel_count"] / current_df_new["region_area"] + current_df_new.fillna(0, inplace=True) + + # Several alternatives for the merge code above + """ + new_rows = [] + for index, row in all_region_df.iterrows(): + mask = current_df["idx"] == row ["idx"] + current_region_row = current_df[mask] + region_area = current_region_row["pixel_count"].values + object_count = current_region_row["object_count"].values + + row["pixel_count"] = region_area[0] + row["object_count"] = object_count[0] + + new_rows.append[row] + + current_df_new = pd.DataFrame(new_rows) + """ + + """ + new_rows = [] + for index, row in current_df.iterrows(): + mask = self.atlas_labels["idx"] == row["idx"] + current_region_row = self.atlas_labels[mask] + current_region_name = current_region_row["name"].values + current_region_red = current_region_row["r"].values + current_region_green = current_region_row["g"].values + current_region_blue = current_region_row["b"].values + + row["name"] = current_region_name[0] + row["r"] = current_region_red[0] + row["g"] = current_region_green[0] + row["b"] = current_region_blue[0] + + new_rows.append(row) + + current_df_new = pd.DataFrame(new_rows)""" + + #per_section_df.append(current_df_new) + per_section_df.append(current_df_new) prev_pl += pl prev_cl += cl + + + ##combine all the slice reports, groupby idx, name, rgb and sum region and object pixels. Remove area_fraction column and recalculate. + self.label_df = pd.concat(per_section_df).groupby(['idx','name','r','g','b']).sum().reset_index().drop(columns=['area_fraction']) + self.label_df["area_fraction"] = self.label_df["pixel_count"] / self.label_df["region_area"] + self.label_df.fillna(0, inplace=True) + """ + Potential source of error: + If there are duplicates in the label file, regional results will be duplicated and summed leading to incorrect results + """ + #reorder the df to match the order of idx column in self.atlas_labels + self.label_df = self.label_df.set_index('idx') + self.label_df = self.label_df.reindex(index=self.atlas_labels['idx']) + self.label_df = self.label_df.reset_index() + self.labeled_points = labeled_points self.labeled_points_centroids = labeled_points_centroids self.per_section_df = per_section_df @@ -250,6 +320,9 @@ class PyNutil: """ if not os.path.exists(output_folder): os.makedirs(output_folder) + + if not os.path.exists(f"{output_folder}/whole_series_report"): + os.makedirs(f"{output_folder}/whole_series_report") if not hasattr(self, "label_df"): print("no quantification found so we will only save the coordinates") @@ -257,13 +330,16 @@ class PyNutil: "if you want to save the quantification please run quantify_coordinates" ) else: + self.label_df.to_csv( - f"{output_folder}/counts.csv", sep=";", na_rep="", index=False + f"{output_folder}/whole_series_report/counts.csv", sep=";", na_rep="", index=False ) if not os.path.exists(f"{output_folder}/per_section_meshview"): os.makedirs(f"{output_folder}/per_section_meshview") if not os.path.exists(f"{output_folder}/per_section_reports"): os.makedirs(f"{output_folder}/per_section_reports") + if not os.path.exists(f"{output_folder}/whole_series_meshview"): + os.makedirs(f"{output_folder}/whole_series_meshview") prev_pl = 0 prev_cl = 0 @@ -302,14 +378,14 @@ class PyNutil: write_points_to_meshview( self.pixel_points, self.labeled_points, - f"{output_folder}/pixels_meshview.json", + f"{output_folder}/whole_series_meshview/pixels_meshview.json", self.atlas_labels, ) if hasattr(self, "centroids"): write_points_to_meshview( self.centroids, self.labeled_points_centroids, - f"{output_folder}/objects_meshview.json", + f"{output_folder}/whole_series_meshview/objects_meshview.json", self.atlas_labels, ) print("analysis saved ✅") diff --git a/PyNutil/read_and_write.py b/PyNutil/read_and_write.py index a662371a333bfb5f30d8f859829e2f712ff741f8..db9be5db3597a394623781e8249df8b808769d60 100644 --- a/PyNutil/read_and_write.py +++ b/PyNutil/read_and_write.py @@ -60,8 +60,8 @@ def save_dataframe_as_csv(df_to_save, output_csv): df_to_save.to_csv(output_csv, sep=";", na_rep="", index=False) -def flat_to_array(flatfile): - """Read flat file and write into an np array, return array""" +def flat_to_array(flatfile, labelfile): + """Read flat file, write into an np array, assign label file values, return array""" with open(flatfile, "rb") as f: # i dont know what b is, w and h are the width and height that we get from the # flat file header @@ -80,7 +80,16 @@ def flat_to_array(flatfile): image[y, x] = imagedata[x + y * w] image_arr = np.array(image) - return image_arr + #return image_arr + + """assign label file values into image array""" + labelfile = pd.read_csv(labelfile) + allen_id_image = np.zeros((h, w)) # create an empty image array + coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h))) + values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values + lbidx = labelfile["idx"].values + allen_id_image = lbidx[values.astype(int)] + return allen_id_image def label_to_array(label_path, image_array): @@ -111,5 +120,6 @@ def files_in_directory(directory): def read_atlas_volume(atlas_volume_path): + """return data from atlas volume""" data, header = nrrd.read(atlas_volume_path) return data diff --git a/annotation_volumes/allen2017_colours.csv b/annotation_volumes/allen2017_colours.csv new file mode 100644 index 0000000000000000000000000000000000000000..8c942d0ea895fa53fc6b419a59681aaf4d2a0276 --- /dev/null +++ b/annotation_volumes/allen2017_colours.csv @@ -0,0 +1,1329 @@ +idx,name,r,g,b,a,VIS,MSH +0,Clear Label,0,0,0,1.0,1.0,1.0 +997,root,255,255,255,1.0,1.0,1.0 +8,Basic cell groups and regions,191,218,227,1.0,1.0,1.0 +567,Cerebrum,176,240,255,1.0,1.0,1.0 +688,Cerebral cortex,176,255,184,1.0,1.0,1.0 +695,Cortical plate,112,255,112,1.0,1.0,1.0 +315,Isocortex,112,255,113,1.0,1.0,1.0 +184,"Frontal pole, cerebral cortex",38,143,69,1.0,1.0,1.0 +68,"Frontal pole, layer 1",38,143,69,1.0,1.0,1.0 +667,"Frontal pole, layer 2/3",38,143,69,1.0,1.0,1.0 +526157192,"Frontal pole, layer 5",38,143,69,1.0,1.0,1.0 +526157196,"Frontal pole, layer 6a",38,143,69,1.0,1.0,1.0 +526322264,"Frontal pole, layer 6b",38,143,69,1.0,1.0,1.0 +500,Somatomotor areas,31,157,90,1.0,1.0,1.0 +107,"Somatomotor areas, Layer 1",31,157,90,1.0,1.0,1.0 +219,"Somatomotor areas, Layer 2/3",31,157,90,1.0,1.0,1.0 +299,"Somatomotor areas, Layer 5",31,157,90,1.0,1.0,1.0 +644,"Somatomotor areas, Layer 6a",31,157,90,1.0,1.0,1.0 +947,"Somatomotor areas, Layer 6b",31,157,90,1.0,1.0,1.0 +985,Primary motor area,31,157,90,1.0,1.0,1.0 +320,"Primary motor area, Layer 1",31,157,90,1.0,1.0,1.0 +943,"Primary motor area, Layer 2/3",31,157,90,1.0,1.0,1.0 +648,"Primary motor area, Layer 5",31,157,90,1.0,1.0,1.0 +844,"Primary motor area, Layer 6a",31,157,90,1.0,1.0,1.0 +882,"Primary motor area, Layer 6b",31,157,90,1.0,1.0,1.0 +993,Secondary motor area,31,157,90,1.0,1.0,1.0 +656,"Secondary motor area, layer 1",31,157,90,1.0,1.0,1.0 +962,"Secondary motor area, layer 2/3",31,157,90,1.0,1.0,1.0 +767,"Secondary motor area, layer 5",31,157,90,1.0,1.0,1.0 +1021,"Secondary motor area, layer 6a",31,157,90,1.0,1.0,1.0 +1085,"Secondary motor area, layer 6b",31,157,90,1.0,1.0,1.0 +453,Somatosensory areas,24,128,100,1.0,1.0,1.0 +12993,"Somatosensory areas, layer 1",24,128,100,1.0,1.0,1.0 +12994,"Somatosensory areas, layer 2/3",24,128,100,1.0,1.0,1.0 +12995,"Somatosensory areas, layer 4",24,128,100,1.0,1.0,1.0 +12996,"Somatosensory areas, layer 5",24,128,100,1.0,1.0,1.0 +12997,"Somatosensory areas, layer 6a",24,128,100,1.0,1.0,1.0 +12998,"Somatosensory areas, layer 6b",24,128,100,1.0,1.0,1.0 +322,Primary somatosensory area,24,128,100,1.0,1.0,1.0 +793,"Primary somatosensory area, layer 1",24,128,100,1.0,1.0,1.0 +346,"Primary somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0 +865,"Primary somatosensory area, layer 4",24,128,100,1.0,1.0,1.0 +921,"Primary somatosensory area, layer 5",24,128,100,1.0,1.0,1.0 +686,"Primary somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0 +719,"Primary somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0 +353,"Primary somatosensory area, nose",24,128,100,1.0,1.0,1.0 +558,"Primary somatosensory area, nose, layer 1",24,128,100,1.0,1.0,1.0 +838,"Primary somatosensory area, nose, layer 2/3",24,128,100,1.0,1.0,1.0 +654,"Primary somatosensory area, nose, layer 4",24,128,100,1.0,1.0,1.0 +702,"Primary somatosensory area, nose, layer 5",24,128,100,1.0,1.0,1.0 +889,"Primary somatosensory area, nose, layer 6a",24,128,100,1.0,1.0,1.0 +929,"Primary somatosensory area, nose, layer 6b",24,128,100,1.0,1.0,1.0 +329,"Primary somatosensory area, barrel field",24,128,100,1.0,1.0,1.0 +981,"Primary somatosensory area, barrel field, layer 1",24,128,100,1.0,1.0,1.0 +201,"Primary somatosensory area, barrel field, layer 2/3",24,128,100,1.0,1.0,1.0 +1047,"Primary somatosensory area, barrel field, layer 4",24,128,100,1.0,1.0,1.0 +1070,"Primary somatosensory area, barrel field, layer 5",24,128,100,1.0,1.0,1.0 +1038,"Primary somatosensory area, barrel field, layer 6a",24,128,100,1.0,1.0,1.0 +1062,"Primary somatosensory area, barrel field, layer 6b",24,128,100,1.0,1.0,1.0 +480149202,Rostrolateral lateral visual area,24,128,100,1.0,1.0,1.0 +480149206,"Rostrolateral lateral visual area, layer 1",24,128,100,1.0,1.0,1.0 +480149210,"Rostrolateral lateral visual area, layer 2/3",24,128,100,1.0,1.0,1.0 +480149214,"Rostrolateral lateral visual area, layer 4",24,128,100,1.0,1.0,1.0 +480149218,"Rostrolateral lateral visual area,layer 5",24,128,100,1.0,1.0,1.0 +480149222,"Rostrolateral lateral visual area, layer 6a",24,128,100,1.0,1.0,1.0 +480149226,"Rostrolateral lateral visual area, layer 6b",24,128,100,1.0,1.0,1.0 +337,"Primary somatosensory area, lower limb",24,128,100,1.0,1.0,1.0 +1030,"Primary somatosensory area, lower limb, layer 1",24,128,100,1.0,1.0,1.0 +113,"Primary somatosensory area, lower limb, layer 2/3",24,128,100,1.0,1.0,1.0 +1094,"Primary somatosensory area, lower limb, layer 4",24,128,100,1.0,1.0,1.0 +1128,"Primary somatosensory area, lower limb, layer 5",24,128,100,1.0,1.0,1.0 +478,"Primary somatosensory area, lower limb, layer 6a",24,128,100,1.0,1.0,1.0 +510,"Primary somatosensory area, lower limb, layer 6b",24,128,100,1.0,1.0,1.0 +345,"Primary somatosensory area, mouth",24,128,100,1.0,1.0,1.0 +878,"Primary somatosensory area, mouth, layer 1",24,128,100,1.0,1.0,1.0 +657,"Primary somatosensory area, mouth, layer 2/3",24,128,100,1.0,1.0,1.0 +950,"Primary somatosensory area, mouth, layer 4",24,128,100,1.0,1.0,1.0 +974,"Primary somatosensory area, mouth, layer 5",24,128,100,1.0,1.0,1.0 +1102,"Primary somatosensory area, mouth, layer 6a",24,128,100,1.0,1.0,1.0 +2,"Primary somatosensory area, mouth, layer 6b",24,128,100,1.0,1.0,1.0 +369,"Primary somatosensory area, upper limb",24,128,100,1.0,1.0,1.0 +450,"Primary somatosensory area, upper limb, layer 1",24,128,100,1.0,1.0,1.0 +854,"Primary somatosensory area, upper limb, layer 2/3",24,128,100,1.0,1.0,1.0 +577,"Primary somatosensory area, upper limb, layer 4",24,128,100,1.0,1.0,1.0 +625,"Primary somatosensory area, upper limb, layer 5",24,128,100,1.0,1.0,1.0 +945,"Primary somatosensory area, upper limb, layer 6a",24,128,100,1.0,1.0,1.0 +1026,"Primary somatosensory area, upper limb, layer 6b",24,128,100,1.0,1.0,1.0 +361,"Primary somatosensory area, trunk",24,128,100,1.0,1.0,1.0 +1006,"Primary somatosensory area, trunk, layer 1",24,128,100,1.0,1.0,1.0 +670,"Primary somatosensory area, trunk, layer 2/3",24,128,100,1.0,1.0,1.0 +1086,"Primary somatosensory area, trunk, layer 4",24,128,100,1.0,1.0,1.0 +1111,"Primary somatosensory area, trunk, layer 5",24,128,100,1.0,1.0,1.0 +9,"Primary somatosensory area, trunk, layer 6a",24,128,100,1.0,1.0,1.0 +461,"Primary somatosensory area, trunk, layer 6b",24,128,100,1.0,1.0,1.0 +182305689,"Primary somatosensory area, unassigned",24,128,100,1.0,1.0,1.0 +182305693,"Primary somatosensory area, unassigned, layer 1",24,128,100,1.0,1.0,1.0 +182305697,"Primary somatosensory area, unassigned, layer 2/3",24,128,100,1.0,1.0,1.0 +182305701,"Primary somatosensory area, unassigned, layer 4",24,128,100,1.0,1.0,1.0 +182305705,"Primary somatosensory area, unassigned, layer 5",24,128,100,1.0,1.0,1.0 +182305709,"Primary somatosensory area, unassigned, layer 6a",24,128,100,1.0,1.0,1.0 +182305713,"Primary somatosensory area, unassigned, layer 6b",24,128,100,1.0,1.0,1.0 +378,Supplemental somatosensory area,24,128,100,1.0,1.0,1.0 +873,"Supplemental somatosensory area, layer 1",24,128,100,1.0,1.0,1.0 +806,"Supplemental somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0 +1035,"Supplemental somatosensory area, layer 4",24,128,100,1.0,1.0,1.0 +1090,"Supplemental somatosensory area, layer 5",24,128,100,1.0,1.0,1.0 +862,"Supplemental somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0 +893,"Supplemental somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0 +1057,Gustatory areas,0,156,117,1.0,1.0,1.0 +36,"Gustatory areas, layer 1",0,156,117,1.0,1.0,1.0 +180,"Gustatory areas, layer 2/3",0,156,117,1.0,1.0,1.0 +148,"Gustatory areas, layer 4",0,156,117,1.0,1.0,1.0 +187,"Gustatory areas, layer 5",0,156,117,1.0,1.0,1.0 +638,"Gustatory areas, layer 6a",0,156,117,1.0,1.0,1.0 +662,"Gustatory areas, layer 6b",0,156,117,1.0,1.0,1.0 +677,Visceral area,17,173,131,1.0,1.0,1.0 +897,"Visceral area, layer 1",17,173,131,1.0,1.0,1.0 +1106,"Visceral area, layer 2/3",17,173,131,1.0,1.0,1.0 +1010,"Visceral area, layer 4",17,173,131,1.0,1.0,1.0 +1058,"Visceral area, layer 5",17,173,131,1.0,1.0,1.0 +857,"Visceral area, layer 6a",17,173,131,1.0,1.0,1.0 +849,"Visceral area, layer 6b",17,173,131,1.0,1.0,1.0 +247,Auditory areas,1,147,153,1.0,1.0,1.0 +1011,Dorsal auditory area,1,147,153,1.0,1.0,1.0 +527,"Dorsal auditory area, layer 1",1,147,153,1.0,1.0,1.0 +600,"Dorsal auditory area, layer 2/3",1,147,153,1.0,1.0,1.0 +678,"Dorsal auditory area, layer 4",1,147,153,1.0,1.0,1.0 +252,"Dorsal auditory area, layer 5",1,147,153,1.0,1.0,1.0 +156,"Dorsal auditory area, layer 6a",1,147,153,1.0,1.0,1.0 +243,"Dorsal auditory area, layer 6b",1,147,153,1.0,1.0,1.0 +480149230,Laterolateral anterior visual area,1,147,153,1.0,1.0,1.0 +480149234,"Laterolateral anterior visual area, layer 1",1,147,153,1.0,1.0,1.0 +480149238,"Laterolateral anterior visual area, layer 2/3",1,147,153,1.0,1.0,1.0 +480149242,"Laterolateral anterior visual area, layer 4",1,147,153,1.0,1.0,1.0 +480149246,"Laterolateral anterior visual area,layer 5",1,147,153,1.0,1.0,1.0 +480149250,"Laterolateral anterior visual area, layer 6a",1,147,153,1.0,1.0,1.0 +480149254,"Laterolateral anterior visual area, layer 6b",1,147,153,1.0,1.0,1.0 +1002,Primary auditory area,1,147,153,1.0,1.0,1.0 +735,"Primary auditory area, layer 1",1,147,153,1.0,1.0,1.0 +251,"Primary auditory area, layer 2/3",1,147,153,1.0,1.0,1.0 +816,"Primary auditory area, layer 4",1,147,153,1.0,1.0,1.0 +847,"Primary auditory area, layer 5",1,147,153,1.0,1.0,1.0 +954,"Primary auditory area, layer 6a",1,147,153,1.0,1.0,1.0 +1005,"Primary auditory area, layer 6b",1,147,153,1.0,1.0,1.0 +1027,Posterior auditory area,1,147,153,1.0,1.0,1.0 +696,"Posterior auditory area, layer 1",1,147,153,1.0,1.0,1.0 +643,"Posterior auditory area, layer 2/3",1,147,153,1.0,1.0,1.0 +759,"Posterior auditory area, layer 4",1,147,153,1.0,1.0,1.0 +791,"Posterior auditory area, layer 5",1,147,153,1.0,1.0,1.0 +249,"Posterior auditory area, layer 6a",1,147,153,1.0,1.0,1.0 +456,"Posterior auditory area, layer 6b",1,147,153,1.0,1.0,1.0 +1018,Ventral auditory area,1,147,153,1.0,1.0,1.0 +959,"Ventral auditory area, layer 1",1,147,153,1.0,1.0,1.0 +755,"Ventral auditory area, layer 2/3",1,147,153,1.0,1.0,1.0 +990,"Ventral auditory area, layer 4",1,147,153,1.0,1.0,1.0 +1023,"Ventral auditory area, layer 5",1,147,153,1.0,1.0,1.0 +520,"Ventral auditory area, layer 6a",1,147,153,1.0,1.0,1.0 +598,"Ventral auditory area, layer 6b",1,147,153,1.0,1.0,1.0 +669,Visual areas,8,133,140,1.0,1.0,1.0 +801,"Visual areas, layer 1",8,133,140,1.0,1.0,1.0 +561,"Visual areas, layer 2/3",8,133,140,1.0,1.0,1.0 +913,"Visual areas, layer 4",8,133,140,1.0,1.0,1.0 +937,"Visual areas, layer 5",8,133,140,1.0,1.0,1.0 +457,"Visual areas, layer 6a",8,133,140,1.0,1.0,1.0 +497,"Visual areas, layer 6b",8,133,140,1.0,1.0,1.0 +402,Anterolateral visual area,8,133,140,1.0,1.0,1.0 +1074,"Anterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0 +905,"Anterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +1114,"Anterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0 +233,"Anterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0 +601,"Anterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0 +649,"Anterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0 +394,Anteromedial visual area,8,133,140,1.0,1.0,1.0 +281,"Anteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0 +1066,"Anteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +401,"Anteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0 +433,"Anteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0 +1046,"Anteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0 +441,"Anteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0 +409,Lateral visual area,8,133,140,1.0,1.0,1.0 +421,"Lateral visual area, layer 1",8,133,140,1.0,1.0,1.0 +973,"Lateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +573,"Lateral visual area, layer 4",8,133,140,1.0,1.0,1.0 +613,"Lateral visual area, layer 5",8,133,140,1.0,1.0,1.0 +74,"Lateral visual area, layer 6a",8,133,140,1.0,1.0,1.0 +121,"Lateral visual area, layer 6b",8,133,140,1.0,1.0,1.0 +385,Primary visual area,8,133,140,1.0,1.0,1.0 +593,"Primary visual area, layer 1",8,133,140,1.0,1.0,1.0 +821,"Primary visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +721,"Primary visual area, layer 4",8,133,140,1.0,1.0,1.0 +778,"Primary visual area, layer 5",8,133,140,1.0,1.0,1.0 +33,"Primary visual area, layer 6a",8,133,140,1.0,1.0,1.0 +305,"Primary visual area, layer 6b",8,133,140,1.0,1.0,1.0 +425,Posterolateral visual area,8,133,140,1.0,1.0,1.0 +750,"Posterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0 +269,"Posterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +869,"Posterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0 +902,"Posterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0 +377,"Posterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0 +393,"Posterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0 +533,posteromedial visual area,8,133,140,1.0,1.0,1.0 +805,"posteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0 +41,"posteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0 +501,"posteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0 +565,"posteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0 +257,"posteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0 +469,"posteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0 +312782574,Laterointermediate area,8,133,140,1.0,1.0,1.0 +312782578,"Laterointermediate area, layer 1",8,133,140,1.0,1.0,1.0 +312782582,"Laterointermediate area, layer 2/3",8,133,140,1.0,1.0,1.0 +312782586,"Laterointermediate area, layer 4",8,133,140,1.0,1.0,1.0 +312782590,"Laterointermediate area, layer 5",8,133,140,1.0,1.0,1.0 +312782594,"Laterointermediate area, layer 6a",8,133,140,1.0,1.0,1.0 +312782598,"Laterointermediate area, layer 6b",8,133,140,1.0,1.0,1.0 +312782628,Postrhinal area,8,133,140,1.0,1.0,1.0 +312782632,"Postrhinal area, layer 1",8,133,140,1.0,1.0,1.0 +312782636,"Postrhinal area, layer 2/3",8,133,140,1.0,1.0,1.0 +312782640,"Postrhinal area, layer 4",8,133,140,1.0,1.0,1.0 +312782644,"Postrhinal area, layer 5",8,133,140,1.0,1.0,1.0 +312782648,"Postrhinal area, layer 6a",8,133,140,1.0,1.0,1.0 +312782652,"Postrhinal area, layer 6b",8,133,140,1.0,1.0,1.0 +31,Anterior cingulate area,64,166,102,1.0,1.0,1.0 +572,"Anterior cingulate area, layer 1",64,166,102,1.0,1.0,1.0 +1053,"Anterior cingulate area, layer 2/3",64,166,102,1.0,1.0,1.0 +739,"Anterior cingulate area, layer 5",64,166,102,1.0,1.0,1.0 +179,"Anterior cingulate area, layer 6a",64,166,102,1.0,1.0,1.0 +227,"Anterior cingulate area, layer 6b",64,166,102,1.0,1.0,1.0 +39,"Anterior cingulate area, dorsal part",64,166,102,1.0,1.0,1.0 +935,"Anterior cingulate area, dorsal part, layer 1",64,166,102,1.0,1.0,1.0 +211,"Anterior cingulate area, dorsal part, layer 2/3",64,166,102,1.0,1.0,1.0 +1015,"Anterior cingulate area, dorsal part, layer 5",64,166,102,1.0,1.0,1.0 +919,"Anterior cingulate area, dorsal part, layer 6a",64,166,102,1.0,1.0,1.0 +927,"Anterior cingulate area, dorsal part, layer 6b",64,166,102,1.0,1.0,1.0 +48,"Anterior cingulate area, ventral part",64,166,102,1.0,1.0,1.0 +588,"Anterior cingulate area, ventral part, layer 1",64,166,102,1.0,1.0,1.0 +296,"Anterior cingulate area, ventral part, layer 2/3",64,166,102,1.0,1.0,1.0 +772,"Anterior cingulate area, ventral part, layer 5",64,166,102,1.0,1.0,1.0 +810,"Anterior cingulate area, ventral part, 6a",64,166,102,1.0,1.0,1.0 +819,"Anterior cingulate area, ventral part, 6b",64,166,102,1.0,1.0,1.0 +972,Prelimbic area,47,168,80,1.0,1.0,1.0 +171,"Prelimbic area, layer 1",47,168,80,1.0,1.0,1.0 +195,"Prelimbic area, layer 2",47,168,80,1.0,1.0,1.0 +304,"Prelimbic area, layer 2/3",47,168,80,1.0,1.0,1.0 +363,"Prelimbic area, layer 5",47,168,80,1.0,1.0,1.0 +84,"Prelimbic area, layer 6a",47,168,80,1.0,1.0,1.0 +132,"Prelimbic area, layer 6b",47,168,80,1.0,1.0,1.0 +44,Infralimbic area,89,179,99,1.0,1.0,1.0 +707,"Infralimbic area, layer 1",89,179,99,1.0,1.0,1.0 +747,"Infralimbic area, layer 2",89,179,99,1.0,1.0,1.0 +556,"Infralimbic area, layer 2/3",89,179,99,1.0,1.0,1.0 +827,"Infralimbic area, layer 5",89,179,99,1.0,1.0,1.0 +1054,"Infralimbic area, layer 6a",89,179,99,1.0,1.0,1.0 +1081,"Infralimbic area, layer 6b",89,179,99,1.0,1.0,1.0 +714,Orbital area,36,138,94,1.0,1.0,1.0 +264,"Orbital area, layer 1",36,138,94,1.0,1.0,1.0 +492,"Orbital area, layer 2/3",36,138,94,1.0,1.0,1.0 +352,"Orbital area, layer 5",36,138,94,1.0,1.0,1.0 +476,"Orbital area, layer 6a",36,138,94,1.0,1.0,1.0 +516,"Orbital area, layer 6b",36,138,94,1.0,1.0,1.0 +723,"Orbital area, lateral part",36,138,94,1.0,1.0,1.0 +448,"Orbital area, lateral part, layer 1",36,138,94,1.0,1.0,1.0 +412,"Orbital area, lateral part, layer 2/3",36,138,94,1.0,1.0,1.0 +630,"Orbital area, lateral part, layer 5",36,138,94,1.0,1.0,1.0 +440,"Orbital area, lateral part, layer 6a",36,138,94,1.0,1.0,1.0 +488,"Orbital area, lateral part, layer 6b",36,138,94,1.0,1.0,1.0 +731,"Orbital area, medial part",36,138,94,1.0,1.0,1.0 +484,"Orbital area, medial part, layer 1",36,138,94,1.0,1.0,1.0 +524,"Orbital area, medial part, layer 2",36,138,94,1.0,1.0,1.0 +582,"Orbital area, medial part, layer 2/3",36,138,94,1.0,1.0,1.0 +620,"Orbital area, medial part, layer 5",36,138,94,1.0,1.0,1.0 +910,"Orbital area, medial part, layer 6a",36,138,94,1.0,1.0,1.0 +527696977,"Orbital area, medial part, layer 6b",36,138,94,1.0,1.0,1.0 +738,"Orbital area, ventral part",36,138,94,1.0,1.0,1.0 +746,"Orbital area, ventrolateral part",36,138,94,1.0,1.0,1.0 +969,"Orbital area, ventrolateral part, layer 1",36,138,94,1.0,1.0,1.0 +288,"Orbital area, ventrolateral part, layer 2/3",36,138,94,1.0,1.0,1.0 +1125,"Orbital area, ventrolateral part, layer 5",36,138,94,1.0,1.0,1.0 +608,"Orbital area, ventrolateral part, layer 6a",36,138,94,1.0,1.0,1.0 +680,"Orbital area, ventrolateral part, layer 6b",36,138,94,1.0,1.0,1.0 +95,Agranular insular area,33,152,102,1.0,1.0,1.0 +104,"Agranular insular area, dorsal part",33,152,102,1.0,1.0,1.0 +996,"Agranular insular area, dorsal part, layer 1",33,152,102,1.0,1.0,1.0 +328,"Agranular insular area, dorsal part, layer 2/3",33,152,102,1.0,1.0,1.0 +1101,"Agranular insular area, dorsal part, layer 5",33,152,102,1.0,1.0,1.0 +783,"Agranular insular area, dorsal part, layer 6a",33,152,102,1.0,1.0,1.0 +831,"Agranular insular area, dorsal part, layer 6b",33,152,102,1.0,1.0,1.0 +111,"Agranular insular area, posterior part",33,152,102,1.0,1.0,1.0 +120,"Agranular insular area, posterior part, layer 1",33,152,102,1.0,1.0,1.0 +163,"Agranular insular area, posterior part, layer 2/3",33,152,102,1.0,1.0,1.0 +344,"Agranular insular area, posterior part, layer 5",33,152,102,1.0,1.0,1.0 +314,"Agranular insular area, posterior part, layer 6a",33,152,102,1.0,1.0,1.0 +355,"Agranular insular area, posterior part, layer 6b",33,152,102,1.0,1.0,1.0 +119,"Agranular insular area, ventral part",33,152,102,1.0,1.0,1.0 +704,"Agranular insular area, ventral part, layer 1",33,152,102,1.0,1.0,1.0 +694,"Agranular insular area, ventral part, layer 2/3",33,152,102,1.0,1.0,1.0 +800,"Agranular insular area, ventral part, layer 5",33,152,102,1.0,1.0,1.0 +675,"Agranular insular area, ventral part, layer 6a",33,152,102,1.0,1.0,1.0 +699,"Agranular insular area, ventral part, layer 6b",33,152,102,1.0,1.0,1.0 +254,Retrosplenial area,26,166,152,1.0,1.0,1.0 +894,"Retrosplenial area, lateral agranular part",26,166,152,1.0,1.0,1.0 +671,"Retrosplenial area, lateral agranular part, layer 1",26,166,152,1.0,1.0,1.0 +965,"Retrosplenial area, lateral agranular part, layer 2/3",26,166,152,1.0,1.0,1.0 +774,"Retrosplenial area, lateral agranular part, layer 5",26,166,152,1.0,1.0,1.0 +906,"Retrosplenial area, lateral agranular part, layer 6a",26,166,152,1.0,1.0,1.0 +279,"Retrosplenial area, lateral agranular part, layer 6b",26,166,152,1.0,1.0,1.0 +480149258,Mediomedial anterior visual area,26,166,152,1.0,1.0,1.0 +480149262,"Mediomedial anterior visual area, layer 1",26,166,152,1.0,1.0,1.0 +480149266,"Mediomedial anterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0 +480149270,"Mediomedial anterior visual area, layer 4",26,166,152,1.0,1.0,1.0 +480149274,"Mediomedial anterior visual area,layer 5",26,166,152,1.0,1.0,1.0 +480149278,"Mediomedial anterior visual area, layer 6a",26,166,152,1.0,1.0,1.0 +480149282,"Mediomedial anterior visual area, layer 6b",26,166,152,1.0,1.0,1.0 +480149286,Mediomedial posterior visual area,26,166,152,1.0,1.0,1.0 +480149290,"Mediomedial posterior visual area, layer 1",26,166,152,1.0,1.0,1.0 +480149294,"Mediomedial posterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0 +480149298,"Mediomedial posterior visual area, layer 4",26,166,152,1.0,1.0,1.0 +480149302,"Mediomedial posterior visual area,layer 5",26,166,152,1.0,1.0,1.0 +480149306,"Mediomedial posterior visual area, layer 6a",26,166,152,1.0,1.0,1.0 +480149310,"Mediomedial posterior visual area, layer 6b",26,166,152,1.0,1.0,1.0 +480149314,Medial visual area,26,166,152,1.0,1.0,1.0 +480149318,"Medial visual area, layer 1",26,166,152,1.0,1.0,1.0 +480149322,"Medial visual area, layer 2/3",26,166,152,1.0,1.0,1.0 +480149326,"Medial visual area, layer 4",26,166,152,1.0,1.0,1.0 +480149330,"Medial visual area,layer 5",26,166,152,1.0,1.0,1.0 +480149334,"Medial visual area, layer 6a",26,166,152,1.0,1.0,1.0 +480149338,"Medial visual area, layer 6b",26,166,152,1.0,1.0,1.0 +879,"Retrosplenial area, dorsal part",26,166,152,1.0,1.0,1.0 +442,"Retrosplenial area, dorsal part, layer 1",26,166,152,1.0,1.0,1.0 +434,"Retrosplenial area, dorsal part, layer 2/3",26,166,152,1.0,1.0,1.0 +545,"Retrosplenial area, dorsal part, layer 4",26,166,152,1.0,1.0,1.0 +610,"Retrosplenial area, dorsal part, layer 5",26,166,152,1.0,1.0,1.0 +274,"Retrosplenial area, dorsal part, layer 6a",26,166,152,1.0,1.0,1.0 +330,"Retrosplenial area, dorsal part, layer 6b",26,166,152,1.0,1.0,1.0 +886,"Retrosplenial area, ventral part",26,166,152,1.0,1.0,1.0 +542,"Retrosplenial area, ventral part, layer 1",26,166,152,1.0,1.0,1.0 +606,"Retrosplenial area, ventral part, layer 2",26,166,152,1.0,1.0,1.0 +430,"Retrosplenial area, ventral part, layer 2/3",26,166,152,1.0,1.0,1.0 +687,"Retrosplenial area, ventral part, layer 5",26,166,152,1.0,1.0,1.0 +590,"Retrosplenial area, ventral part, layer 6a",26,166,152,1.0,1.0,1.0 +622,"Retrosplenial area, ventral part, layer 6b",26,166,152,1.0,1.0,1.0 +22,Posterior parietal association areas,0,159,172,1.0,1.0,1.0 +532,"Posterior parietal association areas, layer 1",0,159,172,1.0,1.0,1.0 +241,"Posterior parietal association areas, layer 2/3",0,159,172,1.0,1.0,1.0 +635,"Posterior parietal association areas, layer 4",0,159,172,1.0,1.0,1.0 +683,"Posterior parietal association areas, layer 5",0,159,172,1.0,1.0,1.0 +308,"Posterior parietal association areas, layer 6a",0,159,172,1.0,1.0,1.0 +340,"Posterior parietal association areas, layer 6b",0,159,172,1.0,1.0,1.0 +312782546,Anterior area,0,159,172,1.0,1.0,1.0 +312782550,"Anterior area, layer 1",0,159,172,1.0,1.0,1.0 +312782554,"Anterior area, layer 2/3",0,159,172,1.0,1.0,1.0 +312782558,"Anterior area, layer 4",0,159,172,1.0,1.0,1.0 +312782562,"Anterior area, layer 5",0,159,172,1.0,1.0,1.0 +312782566,"Anterior area, layer 6a",0,159,172,1.0,1.0,1.0 +312782570,"Anterior area, layer 6b",0,159,172,1.0,1.0,1.0 +417,Rostrolateral visual area,0,159,172,1.0,1.0,1.0 +312782604,"Rostrolateral area, layer 1",0,159,172,1.0,1.0,1.0 +312782608,"Rostrolateral area, layer 2/3",0,159,172,1.0,1.0,1.0 +312782612,"Rostrolateral area, layer 4",0,159,172,1.0,1.0,1.0 +312782616,"Rostrolateral area, layer 5",0,159,172,1.0,1.0,1.0 +312782620,"Rostrolateral area, layer 6a",0,159,172,1.0,1.0,1.0 +312782624,"Rostrolateral area, layer 6b",0,159,172,1.0,1.0,1.0 +541,Temporal association areas,21,176,179,1.0,1.0,1.0 +97,"Temporal association areas, layer 1",21,176,179,1.0,1.0,1.0 +1127,"Temporal association areas, layer 2/3",21,176,179,1.0,1.0,1.0 +234,"Temporal association areas, layer 4",21,176,179,1.0,1.0,1.0 +289,"Temporal association areas, layer 5",21,176,179,1.0,1.0,1.0 +729,"Temporal association areas, layer 6a",21,176,179,1.0,1.0,1.0 +786,"Temporal association areas, layer 6b",21,176,179,1.0,1.0,1.0 +922,Perirhinal area,14,150,132,1.0,1.0,1.0 +540,"Perirhinal area, layer 1",14,150,132,1.0,1.0,1.0 +888,"Perirhinal area, layer 2/3",14,150,132,1.0,1.0,1.0 +692,"Perirhinal area, layer 5",14,150,132,1.0,1.0,1.0 +335,"Perirhinal area, layer 6a",14,150,132,1.0,1.0,1.0 +368,"Perirhinal area, layer 6b",14,150,132,1.0,1.0,1.0 +895,Ectorhinal area,13,159,145,1.0,1.0,1.0 +836,Ectorhinal area/Layer 1,13,159,145,1.0,1.0,1.0 +427,Ectorhinal area/Layer 2/3,13,159,145,1.0,1.0,1.0 +988,Ectorhinal area/Layer 5,13,159,145,1.0,1.0,1.0 +977,Ectorhinal area/Layer 6a,13,159,145,1.0,1.0,1.0 +1045,Ectorhinal area/Layer 6b,13,159,145,1.0,1.0,1.0 +698,Olfactory areas,154,210,189,1.0,1.0,1.0 +507,Main olfactory bulb,154,210,189,1.0,1.0,1.0 +212,"Main olfactory bulb, glomerular layer",130,199,174,1.0,1.0,1.0 +220,"Main olfactory bulb, granule layer",130,199,174,1.0,1.0,1.0 +228,"Main olfactory bulb, inner plexiform layer",154,210,189,1.0,1.0,1.0 +236,"Main olfactory bulb, mitral layer",130,199,174,1.0,1.0,1.0 +244,"Main olfactory bulb, outer plexiform layer",154,210,189,1.0,1.0,1.0 +151,Accessory olfactory bulb,157,240,210,1.0,1.0,1.0 +188,"Accessory olfactory bulb, glomerular layer",157,240,210,1.0,1.0,1.0 +196,"Accessory olfactory bulb, granular layer",149,228,200,1.0,1.0,1.0 +204,"Accessory olfactory bulb, mitral layer",157,240,210,1.0,1.0,1.0 +159,Anterior olfactory nucleus,84,191,148,1.0,1.0,1.0 +167,"Anterior olfactory nucleus, dorsal part",84,191,148,1.0,1.0,1.0 +175,"Anterior olfactory nucleus, external part",84,191,148,1.0,1.0,1.0 +183,"Anterior olfactory nucleus, lateral part",84,191,148,1.0,1.0,1.0 +191,"Anterior olfactory nucleus, medial part",84,191,148,1.0,1.0,1.0 +199,"Anterior olfactory nucleus, posteroventral part",84,191,148,1.0,1.0,1.0 +160,"Anterior olfactory nucleus, layer 1",84,191,148,1.0,1.0,1.0 +168,"Anterior olfactory nucleus, layer 2",84,191,148,1.0,1.0,1.0 +589,Taenia tecta,98,208,159,1.0,1.0,1.0 +597,"Taenia tecta, dorsal part",98,208,159,1.0,1.0,1.0 +297,"Taenia tecta, dorsal part, layers 1-4",98,208,159,1.0,1.0,1.0 +1034,"Taenia tecta, dorsal part, layer 1",98,208,159,1.0,1.0,1.0 +1042,"Taenia tecta, dorsal part, layer 2",98,208,159,1.0,1.0,1.0 +1050,"Taenia tecta, dorsal part, layer 3",98,208,159,1.0,1.0,1.0 +1059,"Taenia tecta, dorsal part, layer 4",98,208,159,1.0,1.0,1.0 +605,"Taenia tecta, ventral part",98,208,159,1.0,1.0,1.0 +306,"Taenia tecta, ventral part, layers 1-3",98,208,159,1.0,1.0,1.0 +1067,"Taenia tecta, ventral part, layer 1",98,208,159,1.0,1.0,1.0 +1075,"Taenia tecta, ventral part, layer 2",98,208,159,1.0,1.0,1.0 +1082,"Taenia tecta, ventral part, layer 3",98,208,159,1.0,1.0,1.0 +814,Dorsal peduncular area,164,218,164,1.0,1.0,1.0 +496,"Dorsal peduncular area, layer 1",164,218,164,1.0,1.0,1.0 +535,"Dorsal peduncular area, layer 2",164,218,164,1.0,1.0,1.0 +360,"Dorsal peduncular area, layer 2/3",164,218,164,1.0,1.0,1.0 +646,"Dorsal peduncular area, layer 5",164,218,164,1.0,1.0,1.0 +267,"Dorsal peduncular area, layer 6a",164,218,164,1.0,1.0,1.0 +961,Piriform area,106,203,186,1.0,1.0,1.0 +152,"Piriform area, layers 1-3",106,203,186,1.0,1.0,1.0 +276,"Piriform area, molecular layer",106,203,186,1.0,1.0,1.0 +284,"Piriform area, pyramidal layer",106,203,186,1.0,1.0,1.0 +291,"Piriform area, polymorph layer",106,203,186,1.0,1.0,1.0 +619,Nucleus of the lateral olfactory tract,149,228,200,1.0,1.0,1.0 +392,"Nucleus of the lateral olfactory tract, layers 1-3",149,228,200,1.0,1.0,1.0 +260,"Nucleus of the lateral olfactory tract, molecular layer",149,228,200,1.0,1.0,1.0 +268,"Nucleus of the lateral olfactory tract, pyramidal layer",149,228,200,1.0,1.0,1.0 +1139,"Nucleus of the lateral olfactory tract, layer 3",149,228,200,1.0,1.0,1.0 +631,Cortical amygdalar area,97,231,183,1.0,1.0,1.0 +639,"Cortical amygdalar area, anterior part",97,231,183,1.0,1.0,1.0 +192,"Cortical amygdalar area, anterior part, layer 1",97,231,183,1.0,1.0,1.0 +200,"Cortical amygdalar area, anterior part, layer 2",97,231,183,1.0,1.0,1.0 +208,"Cortical amygdalar area, anterior part, layer 3",97,231,183,1.0,1.0,1.0 +647,"Cortical amygdalar area, posterior part",97,231,183,1.0,1.0,1.0 +655,"Cortical amygdalar area, posterior part, lateral zone",97,231,183,1.0,1.0,1.0 +584,"Cortical amygdalar area, posterior part, lateral zone, layers 1-2",97,231,183,1.0,1.0,1.0 +376,"Cortical amygdalar area, posterior part, lateral zone, layers 1-3",97,231,183,1.0,1.0,1.0 +216,"Cortical amygdalar area, posterior part, lateral zone, layer 1",97,231,183,1.0,1.0,1.0 +224,"Cortical amygdalar area, posterior part, lateral zone, layer 2",97,231,183,1.0,1.0,1.0 +232,"Cortical amygdalar area, posterior part, lateral zone, layer 3",97,231,183,1.0,1.0,1.0 +663,"Cortical amygdalar area, posterior part, medial zone",97,231,183,1.0,1.0,1.0 +592,"Cortical amygdalar area, posterior part, medial zone, layers 1-2",97,231,183,1.0,1.0,1.0 +383,"Cortical amygdalar area, posterior part, medial zone, layers 1-3",97,231,183,1.0,1.0,1.0 +240,"Cortical amygdalar area, posterior part, medial zone, layer 1",97,231,183,1.0,1.0,1.0 +248,"Cortical amygdalar area, posterior part, medial zone, layer 2",97,231,183,1.0,1.0,1.0 +256,"Cortical amygdalar area, posterior part, medial zone, layer 3",97,231,183,1.0,1.0,1.0 +788,Piriform-amygdalar area,89,218,171,1.0,1.0,1.0 +400,"Piriform-amygdalar area, layers 1-3",89,218,171,1.0,1.0,1.0 +408,"Piriform-amygdalar area, molecular layer",89,218,171,1.0,1.0,1.0 +416,"Piriform-amygdalar area, pyramidal layer",89,218,171,1.0,1.0,1.0 +424,"Piriform-amygdalar area, polymorph layer",89,218,171,1.0,1.0,1.0 +566,Postpiriform transition area,168,236,211,1.0,1.0,1.0 +517,"Postpiriform transition area, layers 1-3",168,236,211,1.0,1.0,1.0 +1140,"Postpiriform transition area, layers 1",168,236,211,1.0,1.0,1.0 +1141,"Postpiriform transition area, layers 2",168,236,211,1.0,1.0,1.0 +1142,"Postpiriform transition area, layers 3",168,236,211,1.0,1.0,1.0 +1089,Hippocampal formation,126,208,75,1.0,1.0,1.0 +1080,Hippocampal region,126,208,75,1.0,1.0,1.0 +375,Ammon's horn,126,208,75,1.0,1.0,1.0 +382,Field CA1,126,208,75,1.0,1.0,1.0 +391,"Field CA1, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0 +399,"Field CA1, stratum oriens",126,208,75,1.0,1.0,1.0 +407,"Field CA1, pyramidal layer",102,168,61,1.0,1.0,1.0 +415,"Field CA1, stratum radiatum",126,208,75,1.0,1.0,1.0 +423,Field CA2,126,208,75,1.0,1.0,1.0 +431,"Field CA2, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0 +438,"Field CA2, stratum oriens",126,208,75,1.0,1.0,1.0 +446,"Field CA2, pyramidal layer",102,168,61,1.0,1.0,1.0 +454,"Field CA2, stratum radiatum",126,208,75,1.0,1.0,1.0 +463,Field CA3,126,208,75,1.0,1.0,1.0 +471,"Field CA3, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0 +479,"Field CA3, stratum lucidum",126,208,75,1.0,1.0,1.0 +486,"Field CA3, stratum oriens",126,208,75,1.0,1.0,1.0 +495,"Field CA3, pyramidal layer",102,168,61,1.0,1.0,1.0 +504,"Field CA3, stratum radiatum",126,208,75,1.0,1.0,1.0 +726,Dentate gyrus,126,208,75,1.0,1.0,1.0 +10703,"Dentate gyrus, molecular layer",126,208,75,1.0,1.0,1.0 +10704,"Dentate gyrus, polymorph layer",126,208,75,1.0,1.0,1.0 +632,"Dentate gyrus, granule cell layer",102,168,61,1.0,1.0,1.0 +10702,"Dentate gyrus, subgranular zone",126,208,75,1.0,1.0,1.0 +734,Dentate gyrus crest,126,208,75,1.0,1.0,1.0 +742,"Dentate gyrus crest, molecular layer",126,208,75,1.0,1.0,1.0 +751,"Dentate gyrus crest, polymorph layer",126,208,75,1.0,1.0,1.0 +758,"Dentate gyrus crest, granule cell layer",126,208,75,1.0,1.0,1.0 +766,Dentate gyrus lateral blade,126,208,75,1.0,1.0,1.0 +775,"Dentate gyrus lateral blade, molecular layer",126,208,75,1.0,1.0,1.0 +782,"Dentate gyrus lateral blade, polymorph layer",126,208,75,1.0,1.0,1.0 +790,"Dentate gyrus lateral blade, granule cell layer",126,208,75,1.0,1.0,1.0 +799,Dentate gyrus medial blade,126,208,75,1.0,1.0,1.0 +807,"Dentate gyrus medial blade, molecular layer",126,208,75,1.0,1.0,1.0 +815,"Dentate gyrus medial blade, polymorph layer",126,208,75,1.0,1.0,1.0 +823,"Dentate gyrus medial blade, granule cell layer",126,208,75,1.0,1.0,1.0 +982,Fasciola cinerea,126,208,75,1.0,1.0,1.0 +19,Induseum griseum,126,208,75,1.0,1.0,1.0 +822,Retrohippocampal region,50,184,37,1.0,1.0,1.0 +909,Entorhinal area,50,184,37,1.0,1.0,1.0 +918,"Entorhinal area, lateral part",50,184,37,1.0,1.0,1.0 +1121,"Entorhinal area, lateral part, layer 1",50,184,37,1.0,1.0,1.0 +20,"Entorhinal area, lateral part, layer 2",50,184,37,1.0,1.0,1.0 +999,"Entorhinal area, lateral part, layer 2/3",50,184,37,1.0,1.0,1.0 +715,"Entorhinal area, lateral part, layer 2a",50,184,37,1.0,1.0,1.0 +764,"Entorhinal area, lateral part, layer 2b",50,184,37,1.0,1.0,1.0 +52,"Entorhinal area, lateral part, layer 3",50,184,37,1.0,1.0,1.0 +92,"Entorhinal area, lateral part, layer 4",50,184,37,1.0,1.0,1.0 +312,"Entorhinal area, lateral part, layer 4/5",50,184,37,1.0,1.0,1.0 +139,"Entorhinal area, lateral part, layer 5",50,184,37,1.0,1.0,1.0 +387,"Entorhinal area, lateral part, layer 5/6",50,184,37,1.0,1.0,1.0 +28,"Entorhinal area, lateral part, layer 6a",50,184,37,1.0,1.0,1.0 +60,"Entorhinal area, lateral part, layer 6b",50,184,37,1.0,1.0,1.0 +926,"Entorhinal area, medial part, dorsal zone",50,184,37,1.0,1.0,1.0 +526,"Entorhinal area, medial part, dorsal zone, layer 1",50,184,37,1.0,1.0,1.0 +543,"Entorhinal area, medial part, dorsal zone, layer 2",50,184,37,1.0,1.0,1.0 +468,"Entorhinal area, medial part, dorsal zone, layer 2a",50,184,37,1.0,1.0,1.0 +508,"Entorhinal area, medial part, dorsal zone, layer 2b",50,184,37,1.0,1.0,1.0 +664,"Entorhinal area, medial part, dorsal zone, layer 3",50,184,37,1.0,1.0,1.0 +712,"Entorhinal area, medial part, dorsal zone, layer 4",50,184,37,1.0,1.0,1.0 +727,"Entorhinal area, medial part, dorsal zone, layer 5",50,184,37,1.0,1.0,1.0 +550,"Entorhinal area, medial part, dorsal zone, layer 5/6",50,184,37,1.0,1.0,1.0 +743,"Entorhinal area, medial part, dorsal zone, layer 6",50,184,37,1.0,1.0,1.0 +934,"Entorhinal area, medial part, ventral zone",50,184,37,1.0,1.0,1.0 +259,"Entorhinal area, medial part, ventral zone, layer 1",50,184,37,1.0,1.0,1.0 +324,"Entorhinal area, medial part, ventral zone, layer 2",50,184,37,1.0,1.0,1.0 +371,"Entorhinal area, medial part, ventral zone, layer 3",50,184,37,1.0,1.0,1.0 +419,"Entorhinal area, medial part, ventral zone, layer 4",50,184,37,1.0,1.0,1.0 +1133,"Entorhinal area, medial part, ventral zone, layer 5/6",50,184,37,1.0,1.0,1.0 +843,Parasubiculum,114,213,105,1.0,1.0,1.0 +10693,"Parasubiculum, layer 1",114,213,105,1.0,1.0,1.0 +10694,"Parasubiculum, layer 2",114,213,105,1.0,1.0,1.0 +10695,"Parasubiculum, layer 3",114,213,105,1.0,1.0,1.0 +1037,Postsubiculum,72,200,60,1.0,1.0,1.0 +10696,"Postsubiculum, layer 1",72,200,60,1.0,1.0,1.0 +10697,"Postsubiculum, layer 2",72,200,60,1.0,1.0,1.0 +10698,"Postsubiculum, layer 3",72,200,60,1.0,1.0,1.0 +1084,Presubiculum,89,185,71,1.0,1.0,1.0 +10699,"Presubiculum, layer 1",89,185,71,1.0,1.0,1.0 +10700,"Presubiculum, layer 2",89,185,71,1.0,1.0,1.0 +10701,"Presubiculum, layer 3",89,185,71,1.0,1.0,1.0 +502,Subiculum,79,194,68,1.0,1.0,1.0 +509,"Subiculum, dorsal part",79,194,68,1.0,1.0,1.0 +829,"Subiculum, dorsal part, molecular layer",79,194,68,1.0,1.0,1.0 +845,"Subiculum, dorsal part, pyramidal layer",75,181,71,1.0,1.0,1.0 +837,"Subiculum, dorsal part, stratum radiatum",79,194,68,1.0,1.0,1.0 +518,"Subiculum, ventral part",79,194,68,1.0,1.0,1.0 +853,"Subiculum, ventral part, molecular layer",79,194,68,1.0,1.0,1.0 +870,"Subiculum, ventral part, pyramidal layer",75,181,71,1.0,1.0,1.0 +861,"Subiculum, ventral part, stratum radiatum",79,194,68,1.0,1.0,1.0 +484682470,Prosubiculum,88,186,72,1.0,1.0,1.0 +484682475,"Prosubiculum, dorsal part",88,186,72,1.0,1.0,1.0 +484682479,"Prosubiculum, dorsal part, molecular layer",88,186,72,1.0,1.0,1.0 +484682483,"Prosubiculum, dorsal part, pyramidal layer",86,184,75,1.0,1.0,1.0 +484682487,"Prosubiculum, dorsal part, stratum radiatum",88,186,72,1.0,1.0,1.0 +484682492,"Prosubiculum, ventral part",88,186,72,1.0,1.0,1.0 +484682496,"Prosubiculum, ventral part, molecular layer",88,186,72,1.0,1.0,1.0 +484682500,"Prosubiculum, ventral part, pyramidal layer",86,184,75,1.0,1.0,1.0 +484682504,"Prosubiculum, ventral part, stratum radiatum",88,186,72,1.0,1.0,1.0 +589508447,Hippocampo-amygdalar transition area,51,185,50,1.0,1.0,1.0 +484682508,Area prostriata,51,185,50,1.0,1.0,1.0 +703,Cortical subplate,138,218,135,1.0,1.0,1.0 +16,"Layer 6b, isocortex",138,218,135,1.0,1.0,1.0 +583,Claustrum,138,218,135,1.0,1.0,1.0 +942,Endopiriform nucleus,160,238,157,1.0,1.0,1.0 +952,"Endopiriform nucleus, dorsal part",160,238,157,1.0,1.0,1.0 +966,"Endopiriform nucleus, ventral part",160,238,157,1.0,1.0,1.0 +131,Lateral amygdalar nucleus,144,235,141,1.0,1.0,1.0 +295,Basolateral amygdalar nucleus,157,231,156,1.0,1.0,1.0 +303,"Basolateral amygdalar nucleus, anterior part",157,231,156,1.0,1.0,1.0 +311,"Basolateral amygdalar nucleus, posterior part",157,231,156,1.0,1.0,1.0 +451,"Basolateral amygdalar nucleus, ventral part",157,231,156,1.0,1.0,1.0 +319,Basomedial amygdalar nucleus,132,234,129,1.0,1.0,1.0 +327,"Basomedial amygdalar nucleus, anterior part",132,234,129,1.0,1.0,1.0 +334,"Basomedial amygdalar nucleus, posterior part",132,234,129,1.0,1.0,1.0 +780,Posterior amygdalar nucleus,151,236,147,1.0,1.0,1.0 +623,Cerebral nuclei,152,214,249,1.0,1.0,1.0 +477,Striatum,152,214,249,1.0,1.0,1.0 +485,Striatum dorsal region,152,214,249,1.0,1.0,1.0 +672,Caudoputamen,152,214,249,1.0,1.0,1.0 +493,Striatum ventral region,128,205,248,1.0,1.0,1.0 +56,Nucleus accumbens,128,205,248,1.0,1.0,1.0 +998,Fundus of striatum,128,205,248,1.0,1.0,1.0 +754,Olfactory tubercle,128,205,248,1.0,1.0,1.0 +481,Islands of Calleja,128,205,248,1.0,1.0,1.0 +489,Major island of Calleja,128,205,248,1.0,1.0,1.0 +144,"Olfactory tubercle, layers 1-3",128,205,248,1.0,1.0,1.0 +458,"Olfactory tubercle, molecular layer",128,205,248,1.0,1.0,1.0 +465,"Olfactory tubercle, pyramidal layer",128,205,248,1.0,1.0,1.0 +473,"Olfactory tubercle, polymorph layer",128,205,248,1.0,1.0,1.0 +549009199,Lateral strip of striatum,128,205,248,1.0,1.0,1.0 +275,Lateral septal complex,144,203,237,1.0,1.0,1.0 +242,Lateral septal nucleus,144,203,237,1.0,1.0,1.0 +250,"Lateral septal nucleus, caudal (caudodorsal) part",144,203,237,1.0,1.0,1.0 +258,"Lateral septal nucleus, rostral (rostroventral) part",144,203,237,1.0,1.0,1.0 +266,"Lateral septal nucleus, ventral part",144,203,237,1.0,1.0,1.0 +310,Septofimbrial nucleus,144,203,237,1.0,1.0,1.0 +333,Septohippocampal nucleus,144,203,237,1.0,1.0,1.0 +278,Striatum-like amygdalar nuclei,128,192,226,1.0,1.0,1.0 +23,Anterior amygdalar area,128,192,226,1.0,1.0,1.0 +292,Bed nucleus of the accessory olfactory tract,128,192,226,1.0,1.0,1.0 +536,Central amygdalar nucleus,128,192,226,1.0,1.0,1.0 +544,"Central amygdalar nucleus, capsular part",128,192,226,1.0,1.0,1.0 +551,"Central amygdalar nucleus, lateral part",128,192,226,1.0,1.0,1.0 +559,"Central amygdalar nucleus, medial part",128,192,226,1.0,1.0,1.0 +1105,Intercalated amygdalar nucleus,128,192,226,1.0,1.0,1.0 +403,Medial amygdalar nucleus,128,192,226,1.0,1.0,1.0 +411,"Medial amygdalar nucleus, anterodorsal part",128,192,226,1.0,1.0,1.0 +418,"Medial amygdalar nucleus, anteroventral part",128,192,226,1.0,1.0,1.0 +426,"Medial amygdalar nucleus, posterodorsal part",128,192,226,1.0,1.0,1.0 +472,"Medial amygdalar nucleus, posterodorsal part, sublayer a",128,192,226,1.0,1.0,1.0 +480,"Medial amygdalar nucleus, posterodorsal part, sublayer b",128,192,226,1.0,1.0,1.0 +487,"Medial amygdalar nucleus, posterodorsal part, sublayer c",128,192,226,1.0,1.0,1.0 +435,"Medial amygdalar nucleus, posteroventral part",128,192,226,1.0,1.0,1.0 +803,Pallidum,133,153,204,1.0,1.0,1.0 +818,"Pallidum, dorsal region",133,153,204,1.0,1.0,1.0 +1022,"Globus pallidus, external segment",133,153,204,1.0,1.0,1.0 +1031,"Globus pallidus, internal segment",133,153,204,1.0,1.0,1.0 +835,"Pallidum, ventral region",162,177,216,1.0,1.0,1.0 +342,Substantia innominata,162,177,216,1.0,1.0,1.0 +298,Magnocellular nucleus,162,177,216,1.0,1.0,1.0 +826,"Pallidum, medial region",150,167,211,1.0,1.0,1.0 +904,Medial septal complex,150,167,211,1.0,1.0,1.0 +564,Medial septal nucleus,150,167,211,1.0,1.0,1.0 +596,Diagonal band nucleus,150,167,211,1.0,1.0,1.0 +581,Triangular nucleus of septum,150,167,211,1.0,1.0,1.0 +809,"Pallidum, caudal region",179,192,223,1.0,1.0,1.0 +351,Bed nuclei of the stria terminalis,179,192,223,1.0,1.0,1.0 +359,"Bed nuclei of the stria terminalis, anterior division",179,192,223,1.0,1.0,1.0 +537,"Bed nuclei of the stria terminalis, anterior division, anterolateral area",179,192,223,1.0,1.0,1.0 +498,"Bed nuclei of the stria terminalis, anterior division, anteromedial area",179,192,223,1.0,1.0,1.0 +505,"Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus",179,192,223,1.0,1.0,1.0 +513,"Bed nuclei of the stria terminalis, anterior division, fusiform nucleus",179,192,223,1.0,1.0,1.0 +546,"Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus",179,192,223,1.0,1.0,1.0 +521,"Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus",179,192,223,1.0,1.0,1.0 +554,"Bed nuclei of the stria terminalis, anterior division, oval nucleus",179,192,223,1.0,1.0,1.0 +562,"Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus",179,192,223,1.0,1.0,1.0 +529,"Bed nuclei of the stria terminalis, anterior division, ventral nucleus",179,192,223,1.0,1.0,1.0 +367,"Bed nuclei of the stria terminalis, posterior division",179,192,223,1.0,1.0,1.0 +569,"Bed nuclei of the stria terminalis, posterior division, dorsal nucleus",179,192,223,1.0,1.0,1.0 +578,"Bed nuclei of the stria terminalis, posterior division, principal nucleus",179,192,223,1.0,1.0,1.0 +585,"Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus",179,192,223,1.0,1.0,1.0 +594,"Bed nuclei of the stria terminalis, posterior division, transverse nucleus",179,192,223,1.0,1.0,1.0 +602,"Bed nuclei of the stria terminalis, posterior division, strial extension",179,192,223,1.0,1.0,1.0 +287,Bed nucleus of the anterior commissure,179,192,223,1.0,1.0,1.0 +343,Brain stem,255,112,128,1.0,1.0,1.0 +1129,Interbrain,255,112,128,1.0,1.0,1.0 +549,Thalamus,255,112,128,1.0,1.0,1.0 +864,"Thalamus, sensory-motor cortex related",255,128,132,1.0,1.0,1.0 +637,Ventral group of the dorsal thalamus,255,128,132,1.0,1.0,1.0 +629,Ventral anterior-lateral complex of the thalamus,255,128,132,1.0,1.0,1.0 +685,Ventral medial nucleus of the thalamus,255,128,132,1.0,1.0,1.0 +709,Ventral posterior complex of the thalamus,255,128,132,1.0,1.0,1.0 +718,Ventral posterolateral nucleus of the thalamus,255,128,132,1.0,1.0,1.0 +725,"Ventral posterolateral nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0 +733,Ventral posteromedial nucleus of the thalamus,255,128,132,1.0,1.0,1.0 +741,"Ventral posteromedial nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0 +563807435,Posterior triangular thalamic nucleus,255,128,132,1.0,1.0,1.0 +406,Subparafascicular nucleus,255,128,132,1.0,1.0,1.0 +414,"Subparafascicular nucleus, magnocellular part",255,128,132,1.0,1.0,1.0 +422,"Subparafascicular nucleus, parvicellular part",255,128,132,1.0,1.0,1.0 +609,Subparafascicular area,255,128,132,1.0,1.0,1.0 +1044,Peripeduncular nucleus,255,128,132,1.0,1.0,1.0 +1008,"Geniculate group, dorsal thalamus",255,128,132,1.0,1.0,1.0 +475,Medial geniculate complex,255,128,132,1.0,1.0,1.0 +1072,"Medial geniculate complex, dorsal part",255,128,132,1.0,1.0,1.0 +1079,"Medial geniculate complex, ventral part",255,128,132,1.0,1.0,1.0 +1088,"Medial geniculate complex, medial part",255,128,132,1.0,1.0,1.0 +170,Dorsal part of the lateral geniculate complex,255,128,132,1.0,1.0,1.0 +496345664,"Dorsal part of the lateral geniculate complex, shell",255,128,132,1.0,1.0,1.0 +496345668,"Dorsal part of the lateral geniculate complex, core",255,128,132,1.0,1.0,1.0 +496345672,"Dorsal part of the lateral geniculate complex, ipsilateral zone",255,128,132,1.0,1.0,1.0 +856,"Thalamus, polymodal association cortex related",255,144,159,1.0,1.0,1.0 +138,Lateral group of the dorsal thalamus,255,144,159,1.0,1.0,1.0 +218,Lateral posterior nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +1020,Posterior complex of the thalamus,255,144,159,1.0,1.0,1.0 +1029,Posterior limiting nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +325,Suprageniculate nucleus,255,144,159,1.0,1.0,1.0 +560581551,Ethmoid nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +560581555,Retroethmoid nucleus,255,144,159,1.0,1.0,1.0 +239,Anterior group of the dorsal thalamus,255,144,159,1.0,1.0,1.0 +255,Anteroventral nucleus of thalamus,255,144,159,1.0,1.0,1.0 +127,Anteromedial nucleus,255,144,159,1.0,1.0,1.0 +1096,"Anteromedial nucleus, dorsal part",255,144,159,1.0,1.0,1.0 +1104,"Anteromedial nucleus, ventral part",255,144,159,1.0,1.0,1.0 +64,Anterodorsal nucleus,255,144,159,1.0,1.0,1.0 +1120,Interanteromedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +1113,Interanterodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +155,Lateral dorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0 +444,Medial group of the dorsal thalamus,255,144,159,1.0,1.0,1.0 +59,Intermediodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +362,Mediodorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0 +617,"Mediodorsal nucleus of the thalamus, central part",255,144,159,1.0,1.0,1.0 +626,"Mediodorsal nucleus of the thalamus, lateral part",255,144,159,1.0,1.0,1.0 +636,"Mediodorsal nucleus of the thalamus, medial part",255,144,159,1.0,1.0,1.0 +366,Submedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +1077,Perireunensis nucleus,255,144,159,1.0,1.0,1.0 +571,Midline group of the dorsal thalamus,255,144,159,1.0,1.0,1.0 +149,Paraventricular nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +15,Parataenial nucleus,255,144,159,1.0,1.0,1.0 +181,Nucleus of reuniens,255,144,159,1.0,1.0,1.0 +560581559,Xiphoid thalamic nucleus,255,144,159,1.0,1.0,1.0 +51,Intralaminar nuclei of the dorsal thalamus,255,144,159,1.0,1.0,1.0 +189,Rhomboid nucleus,255,144,159,1.0,1.0,1.0 +599,Central medial nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +907,Paracentral nucleus,255,144,159,1.0,1.0,1.0 +575,Central lateral nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +930,Parafascicular nucleus,255,144,159,1.0,1.0,1.0 +560581563,Posterior intralaminar thalamic nucleus,255,144,159,1.0,1.0,1.0 +262,Reticular nucleus of the thalamus,255,144,159,1.0,1.0,1.0 +1014,"Geniculate group, ventral thalamus",255,144,159,1.0,1.0,1.0 +27,Intergeniculate leaflet of the lateral geniculate complex,255,144,159,1.0,1.0,1.0 +563807439,Intermediate geniculate nucleus,255,144,159,1.0,1.0,1.0 +178,Ventral part of the lateral geniculate complex,255,144,159,1.0,1.0,1.0 +300,"Ventral part of the lateral geniculate complex, lateral zone",255,144,159,1.0,1.0,1.0 +316,"Ventral part of the lateral geniculate complex, medial zone",255,144,159,1.0,1.0,1.0 +321,Subgeniculate nucleus,255,144,159,1.0,1.0,1.0 +958,Epithalamus,255,144,159,1.0,1.0,1.0 +483,Medial habenula,255,144,159,1.0,1.0,1.0 +186,Lateral habenula,255,144,159,1.0,1.0,1.0 +953,Pineal body,255,144,159,1.0,1.0,1.0 +1097,Hypothalamus,230,68,56,1.0,1.0,1.0 +157,Periventricular zone,255,93,80,1.0,1.0,1.0 +390,Supraoptic nucleus,255,93,80,1.0,1.0,1.0 +332,Accessory supraoptic group,255,93,80,1.0,1.0,1.0 +432,Nucleus circularis,255,93,80,1.0,1.0,1.0 +38,Paraventricular hypothalamic nucleus,255,93,80,1.0,1.0,1.0 +71,"Paraventricular hypothalamic nucleus, magnocellular division",255,93,80,1.0,1.0,1.0 +47,"Paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part",255,93,80,1.0,1.0,1.0 +79,"Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part",255,93,80,1.0,1.0,1.0 +103,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part",255,93,80,1.0,1.0,1.0 +652,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone",255,93,80,1.0,1.0,1.0 +660,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, medial zone",255,93,80,1.0,1.0,1.0 +94,"Paraventricular hypothalamic nucleus, parvicellular division",255,93,80,1.0,1.0,1.0 +55,"Paraventricular hypothalamic nucleus, parvicellular division, anterior parvicellular part",255,93,80,1.0,1.0,1.0 +87,"Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone",255,93,80,1.0,1.0,1.0 +110,"Paraventricular hypothalamic nucleus, parvicellular division, periventricular part",255,93,80,1.0,1.0,1.0 +30,"Periventricular hypothalamic nucleus, anterior part",255,93,80,1.0,1.0,1.0 +118,"Periventricular hypothalamic nucleus, intermediate part",255,93,80,1.0,1.0,1.0 +223,Arcuate hypothalamic nucleus,255,93,80,1.0,1.0,1.0 +141,Periventricular region,255,85,71,1.0,1.0,1.0 +72,Anterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0 +80,Anterior hypothalamic area,255,85,71,1.0,1.0,1.0 +263,Anteroventral preoptic nucleus,255,85,71,1.0,1.0,1.0 +272,Anteroventral periventricular nucleus,255,85,71,1.0,1.0,1.0 +830,Dorsomedial nucleus of the hypothalamus,255,85,71,1.0,1.0,1.0 +668,"Dorsomedial nucleus of the hypothalamus, anterior part",255,85,71,1.0,1.0,1.0 +676,"Dorsomedial nucleus of the hypothalamus, posterior part",255,85,71,1.0,1.0,1.0 +684,"Dorsomedial nucleus of the hypothalamus, ventral part",255,85,71,1.0,1.0,1.0 +452,Median preoptic nucleus,255,85,71,1.0,1.0,1.0 +523,Medial preoptic area,255,85,71,1.0,1.0,1.0 +763,Vascular organ of the lamina terminalis,255,85,71,1.0,1.0,1.0 +914,Posterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0 +1109,Parastrial nucleus,255,85,71,1.0,1.0,1.0 +1124,Suprachiasmatic preoptic nucleus,255,85,71,1.0,1.0,1.0 +126,"Periventricular hypothalamic nucleus, posterior part",255,85,71,1.0,1.0,1.0 +133,"Periventricular hypothalamic nucleus, preoptic part",255,85,71,1.0,1.0,1.0 +347,Subparaventricular zone,255,85,71,1.0,1.0,1.0 +286,Suprachiasmatic nucleus,255,85,71,1.0,1.0,1.0 +338,Subfornical organ,255,85,71,1.0,1.0,1.0 +576073699,Ventromedial preoptic nucleus,255,85,71,1.0,1.0,1.0 +689,Ventrolateral preoptic nucleus,255,85,71,1.0,1.0,1.0 +467,Hypothalamic medial zone,255,76,62,1.0,1.0,1.0 +88,Anterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0 +700,"Anterior hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0 +708,"Anterior hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0 +716,"Anterior hypothalamic nucleus, dorsal part",255,76,62,1.0,1.0,1.0 +724,"Anterior hypothalamic nucleus, posterior part",255,76,62,1.0,1.0,1.0 +331,Mammillary body,255,76,62,1.0,1.0,1.0 +210,Lateral mammillary nucleus,255,76,62,1.0,1.0,1.0 +491,Medial mammillary nucleus,255,76,62,1.0,1.0,1.0 +732,"Medial mammillary nucleus, median part",255,76,62,1.0,1.0,1.0 +606826647,"Medial mammillary nucleus, lateral part",255,76,62,1.0,1.0,1.0 +606826651,"Medial mammillary nucleus, medial part",255,76,62,1.0,1.0,1.0 +606826655,"Medial mammillary nucleus, posterior part",255,76,62,1.0,1.0,1.0 +606826659,"Medial mammillary nucleus, dorsal part",255,76,62,1.0,1.0,1.0 +525,Supramammillary nucleus,255,76,62,1.0,1.0,1.0 +1110,"Supramammillary nucleus, lateral part",255,76,62,1.0,1.0,1.0 +1118,"Supramammillary nucleus, medial part",255,76,62,1.0,1.0,1.0 +557,Tuberomammillary nucleus,255,76,62,1.0,1.0,1.0 +1126,"Tuberomammillary nucleus, dorsal part",255,76,62,1.0,1.0,1.0 +1,"Tuberomammillary nucleus, ventral part",255,76,62,1.0,1.0,1.0 +515,Medial preoptic nucleus,255,76,62,1.0,1.0,1.0 +740,"Medial preoptic nucleus, central part",255,76,62,1.0,1.0,1.0 +748,"Medial preoptic nucleus, lateral part",255,76,62,1.0,1.0,1.0 +756,"Medial preoptic nucleus, medial part",255,76,62,1.0,1.0,1.0 +980,Dorsal premammillary nucleus,255,76,62,1.0,1.0,1.0 +1004,Ventral premammillary nucleus,255,76,62,1.0,1.0,1.0 +63,"Paraventricular hypothalamic nucleus, descending division",255,76,62,1.0,1.0,1.0 +439,"Paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part",255,76,62,1.0,1.0,1.0 +447,"Paraventricular hypothalamic nucleus, descending division, forniceal part",255,76,62,1.0,1.0,1.0 +455,"Paraventricular hypothalamic nucleus, descending division, lateral parvicellular part",255,76,62,1.0,1.0,1.0 +464,"Paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone",255,76,62,1.0,1.0,1.0 +693,Ventromedial hypothalamic nucleus,255,76,62,1.0,1.0,1.0 +761,"Ventromedial hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0 +769,"Ventromedial hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0 +777,"Ventromedial hypothalamic nucleus, dorsomedial part",255,76,62,1.0,1.0,1.0 +785,"Ventromedial hypothalamic nucleus, ventrolateral part",255,76,62,1.0,1.0,1.0 +946,Posterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0 +290,Hypothalamic lateral zone,242,72,59,1.0,1.0,1.0 +194,Lateral hypothalamic area,242,72,59,1.0,1.0,1.0 +226,Lateral preoptic area,242,72,59,1.0,1.0,1.0 +356,Preparasubthalamic nucleus,242,72,59,1.0,1.0,1.0 +364,Parasubthalamic nucleus,242,72,59,1.0,1.0,1.0 +576073704,Perifornical nucleus,242,72,59,1.0,1.0,1.0 +173,Retrochiasmatic area,242,72,59,1.0,1.0,1.0 +470,Subthalamic nucleus,242,72,59,1.0,1.0,1.0 +614,Tuberal nucleus,242,72,59,1.0,1.0,1.0 +797,Zona incerta,242,72,59,1.0,1.0,1.0 +796,Dopaminergic A13 group,242,72,59,1.0,1.0,1.0 +804,Fields of Forel,242,72,59,1.0,1.0,1.0 +10671,Median eminence,242,72,59,1.0,1.0,1.0 +313,Midbrain,255,100,255,1.0,1.0,1.0 +339,"Midbrain, sensory related",255,122,255,1.0,1.0,1.0 +302,"Superior colliculus, sensory related",255,122,255,1.0,1.0,1.0 +851,"Superior colliculus, optic layer",255,122,255,1.0,1.0,1.0 +842,"Superior colliculus, superficial gray layer",255,122,255,1.0,1.0,1.0 +834,"Superior colliculus, zonal layer",255,122,255,1.0,1.0,1.0 +4,Inferior colliculus,255,122,255,1.0,1.0,1.0 +811,"Inferior colliculus, central nucleus",255,122,255,1.0,1.0,1.0 +820,"Inferior colliculus, dorsal nucleus",255,122,255,1.0,1.0,1.0 +828,"Inferior colliculus, external nucleus",255,122,255,1.0,1.0,1.0 +580,Nucleus of the brachium of the inferior colliculus,255,122,255,1.0,1.0,1.0 +271,Nucleus sagulum,255,122,255,1.0,1.0,1.0 +874,Parabigeminal nucleus,255,122,255,1.0,1.0,1.0 +460,Midbrain trigeminal nucleus,255,122,255,1.0,1.0,1.0 +599626923,Subcommissural organ,255,122,255,1.0,1.0,1.0 +323,"Midbrain, motor related",255,144,255,1.0,1.0,1.0 +381,"Substantia nigra, reticular part",255,144,255,1.0,1.0,1.0 +749,Ventral tegmental area,255,144,255,1.0,1.0,1.0 +607344830,Paranigral nucleus,255,144,255,1.0,1.0,1.0 +246,"Midbrain reticular nucleus, retrorubral area",255,144,255,1.0,1.0,1.0 +128,Midbrain reticular nucleus,255,144,255,1.0,1.0,1.0 +539,"Midbrain reticular nucleus, magnocellular part",255,144,255,1.0,1.0,1.0 +548,"Midbrain reticular nucleus, magnocellular part, general",255,144,255,1.0,1.0,1.0 +555,"Midbrain reticular nucleus, parvicellular part",255,144,255,1.0,1.0,1.0 +294,"Superior colliculus, motor related",255,144,255,1.0,1.0,1.0 +26,"Superior colliculus, motor related, deep gray layer",255,144,255,1.0,1.0,1.0 +42,"Superior colliculus, motor related, deep white layer",255,144,255,1.0,1.0,1.0 +17,"Superior colliculus, motor related, intermediate white layer",255,144,255,1.0,1.0,1.0 +10,"Superior colliculus, motor related, intermediate gray layer",255,144,255,1.0,1.0,1.0 +494,"Superior colliculus, motor related, intermediate gray layer, sublayer a",255,144,255,1.0,1.0,1.0 +503,"Superior colliculus, motor related, intermediate gray layer, sublayer b",255,144,255,1.0,1.0,1.0 +511,"Superior colliculus, motor related, intermediate gray layer, sublayer c",255,144,255,1.0,1.0,1.0 +795,Periaqueductal gray,255,144,255,1.0,1.0,1.0 +50,Precommissural nucleus,255,144,255,1.0,1.0,1.0 +67,Interstitial nucleus of Cajal,255,144,255,1.0,1.0,1.0 +587,Nucleus of Darkschewitsch,255,144,255,1.0,1.0,1.0 +614454277,Supraoculomotor periaqueductal gray,255,144,255,1.0,1.0,1.0 +1100,Pretectal region,255,144,255,1.0,1.0,1.0 +215,Anterior pretectal nucleus,255,144,255,1.0,1.0,1.0 +531,Medial pretectal area,255,144,255,1.0,1.0,1.0 +628,Nucleus of the optic tract,255,144,255,1.0,1.0,1.0 +634,Nucleus of the posterior commissure,255,144,255,1.0,1.0,1.0 +706,Olivary pretectal nucleus,255,144,255,1.0,1.0,1.0 +1061,Posterior pretectal nucleus,255,144,255,1.0,1.0,1.0 +549009203,Retroparafascicular nucleus,255,144,255,1.0,1.0,1.0 +549009207,Intercollicular nucleus,255,144,255,1.0,1.0,1.0 +616,Cuneiform nucleus,255,144,255,1.0,1.0,1.0 +214,Red nucleus,255,144,255,1.0,1.0,1.0 +35,Oculomotor nucleus,255,144,255,1.0,1.0,1.0 +549009211,Medial accesory oculomotor nucleus,255,144,255,1.0,1.0,1.0 +975,Edinger-Westphal nucleus,255,144,255,1.0,1.0,1.0 +115,Trochlear nucleus,255,144,255,1.0,1.0,1.0 +606826663,Paratrochlear nucleus,255,144,255,1.0,1.0,1.0 +757,Ventral tegmental nucleus,255,144,255,1.0,1.0,1.0 +231,Anterior tegmental nucleus,255,144,255,1.0,1.0,1.0 +66,Lateral terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0 +75,Dorsal terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0 +58,Medial terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0 +615,"Substantia nigra, lateral part",255,144,255,1.0,1.0,1.0 +348,"Midbrain, behavioral state related",255,144,255,1.0,1.0,1.0 +374,"Substantia nigra, compact part",255,166,255,1.0,1.0,1.0 +1052,Pedunculopontine nucleus,255,166,255,1.0,1.0,1.0 +165,Midbrain raphe nuclei,255,166,255,1.0,1.0,1.0 +12,Interfascicular nucleus raphe,255,166,255,1.0,1.0,1.0 +100,Interpeduncular nucleus,255,166,255,1.0,1.0,1.0 +607344834,"Interpeduncular nucleus, rostral",255,166,255,1.0,1.0,1.0 +607344838,"Interpeduncular nucleus, caudal",255,166,255,1.0,1.0,1.0 +607344842,"Interpeduncular nucleus, apical",255,166,255,1.0,1.0,1.0 +607344846,"Interpeduncular nucleus, lateral",255,166,255,1.0,1.0,1.0 +607344850,"Interpeduncular nucleus, intermediate",255,166,255,1.0,1.0,1.0 +607344854,"Interpeduncular nucleus, dorsomedial",255,166,255,1.0,1.0,1.0 +607344858,"Interpeduncular nucleus, dorsolateral",255,166,255,1.0,1.0,1.0 +607344862,"Interpeduncular nucleus, rostrolateral",255,166,255,1.0,1.0,1.0 +197,Rostral linear nucleus raphe,255,166,255,1.0,1.0,1.0 +591,Central linear nucleus raphe,255,166,255,1.0,1.0,1.0 +872,Dorsal nucleus raphe,255,166,255,1.0,1.0,1.0 +1065,Hindbrain,255,155,136,1.0,1.0,1.0 +771,Pons,255,155,136,1.0,1.0,1.0 +1132,"Pons, sensory related",255,174,111,1.0,1.0,1.0 +612,Nucleus of the lateral lemniscus,255,174,111,1.0,1.0,1.0 +82,"Nucleus of the lateral lemniscus, dorsal part",255,174,111,1.0,1.0,1.0 +90,"Nucleus of the lateral lemniscus, horizontal part",255,174,111,1.0,1.0,1.0 +99,"Nucleus of the lateral lemniscus, ventral part",255,174,111,1.0,1.0,1.0 +7,Principal sensory nucleus of the trigeminal,255,174,111,1.0,1.0,1.0 +867,Parabrachial nucleus,255,174,111,1.0,1.0,1.0 +123,Koelliker-Fuse subnucleus,255,174,111,1.0,1.0,1.0 +881,"Parabrachial nucleus, lateral division",255,174,111,1.0,1.0,1.0 +860,"Parabrachial nucleus, lateral division, central lateral part",255,174,111,1.0,1.0,1.0 +868,"Parabrachial nucleus, lateral division, dorsal lateral part",255,174,111,1.0,1.0,1.0 +875,"Parabrachial nucleus, lateral division, external lateral part",255,174,111,1.0,1.0,1.0 +883,"Parabrachial nucleus, lateral division, superior lateral part",255,174,111,1.0,1.0,1.0 +891,"Parabrachial nucleus, lateral division, ventral lateral part",255,174,111,1.0,1.0,1.0 +890,"Parabrachial nucleus, medial division",255,174,111,1.0,1.0,1.0 +899,"Parabrachial nucleus, medial division, external medial part",255,174,111,1.0,1.0,1.0 +915,"Parabrachial nucleus, medial division, medial medial part",255,174,111,1.0,1.0,1.0 +923,"Parabrachial nucleus, medial division, ventral medial part",255,174,111,1.0,1.0,1.0 +398,Superior olivary complex,255,174,111,1.0,1.0,1.0 +122,"Superior olivary complex, periolivary region",255,174,111,1.0,1.0,1.0 +105,"Superior olivary complex, medial part",255,174,111,1.0,1.0,1.0 +114,"Superior olivary complex, lateral part",255,174,111,1.0,1.0,1.0 +987,"Pons, motor related",255,186,134,1.0,1.0,1.0 +280,Barrington's nucleus,255,186,134,1.0,1.0,1.0 +880,Dorsal tegmental nucleus,255,186,134,1.0,1.0,1.0 +283,Lateral tegmental nucleus,255,186,134,1.0,1.0,1.0 +599626927,Posterodorsal tegmental nucleus,255,186,134,1.0,1.0,1.0 +898,Pontine central gray,255,186,134,1.0,1.0,1.0 +931,Pontine gray,255,186,134,1.0,1.0,1.0 +1093,"Pontine reticular nucleus, caudal part",255,186,134,1.0,1.0,1.0 +552,"Pontine reticular nucleus, ventral part",255,186,134,1.0,1.0,1.0 +318,Supragenual nucleus,255,186,134,1.0,1.0,1.0 +462,Superior salivatory nucleus,255,186,134,1.0,1.0,1.0 +534,Supratrigeminal nucleus,255,186,134,1.0,1.0,1.0 +574,Tegmental reticular nucleus,255,186,134,1.0,1.0,1.0 +621,Motor nucleus of trigeminal,255,186,134,1.0,1.0,1.0 +549009215,Peritrigeminal zone,255,186,134,1.0,1.0,1.0 +549009219,Accessory trigeminal nucleus,255,186,134,1.0,1.0,1.0 +549009223,Parvicellular motor 5 nucleus,255,186,134,1.0,1.0,1.0 +549009227,Intertrigeminal nucleus,255,186,134,1.0,1.0,1.0 +1117,"Pons, behavioral state related",255,195,149,1.0,1.0,1.0 +679,Superior central nucleus raphe,255,195,149,1.0,1.0,1.0 +137,"Superior central nucleus raphe, lateral part",255,195,149,1.0,1.0,1.0 +130,"Superior central nucleus raphe, medial part",255,195,149,1.0,1.0,1.0 +147,Locus ceruleus,255,195,149,1.0,1.0,1.0 +162,Laterodorsal tegmental nucleus,255,195,149,1.0,1.0,1.0 +604,Nucleus incertus,255,195,149,1.0,1.0,1.0 +146,Pontine reticular nucleus,255,195,149,1.0,1.0,1.0 +238,Nucleus raphe pontis,255,195,149,1.0,1.0,1.0 +350,Subceruleus nucleus,255,195,149,1.0,1.0,1.0 +358,Sublaterodorsal nucleus,255,195,149,1.0,1.0,1.0 +354,Medulla,255,155,205,1.0,1.0,1.0 +386,"Medulla, sensory related",255,165,210,1.0,1.0,1.0 +207,Area postrema,255,165,210,1.0,1.0,1.0 +607,Cochlear nuclei,255,165,210,1.0,1.0,1.0 +112,Granular lamina of the cochlear nuclei,255,165,210,1.0,1.0,1.0 +560,"Cochlear nucleus, subpedunclular granular region",255,165,210,1.0,1.0,1.0 +96,Dorsal cochlear nucleus,255,165,210,1.0,1.0,1.0 +101,Ventral cochlear nucleus,255,165,210,1.0,1.0,1.0 +720,Dorsal column nuclei,255,165,210,1.0,1.0,1.0 +711,Cuneate nucleus,255,165,210,1.0,1.0,1.0 +1039,Gracile nucleus,255,165,210,1.0,1.0,1.0 +903,External cuneate nucleus,255,165,210,1.0,1.0,1.0 +642,Nucleus of the trapezoid body,255,165,210,1.0,1.0,1.0 +651,Nucleus of the solitary tract,255,165,210,1.0,1.0,1.0 +659,"Nucleus of the solitary tract, central part",255,165,210,1.0,1.0,1.0 +666,"Nucleus of the solitary tract, commissural part",255,165,210,1.0,1.0,1.0 +674,"Nucleus of the solitary tract, gelatinous part",255,165,210,1.0,1.0,1.0 +682,"Nucleus of the solitary tract, lateral part",255,165,210,1.0,1.0,1.0 +691,"Nucleus of the solitary tract, medial part",255,165,210,1.0,1.0,1.0 +429,"Spinal nucleus of the trigeminal, caudal part",255,165,210,1.0,1.0,1.0 +437,"Spinal nucleus of the trigeminal, interpolar part",255,165,210,1.0,1.0,1.0 +445,"Spinal nucleus of the trigeminal, oral part",255,165,210,1.0,1.0,1.0 +77,"Spinal nucleus of the trigeminal, oral part, caudal dorsomedial part",255,165,210,1.0,1.0,1.0 +53,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, dorsal zone",255,165,210,1.0,1.0,1.0 +61,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone",255,165,210,1.0,1.0,1.0 +45,"Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part",255,165,210,1.0,1.0,1.0 +69,"Spinal nucleus of the trigeminal, oral part, ventrolateral part",255,165,210,1.0,1.0,1.0 +589508451,Paratrigeminal nucleus,255,165,210,1.0,1.0,1.0 +789,Nucleus z,255,165,210,1.0,1.0,1.0 +370,"Medulla, motor related",255,179,217,1.0,1.0,1.0 +653,Abducens nucleus,255,179,217,1.0,1.0,1.0 +568,Accessory abducens nucleus,255,179,217,1.0,1.0,1.0 +661,Facial motor nucleus,255,179,217,1.0,1.0,1.0 +576,Accessory facial motor nucleus,255,179,217,1.0,1.0,1.0 +640,Efferent vestibular nucleus,255,179,217,1.0,1.0,1.0 +135,Nucleus ambiguus,255,179,217,1.0,1.0,1.0 +939,"Nucleus ambiguus, dorsal division",255,179,217,1.0,1.0,1.0 +143,"Nucleus ambiguus, ventral division",255,179,217,1.0,1.0,1.0 +839,Dorsal motor nucleus of the vagus nerve,255,179,217,1.0,1.0,1.0 +887,Efferent cochlear group,255,179,217,1.0,1.0,1.0 +1048,Gigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0 +372,Infracerebellar nucleus,255,179,217,1.0,1.0,1.0 +83,Inferior olivary complex,255,179,217,1.0,1.0,1.0 +136,Intermediate reticular nucleus,255,179,217,1.0,1.0,1.0 +106,Inferior salivatory nucleus,255,179,217,1.0,1.0,1.0 +203,Linear nucleus of the medulla,255,179,217,1.0,1.0,1.0 +235,Lateral reticular nucleus,255,179,217,1.0,1.0,1.0 +955,"Lateral reticular nucleus, magnocellular part",255,179,217,1.0,1.0,1.0 +963,"Lateral reticular nucleus, parvicellular part",255,179,217,1.0,1.0,1.0 +307,Magnocellular reticular nucleus,255,179,217,1.0,1.0,1.0 +395,Medullary reticular nucleus,255,179,217,1.0,1.0,1.0 +1098,"Medullary reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0 +1107,"Medullary reticular nucleus, ventral part",255,179,217,1.0,1.0,1.0 +852,Parvicellular reticular nucleus,255,179,217,1.0,1.0,1.0 +859,Parasolitary nucleus,255,179,217,1.0,1.0,1.0 +938,Paragigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0 +970,"Paragigantocellular reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0 +978,"Paragigantocellular reticular nucleus, lateral part",255,179,217,1.0,1.0,1.0 +154,Perihypoglossal nuclei,255,179,217,1.0,1.0,1.0 +161,Nucleus intercalatus,255,179,217,1.0,1.0,1.0 +177,Nucleus of Roller,255,179,217,1.0,1.0,1.0 +169,Nucleus prepositus,255,179,217,1.0,1.0,1.0 +995,Paramedian reticular nucleus,255,179,217,1.0,1.0,1.0 +1069,Parapyramidal nucleus,255,179,217,1.0,1.0,1.0 +185,"Parapyramidal nucleus, deep part",255,179,217,1.0,1.0,1.0 +193,"Parapyramidal nucleus, superficial part",255,179,217,1.0,1.0,1.0 +701,Vestibular nuclei,255,179,217,1.0,1.0,1.0 +209,Lateral vestibular nucleus,255,179,217,1.0,1.0,1.0 +202,Medial vestibular nucleus,255,179,217,1.0,1.0,1.0 +225,Spinal vestibular nucleus,255,179,217,1.0,1.0,1.0 +217,Superior vestibular nucleus,255,179,217,1.0,1.0,1.0 +765,Nucleus x,255,179,217,1.0,1.0,1.0 +773,Hypoglossal nucleus,255,179,217,1.0,1.0,1.0 +781,Nucleus y,255,179,217,1.0,1.0,1.0 +76,Interstitial nucleus of the vestibular nerve,255,179,217,1.0,1.0,1.0 +379,"Medulla, behavioral state related",255,198,226,1.0,1.0,1.0 +206,Nucleus raphe magnus,255,198,226,1.0,1.0,1.0 +230,Nucleus raphe pallidus,255,198,226,1.0,1.0,1.0 +222,Nucleus raphe obscurus,255,198,226,1.0,1.0,1.0 +512,Cerebellum,240,240,128,1.0,1.0,1.0 +528,Cerebellar cortex,240,240,128,1.0,1.0,1.0 +1144,"Cerebellar cortex, molecular layer",255,252,145,1.0,1.0,1.0 +1145,"Cerebellar cortex, Purkinje layer",255,252,145,1.0,1.0,1.0 +1143,"Cerebellar cortex, granular layer",236,231,84,1.0,1.0,1.0 +645,Vermal regions,255,252,145,1.0,1.0,1.0 +912,Lingula (I),255,252,145,1.0,1.0,1.0 +10707,"Lingula (I), molecular layer",255,252,145,1.0,1.0,1.0 +10706,"Lingula (I), Purkinje layer",255,252,145,1.0,1.0,1.0 +10705,"Lingula (I), granular layer",236,231,84,1.0,1.0,1.0 +920,Central lobule,255,252,145,1.0,1.0,1.0 +976,Lobule II,255,252,145,1.0,1.0,1.0 +10710,"Lobule II, molecular layer",255,252,145,1.0,1.0,1.0 +10709,"Lobule II, Purkinje layer",255,252,145,1.0,1.0,1.0 +10708,"Lobule II, granular layer",236,231,84,1.0,1.0,1.0 +984,Lobule III,255,252,145,1.0,1.0,1.0 +10713,"Lobule III, molecular layer",255,252,145,1.0,1.0,1.0 +10712,"Lobule III, Purkinje layer",255,252,145,1.0,1.0,1.0 +10711,"Lobule III, granular layer",236,231,84,1.0,1.0,1.0 +928,Culmen,255,252,145,1.0,1.0,1.0 +992,Lobule IV,255,252,145,1.0,1.0,1.0 +10716,"Lobule IV, molecular layer",255,252,145,1.0,1.0,1.0 +10715,"Lobule IV, Purkinje layer",255,252,145,1.0,1.0,1.0 +10714,"Lobule IV, granular layer",236,231,84,1.0,1.0,1.0 +1001,Lobule V,255,252,145,1.0,1.0,1.0 +10719,"Lobule V, molecular layer",255,252,145,1.0,1.0,1.0 +10718,"Lobule V, Purkinje layer",255,252,145,1.0,1.0,1.0 +10717,"Lobule V, granular layer",236,231,84,1.0,1.0,1.0 +1091,Lobules IV-V,255,252,145,1.0,1.0,1.0 +10722,"Lobules IV-V, molecular layer",255,252,145,1.0,1.0,1.0 +10721,"Lobules IV-V, Purkinje layer",255,252,145,1.0,1.0,1.0 +10720,"Lobules IV-V, granular layer",236,231,84,1.0,1.0,1.0 +936,Declive (VI),255,252,145,1.0,1.0,1.0 +10725,"Declive (VI), molecular layer",255,252,145,1.0,1.0,1.0 +10724,"Declive (VI), Purkinje layer",255,252,145,1.0,1.0,1.0 +10723,"Declive (VI), granular layer",236,231,84,1.0,1.0,1.0 +944,Folium-tuber vermis (VII),255,252,145,1.0,1.0,1.0 +10728,"Folium-tuber vermis (VII), molecular layer",255,252,145,1.0,1.0,1.0 +10727,"Folium-tuber vermis (VII), Purkinje layer",255,252,145,1.0,1.0,1.0 +10726,"Folium-tuber vermis (VII), granular layer",236,231,84,1.0,1.0,1.0 +951,Pyramus (VIII),255,252,145,1.0,1.0,1.0 +10731,"Pyramus (VIII), molecular layer",255,252,145,1.0,1.0,1.0 +10730,"Pyramus (VIII), Purkinje layer",255,252,145,1.0,1.0,1.0 +10729,"Pyramus (VIII), granular layer",236,231,84,1.0,1.0,1.0 +957,Uvula (IX),255,252,145,1.0,1.0,1.0 +10734,"Uvula (IX), molecular layer",255,252,145,1.0,1.0,1.0 +10733,"Uvula (IX), Purkinje layer",255,252,145,1.0,1.0,1.0 +10732,"Uvula (IX), granular layer",236,231,84,1.0,1.0,1.0 +968,Nodulus (X),255,252,145,1.0,1.0,1.0 +10737,"Nodulus (X), molecular layer",255,252,145,1.0,1.0,1.0 +10736,"Nodulus (X), Purkinje layer",255,252,145,1.0,1.0,1.0 +10735,"Nodulus (X), granular layer",236,231,84,1.0,1.0,1.0 +1073,Hemispheric regions,255,252,145,1.0,1.0,1.0 +1007,Simple lobule,255,252,145,1.0,1.0,1.0 +10674,"Simple lobule, molecular layer",255,252,145,1.0,1.0,1.0 +10673,"Simple lobule, Purkinje layer",255,252,145,1.0,1.0,1.0 +10672,"Simple lobule, granular layer",236,231,84,1.0,1.0,1.0 +1017,Ansiform lobule,255,252,145,1.0,1.0,1.0 +1056,Crus 1,255,252,145,1.0,1.0,1.0 +10677,"Crus 1, molecular layer",255,252,145,1.0,1.0,1.0 +10676,"Crus 1, Purkinje layer",255,252,145,1.0,1.0,1.0 +10675,"Crus 1, granular layer",236,231,84,1.0,1.0,1.0 +1064,Crus 2,255,252,145,1.0,1.0,1.0 +10680,"Crus 2, molecular layer",255,252,145,1.0,1.0,1.0 +10679,"Crus 2, Purkinje layer",255,252,145,1.0,1.0,1.0 +10678,"Crus 2, granular layer",236,231,84,1.0,1.0,1.0 +1025,Paramedian lobule,255,252,145,1.0,1.0,1.0 +10683,"Paramedian lobule, molecular layer",255,252,145,1.0,1.0,1.0 +10682,"Paramedian lobule, Purkinje layer",255,252,145,1.0,1.0,1.0 +10681,"Paramedian lobule, granular layer",236,231,84,1.0,1.0,1.0 +1033,Copula pyramidis,255,252,145,1.0,1.0,1.0 +10686,"Copula pyramidis, molecular layer",255,252,145,1.0,1.0,1.0 +10685,"Copula pyramidis, Purkinje layer",255,252,145,1.0,1.0,1.0 +10684,"Copula pyramidis, granular layer",236,231,84,1.0,1.0,1.0 +1041,Paraflocculus,255,252,145,1.0,1.0,1.0 +10689,"Paraflocculus, molecular layer",255,252,145,1.0,1.0,1.0 +10688,"Paraflocculus, Purkinje layer",255,252,145,1.0,1.0,1.0 +10687,"Paraflocculus, granular layer",236,231,84,1.0,1.0,1.0 +1049,Flocculus,255,252,145,1.0,1.0,1.0 +10692,"Flocculus, molecular layer",255,252,145,1.0,1.0,1.0 +10691,"Flocculus, Purkinje layer",255,252,145,1.0,1.0,1.0 +10690,"Flocculus, granular layer",236,231,84,1.0,1.0,1.0 +519,Cerebellar nuclei,240,240,128,1.0,1.0,1.0 +989,Fastigial nucleus,255,253,188,1.0,1.0,1.0 +91,Interposed nucleus,255,253,188,1.0,1.0,1.0 +846,Dentate nucleus,255,253,188,1.0,1.0,1.0 +589508455,Vestibulocerebellar nucleus,255,253,188,1.0,1.0,1.0 +1009,fiber tracts,204,204,204,1.0,1.0,1.0 +967,cranial nerves,204,204,204,1.0,1.0,1.0 +885,terminal nerve,204,204,204,1.0,1.0,1.0 +949,vomeronasal nerve,204,204,204,1.0,1.0,1.0 +840,olfactory nerve,204,204,204,1.0,1.0,1.0 +1016,olfactory nerve layer of main olfactory bulb,204,204,204,1.0,1.0,1.0 +21,"lateral olfactory tract, general",204,204,204,1.0,1.0,1.0 +665,"lateral olfactory tract, body",204,204,204,1.0,1.0,1.0 +538,dorsal limb,204,204,204,1.0,1.0,1.0 +459,accessory olfactory tract,204,204,204,1.0,1.0,1.0 +900,"anterior commissure, olfactory limb",204,204,204,1.0,1.0,1.0 +848,optic nerve,204,204,204,1.0,1.0,1.0 +876,accessory optic tract,204,204,204,1.0,1.0,1.0 +916,brachium of the superior colliculus,204,204,204,1.0,1.0,1.0 +336,superior colliculus commissure,204,204,204,1.0,1.0,1.0 +117,optic chiasm,204,204,204,1.0,1.0,1.0 +125,optic tract,204,204,204,1.0,1.0,1.0 +357,tectothalamic pathway,204,204,204,1.0,1.0,1.0 +832,oculomotor nerve,204,204,204,1.0,1.0,1.0 +62,medial longitudinal fascicle,204,204,204,1.0,1.0,1.0 +158,posterior commissure,204,204,204,1.0,1.0,1.0 +911,trochlear nerve,204,204,204,1.0,1.0,1.0 +384,trochlear nerve decussation,204,204,204,1.0,1.0,1.0 +710,abducens nerve,204,204,204,1.0,1.0,1.0 +901,trigeminal nerve,204,204,204,1.0,1.0,1.0 +93,motor root of the trigeminal nerve,204,204,204,1.0,1.0,1.0 +229,sensory root of the trigeminal nerve,204,204,204,1.0,1.0,1.0 +705,midbrain tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0 +794,spinal tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0 +798,facial nerve,204,204,204,1.0,1.0,1.0 +1131,intermediate nerve,204,204,204,1.0,1.0,1.0 +1116,genu of the facial nerve,204,204,204,1.0,1.0,1.0 +933,vestibulocochlear nerve,204,204,204,1.0,1.0,1.0 +1076,efferent cochleovestibular bundle,204,204,204,1.0,1.0,1.0 +413,vestibular nerve,204,204,204,1.0,1.0,1.0 +948,cochlear nerve,204,204,204,1.0,1.0,1.0 +841,trapezoid body,204,204,204,1.0,1.0,1.0 +641,intermediate acoustic stria,204,204,204,1.0,1.0,1.0 +506,dorsal acoustic stria,204,204,204,1.0,1.0,1.0 +658,lateral lemniscus,204,204,204,1.0,1.0,1.0 +633,inferior colliculus commissure,204,204,204,1.0,1.0,1.0 +482,brachium of the inferior colliculus,204,204,204,1.0,1.0,1.0 +808,glossopharyngeal nerve,204,204,204,1.0,1.0,1.0 +917,vagus nerve,204,204,204,1.0,1.0,1.0 +237,solitary tract,204,204,204,1.0,1.0,1.0 +717,accessory spinal nerve,204,204,204,1.0,1.0,1.0 +813,hypoglossal nerve,204,204,204,1.0,1.0,1.0 +925,ventral roots,204,204,204,1.0,1.0,1.0 +792,dorsal roots,204,204,204,1.0,1.0,1.0 +932,cervicothalamic tract,204,204,204,1.0,1.0,1.0 +570,dorsolateral fascicle,204,204,204,1.0,1.0,1.0 +522,dorsal commissure of the spinal cord,204,204,204,1.0,1.0,1.0 +858,ventral commissure of the spinal cord,204,204,204,1.0,1.0,1.0 +586,fasciculus proprius,204,204,204,1.0,1.0,1.0 +514,dorsal column,204,204,204,1.0,1.0,1.0 +380,cuneate fascicle,204,204,204,1.0,1.0,1.0 +388,gracile fascicle,204,204,204,1.0,1.0,1.0 +396,internal arcuate fibers,204,204,204,1.0,1.0,1.0 +697,medial lemniscus,204,204,204,1.0,1.0,1.0 +871,spinothalamic tract,204,204,204,1.0,1.0,1.0 +29,lateral spinothalamic tract,204,204,204,1.0,1.0,1.0 +389,ventral spinothalamic tract,204,204,204,1.0,1.0,1.0 +245,spinocervical tract,204,204,204,1.0,1.0,1.0 +261,spino-olivary pathway,204,204,204,1.0,1.0,1.0 +270,spinoreticular pathway,204,204,204,1.0,1.0,1.0 +293,spinovestibular pathway,204,204,204,1.0,1.0,1.0 +277,spinotectal pathway,204,204,204,1.0,1.0,1.0 +253,spinohypothalamic pathway,204,204,204,1.0,1.0,1.0 +285,spinotelenchephalic pathway,204,204,204,1.0,1.0,1.0 +627,hypothalamohypophysial tract,204,204,204,1.0,1.0,1.0 +960,cerebellum related fiber tracts,204,204,204,1.0,1.0,1.0 +744,cerebellar commissure,204,204,204,1.0,1.0,1.0 +752,cerebellar peduncles,204,204,204,1.0,1.0,1.0 +326,superior cerebelar peduncles,204,204,204,1.0,1.0,1.0 +812,superior cerebellar peduncle decussation,204,204,204,1.0,1.0,1.0 +85,spinocerebellar tract,204,204,204,1.0,1.0,1.0 +850,uncinate fascicle,204,204,204,1.0,1.0,1.0 +866,ventral spinocerebellar tract,204,204,204,1.0,1.0,1.0 +78,middle cerebellar peduncle,204,204,204,1.0,1.0,1.0 +1123,inferior cerebellar peduncle,204,204,204,1.0,1.0,1.0 +553,dorsal spinocerebellar tract,204,204,204,1.0,1.0,1.0 +499,cuneocerebellar tract,204,204,204,1.0,1.0,1.0 +650,juxtarestiform body,204,204,204,1.0,1.0,1.0 +490,bulbocerebellar tract,204,204,204,1.0,1.0,1.0 +404,olivocerebellar tract,204,204,204,1.0,1.0,1.0 +410,reticulocerebellar tract,204,204,204,1.0,1.0,1.0 +373,trigeminocerebellar tract,204,204,204,1.0,1.0,1.0 +728,arbor vitae,204,204,204,1.0,1.0,1.0 +484682512,supra-callosal cerebral white matter,204,204,204,1.0,1.0,1.0 +983,lateral forebrain bundle system,204,204,204,1.0,1.0,1.0 +776,corpus callosum,204,204,204,1.0,1.0,1.0 +956,"corpus callosum, anterior forceps",204,204,204,1.0,1.0,1.0 +579,external capsule,204,204,204,1.0,1.0,1.0 +964,"corpus callosum, extreme capsule",204,204,204,1.0,1.0,1.0 +1108,genu of corpus callosum,204,204,204,1.0,1.0,1.0 +971,"corpus callosum, posterior forceps",204,204,204,1.0,1.0,1.0 +979,"corpus callosum, rostrum",204,204,204,1.0,1.0,1.0 +484682516,"corpus callosum, body",204,204,204,1.0,1.0,1.0 +986,"corpus callosum, splenium",204,204,204,1.0,1.0,1.0 +784,corticospinal tract,204,204,204,1.0,1.0,1.0 +6,internal capsule,204,204,204,1.0,1.0,1.0 +924,cerebal peduncle,204,204,204,1.0,1.0,1.0 +1036,corticotectal tract,204,204,204,1.0,1.0,1.0 +1012,corticorubral tract,204,204,204,1.0,1.0,1.0 +1003,corticopontine tract,204,204,204,1.0,1.0,1.0 +994,corticobulbar tract,204,204,204,1.0,1.0,1.0 +190,pyramid,204,204,204,1.0,1.0,1.0 +198,pyramidal decussation,204,204,204,1.0,1.0,1.0 +1019,"corticospinal tract, crossed",204,204,204,1.0,1.0,1.0 +1028,"corticospinal tract, uncrossed",204,204,204,1.0,1.0,1.0 +896,thalamus related,204,204,204,1.0,1.0,1.0 +1092,external medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0 +14,internal medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0 +86,middle thalamic commissure,204,204,204,1.0,1.0,1.0 +365,thalamic peduncles,204,204,204,1.0,1.0,1.0 +484682520,optic radiation,204,204,204,1.0,1.0,1.0 +484682524,auditory radiation,204,204,204,1.0,1.0,1.0 +1000,extrapyramidal fiber systems,204,204,204,1.0,1.0,1.0 +760,cerebral nuclei related,204,204,204,1.0,1.0,1.0 +142,pallidothalamic pathway,204,204,204,1.0,1.0,1.0 +102,nigrostriatal tract,204,204,204,1.0,1.0,1.0 +109,nigrothalamic fibers,204,204,204,1.0,1.0,1.0 +134,pallidotegmental fascicle,204,204,204,1.0,1.0,1.0 +309,striatonigral pathway,204,204,204,1.0,1.0,1.0 +317,subthalamic fascicle,204,204,204,1.0,1.0,1.0 +877,tectospinal pathway,204,204,204,1.0,1.0,1.0 +1051,direct tectospinal pathway,204,204,204,1.0,1.0,1.0 +1060,doral tegmental decussation,204,204,204,1.0,1.0,1.0 +1043,crossed tectospinal pathway,204,204,204,1.0,1.0,1.0 +863,rubrospinal tract,204,204,204,1.0,1.0,1.0 +397,ventral tegmental decussation,204,204,204,1.0,1.0,1.0 +221,rubroreticular tract,204,204,204,1.0,1.0,1.0 +736,central tegmental bundle,204,204,204,1.0,1.0,1.0 +855,retriculospinal tract,204,204,204,1.0,1.0,1.0 +205,"retriculospinal tract, lateral part",204,204,204,1.0,1.0,1.0 +213,"retriculospinal tract, medial part",204,204,204,1.0,1.0,1.0 +941,vestibulospinal pathway,204,204,204,1.0,1.0,1.0 +991,medial forebrain bundle system,204,204,204,1.0,1.0,1.0 +768,cerebrum related,204,204,204,1.0,1.0,1.0 +884,amygdalar capsule,204,204,204,1.0,1.0,1.0 +892,ansa peduncularis,204,204,204,1.0,1.0,1.0 +908,"anterior commissure, temporal limb",204,204,204,1.0,1.0,1.0 +940,cingulum bundle,204,204,204,1.0,1.0,1.0 +1099,fornix system,204,204,204,1.0,1.0,1.0 +466,alveus,204,204,204,1.0,1.0,1.0 +530,dorsal fornix,204,204,204,1.0,1.0,1.0 +603,fimbria,204,204,204,1.0,1.0,1.0 +745,"precommissural fornix, general",204,204,204,1.0,1.0,1.0 +420,precommissural fornix diagonal band,204,204,204,1.0,1.0,1.0 +737,postcommissural fornix,204,204,204,1.0,1.0,1.0 +428,medial corticohypothalamic tract,204,204,204,1.0,1.0,1.0 +436,columns of the fornix,204,204,204,1.0,1.0,1.0 +618,hippocampal commissures,204,204,204,1.0,1.0,1.0 +443,dorsal hippocampal commissure,204,204,204,1.0,1.0,1.0 +449,ventral hippocampal commissure,204,204,204,1.0,1.0,1.0 +713,perforant path,204,204,204,1.0,1.0,1.0 +474,angular path,204,204,204,1.0,1.0,1.0 +37,longitudinal association bundle,204,204,204,1.0,1.0,1.0 +301,stria terminalis,204,204,204,1.0,1.0,1.0 +484682528,commissural branch of stria terminalis,204,204,204,1.0,1.0,1.0 +824,hypothalamus related,204,204,204,1.0,1.0,1.0 +54,medial forebrain bundle,204,204,204,1.0,1.0,1.0 +405,ventrolateral hypothalamic tract,204,204,204,1.0,1.0,1.0 +174,preoptic commissure,204,204,204,1.0,1.0,1.0 +349,supraoptic commissures,204,204,204,1.0,1.0,1.0 +817,"supraoptic commissures, anterior",204,204,204,1.0,1.0,1.0 +825,"supraoptic commissures, dorsal",204,204,204,1.0,1.0,1.0 +833,"supraoptic commissures, ventral",204,204,204,1.0,1.0,1.0 +166,premammillary commissure,204,204,204,1.0,1.0,1.0 +341,supramammillary decussation,204,204,204,1.0,1.0,1.0 +182,propriohypothalamic pathways,204,204,204,1.0,1.0,1.0 +762,"propriohypothalamic pathways, dorsal",204,204,204,1.0,1.0,1.0 +770,"propriohypothalamic pathways, lateral",204,204,204,1.0,1.0,1.0 +779,"propriohypothalamic pathways, medial",204,204,204,1.0,1.0,1.0 +787,"propriohypothalamic pathways, ventral",204,204,204,1.0,1.0,1.0 +150,periventricular bundle of the hypothalamus,204,204,204,1.0,1.0,1.0 +46,mammillary related,204,204,204,1.0,1.0,1.0 +753,principal mammillary tract,204,204,204,1.0,1.0,1.0 +690,mammillothalamic tract,204,204,204,1.0,1.0,1.0 +681,mammillotegmental tract,204,204,204,1.0,1.0,1.0 +673,mammillary peduncle,204,204,204,1.0,1.0,1.0 +1068,dorsal thalamus related,204,204,204,1.0,1.0,1.0 +722,periventricular bundle of the thalamus,204,204,204,1.0,1.0,1.0 +1083,epithalamus related,204,204,204,1.0,1.0,1.0 +802,stria medullaris,204,204,204,1.0,1.0,1.0 +595,fasciculus retroflexus,204,204,204,1.0,1.0,1.0 +611,habenular commissure,204,204,204,1.0,1.0,1.0 +730,pineal stalk,204,204,204,1.0,1.0,1.0 +70,midbrain related,204,204,204,1.0,1.0,1.0 +547,dorsal longitudinal fascicle,204,204,204,1.0,1.0,1.0 +563,dorsal tegmental tract,204,204,204,1.0,1.0,1.0 +73,ventricular systems,170,170,170,1.0,1.0,1.0 +81,lateral ventricle,170,170,170,1.0,1.0,1.0 +89,rhinocele,170,170,170,1.0,1.0,1.0 +98,subependymal zone,170,170,170,1.0,1.0,1.0 +108,choroid plexus,170,170,170,1.0,1.0,1.0 +116,choroid fissure,170,170,170,1.0,1.0,1.0 +124,interventricular foramen,170,170,170,1.0,1.0,1.0 +129,third ventricle,170,170,170,1.0,1.0,1.0 +140,cerebral aqueduct,170,170,170,1.0,1.0,1.0 +145,fourth ventricle,170,170,170,1.0,1.0,1.0 +153,lateral recess,170,170,170,1.0,1.0,1.0 +164,"central canal, spinal cord/medulla",170,170,170,1.0,1.0,1.0 +1024,grooves,170,170,170,1.0,1.0,1.0 +1032,grooves of the cerebral cortex,170,170,170,1.0,1.0,1.0 +1055,endorhinal groove,170,170,170,1.0,1.0,1.0 +1063,hippocampal fissure,170,170,170,1.0,1.0,1.0 +1071,rhinal fissure,170,170,170,1.0,1.0,1.0 +1078,rhinal incisure,170,170,170,1.0,1.0,1.0 +1040,grooves of the cerebellar cortex,170,170,170,1.0,1.0,1.0 +1087,precentral fissure,170,170,170,1.0,1.0,1.0 +1095,preculminate fissure,170,170,170,1.0,1.0,1.0 +1103,primary fissure,170,170,170,1.0,1.0,1.0 +1112,posterior superior fissure,170,170,170,1.0,1.0,1.0 +1119,prepyramidal fissure,170,170,170,1.0,1.0,1.0 +3,secondary fissure,170,170,170,1.0,1.0,1.0 +11,posterolateral fissure,170,170,170,1.0,1.0,1.0 +18,nodular fissure,170,170,170,1.0,1.0,1.0 +25,simple fissure,170,170,170,1.0,1.0,1.0 +34,intercrural fissure,170,170,170,1.0,1.0,1.0 +43,ansoparamedian fissure,170,170,170,1.0,1.0,1.0 +49,intraparafloccular fissure,170,170,170,1.0,1.0,1.0 +57,paramedian sulcus,170,170,170,1.0,1.0,1.0 +65,parafloccular sulcus,170,170,170,1.0,1.0,1.0 +624,Interpeduncular fossa,170,170,170,1.0,1.0,1.0 +304325711,retina,127,46,126,1.0,1.0,1.0 diff --git a/messing_around_files/testing_openflatfile.py b/messing_around_files/testing_openflatfile.py index 183e403e213e8a6754851414b08f634325c79d2b..1b076bac733d8eab0f14ca1cd27879730a22992e 100644 --- a/messing_around_files/testing_openflatfile.py +++ b/messing_around_files/testing_openflatfile.py @@ -38,7 +38,7 @@ with open(base, "rb") as f: """assign label file values into image array""" -labelfile = pd.read_csv(r"metadata/annotation_volumes\allen2017_colours.csv") +labelfile = pd.read_csv(r"annotation_volumes\allen2017_colours.csv") #labelfile[] print(list(zip(val,count))) diff --git a/testOOP.py b/testOOP.py index e4256a0a1af024534bcc152da2f901bb24b1de5e..c5e24774619e051678bac2ca544dc37ee2438b90 100644 --- a/testOOP.py +++ b/testOOP.py @@ -9,3 +9,6 @@ pnt.get_coordinates(object_cutoff=0) pnt.quantify_coordinates() pnt.save_analysis("outputs/test8_PyNutil") + +# remove name, r, g, b, from pixel_ +# add to region_areas df \ No newline at end of file diff --git a/test_data/PyTest_seg/flat_files/test_s001_nl.flat b/test_data/PyTest_seg/flat_files/test_s001_nl.flat new file mode 100644 index 0000000000000000000000000000000000000000..e82b1e4b1019ffa83475844787dc639b2bbaa83f Binary files /dev/null and b/test_data/PyTest_seg/flat_files/test_s001_nl.flat differ diff --git a/test_data/PyTest_seg/flat_files/test_s001_nl.png b/test_data/PyTest_seg/flat_files/test_s001_nl.png new file mode 100644 index 0000000000000000000000000000000000000000..b29e104e0c9760e86cddf9236e4ad4f0746d21dd Binary files /dev/null and b/test_data/PyTest_seg/flat_files/test_s001_nl.png differ diff --git a/test_data/PyTest_seg/flat_files/test_s001_nl_rbw.png b/test_data/PyTest_seg/flat_files/test_s001_nl_rbw.png new file mode 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