diff --git a/.vscode/settings.json b/.vscode/settings.json
new file mode 100644
index 0000000000000000000000000000000000000000..de288e1eab6a537caed290ce0fc5e70be7ae9dba
--- /dev/null
+++ b/.vscode/settings.json
@@ -0,0 +1,3 @@
+{
+ "python.formatting.provider": "black"
+}
\ No newline at end of file
diff --git a/PyNutil/__init__.py b/PyNutil/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..d06a3077d1205d56f14e9d13e7ed4c213b92891b
--- /dev/null
+++ b/PyNutil/__init__.py
@@ -0,0 +1 @@
+from .main import PyNutil
diff --git a/PyNutil/coordinate_extraction.py b/PyNutil/coordinate_extraction.py
index 95a11bab455699db1d0e963b5fc1a61e68d5ed33..5df3143f50ea3c8bf9a377e265fe9820b8879ba6 100644
--- a/PyNutil/coordinate_extraction.py
+++ b/PyNutil/coordinate_extraction.py
@@ -1,211 +1,249 @@
-
import numpy as np
import pandas as pd
from DeepSlice.coord_post_processing.spacing_and_indexing import number_sections
import json
-from read_and_write import loadVisuAlignJson
-from counting_and_load import labelPoints
-from visualign_deformations import triangulate, transform_vec
+from .read_and_write import load_visualign_json
+from .counting_and_load import label_points
+from .visualign_deformations import triangulate, transform_vec
from glob import glob
from tqdm import tqdm
import cv2
from skimage import measure
import threading
-#related to coordinate_extraction
-def getCentroidsAndArea(Segmentation, pixelCutOff=0):
- """this function returns the center coordinate of each object in the segmentation.
- You can set a pixelCutOff to remove objects that are smaller than that number of pixels"""
- SegmentationBinary = ~np.all(Segmentation==255, axis=2)
- labels = measure.label(SegmentationBinary)
- #this finds all the objects in the image
- labelsInfo = measure.regionprops(labels)
- #remove objects that are less than pixelCutOff
- labelsInfo = [label for label in labelsInfo if label.area > pixelCutOff]
- #get the centre points of the objects
- centroids = np.array([label.centroid for label in labelsInfo])
- #get the area of the objects
- area = np.array([label.area for label in labelsInfo])
- #get the coordinates for all the pixels in each object
- coords = np.array([label.coords for label in labelsInfo])
+
+# related to coordinate_extraction
+def get_centroids_and_area(segmentation, pixel_cut_off=0):
+ """This function returns the center coordinate of each object in the segmentation.
+ You can set a pixel_cut_off to remove objects that are smaller than that number of pixels.
+ """
+ labels = measure.label(segmentation)
+ # This finds all the objects in the image
+ labels_info = measure.regionprops(labels)
+
+ # Remove objects that are less than pixel_cut_off
+ labels_info = [label for label in labels_info if label.area > pixel_cut_off]
+ # Get the centre points of the objects
+ centroids = np.array([label.centroid for label in labels_info])
+ # Get the area of the objects
+ area = np.array([label.area for label in labels_info])
+ # Get the coordinates for all the pixels in each object
+ coords = np.array([label.coords for label in labels_info], dtype=object)
return centroids, area, coords
# related to coordinate extraction
-def transformToRegistration(SegHeight, SegWidth, RegHeight, RegWidth):
- """this function returns the scaling factors to transform the segmentation to the registration space"""
- Yscale = RegHeight/SegHeight
- Xscale = RegWidth/SegWidth
- return Yscale,Xscale
+def transform_to_registration(seg_height, seg_width, reg_height, reg_width):
+ """This function returns the scaling factors to transform the segmentation to the registration space."""
+ y_scale = reg_height / seg_height
+ x_scale = reg_width / seg_width
+ return y_scale, x_scale
# related to coordinate extraction
-def findMatchingPixels(Segmentation, id):
- """this function returns the Y and X coordinates of all the pixels in the segmentation that match the id provided"""
- mask = Segmentation==id
+def find_matching_pixels(segmentation, id):
+ """This function returns the Y and X coordinates of all the pixels in the segmentation that match the id provided."""
+ mask = segmentation == id
mask = np.all(mask, axis=2)
id_positions = np.where(mask)
- idY, idX = id_positions[0], id_positions[1]
- return idY,idX
-
-
-#related to coordinate extraction
-def scalePositions(idY, idX, Yscale, Xscale):
- """this function scales the Y and X coordinates to the registration space.
- (the Yscale and Xscale are the output of transformToRegistration)"""
- idY = idY * Yscale
- idX = idX * Xscale
- return idY,idX
-
-
-#related to coordinate extraction
-def transformToAtlasSpace(anchoring, Y, X, RegHeight, RegWidth):
- """transform to atlas space using the QuickNII anchoring vector"""
- O = anchoring[0:3]
- U = anchoring[3:6]
- # swap order of U
- U = np.array([U[0], U[1], U[2]])
- V = anchoring[6:9]
- # swap order of V
- V = np.array([V[0], V[1], V[2]])
- #scale X and Y to between 0 and 1 using the registration width and height
- Yscale = Y/RegHeight
- Xscale = X/RegWidth
- # print("width: ", RegWidth, " height: ", RegHeight, " Xmax: ", np.max(X), " Ymax: ", np.max(Y), " Xscale: ", np.max(Xscale), " Yscale: ", np.max(Yscale))
- XYZV = np.array([Yscale*V[0], Yscale*V[1], Yscale*V[2]])
- XYZU = np.array([Xscale*U[0], Xscale*U[1], Xscale*U[2]])
- O = np.reshape(O, (3,1))
- return (O+XYZU+XYZV).T
+ id_y, id_x = id_positions[0], id_positions[1]
+ return id_y, id_x
# related to coordinate extraction
-def SegmentationToAtlasSpace(slice, SegmentationPath, pixelID='auto', nonLinear=True):
- """combines many functions to convert a segmentation to atlas space. It takes care
- of deformations"""
- Segmentation = cv2.imread(SegmentationPath)
-
- if pixelID == 'auto':
- #remove the background from the segmentation
- SegmentationNoBackGround = Segmentation[~np.all(Segmentation==255, axis=2)]
- pixelID = np.vstack({tuple(r) for r in SegmentationNoBackGround.reshape(-1,3)})#remove background
- #currently only works for a single label
- pixelID = pixelID[0]
- ID_pixels = findMatchingPixels(Segmentation, pixelID)
- #transform pixels to registration space (the registered image and segmentation have different dimensions)
- SegHeight = Segmentation.shape[0]
- SegWidth = Segmentation.shape[1]
- RegHeight = slice["height"]
- RegWidth = slice["width"]
- #this calculates reg/seg
- Yscale , Xscale = transformToRegistration(SegHeight,SegWidth, RegHeight,RegWidth)
- scaledY,scaledX = scalePositions(ID_pixels[0], ID_pixels[1], Yscale, Xscale)
- if nonLinear:
- if "markers" in slice:
- #this creates a triangulation using the reg width
- triangulation = triangulate(RegWidth, RegHeight, slice["markers"])
- newX, newY = transform_vec(triangulation, scaledX, scaledY)
- else:
- print(f"no markers found for " + slice["filename"])
- newX, newY = scaledX, scaledY
- else:
- newX, newY = scaledX, scaledY
+def scale_positions(id_y, id_x, y_scale, x_scale):
+ """This function scales the Y and X coordinates to the registration space.
+ (The y_scale and x_scale are the output of transform_to_registration.)
+ """
+ id_y = id_y * y_scale
+ id_x = id_x * x_scale
+ return id_y, id_x
- #scale U by Uxyz/RegWidth and V by Vxyz/RegHeight
- points = transformToAtlasSpace(slice['anchoring'], newY, newX, RegHeight, RegWidth)
- # points = points.reshape(-1)
- return np.array(points)
+# related to coordinate extraction
+def transform_to_atlas_space(anchoring, y, x, reg_height, reg_width):
+ """Transform to atlas space using the QuickNII anchoring vector."""
+ o = anchoring[0:3]
+ u = anchoring[3:6]
+ # Swap order of U
+ u = np.array([u[0], u[1], u[2]])
+ v = anchoring[6:9]
+ # Swap order of V
+ v = np.array([v[0], v[1], v[2]])
+ # Scale X and Y to between 0 and 1 using the registration width and height
+ y_scale = y / reg_height
+ x_scale = x / reg_width
+ xyz_v = np.array([y_scale * v[0], y_scale * v[1], y_scale * v[2]])
+ xyz_u = np.array([x_scale * u[0], x_scale * u[1], x_scale * u[2]])
+ o = np.reshape(o, (3, 1))
+ return (o + xyz_u + xyz_v).T
+
+
+# points.append would make list of lists, keeping sections separate.
# related to coordinate extraction
-def FolderToAtlasSpace(folder, QUINT_alignment, pixelID=[0, 0, 0], nonLinear=True):
- "apply Segmentation to atlas space to all segmentations in a folder"
- slices = loadVisuAlignJson(QUINT_alignment)
- points = []
- segmentationFileTypes = [".png", ".tif", ".tiff", ".jpg", ".jpeg"]
- Segmentations = [file for file in glob(folder + "/*") if any([file.endswith(type) for type in segmentationFileTypes])]
- SectionNumbers = number_sections(Segmentations)
- #order segmentations and sectionNumbers
- # Segmentations = [x for _,x in sorted(zip(SectionNumbers,Segmentations))]
- # SectionNumbers.sort()
- for SegmentationPath in Segmentations:
- seg_nr = int(number_sections([SegmentationPath])[0])
- current_slice_index = np.where([s["nr"]==seg_nr for s in slices])
- current_slice = slices[current_slice_index[0][0]]
- ##this converts the segmentation to a point cloud
- points.extend(SegmentationToAtlasSpace(current_slice, SegmentationPath, pixelID, nonLinear))
- return np.array(points)
-
-# points.append would make list of lists, keeping sections separate.
-
-
-#related to coordinate extraction
-#this function returns an array of points
-def FolderToAtlasSpaceMultiThreaded(folder, QUINT_alignment, pixelID=[0, 0, 0], nonLinear=True):
- "apply Segmentation to atlas space to all segmentations in a folder"
- slices = loadVisuAlignJson(QUINT_alignment)
-
- segmentationFileTypes = [".png", ".tif", ".tiff", ".jpg", ".jpeg"]
- Segmentations = [file for file in glob(folder + "/*") if any([file.endswith(type) for type in segmentationFileTypes])]
- SectionNumbers = number_sections(Segmentations)
- #order segmentations and sectionNumbers
- # Segmentations = [x for _,x in sorted(zip(SectionNumbers,Segmentations))]
- # SectionNumbers.sort()
- pointsList = [None] * len(Segmentations)
+# This function returns an array of points
+def folder_to_atlas_space(
+ folder,
+ quint_alignment,
+ pixel_id=[0, 0, 0],
+ non_linear=True,
+ method="all",
+ object_cutoff=0,
+):
+ """Apply Segmentation to atlas space to all segmentations in a folder."""
+
+ # This should be loaded above and passed as an argument
+ slices = load_visualign_json(quint_alignment)
+
+ segmentation_file_types = [".png", ".tif", ".tiff", ".jpg", ".jpeg"]
+ segmentations = [
+ file
+ for file in glob(folder + "/*")
+ if any([file.endswith(type) for type in segmentation_file_types])
+ ]
+ # Order segmentations and section_numbers
+ # segmentations = [x for _,x in sorted(zip(section_numbers,segmentations))]
+ # section_numbers.sort()
+ points_list = [None] * len(segmentations)
+ centroids_list = [None] * len(segmentations)
threads = []
- for SegmentationPath, index in zip(Segmentations, range(len(Segmentations))):
- seg_nr = int(number_sections([SegmentationPath])[0])
- current_slice_index = np.where([s["nr"]==seg_nr for s in slices])
+ for segmentation_path, index in zip(segmentations, range(len(segmentations))):
+ seg_nr = int(number_sections([segmentation_path])[0])
+ current_slice_index = np.where([s["nr"] == seg_nr for s in slices])
current_slice = slices[current_slice_index[0][0]]
- x = threading.Thread(target=SegmentationToAtlasSpaceMultiThreaded, args=(current_slice, SegmentationPath, pixelID, nonLinear, pointsList, index))
+ x = threading.Thread(
+ target=segmentation_to_atlas_space,
+ args=(
+ current_slice,
+ segmentation_path,
+ pixel_id,
+ non_linear,
+ points_list,
+ centroids_list,
+ index,
+ method,
+ object_cutoff,
+ ),
+ )
threads.append(x)
- ##this converts the segmentation to a point cloud
- # start threads
+ ## This converts the segmentation to a point cloud
+ # Start threads
[t.start() for t in threads]
- # wait for threads to finish
+ # Wait for threads to finish
[t.join() for t in threads]
- # flatten pointsList
- points = [item for sublist in pointsList for item in sublist]
- return np.array(points)
-
-
-# related to coordinate extraction
-# this function returns an array of points
-def SegmentationToAtlasSpaceMultiThreaded(slice, SegmentationPath, pixelID='auto', nonLinear=True, pointsList=None, index=None):
- """combines many functions to convert a segmentation to atlas space. It takes care
- of deformations"""
- Segmentation = cv2.imread(SegmentationPath)
-
- if pixelID == 'auto':
- #remove the background from the segmentation
- SegmentationNoBackGround = Segmentation[~np.all(Segmentation==255, axis=2)]
- pixelID = np.vstack({tuple(r) for r in SegmentationNoBackGround.reshape(-1,3)})#remove background
- #currently only works for a single label
- pixelID = pixelID[0]
- ID_pixels = findMatchingPixels(Segmentation, pixelID)
- #transform pixels to registration space (the registered image and segmentation have different dimensions)
- SegHeight = Segmentation.shape[0]
- SegWidth = Segmentation.shape[1]
- RegHeight = slice["height"]
- RegWidth = slice["width"]
- #this calculates reg/seg
- Yscale , Xscale = transformToRegistration(SegHeight,SegWidth, RegHeight,RegWidth)
-
- #scale the seg coordinates to reg/seg
- scaledY,scaledX = scalePositions(ID_pixels[0], ID_pixels[1], Yscale, Xscale)
- if nonLinear:
+ # Flatten points_list
+
+ points_len = [len(points) for points in points_list]
+ centroids_len = [len(centroids) for centroids in centroids_list]
+ points = np.concatenate(points_list)
+ centroids = np.concatenate(centroids_list)
+
+ return (
+ np.array(points),
+ np.array(centroids),
+ points_len,
+ centroids_len,
+ segmentations,
+ )
+
+
+def segmentation_to_atlas_space(
+ slice,
+ segmentation_path,
+ pixel_id="auto",
+ non_linear=True,
+ points_list=None,
+ centroids_list=None,
+ index=None,
+ method="per_pixel",
+ object_cutoff=0,
+):
+ """Combines many functions to convert a segmentation to atlas space. It takes care
+ of deformations."""
+ segmentation = cv2.imread(segmentation_path)
+ if pixel_id == "auto":
+ # Remove the background from the segmentation
+ segmentation_no_background = segmentation[~np.all(segmentation == 255, axis=2)]
+ pixel_id = np.vstack(
+ {tuple(r) for r in segmentation_no_background.reshape(-1, 3)}
+ ) # Remove background
+ # Currently only works for a single label
+ pixel_id = pixel_id[0]
+
+ # Transform pixels to registration space (the registered image and segmentation have different dimensions)
+ seg_height = segmentation.shape[0]
+ seg_width = segmentation.shape[1]
+ reg_height = slice["height"]
+ reg_width = slice["width"]
+ # This calculates reg/seg
+ y_scale, x_scale = transform_to_registration(
+ seg_height, seg_width, reg_height, reg_width
+ )
+ centroids, points = None, None
+ if method in ["per_object", "all"]:
+ centroids, scaled_centroidsX, scaled_centroidsY = get_centroids(
+ segmentation, pixel_id, y_scale, x_scale, object_cutoff
+ )
+ if method in ["per_pixel", "all"]:
+ scaled_y, scaled_x = get_scaled_pixels(segmentation, pixel_id, y_scale, x_scale)
+
+ if non_linear:
if "markers" in slice:
- #this creates a triangulation using the reg width
- triangulation = triangulate(RegWidth, RegHeight, slice["markers"])
- newX, newY = transform_vec(triangulation, scaledX, scaledY)
+ # This creates a triangulation using the reg width
+ triangulation = triangulate(reg_width, reg_height, slice["markers"])
+ if method in ["per_pixel", "all"]:
+ new_x, new_y = transform_vec(triangulation, scaled_x, scaled_y)
+ if method in ["per_object", "all"]:
+ centroids_new_x, centroids_new_y = transform_vec(
+ triangulation, scaled_centroidsX, scaled_centroidsY
+ )
else:
- print(f"no markers found for " + slice["filename"])
- newX, newY = scaledX, scaledY
+ print(
+ f"No markers found for {slice['filename']}, result for section will be linear."
+ )
+ if method in ["per_pixel", "all"]:
+ new_x, new_y = scaled_x, scaled_y
+ if method in ["per_object", "all"]:
+ centroids_new_x, centroids_new_y = scaled_centroidsX, scaled_centroidsY
else:
- newX, newY = scaledX, scaledY
- #scale U by Uxyz/RegWidth and V by Vxyz/RegHeight
- points = transformToAtlasSpace(slice['anchoring'], newY, newX, RegHeight, RegWidth)
- # points = points.reshape(-1)
- pointsList[index] = np.array(points)
-
-
+ if method in ["per_pixel", "all"]:
+ new_x, new_y = scaled_x, scaled_y
+ if method in ["per_object", "all"]:
+ centroids_new_x, centroids_new_y = scaled_centroidsX, scaled_centroidsY
+ # Scale U by Uxyz/RegWidth and V by Vxyz/RegHeight
+ if method in ["per_pixel", "all"]:
+ points = transform_to_atlas_space(
+ slice["anchoring"], new_y, new_x, reg_height, reg_width
+ )
+ if method in ["per_object", "all"]:
+ centroids = transform_to_atlas_space(
+ slice["anchoring"], centroids_new_y, centroids_new_x, reg_height, reg_width
+ )
+ print(
+ f"Finished and points len is: {len(points)} and centroids len is: {len(centroids)}"
+ )
+ points_list[index] = np.array(points)
+ centroids_list[index] = np.array(centroids)
+
+
+def get_centroids(segmentation, pixel_id, y_scale, x_scale, object_cutoff=0):
+ binary_seg = segmentation == pixel_id
+ binary_seg = np.all(binary_seg, axis=2)
+ centroids, area, coords = get_centroids_and_area(
+ binary_seg, pixel_cut_off=object_cutoff
+ )
+ centroidsX = centroids[:, 1]
+ centroidsY = centroids[:, 0]
+ scaled_centroidsY, scaled_centroidsX = scale_positions(
+ centroidsY, centroidsX, y_scale, x_scale
+ )
+ return centroids, scaled_centroidsX, scaled_centroidsY
+
+
+def get_scaled_pixels(segmentation, pixel_id, y_scale, x_scale):
+ id_pixels = find_matching_pixels(segmentation, pixel_id)
+ # Scale the seg coordinates to reg/seg
+ scaled_y, scaled_x = scale_positions(id_pixels[0], id_pixels[1], y_scale, x_scale)
+ return scaled_y, scaled_x
diff --git a/PyNutil/counting_and_load.py b/PyNutil/counting_and_load.py
index 77f19a4607e59d6be394c59a16912a7a8b68e523..2c7b46eebe62b1716a674b0d7ea4022a906d56b7 100644
--- a/PyNutil/counting_and_load.py
+++ b/PyNutil/counting_and_load.py
@@ -2,85 +2,134 @@ import numpy as np
import pandas as pd
import struct
+
# related to counting and load
-def labelPoints(points, label_volume, scale_factor=1):
- """this function takes a list of points and assigns them to a region based on the regionVolume.
- These regions will just be the values in the regionVolume at the points.
- it returns a dictionary with the region as the key and the points as the value"""
- #first convert the points to 3 columns
- points = np.reshape(points, (-1,3))
- #scale the points
+def label_points(points, label_volume, scale_factor=1):
+ """This function takes a list of points and assigns them to a region based on the region_volume.
+ These regions will just be the values in the region_volume at the points.
+ It returns a dictionary with the region as the key and the points as the value."""
+ # First convert the points to 3 columns
+ points = np.reshape(points, (-1, 3))
+ # Scale the points
points = points * scale_factor
- #round the points to the nearest whole number
+ # Round the points to the nearest whole number
points = np.round(points).astype(int)
- x = points[:,0]
- y = points[:,1]
- z = points[:,2]
- #get the label value for each point
- labels = label_volume[x,y,z]
+ x = points[:, 0]
+ y = points[:, 1]
+ z = points[:, 2]
+
+ # make sure the points are within the volume
+ x[x < 0] = 0
+ y[y < 0] = 0
+ z[z < 0] = 0
+ mask = (
+ (x > label_volume.shape[0] - 1)
+ | (y > label_volume.shape[1] - 1)
+ | (z > label_volume.shape[2] - 1)
+ )
+ x[mask] = 0
+ y[mask] = 0
+ z[mask] = 0
+
+ # Get the label value for each point
+ labels = label_volume[x, y, z]
+
return labels
# related to counting_and_load
-def PixelCountPerRegion(labelsDict, label_colours):
- """Function for counting no. of pixels per region and writing to CSV based on
- a dictionary with the region as the key and the points as the value, """
- counted_labels, label_counts = np.unique(labelsDict, return_counts=True)
- # which regions have pixels, and how many pixels are there per region
- counts_per_label = list(zip(counted_labels,label_counts))
- # create a list of unique regions and pixel counts per region
-
- df_counts_per_label = pd.DataFrame(counts_per_label, columns=["idx","pixel_count"])
- # create a pandas df with regions and pixel counts
-
- df_label_colours =pd.read_csv(label_colours, sep=",")
- # find colours corresponding to each region ID and add to the pandas dataframe
-
- #look up name, r, g, b in df_allen_colours in df_counts_per_label based on "idx"
+def pixel_count_per_region(
+ labels_dict_points, labeled_dict_centroids, df_label_colours
+):
+ """Function for counting no. of pixels per region and writing to CSV based on
+ a dictionary with the region as the key and the points as the value."""
+ if labels_dict_points is not None and labeled_dict_centroids is not None:
+ counted_labels_points, label_counts_points = np.unique(
+ labels_dict_points, return_counts=True
+ )
+ counted_labels_centroids, label_counts_centroids = np.unique(
+ labeled_dict_centroids, return_counts=True
+ )
+ # Which regions have pixels, and how many pixels are there per region
+ counts_per_label = list(
+ zip(counted_labels_points, label_counts_points, label_counts_centroids)
+ )
+ # Create a list of unique regions and pixel counts per region
+ df_counts_per_label = pd.DataFrame(
+ counts_per_label, columns=["idx", "pixel_count", "object_count"]
+ )
+ elif labels_dict_points is None and labeled_dict_centroids is not None:
+ counted_labels_centroids, label_counts_centroids = np.unique(
+ labeled_dict_centroids, return_counts=True
+ )
+ # Which regions have pixels, and how many pixels are there per region
+ counts_per_label = list(zip(counted_labels_centroids, label_counts_centroids))
+ # Create a list of unique regions and pixel counts per region
+ df_counts_per_label = pd.DataFrame(
+ counts_per_label, columns=["idx", "object_count"]
+ )
+ elif labels_dict_points is not None and labeled_dict_centroids is None:
+ counted_labels_points, label_counts_points = np.unique(
+ labels_dict_points, return_counts=True
+ )
+ # Which regions have pixels, and how many pixels are there per region
+ counts_per_label = list(zip(counted_labels_points, label_counts_points))
+ # Create a list of unique regions and pixel counts per region
+ df_counts_per_label = pd.DataFrame(
+ counts_per_label, columns=["idx", "pixel_count"]
+ )
+ # Create a pandas df with regions and pixel counts
+
+ # df_label_colours = pd.read_csv(label_colours, sep=",")
+ # Find colours corresponding to each region ID and add to the pandas dataframe
+
+ # Look up name, r, g, b in df_allen_colours in df_counts_per_label based on "idx"
new_rows = []
for index, row in df_counts_per_label.iterrows():
- mask = df_label_colours["idx"] == row["idx"]
+ mask = df_label_colours["idx"] == row["idx"]
current_region_row = df_label_colours[mask]
current_region_name = current_region_row["name"].values
current_region_red = current_region_row["r"].values
current_region_green = current_region_row["g"].values
current_region_blue = current_region_row["b"].values
- row["name"] = current_region_name[0]
+ row["name"] = current_region_name[0]
row["r"] = current_region_red[0]
row["g"] = current_region_green[0]
row["b"] = current_region_blue[0]
-
+
new_rows.append(row)
df_counts_per_label_name = pd.DataFrame(new_rows)
return df_counts_per_label_name
-"""read flat file and write into an np array"""
-def flat_to_array(flatfile):
- with open(flatfile,"rb") as f:
- #i dont know what b is, w and h are the width and height that we get from the
- #flat file header
- b,w,h=struct.unpack(">BII",f.read(9))
- #data is a one dimensional list of values
- #it has the shape width times height
- data =struct.unpack(">"+("xBH"[b]*(w*h)),f.read(b*w*h))
+"""Read flat file and write into an np array"""
+
+
+def flat_to_array(flat_file):
+ with open(flat_file, "rb") as f:
+ # I don't know what b is, w and h are the width and height that we get from the
+ # flat file header
+ b, w, h = struct.unpack(">BII", f.read(9))
+ # Data is a one dimensional list of values
+ # It has the shape width times height
+ data = struct.unpack(">" + ("xBH"[b] * (w * h)), f.read(b * w * h))
- #convert flat file data into an array, previously data was a tuple
- imagedata = np.array(data)
+ # Convert flat file data into an array, previously data was a tuple
+ image_data = np.array(data)
- #create an empty image array in the right shape, write imagedata into image_array
- image = np.zeros((h,w))
+ # Create an empty image array in the right shape, write image_data into image_array
+ image = np.zeros((h, w))
for x in range(w):
for y in range(h):
- image[y,x] = imagedata[x+y*w]
+ image[y, x] = image_data[x + y * w]
image_arr = np.array(image)
return image_arr
-# import flat files, count pixels per label, np.unique... etc. nitrc.org/plugins/mwiki/index.php?title=visualign:Deformation
+# Import flat files, count pixels per label, np.unique... etc. nitrc.org/plugins/mwiki/index.php?title=visualign:Deformation
"""
base=slice["filename"][:-4]
diff --git a/PyNutil/dream_workflow.py b/PyNutil/dream_workflow.py
deleted file mode 100644
index 5f53d9eb732967c4cfc0a1619976e92ea5fa6c5d..0000000000000000000000000000000000000000
--- a/PyNutil/dream_workflow.py
+++ /dev/null
@@ -1,36 +0,0 @@
-import PyNutil
-
-#define parameters
-#specify loacation of segmentation folder
-segmentation_folder = r"blabla/blabla"
-#specify location of json file
-json_file = r"blabla/blabla.json"
-#specify colour to quantify
-colour = [255, 255, 255]
-#specify output location
-output_path = r"blabla/blabla/output"
-
-quantifier = PyNutil(segmentation_folder,
- json_file,
- colour,
- output_path)
-
-quantifier.build_quantifier()
-
-#define your mask as either a png, or a qcalign damage map
-#this mask will be applied to all
-quantifier.load_mask(mask_path=r"blablabla/")
-
-#load a custom region file
-quantifier.load_custom_regions(custom_region_json=r"blablabla/")
-#run coordinate extraction
-#ideally extract coordinates per section and whole brain
-points = quantifier.get_coordinates()
-
-quantifier.save_coordinates()
-
-objects = quantifier.get_objects()
-
-loads = quantifier.get_loads()
-
-quantifier.save_segmentation_atlas_overlays()
\ No newline at end of file
diff --git a/PyNutil/folder_of_segmentations_to_meshview.py b/PyNutil/folder_of_segmentations_to_meshview.py
deleted file mode 100644
index 82775778a7dba50eec2e9046073ee2b0cd6858de..0000000000000000000000000000000000000000
--- a/PyNutil/folder_of_segmentations_to_meshview.py
+++ /dev/null
@@ -1,90 +0,0 @@
-
-#pandas is used for working with csv files
-import pandas as pd
-#nrrd just lets us open nrrd files
-import nrrd
-import numpy as np
-import csv
-import json
-
-from datetime import datetime
-
-#import our function for converting a folder of segmentations to points
-from PyNutil import FolderToAtlasSpace, labelPoints, WritePointsToMeshview
-
-volume_path = "../annotation_volumes//annotation_10_reoriented.nrrd"
-data, header = nrrd.read(volume_path)
-
-startTime = datetime.now()
-
-segmentation_folder = "../test_data/ext-d000033_PVMouseExtraction_pub-Nutil_Quantifier_analysis-81264-Input_dir/"
-alignment_json = "../test_data/PVMouse_81264_nonlin.json"
-#now we can use our function to convert the folder of segmentations to points
-points = FolderToAtlasSpace(segmentation_folder,alignment_json, pixelID=[255, 0, 0], nonLinear=True)
-
-
-time_taken = datetime.now() - startTime
-
-print(f"Folder to atlas took: {time_taken}")
-#first we need to find the label file for the volume
-label_path = "../annotation_volumes//allen2022_colours.csv"
-#then the path to the volume
-
-#read the label files
-label_df = pd.read_csv(label_path)
-#read the annotation volume, it also has a header but we don't need it
-#now we can get the labels for each point
-labels = labelPoints(points, data, scale_factor=2.5)
-#save points to a meshview json
-WritePointsToMeshview(points, labels,"../outputs/points.json", label_df)
-
-#Task:
-# Make a pandas dataframe
-# Column 1: counted_labels
-# Column 2: label_counts
-# Column 3: region_name (look up by reading Allen2022_colours.csv, look up name and RGB)
-# Save dataframe in output as CSV
-# next task is to create functions from this.
-counted_labels, label_counts = np.unique(labels, return_counts=True)
-counts_per_label = list(zip(counted_labels,label_counts))
-
-df_counts_per_label = pd.DataFrame(counts_per_label, columns=["allenID","pixel count"])
-
-allen_colours = "../annotation_volumes//allen2022_colours.csv"
-
-df_allen_colours =pd.read_csv(allen_colours, sep=",")
-df_allen_colours
-
-#look up name, r, g, b in df_allen_colours in df_counts_per_label based on "allenID"
-new_rows = []
-for index, row in df_counts_per_label.iterrows():
- mask = df_allen_colours["allenID"] == row["allenID"]
- current_region_row = df_allen_colours[mask]
- current_region_name = current_region_row["name"].values
- current_region_red = current_region_row["r"].values
- current_region_green = current_region_row["g"].values
- current_region_blue = current_region_row["b"].values
-
- row["name"] = current_region_name[0]
- row["r"] = current_region_red[0]
- row["g"] = current_region_green[0]
- row["b"] = current_region_blue[0]
-
- new_rows.append(row)
-
-df_counts_per_label_name = pd.DataFrame(new_rows)
-df_counts_per_label_name
-
-# write to csv file
-df_counts_per_label_name.to_csv("../outputs/counts_per_allenID.csv", sep=";", na_rep='', index= False)
-
-#r = df_allen_colours["r"]
-#g = df_allen_colours["g"]
-#b = df_allen_colours["b"]
-#region_name = df_allen_colours["name"]
-
-#while we havent added it here it would be good to next quantify the number of cells for each label.
-
-time_taken = datetime.now() - startTime
-
-print(f"time taken was: {time_taken}")
\ No newline at end of file
diff --git a/PyNutil/folder_of_segmentations_to_meshview_multithreaded.py b/PyNutil/folder_of_segmentations_to_meshview_multithreaded.py
deleted file mode 100644
index f84c282ff8c22a4f954eb75c20cf76bf49eb5478..0000000000000000000000000000000000000000
--- a/PyNutil/folder_of_segmentations_to_meshview_multithreaded.py
+++ /dev/null
@@ -1,62 +0,0 @@
-
-#pandas is used for working with csv files
-import pandas as pd
-#nrrd just lets us open nrrd files
-import nrrd
-import numpy as np
-import csv
-import json
-
-from datetime import datetime
-
-#import json, use to define input parameters
-with open('../test/test5_NOP_s037.json', 'r') as f:
- input = json.load(f)
-#print(input)
-
-#import our function for converting a folder of segmentations to points
-from coordinate_extraction import FolderToAtlasSpace, FolderToAtlasSpaceMultiThreaded
-from read_and_write import SaveDataframeasCSV, WritePointsToMeshview, FilesinDirectory
-from counting_and_load import PixelCountPerRegion, labelPoints
-
-startTime = datetime.now()
-
-#now we can use our function to convert the folder of segmentations to points
-points = FolderToAtlasSpaceMultiThreaded(input["segmentation_folder"],input["alignment_json"], pixelID=input["colour"], nonLinear=input["nonlinear"])
-
-time_taken = datetime.now() - startTime
-print(f"Folder to atlas took: {time_taken}")
-#first we need to find the label file for the volume
-#then the path to the volume
-
-#read the label files
-label_df = pd.read_csv(input["label_path"])
-#read the annotation volume, it also has a header but we don't need it
-data, header = nrrd.read(input["volume_path"])
-#now we can get the labels for each point
-labels = labelPoints(points, data, scale_factor=2.5)
-
-#save points to a meshview jsonv
-WritePointsToMeshview(points, labels, input["points_json_path"], label_df)
-
-df_counts_per_label_name = PixelCountPerRegion(labels, input["label_path"])
-SaveDataframeasCSV(df_counts_per_label_name, input["counts_per_label_name"])
-
-time_taken = datetime.now() - startTime
-
-print(f"overall time taken was: {time_taken}")
-
-#while we havent added it here it would be good to next quantify the number of cells for each label.
-#get centroids and areas returns a list of objects and the center coordinate.
-#we need to deform the center coordinate according to visualign deformations¨
-#we need to then transform the coordinate into atlas space
-#and then save labels like before.
-
-
-
-
-
-# Create a list of flat file names from a directory:
-
-#flatfiles = FilesinDirectory('../test_data/ttA_2877_NOP_atlasmaps')
-#print(flatfiles)
\ No newline at end of file
diff --git a/PyNutil/generate_target_slice.py b/PyNutil/generate_target_slice.py
new file mode 100644
index 0000000000000000000000000000000000000000..074fccab093da4cf6e21af3dadee733dffae4b48
--- /dev/null
+++ b/PyNutil/generate_target_slice.py
@@ -0,0 +1,78 @@
+import numpy as np
+
+
+def generate_target_slice(alignment, volume):
+ Ox, Oy, Oz, Ux, Uy, Uz, Vx, Vy, Vz = alignment
+ ##just for mouse for now
+ bounds = [455, 527, 319]
+ X_size = np.sqrt(np.sum(np.square((Ux, Uy, Uz))))
+ Z_size = np.sqrt(np.sum(np.square((Vx, Vy, Vz))))
+ X_size = np.round(X_size).astype(int)
+ Z_size = np.round(Z_size).astype(int)
+ # make this into a grid (0,0) to (320,456)
+ Uarange = np.arange(0, 1, 1 / X_size)
+ Varange = np.arange(0, 1, 1 / Z_size)
+ Ugrid, Vgrid = np.meshgrid(Uarange, Varange)
+ Ugrid_x = Ugrid * Ux
+ Ugrid_y = Ugrid * Uy
+ Ugrid_z = Ugrid * Uz
+ Vgrid_x = Vgrid * Vx
+ Vgrid_y = Vgrid * Vy
+ Vgrid_z = Vgrid * Vz
+
+ X_Coords = (Ugrid_x + Vgrid_x).flatten() + Ox
+ Y_Coords = (Ugrid_y + Vgrid_y).flatten() + Oy
+ Z_Coords = (Ugrid_z + Vgrid_z).flatten() + Oz
+
+ X_Coords = np.round(X_Coords).astype(int)
+ Y_Coords = np.round(Y_Coords).astype(int)
+ Z_Coords = np.round(Z_Coords).astype(int)
+
+ out_bounds_Coords = (
+ (X_Coords > bounds[0]) | (Y_Coords > bounds[1]) | (Z_Coords > bounds[2])
+ )
+ X_pad = X_Coords.copy()
+ Y_pad = Y_Coords.copy()
+ Z_pad = Z_Coords.copy()
+
+ X_pad[out_bounds_Coords] = 0
+ Y_pad[out_bounds_Coords] = 0
+ Z_pad[out_bounds_Coords] = 0
+
+ regions = volume[X_pad, Y_pad, Z_pad]
+ ##this is a quick hack to solve rounding errors
+ C = len(regions)
+ compare = C - X_size * Z_size
+ if abs(compare) == X_size:
+ if compare > 0:
+ Z_size += 1
+ if compare < 0:
+ Z_size -= 1
+ elif abs(C - X_size * Z_size) == Z_size:
+ if compare > 0:
+ X_size += 1
+ if compare < 0:
+ X_size -= 1
+ elif abs(C - X_size * Z_size) == Z_size + X_size:
+ if compare > 0:
+ X_size += 1
+ Z_size += 1
+ if compare < 0:
+ X_size -= 1
+ Z_size -= 1
+ elif abs(C - X_size * Z_size) == Z_size - X_size:
+ if compare > 0:
+ X_size += 1
+ Z_size -= 1
+ if compare < 0:
+ X_size -= 1
+ Z_size += 1
+ elif abs(C - X_size * Z_size) == X_size - Z_size:
+ if compare > 0:
+ X_size -= 1
+ Z_size += 1
+ if compare < 0:
+ X_size += 1
+ Z_size -= 1
+ regions = regions.reshape((abs(Z_size), abs(X_size)))
+ return regions
diff --git a/PyNutil/main.py b/PyNutil/main.py
index bf284b4c229aa48f7caab40cb82444fb4e3acf85..b4944882c1ecfe729f0b6680395aa5e3f3a0825e 100644
--- a/PyNutil/main.py
+++ b/PyNutil/main.py
@@ -1,14 +1,313 @@
+from .metadata import metadata_loader
+from .read_and_write import read_atlas_volume, write_points_to_meshview
+from .coordinate_extraction import folder_to_atlas_space
+from .counting_and_load import label_points, pixel_count_per_region
+import json
+import pandas as pd
+from datetime import datetime
+import os
+class PyNutil:
+ """A utility class for working with brain atlases and segmentation data.
+ Parameters
+ ----------
+ segmentation_folder : str
+ The path to the folder containing the segmentation data.
+ alignment_json : str
+ The path to the alignment JSON file.
+ colour : int
+ The colour of the segmentation data to extract.
+ volume_path : str
+ The name of the atlas volume to use.
+ settings_file : str, optional
+ The path to a JSON file containing the above parameters.
+
+ Raises
+ ------
+ ValueError
+ If any of the required parameters are None.
+
+ Attributes
+ ----------
+ segmentation_folder : str
+ The path to the folder containing the segmentation data.
+ alignment_json : str
+ The path to the alignment JSON file.
+ colour : int
+ The colour of the segmentation data to extract.
+ atlas : str
+ The name of the atlas volume being used.
+ atlas_volume : numpy.ndarray
+ The 3D array representing the atlas volume.
+ atlas_labels : pandas.DataFrame
+ A DataFrame containing the labels for the atlas volume.
+ pixel_points : numpy.ndarray
+ An array of pixel coordinates extracted from the segmentation data.
+ labeled_points : numpy.ndarray
+ An array of labeled pixel coordinates.
+ label_df : pandas.DataFrame
+ A DataFrame containing the pixel counts per region.
+
+ Methods
+ -------
+ load_atlas_data()
+ Loads the atlas volume and labels from disk.
+ get_coordinates(non_linear=True, method='all')
+ Extracts pixel coordinates from the segmentation data.
+ extract_coordinates(non_linear, method)
+ Extracts pixel coordinates from the segmentation data but is only used internally.
+ quantify_coordinates()
+ Quantifies the pixel coordinates by region.
+ label_points()
+ Labels the pixel coordinates by region but is only used internally.
+ count_pixels_per_region(labeled_points)
+ Counts the number of pixels per region but is only used internally.
+ save_analysis(output_folder)
+ Saves the pixel coordinates and pixel counts to disk.
+ write_points_to_meshview(output_folder)
+ Writes the pixel coordinates and labels to a JSON file for visualization but is only used internally.
+
+ """
+
+ def __init__(
+ self,
+ segmentation_folder=None,
+ alignment_json=None,
+ colour=None,
+ volume_path=None,
+ settings_file=None,
+ ) -> None:
+ self.config, self.metadata_path = metadata_loader.load_config()
+ if settings_file is not None:
+ with open(settings_file, "r") as f:
+ settings = json.load(f)
+ try:
+ segmentation_folder = settings["segmentation_folder"]
+ alignment_json = settings["alignment_json"]
+ colour = settings["colour"]
+ volume_path = settings["volume_path"]
+ except KeyError as exc:
+ raise KeyError(
+ "settings file must contain segmentation_folder, alignment_json, colour, and volume_path"
+ ) from exc
+ # check if any values are None
+ if None in [segmentation_folder, alignment_json, colour, volume_path]:
+ raise ValueError(
+ "segmentation_folder, alignment_json, colour, and volume_path must all be specified and not be None"
+ )
+ if volume_path not in self.config["annotation_volumes"]:
+ raise ValueError(
+ f"Atlas {volume_path} not found in config file, valid atlases are: \n{' , '.join(list(self.config['annotation_volumes'].keys()))}"
+ )
-class PyNutil:
- def __init__(self, segmentation_folder) -> None:
self.segmentation_folder = segmentation_folder
- self.json_file = json_file
+ self.alignment_json = alignment_json
self.colour = colour
- self.output_path = output_path
+ self.atlas = volume_path
+ self.atlas_volume, self.atlas_labels = self.load_atlas_data()
+
+ def load_atlas_data(self):
+ """Loads the atlas volume and labels from disk.
+
+ Returns
+ -------
+ tuple
+ A tuple containing the atlas volume as a numpy.ndarray and the atlas labels as a pandas.DataFrame.
+
+ """
+ # load the metadata json as well as the path to stored data files
+ # this could potentially be moved into init
+ atlas_root_path = self.config["annotation_volume_directory"]
+ current_atlas_path = self.config["annotation_volumes"][self.atlas]["volume"]
+ print("loading atlas volume")
+ start_time = datetime.now()
+ atlas_volume = read_atlas_volume(f"{atlas_root_path}{current_atlas_path}")
+ time_taken = datetime.now() - start_time
+ print(f"atlas volume loaded in: {time_taken} ✅")
+ atlas_label_path = self.config["annotation_volumes"][self.atlas]["labels"]
+ print("loading atlas labels")
+ atlas_labels = pd.read_csv(f"{atlas_root_path}{atlas_label_path}")
+ print("atlas labels loaded ✅")
+ return atlas_volume, atlas_labels
+
+ def get_coordinates(self, non_linear=True, method="all", object_cutoff=0):
+ """Extracts pixel coordinates from the segmentation data.
+
+ Parameters
+ ----------
+ non_linear : bool, optional
+ Whether to use non-linear registration. Default is True.
+ method : str, optional
+ The method to use for extracting coordinates. Valid options are 'per_pixel', 'per_object', or 'all'.
+ Default is 'all'.
+ object_cutoff : int, optional
+ The minimum number of pixels per object to be included in the analysis. Default is 1.
+
+ Raises
+ ------
+ ValueError
+ If the specified method is not recognized.
+
+ """
+ if not hasattr(self, "atlas_volume"):
+ raise ValueError(
+ "Please run build_quantifier before running get_coordinates"
+ )
+ if method not in ["per_pixel", "per_object", "all"]:
+ raise ValueError(
+ f"method {method} not recognised, valid methods are: per_pixel, per_object, or all"
+ )
+ print("extracting coordinates")
+ (
+ pixel_points,
+ centroids,
+ points_len,
+ centroids_len,
+ segmentation_filenames,
+ ) = folder_to_atlas_space(
+ self.segmentation_folder,
+ self.alignment_json,
+ pixel_id=self.colour,
+ non_linear=non_linear,
+ method=method,
+ object_cutoff=object_cutoff,
+ )
+ self.pixel_points = pixel_points
+ self.centroids = centroids
+ ##points len and centroids len tell us how many points were extracted from each section
+ ##This will be used to split the data up later into per section files
+ self.points_len = points_len
+ self.centroids_len = centroids_len
+ self.segmentation_filenames = segmentation_filenames
+
+ def quantify_coordinates(self):
+ """Quantifies the pixel coordinates by region.
+
+ Raises
+ ------
+ ValueError
+ If the pixel coordinates have not been extracted.
+
+ """
+ if not hasattr(self, "pixel_points") and not hasattr(self, "centroids"):
+ raise ValueError(
+ "Please run get_coordinates before running quantify_coordinates"
+ )
+ print("quantifying coordinates")
+ labeled_points_centroids = None
+ labeled_points = None
+ if hasattr(self, "centroids"):
+ labeled_points_centroids = label_points(
+ self.centroids, self.atlas_volume, scale_factor=1
+ )
+ if hasattr(self, "pixel_points"):
+ labeled_points = label_points(
+ self.pixel_points, self.atlas_volume, scale_factor=1
+ )
+
+ self.label_df = pixel_count_per_region(
+ labeled_points, labeled_points_centroids, self.atlas_labels
+ )
+ prev_pl = 0
+ per_section_df = []
+ current_centroids = None
+ current_points = None
+ for pl in self.points_len:
+ if hasattr(self, "centroids"):
+ current_centroids = labeled_points_centroids[prev_pl : prev_pl + pl]
+ if hasattr(self, "pixel_points"):
+ current_points = labeled_points[prev_pl : prev_pl + pl]
+ current_df = pixel_count_per_region(
+ current_points, current_centroids, self.atlas_labels
+ )
+ per_section_df.append(current_df)
+ prev_pl += pl
+
+ self.labeled_points = labeled_points
+ self.labeled_points_centroids = labeled_points_centroids
+ self.per_section_df = per_section_df
+
+ print("quantification complete ✅")
+
+ def save_analysis(self, output_folder):
+ """Saves the pixel coordinates and pixel counts to different files in the specified
+ output folder.
+
+ Parameters
+ ----------
+ output_folder : str
+ The path to the output folder.
+
+ Raises
+ ------
+ ValueError
+ If the pixel coordinates have not been extracted.
+
+ """
+ if not os.path.exists(output_folder):
+ os.makedirs(output_folder)
+
+ if not hasattr(self, "label_df"):
+ print("no quantification found so we will only save the coordinates")
+ print(
+ "if you want to save the quantification please run quantify_coordinates"
+ )
+ else:
+ self.label_df.to_csv(
+ f"{output_folder}/counts.csv", sep=";", na_rep="", index=False
+ )
+ if not os.path.exists(f"{output_folder}/per_section_meshview"):
+ os.makedirs(f"{output_folder}/per_section_meshview")
+ if not os.path.exists(f"{output_folder}/per_section_reports"):
+ os.makedirs(f"{output_folder}/per_section_reports")
+
+ prev_pl = 0
+ prev_cl = 0
- def build_quantifier(self):
- #do all the expensive computations
+ for pl, cl, fn, df in zip(
+ self.points_len,
+ self.centroids_len,
+ self.segmentation_filenames,
+ self.per_section_df,
+ ):
+ split_fn = fn.split("/")[-1].split(".")[0]
+ df.to_csv(
+ f"{output_folder}/per_section_reports/{split_fn}.csv",
+ sep=";",
+ na_rep="",
+ index=False,
+ )
+ if hasattr(self, "pixel_points"):
+ write_points_to_meshview(
+ self.pixel_points[prev_pl : pl + prev_pl],
+ self.labeled_points[prev_pl : pl + prev_pl],
+ f"{output_folder}/per_section_meshview/{split_fn}_pixels.json",
+ self.atlas_labels,
+ )
+ if hasattr(self, "centroids"):
+ write_points_to_meshview(
+ self.centroids[prev_cl : cl + prev_cl],
+ self.labeled_points_centroids[prev_cl : cl + prev_cl],
+ f"{output_folder}/per_section_meshview/{split_fn}_centroids.json",
+ self.atlas_labels,
+ )
+ prev_cl += cl
+ prev_pl += pl
+ if hasattr(self, "pixel_points"):
+ write_points_to_meshview(
+ self.pixel_points,
+ self.labeled_points,
+ f"{output_folder}/pixels_meshview.json",
+ self.atlas_labels,
+ )
+ if hasattr(self, "centroids"):
+ write_points_to_meshview(
+ self.centroids,
+ self.labeled_points_centroids,
+ f"{output_folder}/objects_meshview.json",
+ self.atlas_labels,
+ )
+ print("analysis saved ✅")
diff --git a/PyNutil/metadata/__init__.py b/PyNutil/metadata/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..b6e690fd59145ce8900fd9ab8d8a996ee7d33834
--- /dev/null
+++ b/PyNutil/metadata/__init__.py
@@ -0,0 +1 @@
+from . import *
diff --git a/PyNutil/metadata/config.json b/PyNutil/metadata/config.json
new file mode 100644
index 0000000000000000000000000000000000000000..064d131d1b2d0a85f06e1d8a69d5d27818dd60fa
--- /dev/null
+++ b/PyNutil/metadata/config.json
@@ -0,0 +1,28 @@
+{"annotation_volumes":{
+ "allen2015":{
+ "labels":"allen2015_colours.csv",
+ "volume":"None"
+ },
+ "allen2017":{
+ "labels":"allen2017_colours.csv",
+ "volume":"annotation_25_reoriented_2017.nrrd"
+ },
+ "allen2022":{
+ "labels":"allen2022_colours.csv",
+ "volume":"annotation_10_reoriented_2022.nrrd"
+ },
+ "WHS_Atlas_Rat_Brain_v2":{
+ "labels":"WHS_v2_colours.csv",
+ "volume":"None"
+ },
+ "WHS_Atlas_Rat_Brain_v3":{
+ "labels":"WHS_v3_colours.csv",
+ "volume":"None"
+ },
+ "WHS_Atlas_Rat_Brain_v4":{
+ "labels":"WHS_v4_colours.csv",
+ "volume":"None"
+ }
+},
+"annotation_volume_directory":"PyNutil/metadata/annotation_volumes/"
+}
\ No newline at end of file
diff --git a/PyNutil/metadata/metadata_loader.py b/PyNutil/metadata/metadata_loader.py
new file mode 100644
index 0000000000000000000000000000000000000000..ae3361f7d15394ba1799ae800dfa3b3c867d0dc9
--- /dev/null
+++ b/PyNutil/metadata/metadata_loader.py
@@ -0,0 +1,20 @@
+import json
+from pathlib import Path
+import os
+
+
+def load_config() -> dict:
+ """
+ Loads the config file
+
+ :return: the configuration file
+ :rtype: dict
+ """
+ # returns a path to the config file assuming that it is in the same directory as this script
+ path = str(Path(__file__).parent.parent.absolute()) + "/metadata/config.json"
+ # open the config file
+ with open(path, "r") as f:
+ # load the config file
+ config = json.load(f)
+ # return the config file and path
+ return config, path
diff --git a/PyNutil/read_and_write.py b/PyNutil/read_and_write.py
index a701ebf2455fb092a3bb60b2f4a3c65810f6233c..a662371a333bfb5f30d8f859829e2f712ff741f8 100644
--- a/PyNutil/read_and_write.py
+++ b/PyNutil/read_and_write.py
@@ -4,102 +4,112 @@ import struct
import pandas as pd
import matplotlib.pyplot as plt
import os
+import nrrd
-#related to read and write
+# related to read and write
# this function reads a VisuAlign JSON and returns the slices
-def loadVisuAlignJson(filename):
+def load_visualign_json(filename):
with open(filename) as f:
vafile = json.load(f)
slices = vafile["slices"]
return slices
-#related to read_and_write, used in WritePointsToMeshview
+# related to read_and_write, used in write_points_to_meshview
# this function returns a dictionary of region names
-def createRegionDict(points, regions):
+def create_region_dict(points, regions):
"""points is a list of points and regions is an id for each point"""
- regionDict = {region:points[regions==region].flatten().tolist() for region in np.unique(regions)}
- return regionDict
+ region_dict = {
+ region: points[regions == region].flatten().tolist()
+ for region in np.unique(regions)
+ }
+ return region_dict
-#related to read and write: WritePoints
+# related to read and write: write_points
# this function writes the region dictionary to a meshview json
-def WritePoints(pointsDict, filename, infoFile):
-
+def write_points(points_dict, filename, info_file):
meshview = [
- {
- "idx": idx,
- "count": len(pointsDict[name])//3,
- "name" :str(infoFile["name"].values[infoFile["idx"]==name][0]),
- "triplets": pointsDict[name],
- "r": str(infoFile["r"].values[infoFile["idx"]==name][0]),
- "g": str(infoFile["g"].values[infoFile["idx"]==name][0]),
- "b": str(infoFile["b"].values[infoFile["idx"]==name][0])
- }
- for name, idx in zip(pointsDict.keys(), range(len(pointsDict.keys())))
+ {
+ "idx": idx,
+ "count": len(points_dict[name]) // 3,
+ "name": str(info_file["name"].values[info_file["idx"] == name][0]),
+ "triplets": points_dict[name],
+ "r": str(info_file["r"].values[info_file["idx"] == name][0]),
+ "g": str(info_file["g"].values[info_file["idx"] == name][0]),
+ "b": str(info_file["b"].values[info_file["idx"] == name][0]),
+ }
+ for name, idx in zip(points_dict.keys(), range(len(points_dict.keys())))
]
- #write meshview json
+ # write meshview json
with open(filename, "w") as f:
json.dump(meshview, f)
-# related to read and write: WritePointsToMeshview
-# this function combines createRegionDict and WritePoints functions
-def WritePointsToMeshview(points, pointNames, filename, infoFile):
- regionDict = createRegionDict(points, pointNames)
- WritePoints(regionDict, filename, infoFile)
+# related to read and write: write_points_to_meshview
+# this function combines create_region_dict and write_points functions
+def write_points_to_meshview(points, point_names, filename, info_file):
+ region_dict = create_region_dict(points, point_names)
+ write_points(region_dict, filename, info_file)
-def SaveDataframeasCSV(df_to_save, output_csv):
+# I think this might not need to be its own function :)
+def save_dataframe_as_csv(df_to_save, output_csv):
"""Function for saving a df as a CSV file"""
- df_to_save.to_csv(output_csv, sep=";", na_rep='', index= False)
+ df_to_save.to_csv(output_csv, sep=";", na_rep="", index=False)
-def FlattoArray(flatfile):
+def flat_to_array(flatfile):
"""Read flat file and write into an np array, return array"""
- with open(flatfile,"rb") as f:
- #i dont know what b is, w and h are the width and height that we get from the
- #flat file header
- b,w,h=struct.unpack(">BII",f.read(9))
- #data is a one dimensional list of values
- #it has the shape width times height
- data =struct.unpack(">"+("xBH"[b]*(w*h)),f.read(b*w*h))
-
- #convert flat file data into an array, previously data was a tuple
+ with open(flatfile, "rb") as f:
+ # i dont know what b is, w and h are the width and height that we get from the
+ # flat file header
+ b, w, h = struct.unpack(">BII", f.read(9))
+ # data is a one dimensional list of values
+ # it has the shape width times height
+ data = struct.unpack(">" + ("xBH"[b] * (w * h)), f.read(b * w * h))
+
+ # convert flat file data into an array, previously data was a tuple
imagedata = np.array(data)
- #create an empty image array in the right shape, write imagedata into image_array
- image = np.zeros((h,w))
+ # create an empty image array in the right shape, write imagedata into image_array
+ image = np.zeros((h, w))
for x in range(w):
for y in range(h):
- image[y,x] = imagedata[x+y*w]
+ image[y, x] = imagedata[x + y * w]
image_arr = np.array(image)
return image_arr
-def LabeltoArray(label_path, image_array):
- """assign label file values into image array, return array"""
+def label_to_array(label_path, image_array):
+ """assign label file values into image array, return array"""
labelfile = pd.read_csv(label_path)
- allen_id_image = np.zeros((h,w)) # create an empty image array
+ allen_id_image = np.zeros((h, w)) # create an empty image array
coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h)))
- values = image_array[coordsx, coordsy] # assign x,y coords from image_array into values
- lbidx = labelfile['idx'].values
- allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
+ values = image_array[
+ coordsx, coordsy
+ ] # assign x,y coords from image_array into values
+ lbidx = labelfile["idx"].values
+ allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
return allen_id_image
-def FilesinDirectory(directory):
+def files_in_directory(directory):
"""return list of flat file names in a directory"""
list_of_files = []
for file in os.scandir(directory):
if file.path.endswith(".flat") and file.is_file:
- #print(filename.path)
- #newfilename, file_ext = os.path.splitext(filename)
- #print(newfilename)
+ # print(filename.path)
+ # newfilename, file_ext = os.path.splitext(filename)
+ # print(newfilename)
filename = os.path.basename(file)
newfilename, file_ext = os.path.splitext(filename)
list_of_files.append(newfilename)
return list_of_files
+
+def read_atlas_volume(atlas_volume_path):
+ data, header = nrrd.read(atlas_volume_path)
+ return data
diff --git a/PyNutil/testing_openflatfile.py b/PyNutil/testing_openflatfile.py
deleted file mode 100644
index 59bc5f332d4601e3c8e7066cbe33bb432a2dea83..0000000000000000000000000000000000000000
--- a/PyNutil/testing_openflatfile.py
+++ /dev/null
@@ -1,63 +0,0 @@
-base= r"../test_data\ttA_2877_NOP_atlasmaps\2877_NOP_tTA_lacZ_Xgal_s037_nl.flat"
-import numpy as np
-import struct
-import pandas as pd
-import matplotlib.pyplot as plt
-
-"""read flat file and write into an np array"""
-
-with open(base,"rb") as f:
- #i dont know what b is, w and h are the width and height that we get from the
- #flat file header
- b,w,h=struct.unpack(">BII",f.read(9))
- #data is a one dimensional list of values
- #it has the shape width times height
- data =struct.unpack(">"+("xBH"[b]*(w*h)),f.read(b*w*h))
-
- #convert flat file data into an array, previously data was a tuple
- imagedata = np.array(data)
-
- #create an empty image array in the right shape,
- image = np.zeros((h,w))
- #pallette = dict(zip(np.unique(data), np.random.randint(0,255,len(np.unique(data)))))
-
- #assign values from flat file into the image array
- for x in range(w):
- for y in range(h):
- image[y,x] = imagedata[x+y*w]
-
- image_arr = np.array(image)
-
-# show image with plt.imshow(image_arr)
-
-"""assign label file values into image array"""
-
-labelfile = pd.read_csv(r"../annotation_volumes\allen2017_colours.csv")
-allen_id_image = np.zeros((h,w)) # create an empty image array
-
-"""for ph in range(h):
- for pw in range(w):
- value_in_data_at_pixel = int(image_arr[ph,pw])
- allen_id_image[ph, pw] = labelfile.loc[value_in_data_at_pixel, 'idx']"""
-
-"""for efficiency, vectorize instead of using the for loops above"""
-coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h)))
-values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values
-lbidx = labelfile['idx'].values
-allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
-
-
-"""count pixels for unique idx"""
-unique_ids, counts = np.unique(allen_id_image, return_counts=True)
-
-area_per_label = list(zip(unique_ids,counts))
-# create a list of unique regions and pixel counts per region
-
-df_area_per_label = pd.DataFrame(area_per_label, columns=["idx","area_count"])
-# create a pandas df with regions and pixel counts
-
-print(df_area_per_label)
-df_area_per_label.to_csv("../outputs/s037_area_per_idx.csv", sep=";", na_rep='', index= False)
-
-#df_label_colours =pd.read_csv(label_colours, sep=",")
-# find colours corresponding to each region ID and add to the pandas dataframe
diff --git a/PyNutil/visualign_deformations.py b/PyNutil/visualign_deformations.py
index 36d7789fe457f7bc5825469964a9714dc3ecd3ce..5441b5e690f1af7a7eca2dcaea0968747db6f610 100644
--- a/PyNutil/visualign_deformations.py
+++ b/PyNutil/visualign_deformations.py
@@ -2,165 +2,230 @@
import numpy as np
-def triangulate(w,h,markers):
- vertices=[[-0.1*w,-0.1*h,-0.1*w,-0.1*h],
- [ 1.1*w,-0.1*h, 1.1*w,-0.1*h],
- [-0.1*w, 1.1*h,-0.1*w, 1.1*h],
- [ 1.1*w, 1.1*h, 1.1*w, 1.1*h]]
+
+def triangulate(w, h, markers):
+ vertices = [
+ [-0.1 * w, -0.1 * h, -0.1 * w, -0.1 * h],
+ [1.1 * w, -0.1 * h, 1.1 * w, -0.1 * h],
+ [-0.1 * w, 1.1 * h, -0.1 * w, 1.1 * h],
+ [1.1 * w, 1.1 * h, 1.1 * w, 1.1 * h],
+ ]
# vertices = [[0, 0, 0, 0],
# [w, 0, w, 0],
# [0, h, 0, h],
# [w, h, w, h]]
- edges=[0]*((len(markers)+4)*(len(markers)+4-1)//2)
- triangles=[Triangle(0,1,2,vertices,edges),Triangle(1,2,3,vertices,edges)]
- edges[0]=edges[1]=edges[4]=edges[5]=2
- for marker in markers:
- x,y=marker[2:4]
- found=False
- keep=[]
- remove=[]
- for triangle in triangles:
- if not found and triangle.intriangle(x,y):
- found=True
- if triangle.incircle(x,y):
- remove.append(triangle)
- else:
- keep.append(triangle)
- if found:
- for triangle in remove:
- triangle.removeedges()
- else:
- keep.extend(remove)
- triangles=keep
- vcount=len(vertices)
- vertices.append(marker)
- for i in range(vcount-1):
- for j in range(i+1,vcount):
- if edges[edgeindex(i,j)]==1:
- triangles.append(Triangle(i,j,vcount,vertices,edges))
- return triangles
-
-def transform(triangulation,x,y):
- for triangle in triangulation:
- uv1=triangle.intriangle(x,y)
- if uv1:
- return (triangle.A[0]
- +(triangle.B[0]-triangle.A[0])*uv1[0]
- +(triangle.C[0]-triangle.A[0])*uv1[1],
- triangle.A[1]
- +(triangle.B[1]-triangle.A[1])*uv1[0]
- +(triangle.C[1]-triangle.A[1])*uv1[1])
-def transform_vec(triangulation,x,y):
- xPrime = np.zeros(x.shape,float)
- yPrime = np.zeros(y.shape,float)
+ edges = [0] * ((len(markers) + 4) * (len(markers) + 4 - 1) // 2)
+ triangles = [Triangle(0, 1, 2, vertices, edges), Triangle(1, 2, 3, vertices, edges)]
+ edges[0] = edges[1] = edges[4] = edges[5] = 2
+ for marker in markers:
+ x, y = marker[2:4]
+ found = False
+ keep = []
+ remove = []
+ for triangle in triangles:
+ if not found and triangle.intriangle(x, y):
+ found = True
+ if triangle.incircle(x, y):
+ remove.append(triangle)
+ else:
+ keep.append(triangle)
+ if found:
+ for triangle in remove:
+ triangle.removeedges()
+ else:
+ keep.extend(remove)
+ triangles = keep
+ vcount = len(vertices)
+ vertices.append(marker)
+ for i in range(vcount - 1):
+ for j in range(i + 1, vcount):
+ if edges[edgeindex(i, j)] == 1:
+ triangles.append(Triangle(i, j, vcount, vertices, edges))
+ return triangles
+
+
+def transform(triangulation, x, y):
+ for triangle in triangulation:
+ uv1 = triangle.intriangle(x, y)
+ if uv1:
+ return (
+ triangle.A[0]
+ + (triangle.B[0] - triangle.A[0]) * uv1[0]
+ + (triangle.C[0] - triangle.A[0]) * uv1[1],
+ triangle.A[1]
+ + (triangle.B[1] - triangle.A[1]) * uv1[0]
+ + (triangle.C[1] - triangle.A[1]) * uv1[1],
+ )
+
+
+def transform_vec(triangulation, x, y):
+ xPrime = np.zeros(x.shape, float)
+ yPrime = np.zeros(y.shape, float)
for triangle in triangulation:
- triangle.intriangle_vec(x,y, xPrime,yPrime)
- return (xPrime,yPrime)
-
-def forwardtransform(triangulation,x,y):
- for triangle in triangulation:
- uv1=triangle.inforward(x,y)
- if uv1:
- return (triangle.A[2]
- +(triangle.B[2]-triangle.A[2])*uv1[0]
- +(triangle.C[2]-triangle.A[2])*uv1[1],
- triangle.A[3]
- +(triangle.B[3]-triangle.A[3])*uv1[0]
- +(triangle.C[3]-triangle.A[3])*uv1[1])
-
+ triangle.intriangle_vec(x, y, xPrime, yPrime)
+ return (xPrime, yPrime)
+
+
+def forwardtransform(triangulation, x, y):
+ for triangle in triangulation:
+ uv1 = triangle.inforward(x, y)
+ if uv1:
+ return (
+ triangle.A[2]
+ + (triangle.B[2] - triangle.A[2]) * uv1[0]
+ + (triangle.C[2] - triangle.A[2]) * uv1[1],
+ triangle.A[3]
+ + (triangle.B[3] - triangle.A[3]) * uv1[0]
+ + (triangle.C[3] - triangle.A[3]) * uv1[1],
+ )
+
+
# xy: 2-dimensional array with one xy-pair per row
-def forwardtransform_vec(triangulation,x,y):
- xPrime = np.zeros(x.shape,float)
- yPrime = np.zeros(y.shape,float)
- for triangle in triangulation:
- triangle.inforward_vec(x,y, xPrime,yPrime)
- return (xPrime,yPrime)
-
+def forwardtransform_vec(triangulation, x, y):
+ xPrime = np.zeros(x.shape, float)
+ yPrime = np.zeros(y.shape, float)
+ for triangle in triangulation:
+ triangle.inforward_vec(x, y, xPrime, yPrime)
+ return (xPrime, yPrime)
+
+
def inv3x3(m):
- det = m[0][0] * (m[1][1] * m[2][2] - m[2][1] * m[1][2])\
- - m[0][1] * (m[1][0] * m[2][2] - m[1][2] * m[2][0])\
- + m[0][2] * (m[1][0] * m[2][1] - m[1][1] * m[2][0])
- if det == 0:
- return None
- return [[(m[1][1] * m[2][2] - m[2][1] * m[1][2]) / det,
- (m[0][2] * m[2][1] - m[0][1] * m[2][2]) / det,
- (m[0][1] * m[1][2] - m[0][2] * m[1][1]) / det],
- [(m[1][2] * m[2][0] - m[1][0] * m[2][2]) / det,
- (m[0][0] * m[2][2] - m[0][2] * m[2][0]) / det,
- (m[1][0] * m[0][2] - m[0][0] * m[1][2]) / det],
- [(m[1][0] * m[2][1] - m[2][0] * m[1][1]) / det,
- (m[2][0] * m[0][1] - m[0][0] * m[2][1]) / det,
- (m[0][0] * m[1][1] - m[1][0] * m[0][1]) / det]]
-
-def rowmul3(v,m):return [sum(v[j]*m[j][i] for j in range(3)) for i in range(3)]
-def rowmul3_vec(x,y,m):return np.outer(x,m[0])+np.outer(y,m[1])+m[2]
-def distsquare(ax,ay,bx,by):return (ax-bx)*(ax-bx)+(ay-by)*(ay-by)
-def edgeindex(a,b):i=min(a,b);j=max(a,b);return j*(j-1)//2+i
-
+ det = (
+ m[0][0] * (m[1][1] * m[2][2] - m[2][1] * m[1][2])
+ - m[0][1] * (m[1][0] * m[2][2] - m[1][2] * m[2][0])
+ + m[0][2] * (m[1][0] * m[2][1] - m[1][1] * m[2][0])
+ )
+ if det == 0:
+ return None
+ return [
+ [
+ (m[1][1] * m[2][2] - m[2][1] * m[1][2]) / det,
+ (m[0][2] * m[2][1] - m[0][1] * m[2][2]) / det,
+ (m[0][1] * m[1][2] - m[0][2] * m[1][1]) / det,
+ ],
+ [
+ (m[1][2] * m[2][0] - m[1][0] * m[2][2]) / det,
+ (m[0][0] * m[2][2] - m[0][2] * m[2][0]) / det,
+ (m[1][0] * m[0][2] - m[0][0] * m[1][2]) / det,
+ ],
+ [
+ (m[1][0] * m[2][1] - m[2][0] * m[1][1]) / det,
+ (m[2][0] * m[0][1] - m[0][0] * m[2][1]) / det,
+ (m[0][0] * m[1][1] - m[1][0] * m[0][1]) / det,
+ ],
+ ]
+
+
+def rowmul3(v, m):
+ return [sum(v[j] * m[j][i] for j in range(3)) for i in range(3)]
+
+
+def rowmul3_vec(x, y, m):
+ return np.outer(x, m[0]) + np.outer(y, m[1]) + m[2]
+
+
+def distsquare(ax, ay, bx, by):
+ return (ax - bx) * (ax - bx) + (ay - by) * (ay - by)
+
+
+def edgeindex(a, b):
+ i = min(a, b)
+ j = max(a, b)
+ return j * (j - 1) // 2 + i
+
+
class Triangle:
- def __init__(self,a,b,c,vlist,elist):
- self.A=vlist[a]
- self.B=vlist[b]
- self.C=vlist[c]
- self.elist=elist
- self.edges=[edgeindex(a,b),
- edgeindex(a,c),
- edgeindex(b,c)]
- for edge in self.edges:
- elist[edge]+=1
- ax,ay=self.A[0:2]
- bx,by=self.B[0:2]
- cx,cy=self.C[0:2]
- self.forwarddecomp=inv3x3([[bx-ax,by-ay,0],
- [cx-ax,cy-ay,0],
- [ax,ay,1]])
- ax,ay=self.A[2:4]
- bx,by=self.B[2:4]
- cx,cy=self.C[2:4]
- self.decomp=inv3x3([[bx-ax,by-ay,0],
- [cx-ax,cy-ay,0],
- [ax,ay,1]])
- a2=distsquare(bx,by,cx,cy)
- b2=distsquare(ax,ay,cx,cy)
- c2=distsquare(ax,ay,bx,by)
- fa=a2*(b2+c2-a2)
- fb=b2*(c2+a2-b2)
- fc=c2*(a2+b2-c2)
- self.den=fa+fb+fc
- self.Mdenx=fa*ax+fb*bx+fc*cx
- self.Mdeny=fa*ay+fb*by+fc*cy
- self.r2den=distsquare(ax*self.den,ay*self.den,self.Mdenx,self.Mdeny)
-
- def removeedges(self):
- for edge in self.edges:
- self.elist[edge]-=1
- del self.edges
- del self.elist
-
- def incircle(self,x,y):
- return distsquare(x*self.den,y*self.den,self.Mdenx,self.Mdeny)<self.r2den
-
- def intriangle(self,x,y):
- uv1=rowmul3([x,y,1],self.decomp)
- if 0<=uv1[0]<=1 and 0<=uv1[1]<=1 and uv1[0]+uv1[1]<=1:
- return uv1
-
- def inforward(self,x,y):
- uv1=rowmul3([x,y,1],self.forwarddecomp)
- if 0<=uv1[0]<=1 and 0<=uv1[1]<=1 and uv1[0]+uv1[1]<=1:
- return uv1
-
- # xy: 2-dimensional array with one xy-pair per row
- def inforward_vec(self,x,y, xPrime,yPrime):
- uv1 = rowmul3_vec(x,y,self.forwarddecomp)
- # also compute the next step, since it uses the parameters of this triangle
- ok = (uv1[:,0]>=0) & (uv1[:,0]<=1) & (uv1[:,1]>=0) & (uv1[:,1]<=1) & (uv1[:,0]+uv1[:,1]<=1)
- xPrime[ok] = self.A[2] + (self.B[2]-self.A[2])*uv1[ok,0] + (self.C[2]-self.A[2])*uv1[ok,1]
- yPrime[ok] = self.A[3] + (self.B[3]-self.A[3])*uv1[ok,0] + (self.C[3]-self.A[3])*uv1[ok,1]
-
- def intriangle_vec(self,x,y, xPrime,yPrime):
- uv1 = rowmul3_vec(x,y,self.decomp)
- # also compute the next step, since it uses the parameters of this triangle
- ok = (uv1[:,0]>=0) & (uv1[:,0]<=1) & (uv1[:,1]>=0) & (uv1[:,1]<=1) & (uv1[:,0]+uv1[:,1]<=1)
- xPrime[ok] = self.A[0] + (self.B[0]-self.A[0])*uv1[ok,0] + (self.C[0]-self.A[0])*uv1[ok,1]
- yPrime[ok] = self.A[1] + (self.B[1]-self.A[1])*uv1[ok,0] + (self.C[1]-self.A[1])*uv1[ok,1]
+ def __init__(self, a, b, c, vlist, elist):
+ self.A = vlist[a]
+ self.B = vlist[b]
+ self.C = vlist[c]
+ self.elist = elist
+ self.edges = [edgeindex(a, b), edgeindex(a, c), edgeindex(b, c)]
+ for edge in self.edges:
+ elist[edge] += 1
+ ax, ay = self.A[0:2]
+ bx, by = self.B[0:2]
+ cx, cy = self.C[0:2]
+ self.forwarddecomp = inv3x3(
+ [[bx - ax, by - ay, 0], [cx - ax, cy - ay, 0], [ax, ay, 1]]
+ )
+ ax, ay = self.A[2:4]
+ bx, by = self.B[2:4]
+ cx, cy = self.C[2:4]
+ self.decomp = inv3x3(
+ [[bx - ax, by - ay, 0], [cx - ax, cy - ay, 0], [ax, ay, 1]]
+ )
+ a2 = distsquare(bx, by, cx, cy)
+ b2 = distsquare(ax, ay, cx, cy)
+ c2 = distsquare(ax, ay, bx, by)
+ fa = a2 * (b2 + c2 - a2)
+ fb = b2 * (c2 + a2 - b2)
+ fc = c2 * (a2 + b2 - c2)
+ self.den = fa + fb + fc
+ self.Mdenx = fa * ax + fb * bx + fc * cx
+ self.Mdeny = fa * ay + fb * by + fc * cy
+ self.r2den = distsquare(ax * self.den, ay * self.den, self.Mdenx, self.Mdeny)
+
+ def removeedges(self):
+ for edge in self.edges:
+ self.elist[edge] -= 1
+ del self.edges
+ del self.elist
+
+ def incircle(self, x, y):
+ return (
+ distsquare(x * self.den, y * self.den, self.Mdenx, self.Mdeny) < self.r2den
+ )
+
+ def intriangle(self, x, y):
+ uv1 = rowmul3([x, y, 1], self.decomp)
+ if 0 <= uv1[0] <= 1 and 0 <= uv1[1] <= 1 and uv1[0] + uv1[1] <= 1:
+ return uv1
+
+ def inforward(self, x, y):
+ uv1 = rowmul3([x, y, 1], self.forwarddecomp)
+ if 0 <= uv1[0] <= 1 and 0 <= uv1[1] <= 1 and uv1[0] + uv1[1] <= 1:
+ return uv1
+
+ # xy: 2-dimensional array with one xy-pair per row
+ def inforward_vec(self, x, y, xPrime, yPrime):
+ uv1 = rowmul3_vec(x, y, self.forwarddecomp)
+ # also compute the next step, since it uses the parameters of this triangle
+ ok = (
+ (uv1[:, 0] >= 0)
+ & (uv1[:, 0] <= 1)
+ & (uv1[:, 1] >= 0)
+ & (uv1[:, 1] <= 1)
+ & (uv1[:, 0] + uv1[:, 1] <= 1)
+ )
+ xPrime[ok] = (
+ self.A[2]
+ + (self.B[2] - self.A[2]) * uv1[ok, 0]
+ + (self.C[2] - self.A[2]) * uv1[ok, 1]
+ )
+ yPrime[ok] = (
+ self.A[3]
+ + (self.B[3] - self.A[3]) * uv1[ok, 0]
+ + (self.C[3] - self.A[3]) * uv1[ok, 1]
+ )
+
+ def intriangle_vec(self, x, y, xPrime, yPrime):
+ uv1 = rowmul3_vec(x, y, self.decomp)
+ # also compute the next step, since it uses the parameters of this triangle
+ ok = (
+ (uv1[:, 0] >= 0)
+ & (uv1[:, 0] <= 1)
+ & (uv1[:, 1] >= 0)
+ & (uv1[:, 1] <= 1)
+ & (uv1[:, 0] + uv1[:, 1] <= 1)
+ )
+ xPrime[ok] = (
+ self.A[0]
+ + (self.B[0] - self.A[0]) * uv1[ok, 0]
+ + (self.C[0] - self.A[0]) * uv1[ok, 1]
+ )
+ yPrime[ok] = (
+ self.A[1]
+ + (self.B[1] - self.A[1]) * uv1[ok, 0]
+ + (self.C[1] - self.A[1]) * uv1[ok, 1]
+ )
diff --git a/annotation_volumes/AllenMouseBrain_Atlas_CCF_2015.label b/annotation_volumes/AllenMouseBrain_Atlas_CCF_2015.label
deleted file mode 100644
index 990cbe2d2dc6a9554aba1d000d04dbec10c0d371..0000000000000000000000000000000000000000
--- a/annotation_volumes/AllenMouseBrain_Atlas_CCF_2015.label
+++ /dev/null
@@ -1,1302 +0,0 @@
-################################################
-# ITK-SnAP Label Description File
-# File format:
-# IDX -R- -G- -B- -A-- VIS MSH LABEL
-# Fields:
-# IDX: Zero-based index
-# -R-: Red color component (0..255)
-# -G-: Green color component (0..255)
-# -B-: Blue color component (0..255)
-# -A-: Label transparency (0.00 .. 1.00)
-# VIS: Label visibility (0 or 1)
-# IDX: Label mesh visibility (0 or 1)
-# LABEL: Label description
-################################################
- 0 0 0 0 0 0 0 "Clear Label"
-997 255 255 255 1 1 1 "root"
-8 191 218 227 1 1 1 "Basic cell groups and regions"
-567 176 240 255 1 1 1 "Cerebrum"
-688 176 255 184 1 1 1 "Cerebral cortex"
-695 112 255 112 1 1 1 "Cortical plate"
-315 112 255 113 1 1 1 "Isocortex"
-184 38 143 69 1 1 1 "Frontal pole, cerebral cortex"
-68 38 143 69 1 1 1 "Frontal pole, layer 1"
-667 38 143 69 1 1 1 "Frontal pole, layer 2/3"
-500 31 157 90 1 1 1 "Somatomotor areas"
-107 31 157 90 1 1 1 "Somatomotor areas, Layer 1"
-219 31 157 90 1 1 1 "Somatomotor areas, Layer 2/3"
-299 31 157 90 1 1 1 "Somatomotor areas, Layer 5"
-644 31 157 90 1 1 1 "Somatomotor areas, Layer 6a"
-947 31 157 90 1 1 1 "Somatomotor areas, Layer 6b"
-985 31 157 90 1 1 1 "Primary motor area"
-320 31 157 90 1 1 1 "Primary motor area, Layer 1"
-943 31 157 90 1 1 1 "Primary motor area, Layer 2/3"
-648 31 157 90 1 1 1 "Primary motor area, Layer 5"
-844 31 157 90 1 1 1 "Primary motor area, Layer 6a"
-882 31 157 90 1 1 1 "Primary motor area, Layer 6b"
-993 31 157 90 1 1 1 "Secondary motor area"
-656 31 157 90 1 1 1 "Secondary motor area, layer 1"
-962 31 157 90 1 1 1 "Secondary motor area, layer 2/3"
-767 31 157 90 1 1 1 "Secondary motor area, layer 5"
-1021 31 157 90 1 1 1 "Secondary motor area, layer 6a"
-1085 31 157 90 1 1 1 "Secondary motor area, layer 6b"
-453 24 128 100 1 1 1 "Somatosensory areas"
-12993 24 128 100 1 1 1 "Somatosensory areas, layer 1"
-12994 24 128 100 1 1 1 "Somatosensory areas, layer 2/3"
-12995 24 128 100 1 1 1 "Somatosensory areas, layer 4"
-12996 24 128 100 1 1 1 "Somatosensory areas, layer 5"
-12997 24 128 100 1 1 1 "Somatosensory areas, layer 6a"
-12998 24 128 100 1 1 1 "Somatosensory areas, layer 6b"
-322 24 128 100 1 1 1 "Primary somatosensory area"
-793 24 128 100 1 1 1 "Primary somatosensory area, layer 1"
-346 24 128 100 1 1 1 "Primary somatosensory area, layer 2/3"
-865 24 128 100 1 1 1 "Primary somatosensory area, layer 4"
-921 24 128 100 1 1 1 "Primary somatosensory area, layer 5"
-686 24 128 100 1 1 1 "Primary somatosensory area, layer 6a"
-719 24 128 100 1 1 1 "Primary somatosensory area, layer 6b"
-353 24 128 100 1 1 1 "Primary somatosensory area, nose"
-558 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 1"
-838 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 2/3"
-654 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 4"
-702 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 5"
-889 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 6a"
-929 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 6b"
-329 24 128 100 1 1 1 "Primary somatosensory area, barrel field"
-981 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 1"
-201 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 2/3"
-1047 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 4"
-1070 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 5"
-1038 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 6a"
-1062 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 6b"
-480149202 24 128 100 1 1 1 "Rostrolateral lateral visual area"
-480149206 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 1"
-480149210 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 2/3"
-480149214 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 4"
-480149218 24 128 100 1 1 1 "Rostrolateral lateral visual area,layer 5"
-480149222 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 6a"
-480149226 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 6b"
-337 24 128 100 1 1 1 "Primary somatosensory area, lower limb"
-1030 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 1"
-113 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 2/3"
-1094 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 4"
-1128 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 5"
-478 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 6a"
-510 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 6b"
-345 24 128 100 1 1 1 "Primary somatosensory area, mouth"
-878 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 1"
-657 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 2/3"
-950 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 4"
-974 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 5"
-1102 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 6a"
-2 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 6b"
-369 24 128 100 1 1 1 "Primary somatosensory area, upper limb"
-450 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 1"
-854 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 2/3"
-577 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 4"
-625 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 5"
-945 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 6a"
-1026 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 6b"
-361 24 128 100 1 1 1 "Primary somatosensory area, trunk"
-1006 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 1"
-670 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 2/3"
-1086 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 4"
-1111 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 5"
-9 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 6a"
-461 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 6b"
-182305689 24 128 100 1 1 1 "Primary somatosensory area, unassigned"
-182305693 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 1"
-182305697 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 2/3"
-182305701 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 4"
-182305705 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 5"
-182305709 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 6a"
-182305713 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 6b"
-378 24 128 100 1 1 1 "Supplemental somatosensory area"
-873 24 128 100 1 1 1 "Supplemental somatosensory area, layer 1"
-806 24 128 100 1 1 1 "Supplemental somatosensory area, layer 2/3"
-1035 24 128 100 1 1 1 "Supplemental somatosensory area, layer 4"
-1090 24 128 100 1 1 1 "Supplemental somatosensory area, layer 5"
-862 24 128 100 1 1 1 "Supplemental somatosensory area, layer 6a"
-893 24 128 100 1 1 1 "Supplemental somatosensory area, layer 6b"
-1057 0 156 117 1 1 1 "Gustatory areas"
-36 0 156 117 1 1 1 "Gustatory areas, layer 1"
-180 0 156 117 1 1 1 "Gustatory areas, layer 2/3"
-148 0 156 117 1 1 1 "Gustatory areas, layer 4"
-187 0 156 117 1 1 1 "Gustatory areas, layer 5"
-638 0 156 117 1 1 1 "Gustatory areas, layer 6a"
-662 0 156 117 1 1 1 "Gustatory areas, layer 6b"
-677 17 173 131 1 1 1 "Visceral area"
-897 17 173 131 1 1 1 "Visceral area, layer 1"
-1106 17 173 131 1 1 1 "Visceral area, layer 2/3"
-1010 17 173 131 1 1 1 "Visceral area, layer 4"
-1058 17 173 131 1 1 1 "Visceral area, layer 5"
-857 17 173 131 1 1 1 "Visceral area, layer 6a"
-849 17 173 131 1 1 1 "Visceral area, layer 6b"
-247 1 147 153 1 1 1 "Auditory areas"
-1011 1 147 153 1 1 1 "Dorsal auditory area"
-527 1 147 153 1 1 1 "Dorsal auditory area, layer 1"
-600 1 147 153 1 1 1 "Dorsal auditory area, layer 2/3"
-678 1 147 153 1 1 1 "Dorsal auditory area, layer 4"
-252 1 147 153 1 1 1 "Dorsal auditory area, layer 5"
-156 1 147 153 1 1 1 "Dorsal auditory area, layer 6a"
-243 1 147 153 1 1 1 "Dorsal auditory area, layer 6b"
-480149230 1 147 153 1 1 1 "Laterolateral anterior visual area"
-480149234 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 1"
-480149238 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 2/3"
-480149242 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 4"
-480149246 1 147 153 1 1 1 "Laterolateral anterior visual area,layer 5"
-480149250 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 6a"
-480149254 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 6b"
-1002 1 147 153 1 1 1 "Primary auditory area"
-735 1 147 153 1 1 1 "Primary auditory area, layer 1"
-251 1 147 153 1 1 1 "Primary auditory area, layer 2/3"
-816 1 147 153 1 1 1 "Primary auditory area, layer 4"
-847 1 147 153 1 1 1 "Primary auditory area, layer 5"
-954 1 147 153 1 1 1 "Primary auditory area, layer 6a"
-1005 1 147 153 1 1 1 "Primary auditory area, layer 6b"
-1027 1 147 153 1 1 1 "Posterior auditory area"
-696 1 147 153 1 1 1 "Posterior auditory area, layer 1"
-643 1 147 153 1 1 1 "Posterior auditory area, layer 2/3"
-759 1 147 153 1 1 1 "Posterior auditory area, layer 4"
-791 1 147 153 1 1 1 "Posterior auditory area, layer 5"
-249 1 147 153 1 1 1 "Posterior auditory area, layer 6a"
-456 1 147 153 1 1 1 "Posterior auditory area, layer 6b"
-1018 1 147 153 1 1 1 "Ventral auditory area"
-959 1 147 153 1 1 1 "Ventral auditory area, layer 1"
-755 1 147 153 1 1 1 "Ventral auditory area, layer 2/3"
-990 1 147 153 1 1 1 "Ventral auditory area, layer 4"
-1023 1 147 153 1 1 1 "Ventral auditory area, layer 5"
-520 1 147 153 1 1 1 "Ventral auditory area, layer 6a"
-598 1 147 153 1 1 1 "Ventral auditory area, layer 6b"
-669 8 133 140 1 1 1 "Visual areas"
-801 8 133 140 1 1 1 "Visual areas, layer 1"
-561 8 133 140 1 1 1 "Visual areas, layer 2/3"
-913 8 133 140 1 1 1 "Visual areas, layer 4"
-937 8 133 140 1 1 1 "Visual areas, layer 5"
-457 8 133 140 1 1 1 "Visual areas, layer 6a"
-497 8 133 140 1 1 1 "Visual areas, layer 6b"
-402 8 133 140 1 1 1 "Anterolateral visual area"
-1074 8 133 140 1 1 1 "Anterolateral visual area, layer 1"
-905 8 133 140 1 1 1 "Anterolateral visual area, layer 2/3"
-1114 8 133 140 1 1 1 "Anterolateral visual area, layer 4"
-233 8 133 140 1 1 1 "Anterolateral visual area, layer 5"
-601 8 133 140 1 1 1 "Anterolateral visual area, layer 6a"
-649 8 133 140 1 1 1 "Anterolateral visual area, layer 6b"
-394 8 133 140 1 1 1 "Anteromedial visual area"
-281 8 133 140 1 1 1 "Anteromedial visual area, layer 1"
-1066 8 133 140 1 1 1 "Anteromedial visual area, layer 2/3"
-401 8 133 140 1 1 1 "Anteromedial visual area, layer 4"
-433 8 133 140 1 1 1 "Anteromedial visual area, layer 5"
-1046 8 133 140 1 1 1 "Anteromedial visual area, layer 6a"
-441 8 133 140 1 1 1 "Anteromedial visual area, layer 6b"
-409 8 133 140 1 1 1 "Lateral visual area"
-421 8 133 140 1 1 1 "Lateral visual area, layer 1"
-973 8 133 140 1 1 1 "Lateral visual area, layer 2/3"
-573 8 133 140 1 1 1 "Lateral visual area, layer 4"
-613 8 133 140 1 1 1 "Lateral visual area, layer 5"
-74 8 133 140 1 1 1 "Lateral visual area, layer 6a"
-121 8 133 140 1 1 1 "Lateral visual area, layer 6b"
-385 8 133 140 1 1 1 "Primary visual area"
-593 8 133 140 1 1 1 "Primary visual area, layer 1"
-821 8 133 140 1 1 1 "Primary visual area, layer 2/3"
-721 8 133 140 1 1 1 "Primary visual area, layer 4"
-778 8 133 140 1 1 1 "Primary visual area, layer 5"
-33 8 133 140 1 1 1 "Primary visual area, layer 6a"
-305 8 133 140 1 1 1 "Primary visual area, layer 6b"
-425 8 133 140 1 1 1 "Posterolateral visual area"
-750 8 133 140 1 1 1 "Posterolateral visual area, layer 1"
-269 8 133 140 1 1 1 "Posterolateral visual area, layer 2/3"
-869 8 133 140 1 1 1 "Posterolateral visual area, layer 4"
-902 8 133 140 1 1 1 "Posterolateral visual area, layer 5"
-377 8 133 140 1 1 1 "Posterolateral visual area, layer 6a"
-393 8 133 140 1 1 1 "Posterolateral visual area, layer 6b"
-533 8 133 140 1 1 1 "posteromedial visual area"
-805 8 133 140 1 1 1 "posteromedial visual area, layer 1"
-41 8 133 140 1 1 1 "posteromedial visual area, layer 2/3"
-501 8 133 140 1 1 1 "posteromedial visual area, layer 4"
-565 8 133 140 1 1 1 "posteromedial visual area, layer 5"
-257 8 133 140 1 1 1 "posteromedial visual area, layer 6a"
-469 8 133 140 1 1 1 "posteromedial visual area, layer 6b"
-312782574 8 133 140 1 1 1 "Laterointermediate area"
-312782578 8 133 140 1 1 1 "Laterointermediate area, layer 1"
-312782582 8 133 140 1 1 1 "Laterointermediate area, layer 2/3"
-312782586 8 133 140 1 1 1 "Laterointermediate area, layer 4"
-312782590 8 133 140 1 1 1 "Laterointermediate area, layer 5"
-312782594 8 133 140 1 1 1 "Laterointermediate area, layer 6a"
-312782598 8 133 140 1 1 1 "Laterointermediate area, layer 6b"
-312782628 8 133 140 1 1 1 "Postrhinal area"
-312782632 8 133 140 1 1 1 "Postrhinal area, layer 1"
-312782636 8 133 140 1 1 1 "Postrhinal area, layer 2/3"
-312782640 8 133 140 1 1 1 "Postrhinal area, layer 4"
-312782644 8 133 140 1 1 1 "Postrhinal area, layer 5"
-312782648 8 133 140 1 1 1 "Postrhinal area, layer 6a"
-312782652 8 133 140 1 1 1 "Postrhinal area, layer 6b"
-31 64 166 102 1 1 1 "Anterior cingulate area"
-572 64 166 102 1 1 1 "Anterior cingulate area, layer 1"
-1053 64 166 102 1 1 1 "Anterior cingulate area, layer 2/3"
-739 64 166 102 1 1 1 "Anterior cingulate area, layer 5"
-179 64 166 102 1 1 1 "Anterior cingulate area, layer 6a"
-227 64 166 102 1 1 1 "Anterior cingulate area, layer 6b"
-39 64 166 102 1 1 1 "Anterior cingulate area, dorsal part"
-935 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 1"
-211 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 2/3"
-1015 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 5"
-919 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 6a"
-927 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 6b"
-48 64 166 102 1 1 1 "Anterior cingulate area, ventral part"
-588 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 1"
-296 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 2/3"
-772 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 5"
-810 64 166 102 1 1 1 "Anterior cingulate area, ventral part, 6a"
-819 64 166 102 1 1 1 "Anterior cingulate area, ventral part, 6b"
-972 47 168 80 1 1 1 "Prelimbic area"
-171 47 168 80 1 1 1 "Prelimbic area, layer 1"
-195 47 168 80 1 1 1 "Prelimbic area, layer 2"
-304 47 168 80 1 1 1 "Prelimbic area, layer 2/3"
-363 47 168 80 1 1 1 "Prelimbic area, layer 5"
-84 47 168 80 1 1 1 "Prelimbic area, layer 6a"
-132 47 168 80 1 1 1 "Prelimbic area, layer 6b"
-44 89 179 99 1 1 1 "Infralimbic area"
-707 89 179 99 1 1 1 "Infralimbic area, layer 1"
-747 89 179 99 1 1 1 "Infralimbic area, layer 2"
-556 89 179 99 1 1 1 "Infralimbic area, layer 2/3"
-827 89 179 99 1 1 1 "Infralimbic area, layer 5"
-1054 89 179 99 1 1 1 "Infralimbic area, layer 6a"
-1081 89 179 99 1 1 1 "Infralimbic area, layer 6b"
-714 36 138 94 1 1 1 "Orbital area"
-264 36 138 94 1 1 1 "Orbital area, layer 1"
-492 36 138 94 1 1 1 "Orbital area, layer 2/3"
-352 36 138 94 1 1 1 "Orbital area, layer 5"
-476 36 138 94 1 1 1 "Orbital area, layer 6a"
-516 36 138 94 1 1 1 "Orbital area, layer 6b"
-723 36 138 94 1 1 1 "Orbital area, lateral part"
-448 36 138 94 1 1 1 "Orbital area, lateral part, layer 1"
-412 36 138 94 1 1 1 "Orbital area, lateral part, layer 2/3"
-630 36 138 94 1 1 1 "Orbital area, lateral part, layer 5"
-440 36 138 94 1 1 1 "Orbital area, lateral part, layer 6a"
-488 36 138 94 1 1 1 "Orbital area, lateral part, layer 6b"
-731 36 138 94 1 1 1 "Orbital area, medial part"
-484 36 138 94 1 1 1 "Orbital area, medial part, layer 1"
-524 36 138 94 1 1 1 "Orbital area, medial part, layer 2"
-582 36 138 94 1 1 1 "Orbital area, medial part, layer 2/3"
-620 36 138 94 1 1 1 "Orbital area, medial part, layer 5"
-910 36 138 94 1 1 1 "Orbital area, medial part, layer 6a"
-738 36 138 94 1 1 1 "Orbital area, ventral part"
-746 36 138 94 1 1 1 "Orbital area, ventrolateral part"
-969 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 1"
-288 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 2/3"
-1125 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 5"
-608 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 6a"
-680 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 6b"
-95 33 152 102 1 1 1 "Agranular insular area"
-104 33 152 102 1 1 1 "Agranular insular area, dorsal part"
-996 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 1"
-328 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 2/3"
-1101 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 5"
-783 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 6a"
-831 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 6b"
-111 33 152 102 1 1 1 "Agranular insular area, posterior part"
-120 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 1"
-163 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 2/3"
-344 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 5"
-314 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 6a"
-355 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 6b"
-119 33 152 102 1 1 1 "Agranular insular area, ventral part"
-704 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 1"
-694 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 2/3"
-800 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 5"
-675 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 6a"
-699 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 6b"
-254 26 166 152 1 1 1 "Retrosplenial area"
-894 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part"
-671 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 1"
-965 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 2/3"
-774 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 5"
-906 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 6a"
-279 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 6b"
-480149258 26 166 152 1 1 1 "Mediomedial anterior visual area"
-480149262 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 1"
-480149266 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 2/3"
-480149270 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 4"
-480149274 26 166 152 1 1 1 "Mediomedial anterior visual area,layer 5"
-480149278 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 6a"
-480149282 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 6b"
-480149286 26 166 152 1 1 1 "Mediomedial posterior visual area"
-480149290 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 1"
-480149294 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 2/3"
-480149298 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 4"
-480149302 26 166 152 1 1 1 "Mediomedial posterior visual area,layer 5"
-480149306 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 6a"
-480149310 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 6b"
-480149314 26 166 152 1 1 1 "Medial visual area"
-480149318 26 166 152 1 1 1 "Medial visual area, layer 1"
-480149322 26 166 152 1 1 1 "Medial visual area, layer 2/3"
-480149326 26 166 152 1 1 1 "Medial visual area, layer 4"
-480149330 26 166 152 1 1 1 "Medial visual area,layer 5"
-480149334 26 166 152 1 1 1 "Medial visual area, layer 6a"
-480149338 26 166 152 1 1 1 "Medial visual area, layer 6b"
-879 26 166 152 1 1 1 "Retrosplenial area, dorsal part"
-442 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 1"
-434 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 2/3"
-545 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 4"
-610 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 5"
-274 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 6a"
-330 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 6b"
-886 26 166 152 1 1 1 "Retrosplenial area, ventral part"
-542 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 1"
-606 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 2"
-430 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 2/3"
-687 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 5"
-590 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 6a"
-622 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 6b"
-22 0 159 172 1 1 1 "Posterior parietal association areas"
-532 0 159 172 1 1 1 "Posterior parietal association areas, layer 1"
-241 0 159 172 1 1 1 "Posterior parietal association areas, layer 2/3"
-635 0 159 172 1 1 1 "Posterior parietal association areas, layer 4"
-683 0 159 172 1 1 1 "Posterior parietal association areas, layer 5"
-308 0 159 172 1 1 1 "Posterior parietal association areas, layer 6a"
-340 0 159 172 1 1 1 "Posterior parietal association areas, layer 6b"
-312782546 0 159 172 1 1 1 "Anterior area"
-312782550 0 159 172 1 1 1 "Anterior area, layer 1"
-312782554 0 159 172 1 1 1 "Anterior area, layer 2/3"
-312782558 0 159 172 1 1 1 "Anterior area, layer 4"
-312782562 0 159 172 1 1 1 "Anterior area, layer 5"
-312782566 0 159 172 1 1 1 "Anterior area, layer 6a"
-312782570 0 159 172 1 1 1 "Anterior area, layer 6b"
-417 0 159 172 1 1 1 "Rostrolateral visual area"
-312782604 0 159 172 1 1 1 "Rostrolateral area, layer 1"
-312782608 0 159 172 1 1 1 "Rostrolateral area, layer 2/3"
-312782612 0 159 172 1 1 1 "Rostrolateral area, layer 4"
-312782616 0 159 172 1 1 1 "Rostrolateral area, layer 5"
-312782620 0 159 172 1 1 1 "Rostrolateral area, layer 6a"
-312782624 0 159 172 1 1 1 "Rostrolateral area, layer 6b"
-541 21 176 179 1 1 1 "Temporal association areas"
-97 21 176 179 1 1 1 "Temporal association areas, layer 1"
-1127 21 176 179 1 1 1 "Temporal association areas, layer 2/3"
-234 21 176 179 1 1 1 "Temporal association areas, layer 4"
-289 21 176 179 1 1 1 "Temporal association areas, layer 5"
-729 21 176 179 1 1 1 "Temporal association areas, layer 6a"
-786 21 176 179 1 1 1 "Temporal association areas, layer 6b"
-922 14 150 132 1 1 1 "Perirhinal area"
-335 14 150 132 1 1 1 "Perirhinal area, layer 6a"
-368 14 150 132 1 1 1 "Perirhinal area, layer 6b"
-540 14 150 132 1 1 1 "Perirhinal area, layer 1"
-692 14 150 132 1 1 1 "Perirhinal area, layer 5"
-888 14 150 132 1 1 1 "Perirhinal area, layer 2/3"
-895 13 159 145 1 1 1 "Ectorhinal area"
-836 13 159 145 1 1 1 "Ectorhinal area/Layer 1"
-427 13 159 145 1 1 1 "Ectorhinal area/Layer 2/3"
-988 13 159 145 1 1 1 "Ectorhinal area/Layer 5"
-977 13 159 145 1 1 1 "Ectorhinal area/Layer 6a"
-1045 13 159 145 1 1 1 "Ectorhinal area/Layer 6b"
-698 154 210 189 1 1 1 "Olfactory areas"
-507 154 210 189 1 1 1 "Main olfactory bulb"
-212 130 199 174 1 1 1 "Main olfactory bulb, glomerular layer"
-220 130 199 174 1 1 1 "Main olfactory bulb, granule layer"
-228 154 210 189 1 1 1 "Main olfactory bulb, inner plexiform layer"
-236 130 199 174 1 1 1 "Main olfactory bulb, mitral layer"
-244 154 210 189 1 1 1 "Main olfactory bulb, outer plexiform layer"
-151 157 240 210 1 1 1 "Accessory olfactory bulb"
-188 157 240 210 1 1 1 "Accessory olfactory bulb, glomerular layer"
-196 149 228 200 1 1 1 "Accessory olfactory bulb, granular layer"
-204 157 240 210 1 1 1 "Accessory olfactory bulb, mitral layer"
-159 84 191 148 1 1 1 "Anterior olfactory nucleus"
-167 84 191 148 1 1 1 "Anterior olfactory nucleus, dorsal part"
-175 84 191 148 1 1 1 "Anterior olfactory nucleus, external part"
-183 84 191 148 1 1 1 "Anterior olfactory nucleus, lateral part"
-191 84 191 148 1 1 1 "Anterior olfactory nucleus, medial part"
-199 84 191 148 1 1 1 "Anterior olfactory nucleus, posteroventral part"
-160 84 191 148 1 1 1 "Anterior olfactory nucleus, layer 1"
-168 84 191 148 1 1 1 "Anterior olfactory nucleus, layer 2"
-589 98 208 159 1 1 1 "Taenia tecta"
-597 98 208 159 1 1 1 "Taenia tecta, dorsal part"
-297 98 208 159 1 1 1 "Taenia tecta, dorsal part, layers 1-4"
-1034 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 1"
-1042 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 2"
-1050 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 3"
-1059 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 4"
-605 98 208 159 1 1 1 "Taenia tecta, ventral part"
-306 98 208 159 1 1 1 "Taenia tecta, ventral part, layers 1-3"
-1067 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 1"
-1075 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 2"
-1082 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 3"
-814 164 218 164 1 1 1 "Dorsal peduncular area"
-496 164 218 164 1 1 1 "Dorsal peduncular area, layer 1"
-535 164 218 164 1 1 1 "Dorsal peduncular area, layer 2"
-360 164 218 164 1 1 1 "Dorsal peduncular area, layer 2/3"
-646 164 218 164 1 1 1 "Dorsal peduncular area, layer 5"
-267 164 218 164 1 1 1 "Dorsal peduncular area, layer 6a"
-961 106 203 186 1 1 1 "Piriform area"
-152 106 203 186 1 1 1 "Piriform area, layers 1-3"
-276 106 203 186 1 1 1 "Piriform area, molecular layer"
-284 106 203 186 1 1 1 "Piriform area, pyramidal layer"
-291 106 203 186 1 1 1 "Piriform area, polymorph layer"
-619 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract"
-392 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, layers 1-3"
-260 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, molecular layer"
-268 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, pyramidal layer"
-1139 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, layer 3"
-631 97 231 183 1 1 1 "Cortical amygdalar area"
-639 97 231 183 1 1 1 "Cortical amygdalar area, anterior part"
-192 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 1"
-200 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 2"
-208 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 3"
-647 97 231 183 1 1 1 "Cortical amygdalar area, posterior part"
-655 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone"
-584 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layers 1-2"
-376 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layers 1-3"
-216 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 1"
-224 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 2"
-232 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 3"
-663 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone"
-592 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layers 1-2"
-383 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layers 1-3"
-240 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 1"
-248 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 2"
-256 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 3"
-788 89 218 171 1 1 1 "Piriform-amygdalar area"
-400 89 218 171 1 1 1 "Piriform-amygdalar area, layers 1-3"
-408 89 218 171 1 1 1 "Piriform-amygdalar area, molecular layer"
-416 89 218 171 1 1 1 "Piriform-amygdalar area, pyramidal layer"
-424 89 218 171 1 1 1 "Piriform-amygdalar area, polymorph layer"
-566 168 236 211 1 1 1 "Postpiriform transition area"
-517 168 236 211 1 1 1 "Postpiriform transition area, layers 1-3"
-1140 168 236 211 1 1 1 "Postpiriform transition area, layers 1"
-1141 168 236 211 1 1 1 "Postpiriform transition area, layers 2"
-1142 168 236 211 1 1 1 "Postpiriform transition area, layers 3"
-1089 126 208 75 1 1 1 "Hippocampal formation"
-1080 126 208 75 1 1 1 "Hippocampal region"
-375 126 208 75 1 1 1 "Ammon's horn"
-382 126 208 75 1 1 1 "Field CA1"
-391 126 208 75 1 1 1 "Field CA1, stratum lacunosum-moleculare"
-399 126 208 75 1 1 1 "Field CA1, stratum oriens"
-407 102 168 61 1 1 1 "Field CA1, pyramidal layer"
-415 126 208 75 1 1 1 "Field CA1, stratum radiatum"
-423 126 208 75 1 1 1 "Field CA2"
-431 126 208 75 1 1 1 "Field CA2, stratum lacunosum-moleculare"
-438 126 208 75 1 1 1 "Field CA2, stratum oriens"
-446 102 168 61 1 1 1 "Field CA2, pyramidal layer"
-454 126 208 75 1 1 1 "Field CA2, stratum radiatum"
-463 126 208 75 1 1 1 "Field CA3"
-471 126 208 75 1 1 1 "Field CA3, stratum lacunosum-moleculare"
-479 126 208 75 1 1 1 "Field CA3, stratum lucidum"
-486 126 208 75 1 1 1 "Field CA3, stratum oriens"
-495 102 168 61 1 1 1 "Field CA3, pyramidal layer"
-504 126 208 75 1 1 1 "Field CA3, stratum radiatum"
-726 126 208 75 1 1 1 "Dentate gyrus"
-10703 126 208 75 1 1 1 "Dentate gyrus, molecular layer"
-10704 126 208 75 1 1 1 "Dentate gyrus, polymorph layer"
-632 102 168 61 1 1 1 "Dentate gyrus, granule cell layer"
-10702 126 208 75 1 1 1 "Dentate gyrus, subgranular zone"
-734 126 208 75 1 1 1 "Dentate gyrus crest"
-742 126 208 75 1 1 1 "Dentate gyrus crest, molecular layer"
-751 126 208 75 1 1 1 "Dentate gyrus crest, polymorph layer"
-758 126 208 75 1 1 1 "Dentate gyrus crest, granule cell layer"
-766 126 208 75 1 1 1 "Dentate gyrus lateral blade"
-775 126 208 75 1 1 1 "Dentate gyrus lateral blade, molecular layer"
-782 126 208 75 1 1 1 "Dentate gyrus lateral blade, polymorph layer"
-790 126 208 75 1 1 1 "Dentate gyrus lateral blade, granule cell layer"
-799 126 208 75 1 1 1 "Dentate gyrus medial blade"
-807 126 208 75 1 1 1 "Dentate gyrus medial blade, molecular layer"
-815 126 208 75 1 1 1 "Dentate gyrus medial blade, polymorph layer"
-823 126 208 75 1 1 1 "Dentate gyrus medial blade, granule cell layer"
-982 126 208 75 1 1 1 "Fasciola cinerea"
-19 126 208 75 1 1 1 "Induseum griseum"
-822 50 184 37 1 1 1 "Retrohippocampal region"
-909 50 184 37 1 1 1 "Entorhinal area"
-918 50 184 37 1 1 1 "Entorhinal area, lateral part"
-1121 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 1"
-20 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2"
-999 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2/3"
-715 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2a"
-764 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2b"
-52 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 3"
-92 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 4"
-312 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 4/5"
-139 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 5"
-387 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 5/6"
-28 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 6a"
-60 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 6b"
-926 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone"
-526 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 1"
-543 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2"
-468 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2a"
-508 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2b"
-664 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 3"
-712 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 4"
-727 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 5"
-550 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 5/6"
-743 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 6"
-934 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone"
-259 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 1"
-324 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 2"
-371 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 3"
-419 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 4"
-1133 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 5/6"
-843 114 213 105 1 1 1 "Parasubiculum"
-10693 114 213 105 1 1 1 "Parasubiculum, layer 1"
-10694 114 213 105 1 1 1 "Parasubiculum, layer 2"
-10695 114 213 105 1 1 1 "Parasubiculum, layer 3"
-1037 72 200 60 1 1 1 "Postsubiculum"
-10696 72 200 60 1 1 1 "Postsubiculum, layer 1"
-10697 72 200 60 1 1 1 "Postsubiculum, layer 2"
-10698 72 200 60 1 1 1 "Postsubiculum, layer 3"
-1084 89 185 71 1 1 1 "Presubiculum"
-10699 89 185 71 1 1 1 "Presubiculum, layer 1"
-10700 89 185 71 1 1 1 "Presubiculum, layer 2"
-10701 89 185 71 1 1 1 "Presubiculum, layer 3"
-502 79 194 68 1 1 1 "Subiculum"
-509 79 194 68 1 1 1 "Subiculum, dorsal part"
-829 79 194 68 1 1 1 "Subiculum, dorsal part, molecular layer"
-845 75 181 71 1 1 1 "Subiculum, dorsal part, pyramidal layer"
-837 79 194 68 1 1 1 "Subiculum, dorsal part, stratum radiatum"
-518 79 194 68 1 1 1 "Subiculum, ventral part"
-853 79 194 68 1 1 1 "Subiculum, ventral part, molecular layer"
-870 75 181 71 1 1 1 "Subiculum, ventral part, pyramidal layer"
-861 79 194 68 1 1 1 "Subiculum, ventral part, stratum radiatum"
-484682470 88 186 72 1 1 1 "Prosubiculum"
-484682475 88 186 72 1 1 1 "Prosubiculum, dorsal part"
-484682479 88 186 72 1 1 1 "Prosubiculum, dorsal part, molecular layer"
-484682483 86 184 75 1 1 1 "Prosubiculum, dorsal part, pyramidal layer"
-484682487 88 186 72 1 1 1 "Prosubiculum, dorsal part, stratum radiatum"
-484682492 88 186 72 1 1 1 "Prosubiculum, ventral part"
-484682496 88 186 72 1 1 1 "Prosubiculum, ventral part, molecular layer"
-484682500 86 184 75 1 1 1 "Prosubiculum, ventral part, pyramidal layer"
-484682504 88 186 72 1 1 1 "Prosubiculum, ventral part, stratum radiatum"
-484682508 51 185 50 1 1 1 "Area prostriata"
-703 138 218 135 1 1 1 "Cortical subplate"
-16 138 218 135 1 1 1 "Layer 6b, isocortex"
-583 138 218 135 1 1 1 "Claustrum"
-942 160 238 157 1 1 1 "Endopiriform nucleus"
-952 160 238 157 1 1 1 "Endopiriform nucleus, dorsal part"
-966 160 238 157 1 1 1 "Endopiriform nucleus, ventral part"
-131 144 235 141 1 1 1 "Lateral amygdalar nucleus"
-295 157 231 156 1 1 1 "Basolateral amygdalar nucleus"
-303 157 231 156 1 1 1 "Basolateral amygdalar nucleus, anterior part"
-311 157 231 156 1 1 1 "Basolateral amygdalar nucleus, posterior part"
-451 157 231 156 1 1 1 "Basolateral amygdalar nucleus, ventral part"
-319 132 234 129 1 1 1 "Basomedial amygdalar nucleus"
-327 132 234 129 1 1 1 "Basomedial amygdalar nucleus, anterior part"
-334 132 234 129 1 1 1 "Basomedial amygdalar nucleus, posterior part"
-780 151 236 147 1 1 1 "Posterior amygdalar nucleus"
-623 152 214 249 1 1 1 "Cerebral nuclei"
-477 152 214 249 1 1 1 "Striatum"
-485 152 214 249 1 1 1 "Striatum dorsal region"
-672 152 214 249 1 1 1 "Caudoputamen"
-493 128 205 248 1 1 1 "Striatum ventral region"
-56 128 205 248 1 1 1 "Nucleus accumbens"
-998 128 205 248 1 1 1 "Fundus of striatum"
-754 128 205 248 1 1 1 "Olfactory tubercle"
-481 128 205 248 1 1 1 "Islands of Calleja"
-489 128 205 248 1 1 1 "Major island of Calleja"
-144 128 205 248 1 1 1 "Olfactory tubercle, layers 1-3"
-458 128 205 248 1 1 1 "Olfactory tubercle, molecular layer"
-465 128 205 248 1 1 1 "Olfactory tubercle, pyramidal layer"
-473 128 205 248 1 1 1 "Olfactory tubercle, polymorph layer"
-275 144 203 237 1 1 1 "Lateral septal complex"
-242 144 203 237 1 1 1 "Lateral septal nucleus"
-250 144 203 237 1 1 1 "Lateral septal nucleus, caudal (caudodorsal) part"
-258 144 203 237 1 1 1 "Lateral septal nucleus, rostral (rostroventral) part"
-266 144 203 237 1 1 1 "Lateral septal nucleus, ventral part"
-310 144 203 237 1 1 1 "Septofimbrial nucleus"
-333 144 203 237 1 1 1 "Septohippocampal nucleus"
-278 128 192 226 1 1 1 "Striatum-like amygdalar nuclei"
-23 128 192 226 1 1 1 "Anterior amygdalar area"
-292 128 192 226 1 1 1 "Bed nucleus of the accessory olfactory tract"
-536 128 192 226 1 1 1 "Central amygdalar nucleus"
-544 128 192 226 1 1 1 "Central amygdalar nucleus, capsular part"
-551 128 192 226 1 1 1 "Central amygdalar nucleus, lateral part"
-559 128 192 226 1 1 1 "Central amygdalar nucleus, medial part"
-1105 128 192 226 1 1 1 "Intercalated amygdalar nucleus"
-403 128 192 226 1 1 1 "Medial amygdalar nucleus"
-411 128 192 226 1 1 1 "Medial amygdalar nucleus, anterodorsal part"
-418 128 192 226 1 1 1 "Medial amygdalar nucleus, anteroventral part"
-426 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part"
-472 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer a"
-480 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer b"
-487 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer c"
-435 128 192 226 1 1 1 "Medial amygdalar nucleus, posteroventral part"
-803 133 153 204 1 1 1 "Pallidum"
-818 133 153 204 1 1 1 "Pallidum, dorsal region"
-1022 133 153 204 1 1 1 "Globus pallidus, external segment"
-1031 133 153 204 1 1 1 "Globus pallidus, internal segment"
-835 162 177 216 1 1 1 "Pallidum, ventral region"
-342 162 177 216 1 1 1 "Substantia innominata"
-298 162 177 216 1 1 1 "Magnocellular nucleus"
-826 150 167 211 1 1 1 "Pallidum, medial region"
-904 150 167 211 1 1 1 "Medial septal complex"
-564 150 167 211 1 1 1 "Medial septal nucleus"
-596 150 167 211 1 1 1 "Diagonal band nucleus"
-581 150 167 211 1 1 1 "Triangular nucleus of septum"
-809 179 192 223 1 1 1 "Pallidum, caudal region"
-351 179 192 223 1 1 1 "Bed nuclei of the stria terminalis"
-359 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division"
-537 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, anterolateral area"
-498 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, anteromedial area"
-505 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus"
-513 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, fusiform nucleus"
-546 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus"
-521 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus"
-554 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, oval nucleus"
-562 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus"
-529 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, ventral nucleus"
-367 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division"
-569 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, dorsal nucleus"
-578 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, principal nucleus"
-585 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus"
-594 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, transverse nucleus"
-602 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, strial extension"
-287 179 192 223 1 1 1 "Bed nucleus of the anterior commissure"
-343 255 112 128 1 1 1 "Brain stem"
-1129 255 112 128 1 1 1 "Interbrain"
-549 255 112 128 1 1 1 "Thalamus"
-864 255 128 132 1 1 1 "Thalamus, sensory-motor cortex related"
-637 255 128 132 1 1 1 "Ventral group of the dorsal thalamus"
-629 255 128 132 1 1 1 "Ventral anterior-lateral complex of the thalamus"
-685 255 128 132 1 1 1 "Ventral medial nucleus of the thalamus"
-709 255 128 132 1 1 1 "Ventral posterior complex of the thalamus"
-718 255 128 132 1 1 1 "Ventral posterolateral nucleus of the thalamus"
-725 255 128 132 1 1 1 "Ventral posterolateral nucleus of the thalamus, parvicellular part"
-733 255 128 132 1 1 1 "Ventral posteromedial nucleus of the thalamus"
-741 255 128 132 1 1 1 "Ventral posteromedial nucleus of the thalamus, parvicellular part"
-406 255 128 132 1 1 1 "Subparafascicular nucleus"
-414 255 128 132 1 1 1 "Subparafascicular nucleus, magnocellular part"
-422 255 128 132 1 1 1 "Subparafascicular nucleus, parvicellular part"
-609 255 128 132 1 1 1 "Subparafascicular area"
-1044 255 128 132 1 1 1 "Peripeduncular nucleus"
-1008 255 128 132 1 1 1 "Geniculate group, dorsal thalamus"
-475 255 128 132 1 1 1 "Medial geniculate complex"
-1072 255 128 132 1 1 1 "Medial geniculate complex, dorsal part"
-1079 255 128 132 1 1 1 "Medial geniculate complex, ventral part"
-1088 255 128 132 1 1 1 "Medial geniculate complex, medial part"
-170 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex"
-496345664 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, shell"
-496345668 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, core"
-496345672 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, ipsilateral zone"
-856 255 144 159 1 1 1 "Thalamus, polymodal association cortex related"
-138 255 144 159 1 1 1 "Lateral group of the dorsal thalamus"
-218 255 144 159 1 1 1 "Lateral posterior nucleus of the thalamus"
-1020 255 144 159 1 1 1 "Posterior complex of the thalamus"
-1029 255 144 159 1 1 1 "Posterior limiting nucleus of the thalamus"
-325 255 144 159 1 1 1 "Suprageniculate nucleus"
-239 255 144 159 1 1 1 "Anterior group of the dorsal thalamus"
-255 255 144 159 1 1 1 "Anteroventral nucleus of thalamus"
-127 255 144 159 1 1 1 "Anteromedial nucleus"
-1096 255 144 159 1 1 1 "Anteromedial nucleus, dorsal part"
-1104 255 144 159 1 1 1 "Anteromedial nucleus, ventral part"
-64 255 144 159 1 1 1 "Anterodorsal nucleus"
-1120 255 144 159 1 1 1 "Interanteromedial nucleus of the thalamus"
-1113 255 144 159 1 1 1 "Interanterodorsal nucleus of the thalamus"
-155 255 144 159 1 1 1 "Lateral dorsal nucleus of thalamus"
-444 255 144 159 1 1 1 "Medial group of the dorsal thalamus"
-59 255 144 159 1 1 1 "Intermediodorsal nucleus of the thalamus"
-362 255 144 159 1 1 1 "Mediodorsal nucleus of thalamus"
-617 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, central part"
-626 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, lateral part"
-636 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, medial part"
-366 255 144 159 1 1 1 "Submedial nucleus of the thalamus"
-1077 255 144 159 1 1 1 "Perireunensis nucleus"
-571 255 144 159 1 1 1 "Midline group of the dorsal thalamus"
-149 255 144 159 1 1 1 "Paraventricular nucleus of the thalamus"
-15 255 144 159 1 1 1 "Parataenial nucleus"
-181 255 144 159 1 1 1 "Nucleus of reunions"
-51 255 144 159 1 1 1 "Intralaminar nuclei of the dorsal thalamus"
-189 255 144 159 1 1 1 "Rhomboid nucleus"
-599 255 144 159 1 1 1 "Central medial nucleus of the thalamus"
-907 255 144 159 1 1 1 "Paracentral nucleus"
-575 255 144 159 1 1 1 "Central lateral nucleus of the thalamus"
-930 255 144 159 1 1 1 "Parafascicular nucleus"
-262 255 144 159 1 1 1 "Reticular nucleus of the thalamus"
-1014 255 144 159 1 1 1 "Geniculate group, ventral thalamus"
-27 255 144 159 1 1 1 "Intergeniculate leaflet of the lateral geniculate complex"
-178 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex"
-300 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex, lateral zone"
-316 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex, medial zone"
-321 255 144 159 1 1 1 "Subgeniculate nucleus"
-958 255 144 159 1 1 1 "Epithalamus"
-483 255 144 159 1 1 1 "Medial habenula"
-186 255 144 159 1 1 1 "Lateral habenula"
-953 255 144 159 1 1 1 "Pineal body"
-1097 230 68 56 1 1 1 "Hypothalamus"
-157 255 93 80 1 1 1 "Periventricular zone"
-390 255 93 80 1 1 1 "Supraoptic nucleus"
-332 255 93 80 1 1 1 "Accessory supraoptic group"
-432 255 93 80 1 1 1 "Nucleus circularis"
-38 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus"
-71 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division"
-47 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part"
-79 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part"
-103 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part"
-652 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone"
-660 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, medial zone"
-94 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division"
-55 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, anterior parvicellular part"
-87 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone"
-110 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, periventricular part"
-30 255 93 80 1 1 1 "Periventricular hypothalamic nucleus, anterior part"
-118 255 93 80 1 1 1 "Periventricular hypothalamic nucleus, intermediate part"
-223 255 93 80 1 1 1 "Arcuate hypothalamic nucleus"
-141 255 85 71 1 1 1 "Periventricular region"
-72 255 85 71 1 1 1 "Anterodorsal preoptic nucleus"
-80 255 85 71 1 1 1 "Anterior hypothalamic area"
-263 255 85 71 1 1 1 "Anteroventral preoptic nucleus"
-272 255 85 71 1 1 1 "Anteroventral periventricular nucleus"
-830 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus"
-668 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, anterior part"
-676 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, posterior part"
-684 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, ventral part"
-452 255 85 71 1 1 1 "Median preoptic nucleus"
-523 255 85 71 1 1 1 "Medial preoptic area"
-763 255 85 71 1 1 1 "Vascular organ of the lamina terminalis"
-914 255 85 71 1 1 1 "Posterodorsal preoptic nucleus"
-1109 255 85 71 1 1 1 "Parastrial nucleus"
-1124 255 85 71 1 1 1 "Suprachiasmatic preoptic nucleus"
-126 255 85 71 1 1 1 "Periventricular hypothalamic nucleus, posterior part"
-133 255 85 71 1 1 1 "Periventricular hypothalamic nucleus, preoptic part"
-347 255 85 71 1 1 1 "Subparaventricular zone"
-286 255 85 71 1 1 1 "Suprachiasmatic nucleus"
-338 255 85 71 1 1 1 "Subfornical organ"
-689 255 85 71 1 1 1 "Ventrolateral preoptic nucleus"
-467 255 76 62 1 1 1 "Hypothalamic medial zone"
-88 255 76 62 1 1 1 "Anterior hypothalamic nucleus"
-700 255 76 62 1 1 1 "Anterior hypothalamic nucleus, anterior part"
-708 255 76 62 1 1 1 "Anterior hypothalamic nucleus, central part"
-716 255 76 62 1 1 1 "Anterior hypothalamic nucleus, dorsal part"
-724 255 76 62 1 1 1 "Anterior hypothalamic nucleus, posterior part"
-331 255 76 62 1 1 1 "Mammillary body"
-210 255 76 62 1 1 1 "Lateral mammillary nucleus"
-491 255 76 62 1 1 1 "Medial mammillary nucleus"
-732 255 76 62 1 1 1 "Medial mammillary nucleus, median part"
-525 255 76 62 1 1 1 "Supramammillary nucleus"
-1110 255 76 62 1 1 1 "Supramammillary nucleus, lateral part"
-1118 255 76 62 1 1 1 "Supramammillary nucleus, medial part"
-557 255 76 62 1 1 1 "Tuberomammillary nucleus"
-1126 255 76 62 1 1 1 "Tuberomammillary nucleus, dorsal part"
-1 255 76 62 1 1 1 "Tuberomammillary nucleus, ventral part"
-515 255 76 62 1 1 1 "Medial preoptic nucleus"
-740 255 76 62 1 1 1 "Medial preoptic nucleus, central part"
-748 255 76 62 1 1 1 "Medial preoptic nucleus, lateral part"
-756 255 76 62 1 1 1 "Medial preoptic nucleus, medial part"
-980 255 76 62 1 1 1 "Dorsal premammillary nucleus"
-1004 255 76 62 1 1 1 "Ventral premammillary nucleus"
-63 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division"
-439 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part"
-447 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, forniceal part"
-455 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, lateral parvicellular part"
-464 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone"
-693 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus"
-761 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, anterior part"
-769 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, central part"
-777 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, dorsomedial part"
-785 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, ventrolateral part"
-946 255 76 62 1 1 1 "Posterior hypothalamic nucleus"
-290 242 72 59 1 1 1 "Hypothalamic lateral zone"
-194 242 72 59 1 1 1 "Lateral hypothalamic area"
-226 242 72 59 1 1 1 "Lateral preoptic area"
-356 242 72 59 1 1 1 "Preparasubthalamic nucleus"
-364 242 72 59 1 1 1 "Parasubthalamic nucleus"
-173 242 72 59 1 1 1 "Retrochiasmatic area"
-470 242 72 59 1 1 1 "Subthalamic nucleus"
-614 242 72 59 1 1 1 "Tuberal nucleus"
-797 242 72 59 1 1 1 "Zona incerta"
-796 242 72 59 1 1 1 "Dopaminergic A13 group"
-804 242 72 59 1 1 1 "Fields of Forel"
-10671 242 72 59 1 1 1 "Median eminence"
-313 255 100 255 1 1 1 "Midbrain"
-339 255 122 255 1 1 1 "Midbrain, sensory related"
-302 255 122 255 1 1 1 "Superior colliculus, sensory related"
-851 255 122 255 1 1 1 "Superior colliculus, optic layer"
-842 255 122 255 1 1 1 "Superior colliculus, superficial gray layer"
-834 255 122 255 1 1 1 "Superior colliculus, zonal layer"
-4 255 122 255 1 1 1 "Inferior colliculus"
-811 255 122 255 1 1 1 "Inferior colliculus, central nucleus"
-820 255 122 255 1 1 1 "Inferior colliculus, dorsal nucleus"
-828 255 122 255 1 1 1 "Inferior colliculus, external nucleus"
-580 255 122 255 1 1 1 "Nucleus of the brachium of the inferior colliculus"
-271 255 122 255 1 1 1 "Nucleus sagulum"
-874 255 122 255 1 1 1 "Parabigeminal nucleus"
-460 255 122 255 1 1 1 "Midbrain trigeminal nucleus"
-323 255 144 255 1 1 1 "Midbrain, motor related"
-381 255 144 255 1 1 1 "Substantia nigra, reticular part"
-749 255 144 255 1 1 1 "Ventral tegmental area"
-246 255 144 255 1 1 1 "Midbrain reticular nucleus, retrorubral area"
-128 255 144 255 1 1 1 "Midbrain reticular nucleus"
-539 255 144 255 1 1 1 "Midbrain reticular nucleus, magnocellular part"
-548 255 144 255 1 1 1 "Midbrain reticular nucleus, magnocellular part, general"
-555 255 144 255 1 1 1 "Midbrain reticular nucleus, parvicellular part"
-294 255 144 255 1 1 1 "Superior colliculus, motor related"
-26 255 144 255 1 1 1 "Superior colliculus, motor related, deep gray layer"
-42 255 144 255 1 1 1 "Superior colliculus, motor related, deep white layer"
-17 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate white layer"
-10 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer"
-494 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer a"
-503 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer b"
-511 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer c"
-795 255 144 255 1 1 1 "Periaqueductal gray"
-50 255 144 255 1 1 1 "Precommissural nucleus"
-67 255 144 255 1 1 1 "Interstitial nucleus of Cajal"
-587 255 144 255 1 1 1 "Nucleus of Darkschewitsch"
-1100 255 144 255 1 1 1 "Pretectal region"
-215 255 144 255 1 1 1 "Anterior pretectal nucleus"
-531 255 144 255 1 1 1 "Medial pretectal area"
-628 255 144 255 1 1 1 "Nucleus of the optic tract"
-634 255 144 255 1 1 1 "Nucleus of the posterior commissure"
-706 255 144 255 1 1 1 "Olivary pretectal nucleus"
-1061 255 144 255 1 1 1 "Posterior pretectal nucleus"
-616 255 144 255 1 1 1 "Cuneiform nucleus"
-214 255 144 255 1 1 1 "Red nucleus"
-35 255 144 255 1 1 1 "Oculomotor nucleus"
-975 255 144 255 1 1 1 "Edinger-Westphal nucleus"
-115 255 144 255 1 1 1 "Trochlear nucleus"
-757 255 144 255 1 1 1 "Ventral tegmental nucleus"
-231 255 144 255 1 1 1 "Anterior tegmental nucleus"
-66 255 144 255 1 1 1 "Lateral terminal nucleus of the accessory optic tract"
-75 255 144 255 1 1 1 "Dorsal terminal nucleus of the accessory optic tract"
-58 255 144 255 1 1 1 "Medial terminal nucleus of the accessory optic tract"
-615 255 144 255 1 1 1 "Substantia nigra, lateral part"
-348 255 144 255 1 1 1 "Midbrain, behavioral state related"
-374 255 166 255 1 1 1 "Substantia nigra, compact part"
-1052 255 166 255 1 1 1 "Pedunculopontine nucleus"
-165 255 166 255 1 1 1 "Midbrain raphe nuclei"
-12 255 166 255 1 1 1 "Interfascicular nucleus raphe"
-100 255 166 255 1 1 1 "Interpeduncular nucleus"
-197 255 166 255 1 1 1 "Rostral linear nucleus raphe"
-591 255 166 255 1 1 1 "Central linear nucleus raphe"
-872 255 166 255 1 1 1 "Dorsal nucleus raphe"
-1065 255 155 136 1 1 1 "Hindbrain"
-771 255 155 136 1 1 1 "Pons"
-1132 255 174 111 1 1 1 "Pons, sensory related"
-612 255 174 111 1 1 1 "Nucleus of the lateral lemniscus"
-82 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, dorsal part"
-90 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, horizontal part"
-99 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, ventral part"
-7 255 174 111 1 1 1 "Principal sensory nucleus of the trigeminal"
-867 255 174 111 1 1 1 "Parabrachial nucleus"
-123 255 174 111 1 1 1 "Koelliker-Fuse subnucleus"
-881 255 174 111 1 1 1 "Parabrachial nucleus, lateral division"
-860 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, central lateral part"
-868 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, dorsal lateral part"
-875 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, external lateral part"
-883 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, superior lateral part"
-891 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, ventral lateral part"
-890 255 174 111 1 1 1 "Parabrachial nucleus, medial division"
-899 255 174 111 1 1 1 "Parabrachial nucleus, medial division, external medial part"
-915 255 174 111 1 1 1 "Parabrachial nucleus, medial division, medial medial part"
-923 255 174 111 1 1 1 "Parabrachial nucleus, medial division, ventral medial part"
-398 255 174 111 1 1 1 "Superior olivary complex"
-122 255 174 111 1 1 1 "Superior olivary complex, periolivary region"
-105 255 174 111 1 1 1 "Superior olivary complex, medial part"
-114 255 174 111 1 1 1 "Superior olivary complex, lateral part"
-987 255 186 134 1 1 1 "Pons, motor related"
-280 255 186 134 1 1 1 "Barrington's nucleus"
-880 255 186 134 1 1 1 "Dorsal tegmental nucleus"
-283 255 186 134 1 1 1 "Lateral tegmental nucleus"
-898 255 186 134 1 1 1 "Pontine central gray"
-931 255 186 134 1 1 1 "Pontine gray"
-1093 255 186 134 1 1 1 "Pontine reticular nucleus, caudal part"
-552 255 186 134 1 1 1 "Pontine reticular nucleus, ventral part"
-318 255 186 134 1 1 1 "Supragenual nucleus"
-462 255 186 134 1 1 1 "Superior salivatory nucleus"
-534 255 186 134 1 1 1 "Supratrigeminal nucleus"
-574 255 186 134 1 1 1 "Tegmental reticular nucleus"
-621 255 186 134 1 1 1 "Motor nucleus of trigeminal"
-1117 255 195 149 1 1 1 "Pons, behavioral state related"
-679 255 195 149 1 1 1 "Superior central nucleus raphe"
-137 255 195 149 1 1 1 "Superior central nucleus raphe, lateral part"
-130 255 195 149 1 1 1 "Superior central nucleus raphe, medial part"
-147 255 195 149 1 1 1 "Locus ceruleus"
-162 255 195 149 1 1 1 "Laterodorsal tegmental nucleus"
-604 255 195 149 1 1 1 "Nucleus incertus"
-146 255 195 149 1 1 1 "Pontine reticular nucleus"
-238 255 195 149 1 1 1 "Nucleus raphe pontis"
-350 255 195 149 1 1 1 "Subceruleus nucleus"
-358 255 195 149 1 1 1 "Sublaterodorsal nucleus"
-354 255 155 205 1 1 1 "Medulla"
-386 255 165 210 1 1 1 "Medulla, sensory related"
-207 255 165 210 1 1 1 "Area postrema"
-607 255 165 210 1 1 1 "Cochlear nuclei"
-112 255 165 210 1 1 1 "Granular lamina of the cochlear nuclei"
-560 255 165 210 1 1 1 "Cochlear nucleus, subpedunclular granular region"
-96 255 165 210 1 1 1 "Dorsal cochlear nucleus"
-101 255 165 210 1 1 1 "Ventral cochlear nucleus"
-720 255 165 210 1 1 1 "Dorsal column nuclei"
-711 255 165 210 1 1 1 "Cuneate nucleus"
-1039 255 165 210 1 1 1 "Gracile nucleus"
-903 255 165 210 1 1 1 "External cuneate nucleus"
-642 255 165 210 1 1 1 "Nucleus of the trapezoid body"
-651 255 165 210 1 1 1 "Nucleus of the solitary tract"
-659 255 165 210 1 1 1 "Nucleus of the solitary tract, central part"
-666 255 165 210 1 1 1 "Nucleus of the solitary tract, commissural part"
-674 255 165 210 1 1 1 "Nucleus of the solitary tract, gelatinous part"
-682 255 165 210 1 1 1 "Nucleus of the solitary tract, lateral part"
-691 255 165 210 1 1 1 "Nucleus of the solitary tract, medial part"
-429 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, caudal part"
-437 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, interpolar part"
-445 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part"
-77 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, caudal dorsomedial part"
-53 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, dorsal zone"
-61 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone"
-45 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part"
-69 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, ventrolateral part"
-789 255 165 210 1 1 1 "Nucleus z"
-370 255 179 217 1 1 1 "Medulla, motor related"
-653 255 179 217 1 1 1 "Abducens nucleus"
-568 255 179 217 1 1 1 "Accessory abducens nucleus"
-661 255 179 217 1 1 1 "Facial motor nucleus"
-576 255 179 217 1 1 1 "Accessory facial motor nucleus"
-640 255 179 217 1 1 1 "Efferent vestibular nucleus"
-135 255 179 217 1 1 1 "Nucleus ambiguus"
-939 255 179 217 1 1 1 "Nucleus ambiguus, dorsal division"
-143 255 179 217 1 1 1 "Nucleus ambiguus, ventral division"
-839 255 179 217 1 1 1 "Dorsal motor nucleus of the vagus nerve"
-887 255 179 217 1 1 1 "Efferent cochlear group"
-1048 255 179 217 1 1 1 "Gigantocellular reticular nucleus"
-372 255 179 217 1 1 1 "Infracerebellar nucleus"
-83 255 179 217 1 1 1 "Inferior olivary complex"
-136 255 179 217 1 1 1 "Intermediate reticular nucleus"
-106 255 179 217 1 1 1 "Inferior salivatory nucleus"
-203 255 179 217 1 1 1 "Linear nucleus of the medulla"
-235 255 179 217 1 1 1 "Lateral reticular nucleus"
-955 255 179 217 1 1 1 "Lateral reticular nucleus, magnocellular part"
-963 255 179 217 1 1 1 "Lateral reticular nucleus, parvicellular part"
-307 255 179 217 1 1 1 "Magnocellular reticular nucleus"
-395 255 179 217 1 1 1 "Medullary reticular nucleus"
-1098 255 179 217 1 1 1 "Medullary reticular nucleus, dorsal part"
-1107 255 179 217 1 1 1 "Medullary reticular nucleus, ventral part"
-852 255 179 217 1 1 1 "Parvicellular reticular nucleus"
-859 255 179 217 1 1 1 "Parasolitary nucleus"
-938 255 179 217 1 1 1 "Paragigantocellular reticular nucleus"
-970 255 179 217 1 1 1 "Paragigantocellular reticular nucleus, dorsal part"
-978 255 179 217 1 1 1 "Paragigantocellular reticular nucleus, lateral part"
-154 255 179 217 1 1 1 "Perihypoglossal nuclei"
-161 255 179 217 1 1 1 "Nucleus intercalatus"
-177 255 179 217 1 1 1 "Nucleus of Roller"
-169 255 179 217 1 1 1 "Nucleus prepositus"
-995 255 179 217 1 1 1 "Paramedian reticular nucleus"
-1069 255 179 217 1 1 1 "Parapyramidal nucleus"
-185 255 179 217 1 1 1 "Parapyramidal nucleus, deep part"
-193 255 179 217 1 1 1 "Parapyramidal nucleus, superficial part"
-701 255 179 217 1 1 1 "Vestibular nuclei"
-209 255 179 217 1 1 1 "Lateral vestibular nucleus"
-202 255 179 217 1 1 1 "Medial vestibular nucleus"
-225 255 179 217 1 1 1 "Spinal vestibular nucleus"
-217 255 179 217 1 1 1 "Superior vestibular nucleus"
-765 255 179 217 1 1 1 "Nucleus x"
-773 255 179 217 1 1 1 "Hypoglossal nucleus"
-781 255 179 217 1 1 1 "Nucleus y"
-76 255 179 217 1 1 1 "Interstitial nucleus of the vestibular nerve"
-379 255 198 226 1 1 1 "Medulla, behavioral state related"
-206 255 198 226 1 1 1 "Nucleus raphe magnus"
-230 255 198 226 1 1 1 "Nucleus raphe pallidus"
-222 255 198 226 1 1 1 "Nucleus raphe obscurus"
-512 240 240 128 1 1 1 "Cerebellum"
-528 240 240 128 1 1 1 "Cerebellar cortex"
-645 255 252 145 1 1 1 "Vermal regions"
-912 255 252 145 1 1 1 "Lingula (I)"
-10707 255 252 145 1 1 1 "Lingula (I), molecular layer"
-10706 255 252 145 1 1 1 "Lingula (I), Purkinje layer"
-10705 236 231 84 1 1 1 "Lingula (I), granular layer"
-920 255 252 145 1 1 1 "Central lobule"
-976 255 252 145 1 1 1 "Lobule II"
-10710 255 252 145 1 1 1 "Lobule II, molecular layer"
-10709 255 252 145 1 1 1 "Lobule II, Purkinje layer"
-10708 236 231 84 1 1 1 "Lobule II, granular layer"
-984 255 252 145 1 1 1 "Lobule III"
-10713 255 252 145 1 1 1 "Lobule III, molecular layer"
-10712 255 252 145 1 1 1 "Lobule III, Purkinje layer"
-10711 236 231 84 1 1 1 "Lobule III, granular layer"
-928 255 252 145 1 1 1 "Culmen"
-992 255 252 145 1 1 1 "Lobule IV"
-10716 255 252 145 1 1 1 "Lobule IV, molecular layer"
-10715 255 252 145 1 1 1 "Lobule IV, Purkinje layer"
-10714 236 231 84 1 1 1 "Lobule IV, granular layer"
-1001 255 252 145 1 1 1 "Lobule V"
-10719 255 252 145 1 1 1 "Lobule V, molecular layer"
-10718 255 252 145 1 1 1 "Lobule V, Purkinje layer"
-10717 236 231 84 1 1 1 "Lobule V, granular layer"
-1091 255 252 145 1 1 1 "Lobules IV-V"
-10722 255 252 145 1 1 1 "Lobules IV-V, molecular layer"
-10721 255 252 145 1 1 1 "Lobules IV-V, Purkinje layer"
-10720 236 231 84 1 1 1 "Lobules IV-V, granular layer"
-936 255 252 145 1 1 1 "Declive (VI)"
-10725 255 252 145 1 1 1 "Declive (VI), molecular layer"
-10724 255 252 145 1 1 1 "Declive (VI), Purkinje layer"
-10723 236 231 84 1 1 1 "Declive (VI), granular layer"
-944 255 252 145 1 1 1 "Folium-tuber vermis (VII)"
-10728 255 252 145 1 1 1 "Folium-tuber vermis (VII), molecular layer"
-10727 255 252 145 1 1 1 "Folium-tuber vermis (VII), Purkinje layer"
-10726 236 231 84 1 1 1 "Folium-tuber vermis (VII), granular layer"
-951 255 252 145 1 1 1 "Pyramus (VIII)"
-10731 255 252 145 1 1 1 "Pyramus (VIII), molecular layer"
-10730 255 252 145 1 1 1 "Pyramus (VIII), Purkinje layer"
-10729 236 231 84 1 1 1 "Pyramus (VIII), granular layer"
-957 255 252 145 1 1 1 "Uvula (IX)"
-10734 255 252 145 1 1 1 "Uvula (IX), molecular layer"
-10733 255 252 145 1 1 1 "Uvula (IX), Purkinje layer"
-10732 236 231 84 1 1 1 "Uvula (IX), granular layer"
-968 255 252 145 1 1 1 "Nodulus (X)"
-10737 255 252 145 1 1 1 "Nodulus (X), molecular layer"
-10736 255 252 145 1 1 1 "Nodulus (X), Purkinje layer"
-10735 236 231 84 1 1 1 "Nodulus (X), granular layer"
-1073 255 252 145 1 1 1 "Hemispheric regions"
-1007 255 252 145 1 1 1 "Simple lobule"
-10674 255 252 145 1 1 1 "Simple lobule, molecular layer"
-10673 255 252 145 1 1 1 "Simple lobule, Purkinje layer"
-10672 236 231 84 1 1 1 "Simple lobule, granular layer"
-1017 255 252 145 1 1 1 "Ansiform lobule"
-1056 255 252 145 1 1 1 "Crus 1"
-10677 255 252 145 1 1 1 "Crus 1, molecular layer"
-10676 255 252 145 1 1 1 "Crus 1, Purkinje layer"
-10675 236 231 84 1 1 1 "Crus 1, granular layer"
-1064 255 252 145 1 1 1 "Crus 2"
-10680 255 252 145 1 1 1 "Crus 2, molecular layer"
-10679 255 252 145 1 1 1 "Crus 2, Purkinje layer"
-10678 236 231 84 1 1 1 "Crus 2, granular layer"
-1025 255 252 145 1 1 1 "Paramedian lobule"
-10683 255 252 145 1 1 1 "Paramedian lobule, molecular layer"
-10682 255 252 145 1 1 1 "Paramedian lobule, Purkinje layer"
-10681 236 231 84 1 1 1 "Paramedian lobule, granular layer"
-1033 255 252 145 1 1 1 "Copula pyramidis"
-10686 255 252 145 1 1 1 "Copula pyramidis, molecular layer"
-10685 255 252 145 1 1 1 "Copula pyramidis, Purkinje layer"
-10684 236 231 84 1 1 1 "Copula pyramidis, granular layer"
-1041 255 252 145 1 1 1 "Paraflocculus"
-10689 255 252 145 1 1 1 "Paraflocculus, molecular layer"
-10688 255 252 145 1 1 1 "Paraflocculus, Purkinje layer"
-10687 236 231 84 1 1 1 "Paraflocculus, granular layer"
-1049 255 252 145 1 1 1 "Flocculus"
-10692 255 252 145 1 1 1 "Flocculus, molecular layer"
-10691 255 252 145 1 1 1 "Flocculus, Purkinje layer"
-10690 236 231 84 1 1 1 "Flocculus, granular layer"
-1144 255 252 145 1 1 1 "Cerebellar cortex, molecular layer"
-1145 255 252 145 1 1 1 "Cerebellar cortex, Purkinje layer"
-1143 236 231 84 1 1 1 "Cerebellar cortex, granular layer"
-519 240 240 128 1 1 1 "Cerebellar nuclei"
-989 255 253 188 1 1 1 "Fastigial nucleus"
-91 255 253 188 1 1 1 "Interposed nucleus"
-846 255 253 188 1 1 1 "Dentate nucleus"
-1009 204 204 204 1 1 1 "fiber tracts"
-967 204 204 204 1 1 1 "cranial nerves"
-885 204 204 204 1 1 1 "terminal nerve"
-949 204 204 204 1 1 1 "vomeronasal nerve"
-840 204 204 204 1 1 1 "olfactory nerve"
-1016 204 204 204 1 1 1 "olfactory nerve layer of main olfactory bulb"
-21 204 204 204 1 1 1 "lateral olfactory tract, general"
-665 204 204 204 1 1 1 "lateral olfactory tract, body"
-538 204 204 204 1 1 1 "dorsal limb"
-459 204 204 204 1 1 1 "accessory olfactory tract"
-900 204 204 204 1 1 1 "anterior commissure, olfactory limb"
-848 204 204 204 1 1 1 "optic nerve"
-876 204 204 204 1 1 1 "accessory optic tract"
-916 204 204 204 1 1 1 "brachium of the superior colliculus"
-336 204 204 204 1 1 1 "superior colliculus commissure"
-117 204 204 204 1 1 1 "optic chiasm"
-125 204 204 204 1 1 1 "optic tract"
-357 204 204 204 1 1 1 "tectothalamic pathway"
-832 204 204 204 1 1 1 "oculomotor nerve"
-62 204 204 204 1 1 1 "medial longitudinal fascicle"
-158 204 204 204 1 1 1 "posterior commissure"
-911 204 204 204 1 1 1 "trochlear nerve"
-384 204 204 204 1 1 1 "trochlear nerve decussation"
-710 204 204 204 1 1 1 "abducens nerve"
-901 204 204 204 1 1 1 "trigeminal nerve"
-93 204 204 204 1 1 1 "motor root of the trigeminal nerve"
-229 204 204 204 1 1 1 "sensory root of the trigeminal nerve"
-705 204 204 204 1 1 1 "midbrain tract of the trigeminal nerve"
-794 204 204 204 1 1 1 "spinal tract of the trigeminal nerve"
-798 204 204 204 1 1 1 "facial nerve"
-1131 204 204 204 1 1 1 "intermediate nerve"
-1116 204 204 204 1 1 1 "genu of the facial nerve"
-933 204 204 204 1 1 1 "vestibulocochlear nerve"
-1076 204 204 204 1 1 1 "efferent cochleovestibular bundle"
-413 204 204 204 1 1 1 "vestibular nerve"
-948 204 204 204 1 1 1 "cochlear nerve"
-841 204 204 204 1 1 1 "trapezoid body"
-641 204 204 204 1 1 1 "intermediate acoustic stria"
-506 204 204 204 1 1 1 "dorsal acoustic stria"
-658 204 204 204 1 1 1 "lateral lemniscus"
-633 204 204 204 1 1 1 "inferior colliculus commissure"
-482 204 204 204 1 1 1 "brachium of the inferior colliculus"
-808 204 204 204 1 1 1 "glossopharyngeal nerve"
-917 204 204 204 1 1 1 "vagus nerve"
-237 204 204 204 1 1 1 "solitary tract"
-717 204 204 204 1 1 1 "accessory spinal nerve"
-813 204 204 204 1 1 1 "hypoglossal nerve"
-925 204 204 204 1 1 1 "ventral roots"
-792 204 204 204 1 1 1 "dorsal roots"
-932 204 204 204 1 1 1 "cervicothalamic tract"
-570 204 204 204 1 1 1 "dorsolateral fascicle"
-522 204 204 204 1 1 1 "dorsal commissure of the spinal cord"
-858 204 204 204 1 1 1 "ventral commissure of the spinal cord"
-586 204 204 204 1 1 1 "fasciculus proprius"
-514 204 204 204 1 1 1 "dorsal column"
-380 204 204 204 1 1 1 "cuneate fascicle"
-388 204 204 204 1 1 1 "gracile fascicle"
-396 204 204 204 1 1 1 "internal arcuate fibers"
-697 204 204 204 1 1 1 "medial lemniscus"
-871 204 204 204 1 1 1 "spinothalamic tract"
-29 204 204 204 1 1 1 "lateral spinothalamic tract"
-389 204 204 204 1 1 1 "ventral spinothalamic tract"
-245 204 204 204 1 1 1 "spinocervical tract"
-261 204 204 204 1 1 1 "spino-olivary pathway"
-270 204 204 204 1 1 1 "spinoreticular pathway"
-293 204 204 204 1 1 1 "spinovestibular pathway"
-277 204 204 204 1 1 1 "spinotectal pathway"
-253 204 204 204 1 1 1 "spinohypothalamic pathway"
-285 204 204 204 1 1 1 "spinotelenchephalic pathway"
-627 204 204 204 1 1 1 "hypothalamohypophysial tract"
-960 204 204 204 1 1 1 "cerebellum related fiber tracts"
-744 204 204 204 1 1 1 "cerebellar commissure"
-752 204 204 204 1 1 1 "cerebellar peduncles"
-326 204 204 204 1 1 1 "superior cerebelar peduncles"
-812 204 204 204 1 1 1 "superior cerebellar peduncle decussation"
-85 204 204 204 1 1 1 "spinocerebellar tract"
-850 204 204 204 1 1 1 "uncinate fascicle"
-866 204 204 204 1 1 1 "ventral spinocerebellar tract"
-78 204 204 204 1 1 1 "middle cerebellar peduncle"
-1123 204 204 204 1 1 1 "inferior cerebellar peduncle"
-553 204 204 204 1 1 1 "dorsal spinocerebellar tract"
-499 204 204 204 1 1 1 "cuneocerebellar tract"
-650 204 204 204 1 1 1 "juxtarestiform body"
-490 204 204 204 1 1 1 "bulbocerebellar tract"
-404 204 204 204 1 1 1 "olivocerebellar tract"
-410 204 204 204 1 1 1 "reticulocerebellar tract"
-373 204 204 204 1 1 1 "trigeminocerebellar tract"
-728 204 204 204 1 1 1 "arbor vitae"
-484682512 204 204 204 1 1 1 "supra-callosal cerebral white matter"
-983 204 204 204 1 1 1 "lateral forebrain bundle system"
-776 204 204 204 1 1 1 "corpus callosum"
-956 204 204 204 1 1 1 "corpus callosum, anterior forceps"
-579 204 204 204 1 1 1 "external capsule"
-964 204 204 204 1 1 1 "corpus callosum, extreme capsule"
-1108 204 204 204 1 1 1 "genu of corpus callosum"
-971 204 204 204 1 1 1 "corpus callosum, posterior forceps"
-979 204 204 204 1 1 1 "corpus callosum, rostrum"
-484682516 204 204 204 1 1 1 "corpus callosum, body"
-986 204 204 204 1 1 1 "corpus callosum, splenium"
-784 204 204 204 1 1 1 "corticospinal tract"
-6 204 204 204 1 1 1 "internal capsule"
-924 204 204 204 1 1 1 "cerebal peduncle"
-1036 204 204 204 1 1 1 "corticotectal tract"
-1012 204 204 204 1 1 1 "corticorubral tract"
-1003 204 204 204 1 1 1 "corticopontine tract"
-994 204 204 204 1 1 1 "corticobulbar tract"
-190 204 204 204 1 1 1 "pyramid"
-198 204 204 204 1 1 1 "pyramidal decussation"
-1019 204 204 204 1 1 1 "corticospinal tract, crossed"
-1028 204 204 204 1 1 1 "corticospinal tract, uncrossed"
-896 204 204 204 1 1 1 "thalamus related"
-1092 204 204 204 1 1 1 "external medullary lamina of the thalamus"
-14 204 204 204 1 1 1 "internal medullary lamina of the thalamus"
-86 204 204 204 1 1 1 "middle thalamic commissure"
-365 204 204 204 1 1 1 "thalamic peduncles"
-484682520 204 204 204 1 1 1 "optic radiation"
-484682524 204 204 204 1 1 1 "auditory radiation"
-1000 204 204 204 1 1 1 "extrapyramidal fiber systems"
-760 204 204 204 1 1 1 "cerebral nuclei related"
-142 204 204 204 1 1 1 "pallidothalmic pathway"
-102 204 204 204 1 1 1 "nigrostriatal tract"
-109 204 204 204 1 1 1 "nigrothalamic fibers"
-134 204 204 204 1 1 1 "pallidotegmental fascicle"
-309 204 204 204 1 1 1 "striatonigral pathway"
-317 204 204 204 1 1 1 "subthalamic fascicle"
-877 204 204 204 1 1 1 "tectospinal pathway"
-1051 204 204 204 1 1 1 "direct tectospinal pathway"
-1060 204 204 204 1 1 1 "doral tegmental decussation"
-1043 204 204 204 1 1 1 "crossed tectospinal pathway"
-863 204 204 204 1 1 1 "rubrospinal tract"
-397 204 204 204 1 1 1 "ventral tegmental decussation"
-221 204 204 204 1 1 1 "rubroreticular tract"
-736 204 204 204 1 1 1 "central tegmental bundle"
-855 204 204 204 1 1 1 "retriculospinal tract"
-205 204 204 204 1 1 1 "retriculospinal tract, lateral part"
-213 204 204 204 1 1 1 "retriculospinal tract, medial part"
-941 204 204 204 1 1 1 "vestibulospinal pathway"
-991 204 204 204 1 1 1 "medial forebrain bundle system"
-768 204 204 204 1 1 1 "cerebrum related"
-884 204 204 204 1 1 1 "amygdalar capsule"
-892 204 204 204 1 1 1 "ansa peduncularis"
-908 204 204 204 1 1 1 "anterior commissure, temporal limb"
-940 204 204 204 1 1 1 "cingulum bundle"
-1099 204 204 204 1 1 1 "fornix system"
-466 204 204 204 1 1 1 "alveus"
-530 204 204 204 1 1 1 "dorsal fornix"
-603 204 204 204 1 1 1 "fimbria"
-745 204 204 204 1 1 1 "precommissural fornix, general"
-420 204 204 204 1 1 1 "precommissural fornix diagonal band"
-737 204 204 204 1 1 1 "postcommissural fornix"
-428 204 204 204 1 1 1 "medial corticohypothalmic tract"
-436 204 204 204 1 1 1 "columns of the fornix"
-618 204 204 204 1 1 1 "hippocampal commissures"
-443 204 204 204 1 1 1 "dorsal hippocampal commissure"
-449 204 204 204 1 1 1 "ventral hippocampal commissure"
-713 204 204 204 1 1 1 "perforant path"
-474 204 204 204 1 1 1 "angular path"
-37 204 204 204 1 1 1 "longitudinal association bundle"
-301 204 204 204 1 1 1 "stria terminalis"
-484682528 204 204 204 1 1 1 "commissural branch of stria terminalis"
-824 204 204 204 1 1 1 "hypothalamus related"
-54 204 204 204 1 1 1 "medial forebrain bundle"
-405 204 204 204 1 1 1 "ventrolateral hypothalamic tract"
-174 204 204 204 1 1 1 "preoptic commissure"
-349 204 204 204 1 1 1 "supraoptic commissures"
-817 204 204 204 1 1 1 "supraoptic commissures, anterior"
-825 204 204 204 1 1 1 "supraoptic commissures, dorsal"
-833 204 204 204 1 1 1 "supraoptic commissures, ventral"
-166 204 204 204 1 1 1 "premammillary commissure"
-341 204 204 204 1 1 1 "supramammillary decussation"
-182 204 204 204 1 1 1 "propriohypothalamic pathways"
-762 204 204 204 1 1 1 "propriohypothalamic pathways, dorsal"
-770 204 204 204 1 1 1 "propriohypothalamic pathways, lateral"
-779 204 204 204 1 1 1 "propriohypothalamic pathways, medial"
-787 204 204 204 1 1 1 "propriohypothalamic pathways, ventral"
-150 204 204 204 1 1 1 "periventricular bundle of the hypothalamus"
-46 204 204 204 1 1 1 "mammillary related"
-753 204 204 204 1 1 1 "principal mammillary tract"
-690 204 204 204 1 1 1 "mammilothalmic tract"
-681 204 204 204 1 1 1 "mammillotegmental tract"
-673 204 204 204 1 1 1 "mammillary peduncle"
-1068 204 204 204 1 1 1 "dorsal thalamus related"
-722 204 204 204 1 1 1 "periventricular bundle of the thalamus"
-1083 204 204 204 1 1 1 "epithalamus related"
-802 204 204 204 1 1 1 "stria medullaris"
-595 204 204 204 1 1 1 "fasciculus retroflexus"
-611 204 204 204 1 1 1 "habenular commissure"
-730 204 204 204 1 1 1 "pineal stalk"
-70 204 204 204 1 1 1 "midbrain related"
-547 204 204 204 1 1 1 "dorsal longitudinal fascicle"
-563 204 204 204 1 1 1 "dorsal tegmental tract"
-73 170 170 170 1 1 1 "ventricular systems"
-81 170 170 170 1 1 1 "lateral ventricle"
-89 170 170 170 1 1 1 "rhinocele"
-98 170 170 170 1 1 1 "subependymal zone"
-108 170 170 170 1 1 1 "choroid plexus"
-116 170 170 170 1 1 1 "choroid fissure"
-124 170 170 170 1 1 1 "interventricular foramen"
-129 170 170 170 1 1 1 "third ventricle"
-140 170 170 170 1 1 1 "cerebral aqueduct"
-145 170 170 170 1 1 1 "fourth ventricle"
-153 170 170 170 1 1 1 "lateral recess"
-164 170 170 170 1 1 1 "central canal, spinal cord/medulla"
-1024 170 170 170 1 1 1 "grooves"
-1032 170 170 170 1 1 1 "grooves of the cerebral cortex"
-1055 170 170 170 1 1 1 "endorhinal groove"
-1063 170 170 170 1 1 1 "hippocampal fissure"
-1071 170 170 170 1 1 1 "rhinal fissure"
-1078 170 170 170 1 1 1 "rhinal incisure"
-1040 170 170 170 1 1 1 "grooves of the cerebellar cortex"
-1087 170 170 170 1 1 1 "precentral fissure"
-1095 170 170 170 1 1 1 "preculminate fissure"
-1103 170 170 170 1 1 1 "primary fissure"
-1112 170 170 170 1 1 1 "posterior superior fissure"
-1119 170 170 170 1 1 1 "prepyramidal fissure"
-3 170 170 170 1 1 1 "secondary fissure"
-11 170 170 170 1 1 1 "posterolateral fissure"
-18 170 170 170 1 1 1 "nodular fissure"
-25 170 170 170 1 1 1 "simple fissure"
-34 170 170 170 1 1 1 "intercrural fissure"
-43 170 170 170 1 1 1 "ansoparamedian fissure"
-49 170 170 170 1 1 1 "intraparafloccular fissure"
-57 170 170 170 1 1 1 "paramedian sulcus"
-65 170 170 170 1 1 1 "parafloccular sulcus"
-624 170 170 170 1 1 1 "Interpeduncular fossa"
-304325711 127 46 126 1 1 1 "retina"
diff --git a/annotation_volumes/AllenMouseBrain_Atlas_CCF_2017.label b/annotation_volumes/AllenMouseBrain_Atlas_CCF_2017.label
deleted file mode 100644
index 31c781b65efa839a9cf955b3475921f5937e01af..0000000000000000000000000000000000000000
--- a/annotation_volumes/AllenMouseBrain_Atlas_CCF_2017.label
+++ /dev/null
@@ -1,1342 +0,0 @@
-################################################
-# ITK-SnAP Label Description File
-# File format:
-# IDX -R- -G- -B- -A-- VIS MSH LABEL
-# Fields:
-# IDX: Zero-based index
-# -R-: Red color component (0..255)
-# -G-: Green color component (0..255)
-# -B-: Blue color component (0..255)
-# -A-: Label transparency (0.00 .. 1.00)
-# VIS: Label visibility (0 or 1)
-# IDX: Label mesh visibility (0 or 1)
-# LABEL: Label description
-################################################
- 0 0 0 0 0 0 0 "Clear Label"
-997 255 255 255 1 1 1 "root"
-8 191 218 227 1 1 1 "Basic cell groups and regions"
-567 176 240 255 1 1 1 "Cerebrum"
-688 176 255 184 1 1 1 "Cerebral cortex"
-695 112 255 112 1 1 1 "Cortical plate"
-315 112 255 113 1 1 1 "Isocortex"
-184 38 143 69 1 1 1 "Frontal pole, cerebral cortex"
-68 38 143 69 1 1 1 "Frontal pole, layer 1"
-667 38 143 69 1 1 1 "Frontal pole, layer 2/3"
-526157192 38 143 69 1 1 1 "Frontal pole, layer 5"
-526157196 38 143 69 1 1 1 "Frontal pole, layer 6a"
-526322264 38 143 69 1 1 1 "Frontal pole, layer 6b"
-500 31 157 90 1 1 1 "Somatomotor areas"
-107 31 157 90 1 1 1 "Somatomotor areas, Layer 1"
-219 31 157 90 1 1 1 "Somatomotor areas, Layer 2/3"
-299 31 157 90 1 1 1 "Somatomotor areas, Layer 5"
-644 31 157 90 1 1 1 "Somatomotor areas, Layer 6a"
-947 31 157 90 1 1 1 "Somatomotor areas, Layer 6b"
-985 31 157 90 1 1 1 "Primary motor area"
-320 31 157 90 1 1 1 "Primary motor area, Layer 1"
-943 31 157 90 1 1 1 "Primary motor area, Layer 2/3"
-648 31 157 90 1 1 1 "Primary motor area, Layer 5"
-844 31 157 90 1 1 1 "Primary motor area, Layer 6a"
-882 31 157 90 1 1 1 "Primary motor area, Layer 6b"
-993 31 157 90 1 1 1 "Secondary motor area"
-656 31 157 90 1 1 1 "Secondary motor area, layer 1"
-962 31 157 90 1 1 1 "Secondary motor area, layer 2/3"
-767 31 157 90 1 1 1 "Secondary motor area, layer 5"
-1021 31 157 90 1 1 1 "Secondary motor area, layer 6a"
-1085 31 157 90 1 1 1 "Secondary motor area, layer 6b"
-453 24 128 100 1 1 1 "Somatosensory areas"
-12993 24 128 100 1 1 1 "Somatosensory areas, layer 1"
-12994 24 128 100 1 1 1 "Somatosensory areas, layer 2/3"
-12995 24 128 100 1 1 1 "Somatosensory areas, layer 4"
-12996 24 128 100 1 1 1 "Somatosensory areas, layer 5"
-12997 24 128 100 1 1 1 "Somatosensory areas, layer 6a"
-12998 24 128 100 1 1 1 "Somatosensory areas, layer 6b"
-322 24 128 100 1 1 1 "Primary somatosensory area"
-793 24 128 100 1 1 1 "Primary somatosensory area, layer 1"
-346 24 128 100 1 1 1 "Primary somatosensory area, layer 2/3"
-865 24 128 100 1 1 1 "Primary somatosensory area, layer 4"
-921 24 128 100 1 1 1 "Primary somatosensory area, layer 5"
-686 24 128 100 1 1 1 "Primary somatosensory area, layer 6a"
-719 24 128 100 1 1 1 "Primary somatosensory area, layer 6b"
-353 24 128 100 1 1 1 "Primary somatosensory area, nose"
-558 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 1"
-838 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 2/3"
-654 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 4"
-702 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 5"
-889 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 6a"
-929 24 128 100 1 1 1 "Primary somatosensory area, nose, layer 6b"
-329 24 128 100 1 1 1 "Primary somatosensory area, barrel field"
-981 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 1"
-201 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 2/3"
-1047 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 4"
-1070 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 5"
-1038 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 6a"
-1062 24 128 100 1 1 1 "Primary somatosensory area, barrel field, layer 6b"
-480149202 24 128 100 1 1 1 "Rostrolateral lateral visual area"
-480149206 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 1"
-480149210 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 2/3"
-480149214 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 4"
-480149218 24 128 100 1 1 1 "Rostrolateral lateral visual area,layer 5"
-480149222 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 6a"
-480149226 24 128 100 1 1 1 "Rostrolateral lateral visual area, layer 6b"
-337 24 128 100 1 1 1 "Primary somatosensory area, lower limb"
-1030 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 1"
-113 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 2/3"
-1094 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 4"
-1128 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 5"
-478 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 6a"
-510 24 128 100 1 1 1 "Primary somatosensory area, lower limb, layer 6b"
-345 24 128 100 1 1 1 "Primary somatosensory area, mouth"
-878 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 1"
-657 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 2/3"
-950 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 4"
-974 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 5"
-1102 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 6a"
-2 24 128 100 1 1 1 "Primary somatosensory area, mouth, layer 6b"
-369 24 128 100 1 1 1 "Primary somatosensory area, upper limb"
-450 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 1"
-854 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 2/3"
-577 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 4"
-625 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 5"
-945 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 6a"
-1026 24 128 100 1 1 1 "Primary somatosensory area, upper limb, layer 6b"
-361 24 128 100 1 1 1 "Primary somatosensory area, trunk"
-1006 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 1"
-670 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 2/3"
-1086 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 4"
-1111 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 5"
-9 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 6a"
-461 24 128 100 1 1 1 "Primary somatosensory area, trunk, layer 6b"
-182305689 24 128 100 1 1 1 "Primary somatosensory area, unassigned"
-182305693 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 1"
-182305697 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 2/3"
-182305701 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 4"
-182305705 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 5"
-182305709 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 6a"
-182305713 24 128 100 1 1 1 "Primary somatosensory area, unassigned, layer 6b"
-378 24 128 100 1 1 1 "Supplemental somatosensory area"
-873 24 128 100 1 1 1 "Supplemental somatosensory area, layer 1"
-806 24 128 100 1 1 1 "Supplemental somatosensory area, layer 2/3"
-1035 24 128 100 1 1 1 "Supplemental somatosensory area, layer 4"
-1090 24 128 100 1 1 1 "Supplemental somatosensory area, layer 5"
-862 24 128 100 1 1 1 "Supplemental somatosensory area, layer 6a"
-893 24 128 100 1 1 1 "Supplemental somatosensory area, layer 6b"
-1057 0 156 117 1 1 1 "Gustatory areas"
-36 0 156 117 1 1 1 "Gustatory areas, layer 1"
-180 0 156 117 1 1 1 "Gustatory areas, layer 2/3"
-148 0 156 117 1 1 1 "Gustatory areas, layer 4"
-187 0 156 117 1 1 1 "Gustatory areas, layer 5"
-638 0 156 117 1 1 1 "Gustatory areas, layer 6a"
-662 0 156 117 1 1 1 "Gustatory areas, layer 6b"
-677 17 173 131 1 1 1 "Visceral area"
-897 17 173 131 1 1 1 "Visceral area, layer 1"
-1106 17 173 131 1 1 1 "Visceral area, layer 2/3"
-1010 17 173 131 1 1 1 "Visceral area, layer 4"
-1058 17 173 131 1 1 1 "Visceral area, layer 5"
-857 17 173 131 1 1 1 "Visceral area, layer 6a"
-849 17 173 131 1 1 1 "Visceral area, layer 6b"
-247 1 147 153 1 1 1 "Auditory areas"
-1011 1 147 153 1 1 1 "Dorsal auditory area"
-527 1 147 153 1 1 1 "Dorsal auditory area, layer 1"
-600 1 147 153 1 1 1 "Dorsal auditory area, layer 2/3"
-678 1 147 153 1 1 1 "Dorsal auditory area, layer 4"
-252 1 147 153 1 1 1 "Dorsal auditory area, layer 5"
-156 1 147 153 1 1 1 "Dorsal auditory area, layer 6a"
-243 1 147 153 1 1 1 "Dorsal auditory area, layer 6b"
-480149230 1 147 153 1 1 1 "Laterolateral anterior visual area"
-480149234 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 1"
-480149238 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 2/3"
-480149242 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 4"
-480149246 1 147 153 1 1 1 "Laterolateral anterior visual area,layer 5"
-480149250 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 6a"
-480149254 1 147 153 1 1 1 "Laterolateral anterior visual area, layer 6b"
-1002 1 147 153 1 1 1 "Primary auditory area"
-735 1 147 153 1 1 1 "Primary auditory area, layer 1"
-251 1 147 153 1 1 1 "Primary auditory area, layer 2/3"
-816 1 147 153 1 1 1 "Primary auditory area, layer 4"
-847 1 147 153 1 1 1 "Primary auditory area, layer 5"
-954 1 147 153 1 1 1 "Primary auditory area, layer 6a"
-1005 1 147 153 1 1 1 "Primary auditory area, layer 6b"
-1027 1 147 153 1 1 1 "Posterior auditory area"
-696 1 147 153 1 1 1 "Posterior auditory area, layer 1"
-643 1 147 153 1 1 1 "Posterior auditory area, layer 2/3"
-759 1 147 153 1 1 1 "Posterior auditory area, layer 4"
-791 1 147 153 1 1 1 "Posterior auditory area, layer 5"
-249 1 147 153 1 1 1 "Posterior auditory area, layer 6a"
-456 1 147 153 1 1 1 "Posterior auditory area, layer 6b"
-1018 1 147 153 1 1 1 "Ventral auditory area"
-959 1 147 153 1 1 1 "Ventral auditory area, layer 1"
-755 1 147 153 1 1 1 "Ventral auditory area, layer 2/3"
-990 1 147 153 1 1 1 "Ventral auditory area, layer 4"
-1023 1 147 153 1 1 1 "Ventral auditory area, layer 5"
-520 1 147 153 1 1 1 "Ventral auditory area, layer 6a"
-598 1 147 153 1 1 1 "Ventral auditory area, layer 6b"
-669 8 133 140 1 1 1 "Visual areas"
-801 8 133 140 1 1 1 "Visual areas, layer 1"
-561 8 133 140 1 1 1 "Visual areas, layer 2/3"
-913 8 133 140 1 1 1 "Visual areas, layer 4"
-937 8 133 140 1 1 1 "Visual areas, layer 5"
-457 8 133 140 1 1 1 "Visual areas, layer 6a"
-497 8 133 140 1 1 1 "Visual areas, layer 6b"
-402 8 133 140 1 1 1 "Anterolateral visual area"
-1074 8 133 140 1 1 1 "Anterolateral visual area, layer 1"
-905 8 133 140 1 1 1 "Anterolateral visual area, layer 2/3"
-1114 8 133 140 1 1 1 "Anterolateral visual area, layer 4"
-233 8 133 140 1 1 1 "Anterolateral visual area, layer 5"
-601 8 133 140 1 1 1 "Anterolateral visual area, layer 6a"
-649 8 133 140 1 1 1 "Anterolateral visual area, layer 6b"
-394 8 133 140 1 1 1 "Anteromedial visual area"
-281 8 133 140 1 1 1 "Anteromedial visual area, layer 1"
-1066 8 133 140 1 1 1 "Anteromedial visual area, layer 2/3"
-401 8 133 140 1 1 1 "Anteromedial visual area, layer 4"
-433 8 133 140 1 1 1 "Anteromedial visual area, layer 5"
-1046 8 133 140 1 1 1 "Anteromedial visual area, layer 6a"
-441 8 133 140 1 1 1 "Anteromedial visual area, layer 6b"
-409 8 133 140 1 1 1 "Lateral visual area"
-421 8 133 140 1 1 1 "Lateral visual area, layer 1"
-973 8 133 140 1 1 1 "Lateral visual area, layer 2/3"
-573 8 133 140 1 1 1 "Lateral visual area, layer 4"
-613 8 133 140 1 1 1 "Lateral visual area, layer 5"
-74 8 133 140 1 1 1 "Lateral visual area, layer 6a"
-121 8 133 140 1 1 1 "Lateral visual area, layer 6b"
-385 8 133 140 1 1 1 "Primary visual area"
-593 8 133 140 1 1 1 "Primary visual area, layer 1"
-821 8 133 140 1 1 1 "Primary visual area, layer 2/3"
-721 8 133 140 1 1 1 "Primary visual area, layer 4"
-778 8 133 140 1 1 1 "Primary visual area, layer 5"
-33 8 133 140 1 1 1 "Primary visual area, layer 6a"
-305 8 133 140 1 1 1 "Primary visual area, layer 6b"
-425 8 133 140 1 1 1 "Posterolateral visual area"
-750 8 133 140 1 1 1 "Posterolateral visual area, layer 1"
-269 8 133 140 1 1 1 "Posterolateral visual area, layer 2/3"
-869 8 133 140 1 1 1 "Posterolateral visual area, layer 4"
-902 8 133 140 1 1 1 "Posterolateral visual area, layer 5"
-377 8 133 140 1 1 1 "Posterolateral visual area, layer 6a"
-393 8 133 140 1 1 1 "Posterolateral visual area, layer 6b"
-533 8 133 140 1 1 1 "posteromedial visual area"
-805 8 133 140 1 1 1 "posteromedial visual area, layer 1"
-41 8 133 140 1 1 1 "posteromedial visual area, layer 2/3"
-501 8 133 140 1 1 1 "posteromedial visual area, layer 4"
-565 8 133 140 1 1 1 "posteromedial visual area, layer 5"
-257 8 133 140 1 1 1 "posteromedial visual area, layer 6a"
-469 8 133 140 1 1 1 "posteromedial visual area, layer 6b"
-312782574 8 133 140 1 1 1 "Laterointermediate area"
-312782578 8 133 140 1 1 1 "Laterointermediate area, layer 1"
-312782582 8 133 140 1 1 1 "Laterointermediate area, layer 2/3"
-312782586 8 133 140 1 1 1 "Laterointermediate area, layer 4"
-312782590 8 133 140 1 1 1 "Laterointermediate area, layer 5"
-312782594 8 133 140 1 1 1 "Laterointermediate area, layer 6a"
-312782598 8 133 140 1 1 1 "Laterointermediate area, layer 6b"
-312782628 8 133 140 1 1 1 "Postrhinal area"
-312782632 8 133 140 1 1 1 "Postrhinal area, layer 1"
-312782636 8 133 140 1 1 1 "Postrhinal area, layer 2/3"
-312782640 8 133 140 1 1 1 "Postrhinal area, layer 4"
-312782644 8 133 140 1 1 1 "Postrhinal area, layer 5"
-312782648 8 133 140 1 1 1 "Postrhinal area, layer 6a"
-312782652 8 133 140 1 1 1 "Postrhinal area, layer 6b"
-31 64 166 102 1 1 1 "Anterior cingulate area"
-572 64 166 102 1 1 1 "Anterior cingulate area, layer 1"
-1053 64 166 102 1 1 1 "Anterior cingulate area, layer 2/3"
-739 64 166 102 1 1 1 "Anterior cingulate area, layer 5"
-179 64 166 102 1 1 1 "Anterior cingulate area, layer 6a"
-227 64 166 102 1 1 1 "Anterior cingulate area, layer 6b"
-39 64 166 102 1 1 1 "Anterior cingulate area, dorsal part"
-935 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 1"
-211 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 2/3"
-1015 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 5"
-919 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 6a"
-927 64 166 102 1 1 1 "Anterior cingulate area, dorsal part, layer 6b"
-48 64 166 102 1 1 1 "Anterior cingulate area, ventral part"
-588 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 1"
-296 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 2/3"
-772 64 166 102 1 1 1 "Anterior cingulate area, ventral part, layer 5"
-810 64 166 102 1 1 1 "Anterior cingulate area, ventral part, 6a"
-819 64 166 102 1 1 1 "Anterior cingulate area, ventral part, 6b"
-972 47 168 80 1 1 1 "Prelimbic area"
-171 47 168 80 1 1 1 "Prelimbic area, layer 1"
-195 47 168 80 1 1 1 "Prelimbic area, layer 2"
-304 47 168 80 1 1 1 "Prelimbic area, layer 2/3"
-363 47 168 80 1 1 1 "Prelimbic area, layer 5"
-84 47 168 80 1 1 1 "Prelimbic area, layer 6a"
-132 47 168 80 1 1 1 "Prelimbic area, layer 6b"
-44 89 179 99 1 1 1 "Infralimbic area"
-707 89 179 99 1 1 1 "Infralimbic area, layer 1"
-747 89 179 99 1 1 1 "Infralimbic area, layer 2"
-556 89 179 99 1 1 1 "Infralimbic area, layer 2/3"
-827 89 179 99 1 1 1 "Infralimbic area, layer 5"
-1054 89 179 99 1 1 1 "Infralimbic area, layer 6a"
-1081 89 179 99 1 1 1 "Infralimbic area, layer 6b"
-714 36 138 94 1 1 1 "Orbital area"
-264 36 138 94 1 1 1 "Orbital area, layer 1"
-492 36 138 94 1 1 1 "Orbital area, layer 2/3"
-352 36 138 94 1 1 1 "Orbital area, layer 5"
-476 36 138 94 1 1 1 "Orbital area, layer 6a"
-516 36 138 94 1 1 1 "Orbital area, layer 6b"
-723 36 138 94 1 1 1 "Orbital area, lateral part"
-448 36 138 94 1 1 1 "Orbital area, lateral part, layer 1"
-412 36 138 94 1 1 1 "Orbital area, lateral part, layer 2/3"
-630 36 138 94 1 1 1 "Orbital area, lateral part, layer 5"
-440 36 138 94 1 1 1 "Orbital area, lateral part, layer 6a"
-488 36 138 94 1 1 1 "Orbital area, lateral part, layer 6b"
-731 36 138 94 1 1 1 "Orbital area, medial part"
-484 36 138 94 1 1 1 "Orbital area, medial part, layer 1"
-524 36 138 94 1 1 1 "Orbital area, medial part, layer 2"
-582 36 138 94 1 1 1 "Orbital area, medial part, layer 2/3"
-620 36 138 94 1 1 1 "Orbital area, medial part, layer 5"
-910 36 138 94 1 1 1 "Orbital area, medial part, layer 6a"
-527696977 36 138 94 1 1 1 "Orbital area, medial part, layer 6b"
-738 36 138 94 1 1 1 "Orbital area, ventral part"
-746 36 138 94 1 1 1 "Orbital area, ventrolateral part"
-969 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 1"
-288 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 2/3"
-1125 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 5"
-608 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 6a"
-680 36 138 94 1 1 1 "Orbital area, ventrolateral part, layer 6b"
-95 33 152 102 1 1 1 "Agranular insular area"
-104 33 152 102 1 1 1 "Agranular insular area, dorsal part"
-996 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 1"
-328 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 2/3"
-1101 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 5"
-783 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 6a"
-831 33 152 102 1 1 1 "Agranular insular area, dorsal part, layer 6b"
-111 33 152 102 1 1 1 "Agranular insular area, posterior part"
-120 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 1"
-163 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 2/3"
-344 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 5"
-314 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 6a"
-355 33 152 102 1 1 1 "Agranular insular area, posterior part, layer 6b"
-119 33 152 102 1 1 1 "Agranular insular area, ventral part"
-704 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 1"
-694 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 2/3"
-800 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 5"
-675 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 6a"
-699 33 152 102 1 1 1 "Agranular insular area, ventral part, layer 6b"
-254 26 166 152 1 1 1 "Retrosplenial area"
-894 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part"
-671 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 1"
-965 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 2/3"
-774 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 5"
-906 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 6a"
-279 26 166 152 1 1 1 "Retrosplenial area, lateral agranular part, layer 6b"
-480149258 26 166 152 1 1 1 "Mediomedial anterior visual area"
-480149262 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 1"
-480149266 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 2/3"
-480149270 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 4"
-480149274 26 166 152 1 1 1 "Mediomedial anterior visual area,layer 5"
-480149278 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 6a"
-480149282 26 166 152 1 1 1 "Mediomedial anterior visual area, layer 6b"
-480149286 26 166 152 1 1 1 "Mediomedial posterior visual area"
-480149290 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 1"
-480149294 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 2/3"
-480149298 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 4"
-480149302 26 166 152 1 1 1 "Mediomedial posterior visual area,layer 5"
-480149306 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 6a"
-480149310 26 166 152 1 1 1 "Mediomedial posterior visual area, layer 6b"
-480149314 26 166 152 1 1 1 "Medial visual area"
-480149318 26 166 152 1 1 1 "Medial visual area, layer 1"
-480149322 26 166 152 1 1 1 "Medial visual area, layer 2/3"
-480149326 26 166 152 1 1 1 "Medial visual area, layer 4"
-480149330 26 166 152 1 1 1 "Medial visual area,layer 5"
-480149334 26 166 152 1 1 1 "Medial visual area, layer 6a"
-480149338 26 166 152 1 1 1 "Medial visual area, layer 6b"
-879 26 166 152 1 1 1 "Retrosplenial area, dorsal part"
-442 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 1"
-434 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 2/3"
-545 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 4"
-610 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 5"
-274 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 6a"
-330 26 166 152 1 1 1 "Retrosplenial area, dorsal part, layer 6b"
-886 26 166 152 1 1 1 "Retrosplenial area, ventral part"
-542 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 1"
-606 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 2"
-430 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 2/3"
-687 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 5"
-590 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 6a"
-622 26 166 152 1 1 1 "Retrosplenial area, ventral part, layer 6b"
-22 0 159 172 1 1 1 "Posterior parietal association areas"
-532 0 159 172 1 1 1 "Posterior parietal association areas, layer 1"
-241 0 159 172 1 1 1 "Posterior parietal association areas, layer 2/3"
-635 0 159 172 1 1 1 "Posterior parietal association areas, layer 4"
-683 0 159 172 1 1 1 "Posterior parietal association areas, layer 5"
-308 0 159 172 1 1 1 "Posterior parietal association areas, layer 6a"
-340 0 159 172 1 1 1 "Posterior parietal association areas, layer 6b"
-312782546 0 159 172 1 1 1 "Anterior area"
-312782550 0 159 172 1 1 1 "Anterior area, layer 1"
-312782554 0 159 172 1 1 1 "Anterior area, layer 2/3"
-312782558 0 159 172 1 1 1 "Anterior area, layer 4"
-312782562 0 159 172 1 1 1 "Anterior area, layer 5"
-312782566 0 159 172 1 1 1 "Anterior area, layer 6a"
-312782570 0 159 172 1 1 1 "Anterior area, layer 6b"
-417 0 159 172 1 1 1 "Rostrolateral visual area"
-312782604 0 159 172 1 1 1 "Rostrolateral area, layer 1"
-312782608 0 159 172 1 1 1 "Rostrolateral area, layer 2/3"
-312782612 0 159 172 1 1 1 "Rostrolateral area, layer 4"
-312782616 0 159 172 1 1 1 "Rostrolateral area, layer 5"
-312782620 0 159 172 1 1 1 "Rostrolateral area, layer 6a"
-312782624 0 159 172 1 1 1 "Rostrolateral area, layer 6b"
-541 21 176 179 1 1 1 "Temporal association areas"
-97 21 176 179 1 1 1 "Temporal association areas, layer 1"
-1127 21 176 179 1 1 1 "Temporal association areas, layer 2/3"
-234 21 176 179 1 1 1 "Temporal association areas, layer 4"
-289 21 176 179 1 1 1 "Temporal association areas, layer 5"
-729 21 176 179 1 1 1 "Temporal association areas, layer 6a"
-786 21 176 179 1 1 1 "Temporal association areas, layer 6b"
-922 14 150 132 1 1 1 "Perirhinal area"
-540 14 150 132 1 1 1 "Perirhinal area, layer 1"
-888 14 150 132 1 1 1 "Perirhinal area, layer 2/3"
-692 14 150 132 1 1 1 "Perirhinal area, layer 5"
-335 14 150 132 1 1 1 "Perirhinal area, layer 6a"
-368 14 150 132 1 1 1 "Perirhinal area, layer 6b"
-895 13 159 145 1 1 1 "Ectorhinal area"
-836 13 159 145 1 1 1 "Ectorhinal area/Layer 1"
-427 13 159 145 1 1 1 "Ectorhinal area/Layer 2/3"
-988 13 159 145 1 1 1 "Ectorhinal area/Layer 5"
-977 13 159 145 1 1 1 "Ectorhinal area/Layer 6a"
-1045 13 159 145 1 1 1 "Ectorhinal area/Layer 6b"
-698 154 210 189 1 1 1 "Olfactory areas"
-507 154 210 189 1 1 1 "Main olfactory bulb"
-212 130 199 174 1 1 1 "Main olfactory bulb, glomerular layer"
-220 130 199 174 1 1 1 "Main olfactory bulb, granule layer"
-228 154 210 189 1 1 1 "Main olfactory bulb, inner plexiform layer"
-236 130 199 174 1 1 1 "Main olfactory bulb, mitral layer"
-244 154 210 189 1 1 1 "Main olfactory bulb, outer plexiform layer"
-151 157 240 210 1 1 1 "Accessory olfactory bulb"
-188 157 240 210 1 1 1 "Accessory olfactory bulb, glomerular layer"
-196 149 228 200 1 1 1 "Accessory olfactory bulb, granular layer"
-204 157 240 210 1 1 1 "Accessory olfactory bulb, mitral layer"
-159 84 191 148 1 1 1 "Anterior olfactory nucleus"
-167 84 191 148 1 1 1 "Anterior olfactory nucleus, dorsal part"
-175 84 191 148 1 1 1 "Anterior olfactory nucleus, external part"
-183 84 191 148 1 1 1 "Anterior olfactory nucleus, lateral part"
-191 84 191 148 1 1 1 "Anterior olfactory nucleus, medial part"
-199 84 191 148 1 1 1 "Anterior olfactory nucleus, posteroventral part"
-160 84 191 148 1 1 1 "Anterior olfactory nucleus, layer 1"
-168 84 191 148 1 1 1 "Anterior olfactory nucleus, layer 2"
-589 98 208 159 1 1 1 "Taenia tecta"
-597 98 208 159 1 1 1 "Taenia tecta, dorsal part"
-297 98 208 159 1 1 1 "Taenia tecta, dorsal part, layers 1-4"
-1034 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 1"
-1042 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 2"
-1050 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 3"
-1059 98 208 159 1 1 1 "Taenia tecta, dorsal part, layer 4"
-605 98 208 159 1 1 1 "Taenia tecta, ventral part"
-306 98 208 159 1 1 1 "Taenia tecta, ventral part, layers 1-3"
-1067 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 1"
-1075 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 2"
-1082 98 208 159 1 1 1 "Taenia tecta, ventral part, layer 3"
-814 164 218 164 1 1 1 "Dorsal peduncular area"
-496 164 218 164 1 1 1 "Dorsal peduncular area, layer 1"
-535 164 218 164 1 1 1 "Dorsal peduncular area, layer 2"
-360 164 218 164 1 1 1 "Dorsal peduncular area, layer 2/3"
-646 164 218 164 1 1 1 "Dorsal peduncular area, layer 5"
-267 164 218 164 1 1 1 "Dorsal peduncular area, layer 6a"
-961 106 203 186 1 1 1 "Piriform area"
-152 106 203 186 1 1 1 "Piriform area, layers 1-3"
-276 106 203 186 1 1 1 "Piriform area, molecular layer"
-284 106 203 186 1 1 1 "Piriform area, pyramidal layer"
-291 106 203 186 1 1 1 "Piriform area, polymorph layer"
-619 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract"
-392 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, layers 1-3"
-260 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, molecular layer"
-268 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, pyramidal layer"
-1139 149 228 200 1 1 1 "Nucleus of the lateral olfactory tract, layer 3"
-631 97 231 183 1 1 1 "Cortical amygdalar area"
-639 97 231 183 1 1 1 "Cortical amygdalar area, anterior part"
-192 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 1"
-200 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 2"
-208 97 231 183 1 1 1 "Cortical amygdalar area, anterior part, layer 3"
-647 97 231 183 1 1 1 "Cortical amygdalar area, posterior part"
-655 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone"
-584 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layers 1-2"
-376 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layers 1-3"
-216 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 1"
-224 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 2"
-232 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, lateral zone, layer 3"
-663 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone"
-592 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layers 1-2"
-383 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layers 1-3"
-240 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 1"
-248 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 2"
-256 97 231 183 1 1 1 "Cortical amygdalar area, posterior part, medial zone, layer 3"
-788 89 218 171 1 1 1 "Piriform-amygdalar area"
-400 89 218 171 1 1 1 "Piriform-amygdalar area, layers 1-3"
-408 89 218 171 1 1 1 "Piriform-amygdalar area, molecular layer"
-416 89 218 171 1 1 1 "Piriform-amygdalar area, pyramidal layer"
-424 89 218 171 1 1 1 "Piriform-amygdalar area, polymorph layer"
-566 168 236 211 1 1 1 "Postpiriform transition area"
-517 168 236 211 1 1 1 "Postpiriform transition area, layers 1-3"
-1140 168 236 211 1 1 1 "Postpiriform transition area, layers 1"
-1141 168 236 211 1 1 1 "Postpiriform transition area, layers 2"
-1142 168 236 211 1 1 1 "Postpiriform transition area, layers 3"
-1089 126 208 75 1 1 1 "Hippocampal formation"
-1080 126 208 75 1 1 1 "Hippocampal region"
-375 126 208 75 1 1 1 "Ammon's horn"
-382 126 208 75 1 1 1 "Field CA1"
-391 126 208 75 1 1 1 "Field CA1, stratum lacunosum-moleculare"
-399 126 208 75 1 1 1 "Field CA1, stratum oriens"
-407 102 168 61 1 1 1 "Field CA1, pyramidal layer"
-415 126 208 75 1 1 1 "Field CA1, stratum radiatum"
-423 126 208 75 1 1 1 "Field CA2"
-431 126 208 75 1 1 1 "Field CA2, stratum lacunosum-moleculare"
-438 126 208 75 1 1 1 "Field CA2, stratum oriens"
-446 102 168 61 1 1 1 "Field CA2, pyramidal layer"
-454 126 208 75 1 1 1 "Field CA2, stratum radiatum"
-463 126 208 75 1 1 1 "Field CA3"
-471 126 208 75 1 1 1 "Field CA3, stratum lacunosum-moleculare"
-479 126 208 75 1 1 1 "Field CA3, stratum lucidum"
-486 126 208 75 1 1 1 "Field CA3, stratum oriens"
-495 102 168 61 1 1 1 "Field CA3, pyramidal layer"
-504 126 208 75 1 1 1 "Field CA3, stratum radiatum"
-726 126 208 75 1 1 1 "Dentate gyrus"
-10703 126 208 75 1 1 1 "Dentate gyrus, molecular layer"
-10704 126 208 75 1 1 1 "Dentate gyrus, polymorph layer"
-632 102 168 61 1 1 1 "Dentate gyrus, granule cell layer"
-10702 126 208 75 1 1 1 "Dentate gyrus, subgranular zone"
-734 126 208 75 1 1 1 "Dentate gyrus crest"
-742 126 208 75 1 1 1 "Dentate gyrus crest, molecular layer"
-751 126 208 75 1 1 1 "Dentate gyrus crest, polymorph layer"
-758 126 208 75 1 1 1 "Dentate gyrus crest, granule cell layer"
-766 126 208 75 1 1 1 "Dentate gyrus lateral blade"
-775 126 208 75 1 1 1 "Dentate gyrus lateral blade, molecular layer"
-782 126 208 75 1 1 1 "Dentate gyrus lateral blade, polymorph layer"
-790 126 208 75 1 1 1 "Dentate gyrus lateral blade, granule cell layer"
-799 126 208 75 1 1 1 "Dentate gyrus medial blade"
-807 126 208 75 1 1 1 "Dentate gyrus medial blade, molecular layer"
-815 126 208 75 1 1 1 "Dentate gyrus medial blade, polymorph layer"
-823 126 208 75 1 1 1 "Dentate gyrus medial blade, granule cell layer"
-982 126 208 75 1 1 1 "Fasciola cinerea"
-19 126 208 75 1 1 1 "Induseum griseum"
-822 50 184 37 1 1 1 "Retrohippocampal region"
-909 50 184 37 1 1 1 "Entorhinal area"
-918 50 184 37 1 1 1 "Entorhinal area, lateral part"
-1121 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 1"
-20 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2"
-999 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2/3"
-715 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2a"
-764 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 2b"
-52 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 3"
-92 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 4"
-312 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 4/5"
-139 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 5"
-387 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 5/6"
-28 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 6a"
-60 50 184 37 1 1 1 "Entorhinal area, lateral part, layer 6b"
-926 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone"
-526 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 1"
-543 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2"
-468 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2a"
-508 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 2b"
-664 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 3"
-712 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 4"
-727 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 5"
-550 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 5/6"
-743 50 184 37 1 1 1 "Entorhinal area, medial part, dorsal zone, layer 6"
-934 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone"
-259 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 1"
-324 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 2"
-371 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 3"
-419 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 4"
-1133 50 184 37 1 1 1 "Entorhinal area, medial part, ventral zone, layer 5/6"
-843 114 213 105 1 1 1 "Parasubiculum"
-10693 114 213 105 1 1 1 "Parasubiculum, layer 1"
-10694 114 213 105 1 1 1 "Parasubiculum, layer 2"
-10695 114 213 105 1 1 1 "Parasubiculum, layer 3"
-1037 72 200 60 1 1 1 "Postsubiculum"
-10696 72 200 60 1 1 1 "Postsubiculum, layer 1"
-10697 72 200 60 1 1 1 "Postsubiculum, layer 2"
-10698 72 200 60 1 1 1 "Postsubiculum, layer 3"
-1084 89 185 71 1 1 1 "Presubiculum"
-10699 89 185 71 1 1 1 "Presubiculum, layer 1"
-10700 89 185 71 1 1 1 "Presubiculum, layer 2"
-10701 89 185 71 1 1 1 "Presubiculum, layer 3"
-502 79 194 68 1 1 1 "Subiculum"
-509 79 194 68 1 1 1 "Subiculum, dorsal part"
-829 79 194 68 1 1 1 "Subiculum, dorsal part, molecular layer"
-845 75 181 71 1 1 1 "Subiculum, dorsal part, pyramidal layer"
-837 79 194 68 1 1 1 "Subiculum, dorsal part, stratum radiatum"
-518 79 194 68 1 1 1 "Subiculum, ventral part"
-853 79 194 68 1 1 1 "Subiculum, ventral part, molecular layer"
-870 75 181 71 1 1 1 "Subiculum, ventral part, pyramidal layer"
-861 79 194 68 1 1 1 "Subiculum, ventral part, stratum radiatum"
-484682470 88 186 72 1 1 1 "Prosubiculum"
-484682475 88 186 72 1 1 1 "Prosubiculum, dorsal part"
-484682479 88 186 72 1 1 1 "Prosubiculum, dorsal part, molecular layer"
-484682483 86 184 75 1 1 1 "Prosubiculum, dorsal part, pyramidal layer"
-484682487 88 186 72 1 1 1 "Prosubiculum, dorsal part, stratum radiatum"
-484682492 88 186 72 1 1 1 "Prosubiculum, ventral part"
-484682496 88 186 72 1 1 1 "Prosubiculum, ventral part, molecular layer"
-484682500 86 184 75 1 1 1 "Prosubiculum, ventral part, pyramidal layer"
-484682504 88 186 72 1 1 1 "Prosubiculum, ventral part, stratum radiatum"
-589508447 51 185 50 1 1 1 "Hippocampo-amygdalar transition area"
-484682508 51 185 50 1 1 1 "Area prostriata"
-703 138 218 135 1 1 1 "Cortical subplate"
-16 138 218 135 1 1 1 "Layer 6b, isocortex"
-583 138 218 135 1 1 1 "Claustrum"
-942 160 238 157 1 1 1 "Endopiriform nucleus"
-952 160 238 157 1 1 1 "Endopiriform nucleus, dorsal part"
-966 160 238 157 1 1 1 "Endopiriform nucleus, ventral part"
-131 144 235 141 1 1 1 "Lateral amygdalar nucleus"
-295 157 231 156 1 1 1 "Basolateral amygdalar nucleus"
-303 157 231 156 1 1 1 "Basolateral amygdalar nucleus, anterior part"
-311 157 231 156 1 1 1 "Basolateral amygdalar nucleus, posterior part"
-451 157 231 156 1 1 1 "Basolateral amygdalar nucleus, ventral part"
-319 132 234 129 1 1 1 "Basomedial amygdalar nucleus"
-327 132 234 129 1 1 1 "Basomedial amygdalar nucleus, anterior part"
-334 132 234 129 1 1 1 "Basomedial amygdalar nucleus, posterior part"
-780 151 236 147 1 1 1 "Posterior amygdalar nucleus"
-623 152 214 249 1 1 1 "Cerebral nuclei"
-477 152 214 249 1 1 1 "Striatum"
-485 152 214 249 1 1 1 "Striatum dorsal region"
-672 152 214 249 1 1 1 "Caudoputamen"
-493 128 205 248 1 1 1 "Striatum ventral region"
-56 128 205 248 1 1 1 "Nucleus accumbens"
-998 128 205 248 1 1 1 "Fundus of striatum"
-754 128 205 248 1 1 1 "Olfactory tubercle"
-481 128 205 248 1 1 1 "Islands of Calleja"
-489 128 205 248 1 1 1 "Major island of Calleja"
-144 128 205 248 1 1 1 "Olfactory tubercle, layers 1-3"
-458 128 205 248 1 1 1 "Olfactory tubercle, molecular layer"
-465 128 205 248 1 1 1 "Olfactory tubercle, pyramidal layer"
-473 128 205 248 1 1 1 "Olfactory tubercle, polymorph layer"
-549009199 128 205 248 1 1 1 "Lateral strip of striatum"
-275 144 203 237 1 1 1 "Lateral septal complex"
-242 144 203 237 1 1 1 "Lateral septal nucleus"
-250 144 203 237 1 1 1 "Lateral septal nucleus, caudal (caudodorsal) part"
-258 144 203 237 1 1 1 "Lateral septal nucleus, rostral (rostroventral) part"
-266 144 203 237 1 1 1 "Lateral septal nucleus, ventral part"
-310 144 203 237 1 1 1 "Septofimbrial nucleus"
-333 144 203 237 1 1 1 "Septohippocampal nucleus"
-278 128 192 226 1 1 1 "Striatum-like amygdalar nuclei"
-23 128 192 226 1 1 1 "Anterior amygdalar area"
-292 128 192 226 1 1 1 "Bed nucleus of the accessory olfactory tract"
-536 128 192 226 1 1 1 "Central amygdalar nucleus"
-544 128 192 226 1 1 1 "Central amygdalar nucleus, capsular part"
-551 128 192 226 1 1 1 "Central amygdalar nucleus, lateral part"
-559 128 192 226 1 1 1 "Central amygdalar nucleus, medial part"
-1105 128 192 226 1 1 1 "Intercalated amygdalar nucleus"
-403 128 192 226 1 1 1 "Medial amygdalar nucleus"
-411 128 192 226 1 1 1 "Medial amygdalar nucleus, anterodorsal part"
-418 128 192 226 1 1 1 "Medial amygdalar nucleus, anteroventral part"
-426 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part"
-472 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer a"
-480 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer b"
-487 128 192 226 1 1 1 "Medial amygdalar nucleus, posterodorsal part, sublayer c"
-435 128 192 226 1 1 1 "Medial amygdalar nucleus, posteroventral part"
-803 133 153 204 1 1 1 "Pallidum"
-818 133 153 204 1 1 1 "Pallidum, dorsal region"
-1022 133 153 204 1 1 1 "Globus pallidus, external segment"
-1031 133 153 204 1 1 1 "Globus pallidus, internal segment"
-835 162 177 216 1 1 1 "Pallidum, ventral region"
-342 162 177 216 1 1 1 "Substantia innominata"
-298 162 177 216 1 1 1 "Magnocellular nucleus"
-826 150 167 211 1 1 1 "Pallidum, medial region"
-904 150 167 211 1 1 1 "Medial septal complex"
-564 150 167 211 1 1 1 "Medial septal nucleus"
-596 150 167 211 1 1 1 "Diagonal band nucleus"
-581 150 167 211 1 1 1 "Triangular nucleus of septum"
-809 179 192 223 1 1 1 "Pallidum, caudal region"
-351 179 192 223 1 1 1 "Bed nuclei of the stria terminalis"
-359 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division"
-537 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, anterolateral area"
-498 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, anteromedial area"
-505 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus"
-513 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, fusiform nucleus"
-546 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus"
-521 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus"
-554 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, oval nucleus"
-562 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus"
-529 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, anterior division, ventral nucleus"
-367 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division"
-569 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, dorsal nucleus"
-578 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, principal nucleus"
-585 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus"
-594 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, transverse nucleus"
-602 179 192 223 1 1 1 "Bed nuclei of the stria terminalis, posterior division, strial extension"
-287 179 192 223 1 1 1 "Bed nucleus of the anterior commissure"
-343 255 112 128 1 1 1 "Brain stem"
-1129 255 112 128 1 1 1 "Interbrain"
-549 255 112 128 1 1 1 "Thalamus"
-864 255 128 132 1 1 1 "Thalamus, sensory-motor cortex related"
-637 255 128 132 1 1 1 "Ventral group of the dorsal thalamus"
-629 255 128 132 1 1 1 "Ventral anterior-lateral complex of the thalamus"
-685 255 128 132 1 1 1 "Ventral medial nucleus of the thalamus"
-709 255 128 132 1 1 1 "Ventral posterior complex of the thalamus"
-718 255 128 132 1 1 1 "Ventral posterolateral nucleus of the thalamus"
-725 255 128 132 1 1 1 "Ventral posterolateral nucleus of the thalamus, parvicellular part"
-733 255 128 132 1 1 1 "Ventral posteromedial nucleus of the thalamus"
-741 255 128 132 1 1 1 "Ventral posteromedial nucleus of the thalamus, parvicellular part"
-563807435 255 128 132 1 1 1 "Posterior triangular thalamic nucleus"
-406 255 128 132 1 1 1 "Subparafascicular nucleus"
-414 255 128 132 1 1 1 "Subparafascicular nucleus, magnocellular part"
-422 255 128 132 1 1 1 "Subparafascicular nucleus, parvicellular part"
-609 255 128 132 1 1 1 "Subparafascicular area"
-1044 255 128 132 1 1 1 "Peripeduncular nucleus"
-1008 255 128 132 1 1 1 "Geniculate group, dorsal thalamus"
-475 255 128 132 1 1 1 "Medial geniculate complex"
-1072 255 128 132 1 1 1 "Medial geniculate complex, dorsal part"
-1079 255 128 132 1 1 1 "Medial geniculate complex, ventral part"
-1088 255 128 132 1 1 1 "Medial geniculate complex, medial part"
-170 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex"
-496345664 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, shell"
-496345668 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, core"
-496345672 255 128 132 1 1 1 "Dorsal part of the lateral geniculate complex, ipsilateral zone"
-856 255 144 159 1 1 1 "Thalamus, polymodal association cortex related"
-138 255 144 159 1 1 1 "Lateral group of the dorsal thalamus"
-218 255 144 159 1 1 1 "Lateral posterior nucleus of the thalamus"
-1020 255 144 159 1 1 1 "Posterior complex of the thalamus"
-1029 255 144 159 1 1 1 "Posterior limiting nucleus of the thalamus"
-325 255 144 159 1 1 1 "Suprageniculate nucleus"
-560581551 255 144 159 1 1 1 "Ethmoid nucleus of the thalamus"
-560581555 255 144 159 1 1 1 "Retroethmoid nucleus"
-239 255 144 159 1 1 1 "Anterior group of the dorsal thalamus"
-255 255 144 159 1 1 1 "Anteroventral nucleus of thalamus"
-127 255 144 159 1 1 1 "Anteromedial nucleus"
-1096 255 144 159 1 1 1 "Anteromedial nucleus, dorsal part"
-1104 255 144 159 1 1 1 "Anteromedial nucleus, ventral part"
-64 255 144 159 1 1 1 "Anterodorsal nucleus"
-1120 255 144 159 1 1 1 "Interanteromedial nucleus of the thalamus"
-1113 255 144 159 1 1 1 "Interanterodorsal nucleus of the thalamus"
-155 255 144 159 1 1 1 "Lateral dorsal nucleus of thalamus"
-444 255 144 159 1 1 1 "Medial group of the dorsal thalamus"
-59 255 144 159 1 1 1 "Intermediodorsal nucleus of the thalamus"
-362 255 144 159 1 1 1 "Mediodorsal nucleus of thalamus"
-617 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, central part"
-626 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, lateral part"
-636 255 144 159 1 1 1 "Mediodorsal nucleus of the thalamus, medial part"
-366 255 144 159 1 1 1 "Submedial nucleus of the thalamus"
-1077 255 144 159 1 1 1 "Perireunensis nucleus"
-571 255 144 159 1 1 1 "Midline group of the dorsal thalamus"
-149 255 144 159 1 1 1 "Paraventricular nucleus of the thalamus"
-15 255 144 159 1 1 1 "Parataenial nucleus"
-181 255 144 159 1 1 1 "Nucleus of reuniens"
-560581559 255 144 159 1 1 1 "Xiphoid thalamic nucleus"
-51 255 144 159 1 1 1 "Intralaminar nuclei of the dorsal thalamus"
-189 255 144 159 1 1 1 "Rhomboid nucleus"
-599 255 144 159 1 1 1 "Central medial nucleus of the thalamus"
-907 255 144 159 1 1 1 "Paracentral nucleus"
-575 255 144 159 1 1 1 "Central lateral nucleus of the thalamus"
-930 255 144 159 1 1 1 "Parafascicular nucleus"
-560581563 255 144 159 1 1 1 "Posterior intralaminar thalamic nucleus"
-262 255 144 159 1 1 1 "Reticular nucleus of the thalamus"
-1014 255 144 159 1 1 1 "Geniculate group, ventral thalamus"
-27 255 144 159 1 1 1 "Intergeniculate leaflet of the lateral geniculate complex"
-563807439 255 144 159 1 1 1 "Intermediate geniculate nucleus"
-178 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex"
-300 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex, lateral zone"
-316 255 144 159 1 1 1 "Ventral part of the lateral geniculate complex, medial zone"
-321 255 144 159 1 1 1 "Subgeniculate nucleus"
-958 255 144 159 1 1 1 "Epithalamus"
-483 255 144 159 1 1 1 "Medial habenula"
-186 255 144 159 1 1 1 "Lateral habenula"
-953 255 144 159 1 1 1 "Pineal body"
-1097 230 68 56 1 1 1 "Hypothalamus"
-157 255 93 80 1 1 1 "Periventricular zone"
-390 255 93 80 1 1 1 "Supraoptic nucleus"
-332 255 93 80 1 1 1 "Accessory supraoptic group"
-432 255 93 80 1 1 1 "Nucleus circularis"
-38 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus"
-71 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division"
-47 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part"
-79 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part"
-103 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part"
-652 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone"
-660 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, medial zone"
-94 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division"
-55 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, anterior parvicellular part"
-87 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone"
-110 255 93 80 1 1 1 "Paraventricular hypothalamic nucleus, parvicellular division, periventricular part"
-30 255 93 80 1 1 1 "Periventricular hypothalamic nucleus, anterior part"
-118 255 93 80 1 1 1 "Periventricular hypothalamic nucleus, intermediate part"
-223 255 93 80 1 1 1 "Arcuate hypothalamic nucleus"
-141 255 85 71 1 1 1 "Periventricular region"
-72 255 85 71 1 1 1 "Anterodorsal preoptic nucleus"
-80 255 85 71 1 1 1 "Anterior hypothalamic area"
-263 255 85 71 1 1 1 "Anteroventral preoptic nucleus"
-272 255 85 71 1 1 1 "Anteroventral periventricular nucleus"
-830 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus"
-668 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, anterior part"
-676 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, posterior part"
-684 255 85 71 1 1 1 "Dorsomedial nucleus of the hypothalamus, ventral part"
-452 255 85 71 1 1 1 "Median preoptic nucleus"
-523 255 85 71 1 1 1 "Medial preoptic area"
-763 255 85 71 1 1 1 "Vascular organ of the lamina terminalis"
-914 255 85 71 1 1 1 "Posterodorsal preoptic nucleus"
-1109 255 85 71 1 1 1 "Parastrial nucleus"
-1124 255 85 71 1 1 1 "Suprachiasmatic preoptic nucleus"
-126 255 85 71 1 1 1 "Periventricular hypothalamic nucleus, posterior part"
-133 255 85 71 1 1 1 "Periventricular hypothalamic nucleus, preoptic part"
-347 255 85 71 1 1 1 "Subparaventricular zone"
-286 255 85 71 1 1 1 "Suprachiasmatic nucleus"
-338 255 85 71 1 1 1 "Subfornical organ"
-576073699 255 85 71 1 1 1 "Ventromedial preoptic nucleus"
-689 255 85 71 1 1 1 "Ventrolateral preoptic nucleus"
-467 255 76 62 1 1 1 "Hypothalamic medial zone"
-88 255 76 62 1 1 1 "Anterior hypothalamic nucleus"
-700 255 76 62 1 1 1 "Anterior hypothalamic nucleus, anterior part"
-708 255 76 62 1 1 1 "Anterior hypothalamic nucleus, central part"
-716 255 76 62 1 1 1 "Anterior hypothalamic nucleus, dorsal part"
-724 255 76 62 1 1 1 "Anterior hypothalamic nucleus, posterior part"
-331 255 76 62 1 1 1 "Mammillary body"
-210 255 76 62 1 1 1 "Lateral mammillary nucleus"
-491 255 76 62 1 1 1 "Medial mammillary nucleus"
-732 255 76 62 1 1 1 "Medial mammillary nucleus, median part"
-606826647 255 76 62 1 1 1 "Medial mammillary nucleus, lateral part"
-606826651 255 76 62 1 1 1 "Medial mammillary nucleus, medial part"
-606826655 255 76 62 1 1 1 "Medial mammillary nucleus, posterior part"
-606826659 255 76 62 1 1 1 "Medial mammillary nucleus, dorsal part"
-525 255 76 62 1 1 1 "Supramammillary nucleus"
-1110 255 76 62 1 1 1 "Supramammillary nucleus, lateral part"
-1118 255 76 62 1 1 1 "Supramammillary nucleus, medial part"
-557 255 76 62 1 1 1 "Tuberomammillary nucleus"
-1126 255 76 62 1 1 1 "Tuberomammillary nucleus, dorsal part"
-1 255 76 62 1 1 1 "Tuberomammillary nucleus, ventral part"
-515 255 76 62 1 1 1 "Medial preoptic nucleus"
-740 255 76 62 1 1 1 "Medial preoptic nucleus, central part"
-748 255 76 62 1 1 1 "Medial preoptic nucleus, lateral part"
-756 255 76 62 1 1 1 "Medial preoptic nucleus, medial part"
-980 255 76 62 1 1 1 "Dorsal premammillary nucleus"
-1004 255 76 62 1 1 1 "Ventral premammillary nucleus"
-63 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division"
-439 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part"
-447 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, forniceal part"
-455 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, lateral parvicellular part"
-464 255 76 62 1 1 1 "Paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone"
-693 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus"
-761 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, anterior part"
-769 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, central part"
-777 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, dorsomedial part"
-785 255 76 62 1 1 1 "Ventromedial hypothalamic nucleus, ventrolateral part"
-946 255 76 62 1 1 1 "Posterior hypothalamic nucleus"
-290 242 72 59 1 1 1 "Hypothalamic lateral zone"
-194 242 72 59 1 1 1 "Lateral hypothalamic area"
-226 242 72 59 1 1 1 "Lateral preoptic area"
-356 242 72 59 1 1 1 "Preparasubthalamic nucleus"
-364 242 72 59 1 1 1 "Parasubthalamic nucleus"
-576073704 242 72 59 1 1 1 "Perifornical nucleus"
-173 242 72 59 1 1 1 "Retrochiasmatic area"
-470 242 72 59 1 1 1 "Subthalamic nucleus"
-614 242 72 59 1 1 1 "Tuberal nucleus"
-797 242 72 59 1 1 1 "Zona incerta"
-796 242 72 59 1 1 1 "Dopaminergic A13 group"
-804 242 72 59 1 1 1 "Fields of Forel"
-10671 242 72 59 1 1 1 "Median eminence"
-313 255 100 255 1 1 1 "Midbrain"
-339 255 122 255 1 1 1 "Midbrain, sensory related"
-302 255 122 255 1 1 1 "Superior colliculus, sensory related"
-851 255 122 255 1 1 1 "Superior colliculus, optic layer"
-842 255 122 255 1 1 1 "Superior colliculus, superficial gray layer"
-834 255 122 255 1 1 1 "Superior colliculus, zonal layer"
-4 255 122 255 1 1 1 "Inferior colliculus"
-811 255 122 255 1 1 1 "Inferior colliculus, central nucleus"
-820 255 122 255 1 1 1 "Inferior colliculus, dorsal nucleus"
-828 255 122 255 1 1 1 "Inferior colliculus, external nucleus"
-580 255 122 255 1 1 1 "Nucleus of the brachium of the inferior colliculus"
-271 255 122 255 1 1 1 "Nucleus sagulum"
-874 255 122 255 1 1 1 "Parabigeminal nucleus"
-460 255 122 255 1 1 1 "Midbrain trigeminal nucleus"
-599626923 255 122 255 1 1 1 "Subcommissural organ"
-323 255 144 255 1 1 1 "Midbrain, motor related"
-381 255 144 255 1 1 1 "Substantia nigra, reticular part"
-749 255 144 255 1 1 1 "Ventral tegmental area"
-607344830 255 144 255 1 1 1 "Paranigral nucleus"
-246 255 144 255 1 1 1 "Midbrain reticular nucleus, retrorubral area"
-128 255 144 255 1 1 1 "Midbrain reticular nucleus"
-539 255 144 255 1 1 1 "Midbrain reticular nucleus, magnocellular part"
-548 255 144 255 1 1 1 "Midbrain reticular nucleus, magnocellular part, general"
-555 255 144 255 1 1 1 "Midbrain reticular nucleus, parvicellular part"
-294 255 144 255 1 1 1 "Superior colliculus, motor related"
-26 255 144 255 1 1 1 "Superior colliculus, motor related, deep gray layer"
-42 255 144 255 1 1 1 "Superior colliculus, motor related, deep white layer"
-17 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate white layer"
-10 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer"
-494 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer a"
-503 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer b"
-511 255 144 255 1 1 1 "Superior colliculus, motor related, intermediate gray layer, sublayer c"
-795 255 144 255 1 1 1 "Periaqueductal gray"
-50 255 144 255 1 1 1 "Precommissural nucleus"
-67 255 144 255 1 1 1 "Interstitial nucleus of Cajal"
-587 255 144 255 1 1 1 "Nucleus of Darkschewitsch"
-614454277 255 144 255 1 1 1 "Supraoculomotor periaqueductal gray"
-1100 255 144 255 1 1 1 "Pretectal region"
-215 255 144 255 1 1 1 "Anterior pretectal nucleus"
-531 255 144 255 1 1 1 "Medial pretectal area"
-628 255 144 255 1 1 1 "Nucleus of the optic tract"
-634 255 144 255 1 1 1 "Nucleus of the posterior commissure"
-706 255 144 255 1 1 1 "Olivary pretectal nucleus"
-1061 255 144 255 1 1 1 "Posterior pretectal nucleus"
-549009203 255 144 255 1 1 1 "Retroparafascicular nucleus"
-549009207 255 144 255 1 1 1 "Intercollicular nucleus"
-616 255 144 255 1 1 1 "Cuneiform nucleus"
-214 255 144 255 1 1 1 "Red nucleus"
-35 255 144 255 1 1 1 "Oculomotor nucleus"
-549009211 255 144 255 1 1 1 "Medial accesory oculomotor nucleus"
-975 255 144 255 1 1 1 "Edinger-Westphal nucleus"
-115 255 144 255 1 1 1 "Trochlear nucleus"
-606826663 255 144 255 1 1 1 "Paratrochlear nucleus"
-757 255 144 255 1 1 1 "Ventral tegmental nucleus"
-231 255 144 255 1 1 1 "Anterior tegmental nucleus"
-66 255 144 255 1 1 1 "Lateral terminal nucleus of the accessory optic tract"
-75 255 144 255 1 1 1 "Dorsal terminal nucleus of the accessory optic tract"
-58 255 144 255 1 1 1 "Medial terminal nucleus of the accessory optic tract"
-615 255 144 255 1 1 1 "Substantia nigra, lateral part"
-348 255 144 255 1 1 1 "Midbrain, behavioral state related"
-374 255 166 255 1 1 1 "Substantia nigra, compact part"
-1052 255 166 255 1 1 1 "Pedunculopontine nucleus"
-165 255 166 255 1 1 1 "Midbrain raphe nuclei"
-12 255 166 255 1 1 1 "Interfascicular nucleus raphe"
-100 255 166 255 1 1 1 "Interpeduncular nucleus"
-607344834 255 166 255 1 1 1 "Interpeduncular nucleus, rostral"
-607344838 255 166 255 1 1 1 "Interpeduncular nucleus, caudal"
-607344842 255 166 255 1 1 1 "Interpeduncular nucleus, apical"
-607344846 255 166 255 1 1 1 "Interpeduncular nucleus, lateral"
-607344850 255 166 255 1 1 1 "Interpeduncular nucleus, intermediate"
-607344854 255 166 255 1 1 1 "Interpeduncular nucleus, dorsomedial"
-607344858 255 166 255 1 1 1 "Interpeduncular nucleus, dorsolateral"
-607344862 255 166 255 1 1 1 "Interpeduncular nucleus, rostrolateral"
-197 255 166 255 1 1 1 "Rostral linear nucleus raphe"
-591 255 166 255 1 1 1 "Central linear nucleus raphe"
-872 255 166 255 1 1 1 "Dorsal nucleus raphe"
-1065 255 155 136 1 1 1 "Hindbrain"
-771 255 155 136 1 1 1 "Pons"
-1132 255 174 111 1 1 1 "Pons, sensory related"
-612 255 174 111 1 1 1 "Nucleus of the lateral lemniscus"
-82 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, dorsal part"
-90 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, horizontal part"
-99 255 174 111 1 1 1 "Nucleus of the lateral lemniscus, ventral part"
-7 255 174 111 1 1 1 "Principal sensory nucleus of the trigeminal"
-867 255 174 111 1 1 1 "Parabrachial nucleus"
-123 255 174 111 1 1 1 "Koelliker-Fuse subnucleus"
-881 255 174 111 1 1 1 "Parabrachial nucleus, lateral division"
-860 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, central lateral part"
-868 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, dorsal lateral part"
-875 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, external lateral part"
-883 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, superior lateral part"
-891 255 174 111 1 1 1 "Parabrachial nucleus, lateral division, ventral lateral part"
-890 255 174 111 1 1 1 "Parabrachial nucleus, medial division"
-899 255 174 111 1 1 1 "Parabrachial nucleus, medial division, external medial part"
-915 255 174 111 1 1 1 "Parabrachial nucleus, medial division, medial medial part"
-923 255 174 111 1 1 1 "Parabrachial nucleus, medial division, ventral medial part"
-398 255 174 111 1 1 1 "Superior olivary complex"
-122 255 174 111 1 1 1 "Superior olivary complex, periolivary region"
-105 255 174 111 1 1 1 "Superior olivary complex, medial part"
-114 255 174 111 1 1 1 "Superior olivary complex, lateral part"
-987 255 186 134 1 1 1 "Pons, motor related"
-280 255 186 134 1 1 1 "Barrington's nucleus"
-880 255 186 134 1 1 1 "Dorsal tegmental nucleus"
-283 255 186 134 1 1 1 "Lateral tegmental nucleus"
-599626927 255 186 134 1 1 1 "Posterodorsal tegmental nucleus"
-898 255 186 134 1 1 1 "Pontine central gray"
-931 255 186 134 1 1 1 "Pontine gray"
-1093 255 186 134 1 1 1 "Pontine reticular nucleus, caudal part"
-552 255 186 134 1 1 1 "Pontine reticular nucleus, ventral part"
-318 255 186 134 1 1 1 "Supragenual nucleus"
-462 255 186 134 1 1 1 "Superior salivatory nucleus"
-534 255 186 134 1 1 1 "Supratrigeminal nucleus"
-574 255 186 134 1 1 1 "Tegmental reticular nucleus"
-621 255 186 134 1 1 1 "Motor nucleus of trigeminal"
-549009215 255 186 134 1 1 1 "Peritrigeminal zone"
-549009219 255 186 134 1 1 1 "Accessory trigeminal nucleus"
-549009223 255 186 134 1 1 1 "Parvicellular motor 5 nucleus"
-549009227 255 186 134 1 1 1 "Intertrigeminal nucleus"
-1117 255 195 149 1 1 1 "Pons, behavioral state related"
-679 255 195 149 1 1 1 "Superior central nucleus raphe"
-137 255 195 149 1 1 1 "Superior central nucleus raphe, lateral part"
-130 255 195 149 1 1 1 "Superior central nucleus raphe, medial part"
-147 255 195 149 1 1 1 "Locus ceruleus"
-162 255 195 149 1 1 1 "Laterodorsal tegmental nucleus"
-604 255 195 149 1 1 1 "Nucleus incertus"
-146 255 195 149 1 1 1 "Pontine reticular nucleus"
-238 255 195 149 1 1 1 "Nucleus raphe pontis"
-350 255 195 149 1 1 1 "Subceruleus nucleus"
-358 255 195 149 1 1 1 "Sublaterodorsal nucleus"
-354 255 155 205 1 1 1 "Medulla"
-386 255 165 210 1 1 1 "Medulla, sensory related"
-207 255 165 210 1 1 1 "Area postrema"
-607 255 165 210 1 1 1 "Cochlear nuclei"
-112 255 165 210 1 1 1 "Granular lamina of the cochlear nuclei"
-560 255 165 210 1 1 1 "Cochlear nucleus, subpedunclular granular region"
-96 255 165 210 1 1 1 "Dorsal cochlear nucleus"
-101 255 165 210 1 1 1 "Ventral cochlear nucleus"
-720 255 165 210 1 1 1 "Dorsal column nuclei"
-711 255 165 210 1 1 1 "Cuneate nucleus"
-1039 255 165 210 1 1 1 "Gracile nucleus"
-903 255 165 210 1 1 1 "External cuneate nucleus"
-642 255 165 210 1 1 1 "Nucleus of the trapezoid body"
-651 255 165 210 1 1 1 "Nucleus of the solitary tract"
-659 255 165 210 1 1 1 "Nucleus of the solitary tract, central part"
-666 255 165 210 1 1 1 "Nucleus of the solitary tract, commissural part"
-674 255 165 210 1 1 1 "Nucleus of the solitary tract, gelatinous part"
-682 255 165 210 1 1 1 "Nucleus of the solitary tract, lateral part"
-691 255 165 210 1 1 1 "Nucleus of the solitary tract, medial part"
-429 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, caudal part"
-437 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, interpolar part"
-445 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part"
-77 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, caudal dorsomedial part"
-53 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, dorsal zone"
-61 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone"
-45 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part"
-69 255 165 210 1 1 1 "Spinal nucleus of the trigeminal, oral part, ventrolateral part"
-589508451 255 165 210 1 1 1 "Paratrigeminal nucleus"
-789 255 165 210 1 1 1 "Nucleus z"
-370 255 179 217 1 1 1 "Medulla, motor related"
-653 255 179 217 1 1 1 "Abducens nucleus"
-568 255 179 217 1 1 1 "Accessory abducens nucleus"
-661 255 179 217 1 1 1 "Facial motor nucleus"
-576 255 179 217 1 1 1 "Accessory facial motor nucleus"
-640 255 179 217 1 1 1 "Efferent vestibular nucleus"
-135 255 179 217 1 1 1 "Nucleus ambiguus"
-939 255 179 217 1 1 1 "Nucleus ambiguus, dorsal division"
-143 255 179 217 1 1 1 "Nucleus ambiguus, ventral division"
-839 255 179 217 1 1 1 "Dorsal motor nucleus of the vagus nerve"
-887 255 179 217 1 1 1 "Efferent cochlear group"
-1048 255 179 217 1 1 1 "Gigantocellular reticular nucleus"
-372 255 179 217 1 1 1 "Infracerebellar nucleus"
-83 255 179 217 1 1 1 "Inferior olivary complex"
-136 255 179 217 1 1 1 "Intermediate reticular nucleus"
-106 255 179 217 1 1 1 "Inferior salivatory nucleus"
-203 255 179 217 1 1 1 "Linear nucleus of the medulla"
-235 255 179 217 1 1 1 "Lateral reticular nucleus"
-955 255 179 217 1 1 1 "Lateral reticular nucleus, magnocellular part"
-963 255 179 217 1 1 1 "Lateral reticular nucleus, parvicellular part"
-307 255 179 217 1 1 1 "Magnocellular reticular nucleus"
-395 255 179 217 1 1 1 "Medullary reticular nucleus"
-1098 255 179 217 1 1 1 "Medullary reticular nucleus, dorsal part"
-1107 255 179 217 1 1 1 "Medullary reticular nucleus, ventral part"
-852 255 179 217 1 1 1 "Parvicellular reticular nucleus"
-859 255 179 217 1 1 1 "Parasolitary nucleus"
-938 255 179 217 1 1 1 "Paragigantocellular reticular nucleus"
-970 255 179 217 1 1 1 "Paragigantocellular reticular nucleus, dorsal part"
-978 255 179 217 1 1 1 "Paragigantocellular reticular nucleus, lateral part"
-154 255 179 217 1 1 1 "Perihypoglossal nuclei"
-161 255 179 217 1 1 1 "Nucleus intercalatus"
-177 255 179 217 1 1 1 "Nucleus of Roller"
-169 255 179 217 1 1 1 "Nucleus prepositus"
-995 255 179 217 1 1 1 "Paramedian reticular nucleus"
-1069 255 179 217 1 1 1 "Parapyramidal nucleus"
-185 255 179 217 1 1 1 "Parapyramidal nucleus, deep part"
-193 255 179 217 1 1 1 "Parapyramidal nucleus, superficial part"
-701 255 179 217 1 1 1 "Vestibular nuclei"
-209 255 179 217 1 1 1 "Lateral vestibular nucleus"
-202 255 179 217 1 1 1 "Medial vestibular nucleus"
-225 255 179 217 1 1 1 "Spinal vestibular nucleus"
-217 255 179 217 1 1 1 "Superior vestibular nucleus"
-765 255 179 217 1 1 1 "Nucleus x"
-773 255 179 217 1 1 1 "Hypoglossal nucleus"
-781 255 179 217 1 1 1 "Nucleus y"
-76 255 179 217 1 1 1 "Interstitial nucleus of the vestibular nerve"
-379 255 198 226 1 1 1 "Medulla, behavioral state related"
-206 255 198 226 1 1 1 "Nucleus raphe magnus"
-230 255 198 226 1 1 1 "Nucleus raphe pallidus"
-222 255 198 226 1 1 1 "Nucleus raphe obscurus"
-512 240 240 128 1 1 1 "Cerebellum"
-528 240 240 128 1 1 1 "Cerebellar cortex"
-1144 255 252 145 1 1 1 "Cerebellar cortex, molecular layer"
-1145 255 252 145 1 1 1 "Cerebellar cortex, Purkinje layer"
-1143 236 231 84 1 1 1 "Cerebellar cortex, granular layer"
-645 255 252 145 1 1 1 "Vermal regions"
-912 255 252 145 1 1 1 "Lingula (I)"
-10707 255 252 145 1 1 1 "Lingula (I), molecular layer"
-10706 255 252 145 1 1 1 "Lingula (I), Purkinje layer"
-10705 236 231 84 1 1 1 "Lingula (I), granular layer"
-920 255 252 145 1 1 1 "Central lobule"
-976 255 252 145 1 1 1 "Lobule II"
-10710 255 252 145 1 1 1 "Lobule II, molecular layer"
-10709 255 252 145 1 1 1 "Lobule II, Purkinje layer"
-10708 236 231 84 1 1 1 "Lobule II, granular layer"
-984 255 252 145 1 1 1 "Lobule III"
-10713 255 252 145 1 1 1 "Lobule III, molecular layer"
-10712 255 252 145 1 1 1 "Lobule III, Purkinje layer"
-10711 236 231 84 1 1 1 "Lobule III, granular layer"
-928 255 252 145 1 1 1 "Culmen"
-992 255 252 145 1 1 1 "Lobule IV"
-10716 255 252 145 1 1 1 "Lobule IV, molecular layer"
-10715 255 252 145 1 1 1 "Lobule IV, Purkinje layer"
-10714 236 231 84 1 1 1 "Lobule IV, granular layer"
-1001 255 252 145 1 1 1 "Lobule V"
-10719 255 252 145 1 1 1 "Lobule V, molecular layer"
-10718 255 252 145 1 1 1 "Lobule V, Purkinje layer"
-10717 236 231 84 1 1 1 "Lobule V, granular layer"
-1091 255 252 145 1 1 1 "Lobules IV-V"
-10722 255 252 145 1 1 1 "Lobules IV-V, molecular layer"
-10721 255 252 145 1 1 1 "Lobules IV-V, Purkinje layer"
-10720 236 231 84 1 1 1 "Lobules IV-V, granular layer"
-936 255 252 145 1 1 1 "Declive (VI)"
-10725 255 252 145 1 1 1 "Declive (VI), molecular layer"
-10724 255 252 145 1 1 1 "Declive (VI), Purkinje layer"
-10723 236 231 84 1 1 1 "Declive (VI), granular layer"
-944 255 252 145 1 1 1 "Folium-tuber vermis (VII)"
-10728 255 252 145 1 1 1 "Folium-tuber vermis (VII), molecular layer"
-10727 255 252 145 1 1 1 "Folium-tuber vermis (VII), Purkinje layer"
-10726 236 231 84 1 1 1 "Folium-tuber vermis (VII), granular layer"
-951 255 252 145 1 1 1 "Pyramus (VIII)"
-10731 255 252 145 1 1 1 "Pyramus (VIII), molecular layer"
-10730 255 252 145 1 1 1 "Pyramus (VIII), Purkinje layer"
-10729 236 231 84 1 1 1 "Pyramus (VIII), granular layer"
-957 255 252 145 1 1 1 "Uvula (IX)"
-10734 255 252 145 1 1 1 "Uvula (IX), molecular layer"
-10733 255 252 145 1 1 1 "Uvula (IX), Purkinje layer"
-10732 236 231 84 1 1 1 "Uvula (IX), granular layer"
-968 255 252 145 1 1 1 "Nodulus (X)"
-10737 255 252 145 1 1 1 "Nodulus (X), molecular layer"
-10736 255 252 145 1 1 1 "Nodulus (X), Purkinje layer"
-10735 236 231 84 1 1 1 "Nodulus (X), granular layer"
-1073 255 252 145 1 1 1 "Hemispheric regions"
-1007 255 252 145 1 1 1 "Simple lobule"
-10674 255 252 145 1 1 1 "Simple lobule, molecular layer"
-10673 255 252 145 1 1 1 "Simple lobule, Purkinje layer"
-10672 236 231 84 1 1 1 "Simple lobule, granular layer"
-1017 255 252 145 1 1 1 "Ansiform lobule"
-1056 255 252 145 1 1 1 "Crus 1"
-10677 255 252 145 1 1 1 "Crus 1, molecular layer"
-10676 255 252 145 1 1 1 "Crus 1, Purkinje layer"
-10675 236 231 84 1 1 1 "Crus 1, granular layer"
-1064 255 252 145 1 1 1 "Crus 2"
-10680 255 252 145 1 1 1 "Crus 2, molecular layer"
-10679 255 252 145 1 1 1 "Crus 2, Purkinje layer"
-10678 236 231 84 1 1 1 "Crus 2, granular layer"
-1025 255 252 145 1 1 1 "Paramedian lobule"
-10683 255 252 145 1 1 1 "Paramedian lobule, molecular layer"
-10682 255 252 145 1 1 1 "Paramedian lobule, Purkinje layer"
-10681 236 231 84 1 1 1 "Paramedian lobule, granular layer"
-1033 255 252 145 1 1 1 "Copula pyramidis"
-10686 255 252 145 1 1 1 "Copula pyramidis, molecular layer"
-10685 255 252 145 1 1 1 "Copula pyramidis, Purkinje layer"
-10684 236 231 84 1 1 1 "Copula pyramidis, granular layer"
-1041 255 252 145 1 1 1 "Paraflocculus"
-10689 255 252 145 1 1 1 "Paraflocculus, molecular layer"
-10688 255 252 145 1 1 1 "Paraflocculus, Purkinje layer"
-10687 236 231 84 1 1 1 "Paraflocculus, granular layer"
-1049 255 252 145 1 1 1 "Flocculus"
-10692 255 252 145 1 1 1 "Flocculus, molecular layer"
-10691 255 252 145 1 1 1 "Flocculus, Purkinje layer"
-10690 236 231 84 1 1 1 "Flocculus, granular layer"
-519 240 240 128 1 1 1 "Cerebellar nuclei"
-989 255 253 188 1 1 1 "Fastigial nucleus"
-91 255 253 188 1 1 1 "Interposed nucleus"
-846 255 253 188 1 1 1 "Dentate nucleus"
-589508455 255 253 188 1 1 1 "Vestibulocerebellar nucleus"
-1009 204 204 204 1 1 1 "fiber tracts"
-967 204 204 204 1 1 1 "cranial nerves"
-885 204 204 204 1 1 1 "terminal nerve"
-949 204 204 204 1 1 1 "vomeronasal nerve"
-840 204 204 204 1 1 1 "olfactory nerve"
-1016 204 204 204 1 1 1 "olfactory nerve layer of main olfactory bulb"
-21 204 204 204 1 1 1 "lateral olfactory tract, general"
-665 204 204 204 1 1 1 "lateral olfactory tract, body"
-538 204 204 204 1 1 1 "dorsal limb"
-459 204 204 204 1 1 1 "accessory olfactory tract"
-900 204 204 204 1 1 1 "anterior commissure, olfactory limb"
-848 204 204 204 1 1 1 "optic nerve"
-876 204 204 204 1 1 1 "accessory optic tract"
-916 204 204 204 1 1 1 "brachium of the superior colliculus"
-336 204 204 204 1 1 1 "superior colliculus commissure"
-117 204 204 204 1 1 1 "optic chiasm"
-125 204 204 204 1 1 1 "optic tract"
-357 204 204 204 1 1 1 "tectothalamic pathway"
-832 204 204 204 1 1 1 "oculomotor nerve"
-62 204 204 204 1 1 1 "medial longitudinal fascicle"
-158 204 204 204 1 1 1 "posterior commissure"
-911 204 204 204 1 1 1 "trochlear nerve"
-384 204 204 204 1 1 1 "trochlear nerve decussation"
-710 204 204 204 1 1 1 "abducens nerve"
-901 204 204 204 1 1 1 "trigeminal nerve"
-93 204 204 204 1 1 1 "motor root of the trigeminal nerve"
-229 204 204 204 1 1 1 "sensory root of the trigeminal nerve"
-705 204 204 204 1 1 1 "midbrain tract of the trigeminal nerve"
-794 204 204 204 1 1 1 "spinal tract of the trigeminal nerve"
-798 204 204 204 1 1 1 "facial nerve"
-1131 204 204 204 1 1 1 "intermediate nerve"
-1116 204 204 204 1 1 1 "genu of the facial nerve"
-933 204 204 204 1 1 1 "vestibulocochlear nerve"
-1076 204 204 204 1 1 1 "efferent cochleovestibular bundle"
-413 204 204 204 1 1 1 "vestibular nerve"
-948 204 204 204 1 1 1 "cochlear nerve"
-841 204 204 204 1 1 1 "trapezoid body"
-641 204 204 204 1 1 1 "intermediate acoustic stria"
-506 204 204 204 1 1 1 "dorsal acoustic stria"
-658 204 204 204 1 1 1 "lateral lemniscus"
-633 204 204 204 1 1 1 "inferior colliculus commissure"
-482 204 204 204 1 1 1 "brachium of the inferior colliculus"
-808 204 204 204 1 1 1 "glossopharyngeal nerve"
-917 204 204 204 1 1 1 "vagus nerve"
-237 204 204 204 1 1 1 "solitary tract"
-717 204 204 204 1 1 1 "accessory spinal nerve"
-813 204 204 204 1 1 1 "hypoglossal nerve"
-925 204 204 204 1 1 1 "ventral roots"
-792 204 204 204 1 1 1 "dorsal roots"
-932 204 204 204 1 1 1 "cervicothalamic tract"
-570 204 204 204 1 1 1 "dorsolateral fascicle"
-522 204 204 204 1 1 1 "dorsal commissure of the spinal cord"
-858 204 204 204 1 1 1 "ventral commissure of the spinal cord"
-586 204 204 204 1 1 1 "fasciculus proprius"
-514 204 204 204 1 1 1 "dorsal column"
-380 204 204 204 1 1 1 "cuneate fascicle"
-388 204 204 204 1 1 1 "gracile fascicle"
-396 204 204 204 1 1 1 "internal arcuate fibers"
-697 204 204 204 1 1 1 "medial lemniscus"
-871 204 204 204 1 1 1 "spinothalamic tract"
-29 204 204 204 1 1 1 "lateral spinothalamic tract"
-389 204 204 204 1 1 1 "ventral spinothalamic tract"
-245 204 204 204 1 1 1 "spinocervical tract"
-261 204 204 204 1 1 1 "spino-olivary pathway"
-270 204 204 204 1 1 1 "spinoreticular pathway"
-293 204 204 204 1 1 1 "spinovestibular pathway"
-277 204 204 204 1 1 1 "spinotectal pathway"
-253 204 204 204 1 1 1 "spinohypothalamic pathway"
-285 204 204 204 1 1 1 "spinotelenchephalic pathway"
-627 204 204 204 1 1 1 "hypothalamohypophysial tract"
-960 204 204 204 1 1 1 "cerebellum related fiber tracts"
-744 204 204 204 1 1 1 "cerebellar commissure"
-752 204 204 204 1 1 1 "cerebellar peduncles"
-326 204 204 204 1 1 1 "superior cerebelar peduncles"
-812 204 204 204 1 1 1 "superior cerebellar peduncle decussation"
-85 204 204 204 1 1 1 "spinocerebellar tract"
-850 204 204 204 1 1 1 "uncinate fascicle"
-866 204 204 204 1 1 1 "ventral spinocerebellar tract"
-78 204 204 204 1 1 1 "middle cerebellar peduncle"
-1123 204 204 204 1 1 1 "inferior cerebellar peduncle"
-553 204 204 204 1 1 1 "dorsal spinocerebellar tract"
-499 204 204 204 1 1 1 "cuneocerebellar tract"
-650 204 204 204 1 1 1 "juxtarestiform body"
-490 204 204 204 1 1 1 "bulbocerebellar tract"
-404 204 204 204 1 1 1 "olivocerebellar tract"
-410 204 204 204 1 1 1 "reticulocerebellar tract"
-373 204 204 204 1 1 1 "trigeminocerebellar tract"
-728 204 204 204 1 1 1 "arbor vitae"
-484682512 204 204 204 1 1 1 "supra-callosal cerebral white matter"
-983 204 204 204 1 1 1 "lateral forebrain bundle system"
-776 204 204 204 1 1 1 "corpus callosum"
-956 204 204 204 1 1 1 "corpus callosum, anterior forceps"
-579 204 204 204 1 1 1 "external capsule"
-964 204 204 204 1 1 1 "corpus callosum, extreme capsule"
-1108 204 204 204 1 1 1 "genu of corpus callosum"
-971 204 204 204 1 1 1 "corpus callosum, posterior forceps"
-979 204 204 204 1 1 1 "corpus callosum, rostrum"
-484682516 204 204 204 1 1 1 "corpus callosum, body"
-986 204 204 204 1 1 1 "corpus callosum, splenium"
-784 204 204 204 1 1 1 "corticospinal tract"
-6 204 204 204 1 1 1 "internal capsule"
-924 204 204 204 1 1 1 "cerebal peduncle"
-1036 204 204 204 1 1 1 "corticotectal tract"
-1012 204 204 204 1 1 1 "corticorubral tract"
-1003 204 204 204 1 1 1 "corticopontine tract"
-994 204 204 204 1 1 1 "corticobulbar tract"
-190 204 204 204 1 1 1 "pyramid"
-198 204 204 204 1 1 1 "pyramidal decussation"
-1019 204 204 204 1 1 1 "corticospinal tract, crossed"
-1028 204 204 204 1 1 1 "corticospinal tract, uncrossed"
-896 204 204 204 1 1 1 "thalamus related"
-1092 204 204 204 1 1 1 "external medullary lamina of the thalamus"
-14 204 204 204 1 1 1 "internal medullary lamina of the thalamus"
-86 204 204 204 1 1 1 "middle thalamic commissure"
-365 204 204 204 1 1 1 "thalamic peduncles"
-484682520 204 204 204 1 1 1 "optic radiation"
-484682524 204 204 204 1 1 1 "auditory radiation"
-1000 204 204 204 1 1 1 "extrapyramidal fiber systems"
-760 204 204 204 1 1 1 "cerebral nuclei related"
-142 204 204 204 1 1 1 "pallidothalamic pathway"
-102 204 204 204 1 1 1 "nigrostriatal tract"
-109 204 204 204 1 1 1 "nigrothalamic fibers"
-134 204 204 204 1 1 1 "pallidotegmental fascicle"
-309 204 204 204 1 1 1 "striatonigral pathway"
-317 204 204 204 1 1 1 "subthalamic fascicle"
-877 204 204 204 1 1 1 "tectospinal pathway"
-1051 204 204 204 1 1 1 "direct tectospinal pathway"
-1060 204 204 204 1 1 1 "doral tegmental decussation"
-1043 204 204 204 1 1 1 "crossed tectospinal pathway"
-863 204 204 204 1 1 1 "rubrospinal tract"
-397 204 204 204 1 1 1 "ventral tegmental decussation"
-221 204 204 204 1 1 1 "rubroreticular tract"
-736 204 204 204 1 1 1 "central tegmental bundle"
-855 204 204 204 1 1 1 "retriculospinal tract"
-205 204 204 204 1 1 1 "retriculospinal tract, lateral part"
-213 204 204 204 1 1 1 "retriculospinal tract, medial part"
-941 204 204 204 1 1 1 "vestibulospinal pathway"
-991 204 204 204 1 1 1 "medial forebrain bundle system"
-768 204 204 204 1 1 1 "cerebrum related"
-884 204 204 204 1 1 1 "amygdalar capsule"
-892 204 204 204 1 1 1 "ansa peduncularis"
-908 204 204 204 1 1 1 "anterior commissure, temporal limb"
-940 204 204 204 1 1 1 "cingulum bundle"
-1099 204 204 204 1 1 1 "fornix system"
-466 204 204 204 1 1 1 "alveus"
-530 204 204 204 1 1 1 "dorsal fornix"
-603 204 204 204 1 1 1 "fimbria"
-745 204 204 204 1 1 1 "precommissural fornix, general"
-420 204 204 204 1 1 1 "precommissural fornix diagonal band"
-737 204 204 204 1 1 1 "postcommissural fornix"
-428 204 204 204 1 1 1 "medial corticohypothalamic tract"
-436 204 204 204 1 1 1 "columns of the fornix"
-618 204 204 204 1 1 1 "hippocampal commissures"
-443 204 204 204 1 1 1 "dorsal hippocampal commissure"
-449 204 204 204 1 1 1 "ventral hippocampal commissure"
-713 204 204 204 1 1 1 "perforant path"
-474 204 204 204 1 1 1 "angular path"
-37 204 204 204 1 1 1 "longitudinal association bundle"
-301 204 204 204 1 1 1 "stria terminalis"
-484682528 204 204 204 1 1 1 "commissural branch of stria terminalis"
-824 204 204 204 1 1 1 "hypothalamus related"
-54 204 204 204 1 1 1 "medial forebrain bundle"
-405 204 204 204 1 1 1 "ventrolateral hypothalamic tract"
-174 204 204 204 1 1 1 "preoptic commissure"
-349 204 204 204 1 1 1 "supraoptic commissures"
-817 204 204 204 1 1 1 "supraoptic commissures, anterior"
-825 204 204 204 1 1 1 "supraoptic commissures, dorsal"
-833 204 204 204 1 1 1 "supraoptic commissures, ventral"
-166 204 204 204 1 1 1 "premammillary commissure"
-341 204 204 204 1 1 1 "supramammillary decussation"
-182 204 204 204 1 1 1 "propriohypothalamic pathways"
-762 204 204 204 1 1 1 "propriohypothalamic pathways, dorsal"
-770 204 204 204 1 1 1 "propriohypothalamic pathways, lateral"
-779 204 204 204 1 1 1 "propriohypothalamic pathways, medial"
-787 204 204 204 1 1 1 "propriohypothalamic pathways, ventral"
-150 204 204 204 1 1 1 "periventricular bundle of the hypothalamus"
-46 204 204 204 1 1 1 "mammillary related"
-753 204 204 204 1 1 1 "principal mammillary tract"
-690 204 204 204 1 1 1 "mammillothalamic tract"
-681 204 204 204 1 1 1 "mammillotegmental tract"
-673 204 204 204 1 1 1 "mammillary peduncle"
-1068 204 204 204 1 1 1 "dorsal thalamus related"
-722 204 204 204 1 1 1 "periventricular bundle of the thalamus"
-1083 204 204 204 1 1 1 "epithalamus related"
-802 204 204 204 1 1 1 "stria medullaris"
-595 204 204 204 1 1 1 "fasciculus retroflexus"
-611 204 204 204 1 1 1 "habenular commissure"
-730 204 204 204 1 1 1 "pineal stalk"
-70 204 204 204 1 1 1 "midbrain related"
-547 204 204 204 1 1 1 "dorsal longitudinal fascicle"
-563 204 204 204 1 1 1 "dorsal tegmental tract"
-73 170 170 170 1 1 1 "ventricular systems"
-81 170 170 170 1 1 1 "lateral ventricle"
-89 170 170 170 1 1 1 "rhinocele"
-98 170 170 170 1 1 1 "subependymal zone"
-108 170 170 170 1 1 1 "choroid plexus"
-116 170 170 170 1 1 1 "choroid fissure"
-124 170 170 170 1 1 1 "interventricular foramen"
-129 170 170 170 1 1 1 "third ventricle"
-140 170 170 170 1 1 1 "cerebral aqueduct"
-145 170 170 170 1 1 1 "fourth ventricle"
-153 170 170 170 1 1 1 "lateral recess"
-164 170 170 170 1 1 1 "central canal, spinal cord/medulla"
-1024 170 170 170 1 1 1 "grooves"
-1032 170 170 170 1 1 1 "grooves of the cerebral cortex"
-1055 170 170 170 1 1 1 "endorhinal groove"
-1063 170 170 170 1 1 1 "hippocampal fissure"
-1071 170 170 170 1 1 1 "rhinal fissure"
-1078 170 170 170 1 1 1 "rhinal incisure"
-1040 170 170 170 1 1 1 "grooves of the cerebellar cortex"
-1087 170 170 170 1 1 1 "precentral fissure"
-1095 170 170 170 1 1 1 "preculminate fissure"
-1103 170 170 170 1 1 1 "primary fissure"
-1112 170 170 170 1 1 1 "posterior superior fissure"
-1119 170 170 170 1 1 1 "prepyramidal fissure"
-3 170 170 170 1 1 1 "secondary fissure"
-11 170 170 170 1 1 1 "posterolateral fissure"
-18 170 170 170 1 1 1 "nodular fissure"
-25 170 170 170 1 1 1 "simple fissure"
-34 170 170 170 1 1 1 "intercrural fissure"
-43 170 170 170 1 1 1 "ansoparamedian fissure"
-49 170 170 170 1 1 1 "intraparafloccular fissure"
-57 170 170 170 1 1 1 "paramedian sulcus"
-65 170 170 170 1 1 1 "parafloccular sulcus"
-624 170 170 170 1 1 1 "Interpeduncular fossa"
-304325711 127 46 126 1 1 1 "retina"
diff --git a/annotation_volumes/WHS_Atlas_Rat_Brain_v2.label b/annotation_volumes/WHS_Atlas_Rat_Brain_v2.label
deleted file mode 100644
index effc072f8a226443eb2461ea5ff53f8d9ad8efdf..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_Atlas_Rat_Brain_v2.label
+++ /dev/null
@@ -1,95 +0,0 @@
-################################################
-# ITK-SnAP Label Description File
-# File format:
-# IDX -R- -G- -B- -A-- VIS MSH LABEL
-# Fields:
-# IDX: Zero-based index
-# -R-: Red color component (0..255)
-# -G-: Green color component (0..255)
-# -B-: Blue color component (0..255)
-# -A-: Label transparency (0.00 .. 1.00)
-# VIS: Label visibility (0 or 1)
-# IDX: Label mesh visibility (0 or 1)
-# LABEL: Label description
-################################################
- 0 0 0 0 0 0 0 "Clear Label"
- 1 255 52 39 1 1 0 "descending corticofugal pathways"
- 2 255 186 0 1 1 0 "substantia nigra"
- 3 0 0 255 1 1 0 "subthalamic nucleus"
- 4 255 255 0 1 1 0 "molecular layer of the cerebellum"
- 5 0 255 255 1 1 0 "granule cell level of the cerebellum"
- 6 255 0 255 1 1 0 "alveus of the hippocampus"
- 7 52 255 13 1 1 0 "inferior cerebellar peduncle"
- 10 29 104 235 1 1 0 "cingulate cortex, area 2"
- 30 129 79 255 1 1 0 "striatum"
- 31 255 145 186 1 1 0 "globus pallidus"
- 32 26 231 255 1 1 0 "entopeduncular nucleus"
- 33 2 44 255 1 1 0 "ventricular system"
- 34 212 255 0 1 1 0 "medial lemniscus"
- 35 0 176 63 1 1 0 "facial nerve"
- 36 124 252 0 1 1 0 "anterior commissure, anterior part"
- 37 255 186 0 1 1 0 "anterior commissure, posterior part"
- 38 174 0 232 1 1 0 "ventral hippocampal commissure"
- 39 0 100 0 1 1 0 "thalamus"
- 40 255 8 0 1 1 0 "septal region"
- 41 48 218 0 1 1 0 "optic nerve"
- 42 38 126 255 1 1 0 "optic tract and optic chiasm"
- 43 218 170 62 1 1 0 "pineal gland"
- 44 0 165 21 1 1 0 "inner ear"
- 45 134 255 90 0.68 1 0 "spinal cord"
- 46 33 230 255 1 1 0 "commissure of the superior colliculus"
- 47 153 83 255 1 1 0 "brainstem"
- 48 226 120 161 1 1 0 "hypothalamic region"
- 49 238 47 44 1 1 0 "inferior colliculus"
- 50 86 0 221 1 1 0 "superficial gray layer of the superior colliculus"
- 51 7 255 89 1 1 0 "periaqueductal gray"
- 52 21 192 255 1 1 0 "fornix"
- 53 238 186 0 1 1 0 "mammillothalamic tract"
- 54 173 255 47 1 1 0 "commissural stria terminalis"
- 55 225 151 15 1 1 0 "deeper layers of the superior colliculus"
- 56 235 87 255 1 1 0 "periventricular gray"
- 57 250 244 247 1 1 0 "genu of the facial nerve"
- 58 0 215 11 1 1 0 "pontine nuclei"
- 59 0 255 29 1 1 0 "fimbria of the hippocampus"
- 60 244 67 69 1 1 0 "fasciculus retroflexus"
- 61 255 252 0 1 1 0 "stria medullaris of the thalamus"
- 62 238 117 51 1 1 0 "stria terminalis"
- 63 255 0 218 1 1 0 "posterior commissure"
- 64 15 109 230 1 1 0 "glomerular layer of the accessory olfactory bulb"
- 65 255 227 0 1 1 0 "glomerular layer of the olfactory bulb"
- 66 255 135 0 1 1 0 "olfactory bulb"
- 67 255 110 0 1 1 0 "corpus callosum and associated subcortical white matter"
- 68 188 32 173 1 1 0 "brachium of the superior colliculus"
- 69 147 255 39 1 1 0 "commissure of the inferior colliculus"
- 70 39 244 253 1 1 0 "central canal"
- 71 63 192 255 1 1 0 "interpeduncular nucleus"
- 72 179 28 53 1 1 0 "ascending fibers of the facial nerve"
- 73 255 79 206 1 1 0 "anterior commissure"
- 74 0 246 14 1 1 0 "inferior olive"
- 75 91 241 255 1 1 0 "spinal trigeminal nuclus"
- 76 250 128 114 1 1 0 "spinal trigeminal tract"
- 77 206 211 7 1 1 0 "frontal associiation cortex"
- 78 134 204 76 1 1 0 "middle cerebellar peduncle"
- 79 128 170 255 1 1 0 "transverse fibers of the pons"
- 80 69 235 202 1 1 0 "habenular commissure"
- 81 222 7 237 1 1 0 "nucleus of the stria medullaris"
- 82 225 240 13 1 1 0 "basal forebrain region"
- 83 250 170 64 1 1 0 "supraoptic decussation"
- 84 65 150 255 1 1 0 "medial lemniscus decussation"
- 85 114 9 212 1 1 0 "pyramidal decussation"
- 92 3 193 45 1 1 0 "neocortex"
- 93 0 8 182 1 1 0 "bed nucleus of the stria terminalis"
- 94 255 87 30 1 1 0 "pretectal region"
- 95 165 131 107 1 1 1 "cornu ammonis 3"
- 96 91 45 10 1 1 1 "dentate gyrus"
- 97 255 255 0 1 1 1 "cornu ammonis 2"
- 98 217 104 13 1 1 1 "cornu ammonis 1"
- 99 255 82 82 1 1 1 "fasciola cinereum"
- 100 255 192 0 1 1 1 "subiculum"
- 108 40 112 130 1 1 1 "postrhinal cortex"
- 109 80 123 175 1 1 1 "presubiculum"
- 110 23 54 96 1 1 1 "parasubiculum"
- 112 205 51 255 1 1 1 "perirhinal area 35"
- 113 112 48 160 1 1 1 "perirhinal area 36"
- 114 12 92 8 1 1 1 "entorhinal cortex"
- 115 221 166 36 1 1 1 "lateral entorhinal cortex"
diff --git a/annotation_volumes/WHS_Atlas_Rat_Brain_v3.label b/annotation_volumes/WHS_Atlas_Rat_Brain_v3.label
deleted file mode 100644
index 61aef2497c8b9e6c5fd47fca6c679bc25fc6e176..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_Atlas_Rat_Brain_v3.label
+++ /dev/null
@@ -1,134 +0,0 @@
-################################################
-# ITK-SnAP Label Description File
-# File format:
-# IDX -R- -G- -B- -A-- VIS MSH LABEL
-# Fields:
-# IDX: Zero-based index
-# -R-: Red color component (0..255)
-# -G-: Green color component (0..255)
-# -B-: Blue color component (0..255)
-# -A-: Label transparency (0.00 .. 1.00)
-# VIS: Label visibility (0 or 1)
-# IDX: Label mesh visibility (0 or 1)
-# LABEL: Label description
-################################################
- 0 0 0 0 0 0 0 "Clear Label"
- 1 255 52 39 1 1 0 "descending corticofugal pathways"
- 2 255 186 0 1 1 0 "substantia nigra"
- 3 0 0 255 1 1 0 "subthalamic nucleus"
- 4 255 255 0 1 1 0 "molecular layer of the cerebellum"
- 5 0 255 255 1 1 0 "granule cell level of the cerebellum"
- 6 255 0 255 1 1 0 "alveus of the hippocampus"
- 7 52 255 13 1 1 0 "inferior cerebellar peduncle"
- 10 29 104 235 1 1 0 "cingulate cortex, area 2"
- 30 129 79 255 1 1 0 "striatum"
- 31 255 145 186 1 1 0 "globus pallidus"
- 32 26 231 255 1 1 0 "entopeduncular nucleus"
- 33 2 44 255 1 1 0 "ventricular system"
- 34 212 255 0 1 1 0 "medial lemniscus"
- 35 255 25 240 1 1 0 "facial nerve"
- 36 124 252 0 1 1 0 "anterior commissure, anterior part"
- 37 255 186 0 1 1 0 "anterior commissure, posterior part"
- 38 174 0 232 1 1 0 "ventral hippocampal commissure"
- 39 0 100 0 1 1 0 "thalamus"
- 40 255 8 0 1 1 0 "septal region"
- 41 48 218 0 1 1 0 "optic nerve"
- 42 38 126 255 1 1 0 "optic tract and optic chiasm"
- 43 218 170 62 1 1 0 "pineal gland"
- 44 255 255 255 1 1 0 "inner ear, erroneous"
- 45 134 255 90 1 1 0 "spinal cord"
- 46 33 230 255 1 1 0 "commissure of the superior colliculus"
- 47 153 83 255 1 1 0 "brainstem"
- 48 226 120 161 1 1 0 "hypothalamic region"
- 50 86 0 221 1 1 0 "superficial gray layer of the superior colliculus"
- 51 7 255 89 1 1 0 "periaqueductal gray"
- 52 21 192 255 1 1 0 "fornix"
- 53 238 186 0 1 1 0 "mammillothalamic tract"
- 54 173 255 47 1 1 0 "commissural stria terminalis"
- 55 225 151 15 1 1 0 "deeper layers of the superior colliculus"
- 56 235 87 255 1 1 0 "periventricular gray"
- 57 250 244 247 1 1 0 "genu of the facial nerve"
- 58 0 215 11 1 1 0 "pontine nuclei"
- 59 0 255 29 1 1 0 "fimbria of the hippocampus"
- 60 244 67 69 1 1 0 "fasciculus retroflexus"
- 61 0 255 0 1 1 0 "stria medullaris of the thalamus"
- 62 238 117 51 1 1 0 "stria terminalis"
- 63 255 0 218 1 1 0 "posterior commissure"
- 64 15 109 230 1 1 0 "glomerular layer of the accessory olfactory bulb"
- 65 255 227 0 1 1 0 "glomerular layer of the olfactory bulb"
- 66 255 135 0 1 1 0 "olfactory bulb"
- 67 255 110 0 1 1 0 "corpus callosum and associated subcortical white matter"
- 68 188 32 173 1 1 0 "brachium of the superior colliculus"
- 69 255 42 39 1 1 1 "inferior colliculus, commissure"
- 70 39 244 253 1 1 0 "central canal"
- 71 63 192 255 1 1 0 "interpeduncular nucleus"
- 72 179 28 53 1 1 0 "ascending fibers of the facial nerve"
- 73 255 79 206 1 1 0 "anterior commissure"
- 74 0 246 14 1 1 0 "inferior olive"
- 75 91 241 255 1 1 0 "spinal trigeminal nucleus"
- 76 250 128 114 1 1 0 "spinal trigeminal tract"
- 77 206 211 7 1 1 0 "frontal association cortex"
- 78 134 204 76 1 1 0 "middle cerebellar peduncle"
- 79 128 170 255 1 1 0 "transverse fibers of the pons"
- 80 69 235 202 1 1 0 "habenular commissure"
- 81 222 7 237 1 1 0 "nucleus of the stria medullaris"
- 82 225 240 13 1 1 0 "basal forebrain region"
- 83 250 170 64 1 1 0 "supraoptic decussation"
- 84 65 150 255 1 1 0 "medial lemniscus decussation"
- 85 114 9 212 1 1 0 "pyramidal decussation"
- 92 3 193 45 1 1 0 "neocortex"
- 93 0 8 182 1 1 0 "bed nucleus of the stria terminalis"
- 94 255 87 30 1 1 0 "pretectal region"
- 95 165 131 107 1 1 0 "cornu ammonis 3"
- 96 91 45 10 1 1 0 "dentate gyrus"
- 97 255 255 0 1 1 0 "cornu ammonis 2"
- 98 217 104 13 1 1 0 "cornu ammonis 1"
- 99 255 0 0 1 1 0 "fasciola cinereum"
- 100 255 192 0 1 1 0 "subiculum"
- 108 40 112 130 1 1 0 "postrhinal cortex"
- 109 80 123 175 1 1 0 "presubiculum"
- 110 23 54 96 1 1 0 "parasubiculum"
- 112 205 51 255 1 1 0 "perirhinal area 35"
- 113 112 48 160 1 1 0 "perirhinal area 36"
- 114 122 187 51 1 1 0 "entorhinal cortex"
- 115 90 111 47 1 1 0 "lateral entorhinal cortex"
- 119 0 144 55 1 1 1 "vestibular apparatus"
- 120 0 255 29 1 1 1 "cochlea"
- 121 253 148 0 1 1 1 "cochlear nerve"
- 122 253 50 0 1 1 1 "vestibular nerve"
- 123 0 12 255 1 1 1 "ventral cochlear nucleus, granule cell layer"
- 125 52 29 144 1 1 0 "4th ventricle"
- 126 92 156 211 1 1 1 "dorsal cochlear nucleus, molecular layer"
- 127 0 80 156 1 1 1 "dorsal cochlear nucleus, fusiform and granule layer"
- 128 197 238 255 1 1 1 "dorsal cochlear nucleus, deep core"
- 129 255 217 0 1 1 1 "acoustic striae"
- 130 213 255 0 1 1 1 "trapezoid body"
- 131 0 255 81 1 1 1 "nucleus of the trapezoid body"
- 132 0 238 255 1 1 1 "superior paraolivary nucleus"
- 133 219 239 61 1 1 1 "medial superior olive"
- 134 35 76 190 1 1 1 "lateral superior olive"
- 135 1 153 21 1 1 1 "superior periolivary region"
- 136 0 174 255 1 1 1 "ventral periolivary nuclei"
- 137 255 0 115 1 1 1 "lateral lemniscus, ventral nucleus"
- 138 171 16 91 1 1 1 "lateral lemniscus, intermediate nucleus"
- 139 108 18 91 1 1 1 "lateral lemniscus, dorsal nucleus"
- 140 255 29 0 1 1 1 "lateral lemniscus, commissure"
- 141 255 166 0 1 1 1 "lateral lemniscus"
- 142 206 255 142 1 1 1 "inferior colliculus, dorsal cortex"
- 143 0 238 255 1 1 1 "inferior colliculus, central nucleus"
- 145 48 136 203 1 1 1 "inferior colliculus, external cortex"
- 146 176 58 72 1 1 1 "inferior colliculus, brachium"
- 147 10 244 217 1 1 1 "medial geniculate body, medial division"
- 148 239 163 0 1 1 1 "medial geniculate body, dorsal division"
- 149 131 58 31 1 1 1 "medial geniculate body, ventral division"
- 150 255 47 242 1 1 1 "medial geniculate body, marginal zone"
- 151 255 215 0 1 1 1 "primary auditory cortex"
- 152 240 255 255 1 1 1 "secondary auditory cortex, dorsal area"
- 153 216 191 216 1 1 1 "secondary auditory cortex, ventral area"
- 157 244 156 255 1 1 1 "auditory radiation"
- 158 34 152 255 1 1 1 "ventral cochlear nucleus, anterior part"
- 159 0 230 207 1 1 1 "ventral cochlear nucleus, posterior part"
- 160 0 255 106 1 1 1 "ventral cochlear nucleus, cap area"
- 162 185 255 233 1 1 1 "spiral ganglion"
- 163 99 205 0 1 1 1 "nucleus sagulum"
- 164 110 0 255 1 1 1 "reticular thalamic nucleus, auditory segment"
\ No newline at end of file
diff --git a/annotation_volumes/WHS_SD_rat_atlas_v4.label b/annotation_volumes/WHS_SD_rat_atlas_v4.label
deleted file mode 100644
index 0aee42b2fc47d7759e73e23e574015048ed65d49..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_SD_rat_atlas_v4.label
+++ /dev/null
@@ -1,237 +0,0 @@
-################################################
-# ITK-SnAP Label Description File
-# File format:
-# IDX -R- -G- -B- -A-- VIS MSH LABEL
-# Fields:
-# IDX: Zero-based index
-# -R-: Red color component (0..255)
-# -G-: Green color component (0..255)
-# -B-: Blue color component (0..255)
-# -A-: Label transparency (0.00 .. 1.00)
-# VIS: Label visibility (0 or 1)
-# IDX: Label mesh visibility (0 or 1)
-# LABEL: Label description
-################################################
- 0 0 0 0 0 0 0 "Clear Label"
- 1 255 52 39 1 1 0 "corticofugal tract and corona radiata"
- 3 0 0 255 1 1 0 "Subthalamic nucleus"
- 4 255 255 1 1 1 0 "Molecular cell layer of the cerebellum"
- 5 0 255 255 1 1 0 "Cerebellum, unspecified"
- 6 255 0 255 1 1 0 "alveus of the hippocampus"
- 7 52 255 13 1 1 0 "inferior cerebellar peduncle"
- 10 29 104 235 1 1 0 "Cingulate area 2"
- 32 26 231 255 1 1 0 "Entopeduncular nucleus"
- 33 2 44 255 1 1 0 "Ventricular system, unspecified"
- 34 212 255 0 1 1 0 "medial lemniscus, unspecified"
- 35 255 25 240 1 1 0 "facial nerve, unspecified"
- 36 124 252 0 1 1 0 "anterior commissure, anterior limb"
- 37 255 186 0 1 1 0 "anterior commissure, posterior limb"
- 38 174 0 232 1 1 0 "ventral hippocampal commissure"
- 40 255 8 0 1 1 0 "Septal region"
- 41 48 218 0 1 1 0 "optic nerve"
- 42 38 126 255 1 1 0 "optic tract and optic chiasm"
- 43 218 170 62 1 1 0 "Pineal gland"
- 45 134 255 90 1 1 0 "Spinal cord"
- 46 33 230 255 1 1 0 "commissure of the superior colliculus"
- 47 153 83 255 1 1 0 "Brainstem, unspecified"
- 48 226 120 161 1 1 0 "Hypothalamic region, unspecified"
- 50 86 0 221 1 1 0 "Superficial gray layer of the superior colliculus"
- 51 7 255 89 1 1 0 "Periaqueductal gray"
- 52 21 192 255 1 1 0 "fornix"
- 53 238 186 0 1 1 0 "mammillotegmental tract"
- 54 173 255 47 1 1 0 "commissural stria terminalis"
- 55 225 151 15 1 1 0 "Deeper layers of the superior colliculus"
- 56 235 87 255 1 1 0 "Periventricular gray"
- 57 250 244 247 1 1 0 "genu of the facial nerve"
- 58 0 215 11 1 1 0 "Pontine nuclei"
- 59 0 255 29 1 1 0 "fimbria of the hippocampus"
- 60 244 67 69 1 1 0 "fasciculus retroflexus"
- 61 0 255 0 1 1 0 "stria medullaris thalami"
- 62 238 117 51 1 1 0 "stria terminalis"
- 63 255 0 218 1 1 0 "posterior commissure"
- 64 15 109 230 1 1 0 "Glomerular layer of the accessory olfactory bulb"
- 65 255 227 0 1 1 0 "Glomerular layer of the olfactory bulb"
- 66 255 135 0 1 1 0 "Olfactory bulb, unspecified"
- 67 255 110 0 1 1 0 "corpus callosum and associated subcortical white matter"
- 68 188 32 173 1 1 0 "brachium of the superior colliculus"
- 69 255 42 39 1 1 0 "inferior colliculus, commissure"
- 70 39 244 253 1 1 0 "Central canal"
- 71 63 192 255 1 1 0 "Interpeduncular nucleus"
- 72 179 28 53 1 1 0 "ascending fibers of the facial nerve"
- 73 255 79 206 1 1 0 "anterior commissure, intrabulbar part"
- 74 0 246 14 1 1 0 "Inferior olive"
- 75 91 241 255 1 1 0 "Spinal trigeminal nucleus"
- 76 250 128 114 1 1 0 "spinal trigeminal tract"
- 77 206 211 7 1 1 0 "Frontal association cortex"
- 78 134 204 76 1 1 0 "middle cerebellar peduncle"
- 79 128 170 255 1 1 0 "transverse fibers of the pons"
- 80 69 235 202 1 1 0 "habenular commissure"
- 81 222 7 237 1 1 0 "Nucleus of the stria medullaris"
- 82 225 240 13 1 1 0 "Basal forebrain region, unspecified"
- 83 250 170 64 1 1 0 "supraoptic decussation"
- 84 65 150 255 1 1 0 "medial lemniscus decussation"
- 85 114 9 212 1 1 0 "pyramidal decussation"
- 93 0 8 182 1 1 0 "Bed nucleus of the stria terminalis"
- 94 255 87 30 1 1 0 "Pretectal region"
- 95 165 131 107 1 1 0 "Cornu ammonis 3"
- 96 91 45 10 1 1 0 "Dentate gyrus"
- 97 255 255 0 1 1 0 "Cornu ammonis 2"
- 98 217 104 13 1 1 0 "Cornu ammonis 1"
- 99 255 0 0 1 1 0 "Fasciola cinereum"
- 100 255 192 0 1 1 0 "Subiculum"
- 108 40 112 130 1 1 0 "Postrhinal cortex"
- 109 80 123 175 1 1 0 "Presubiculum"
- 110 23 54 96 1 1 0 "Parasubiculum"
- 112 205 51 255 1 1 0 "Perirhinal area 35"
- 113 112 48 160 1 1 0 "Perirhinal area 36"
- 114 122 187 51 1 1 0 "Medial entorhinal cortex"
- 115 90 111 47 1 1 0 "Lateral entorhinal cortex"
- 119 0 144 55 1 1 0 "Vestibular apparatus"
- 120 0 255 28 1 1 0 "Cochlea"
- 121 253 148 0 1 1 0 "Cochlear nerve"
- 122 253 50 0 1 1 0 "Vestibular nerve"
- 123 0 12 255 1 1 0 "Ventral cochlear nucleus, granule cell layer"
- 125 52 29 144 1 1 0 "4th ventricle"
- 126 92 156 211 1 1 0 "Dorsal cochlear nucleus, molecular layer"
- 127 0 80 156 1 1 0 "Dorsal cochlear nucleus, fusiform and granule layer"
- 128 197 238 255 1 1 0 "Dorsal cochlear nucleus, deep core"
- 129 255 217 0 1 1 0 "acoustic striae"
- 130 213 255 0 1 1 0 "trapezoid body"
- 131 0 255 81 1 1 0 "Nucleus of the trapezoid body"
- 132 0 238 255 1 1 0 "Superior paraolivary nucleus"
- 133 219 239 61 1 1 0 "Medial superior olive"
- 134 35 76 190 1 1 0 "Lateral superior olive"
- 135 1 153 21 1 1 0 "Superior periolivary region"
- 136 0 174 255 1 1 0 "Ventral periolivary nuclei"
- 137 255 0 115 1 1 0 "Lateral lemniscus, ventral nucleus"
- 138 171 16 91 1 1 0 "Lateral lemniscus, intermediate nucleus"
- 139 108 18 91 1 1 0 "Lateral lemniscus, dorsal nucleus"
- 140 255 29 0 1 1 0 "lateral lemniscus, commissure"
- 141 255 166 0 1 1 0 "lateral lemniscus, unspecified"
- 142 206 255 142 1 1 0 "Inferior colliculus, dorsal cortex"
- 143 0 238 254 1 1 0 "Inferior colliculus, central nucleus"
- 145 48 136 203 1 1 0 "Inferior colliculus, external cortex"
- 146 176 58 72 1 1 0 "inferior colliculus, brachium"
- 150 255 47 242 1 1 0 "Medial geniculate body, marginal zone"
- 151 255 215 0 1 1 0 "Primary auditory area"
- 152 240 255 255 1 1 0 "Secondary auditory area, dorsal part"
- 153 216 191 216 1 1 0 "Secondary auditory area, ventral part"
- 157 244 156 255 1 1 0 "external medullary lamina, auditory radiation"
- 158 34 152 255 1 1 0 "Ventral cochlear nucleus, anterior part"
- 159 0 230 207 1 1 0 "Ventral cochlear nucleus, posterior part"
- 160 0 255 106 1 1 0 "Ventral cochlear nucleus, cap area"
- 162 185 255 233 1 1 0 "Spiral ganglion"
- 163 99 205 0 1 1 0 "Nucleus sagulum"
- 164 110 0 255 1 1 0 "Reticular (pre)thalamic nucleus, auditory segment"
- 180 255 0 221 1 1 0 "lateral olfactory tract"
- 181 0 204 255 1 1 0 "Piriform cortex, layer 1"
- 182 0 0 254 1 1 0 "Piriform cortex, layer 2"
- 183 165 120 221 1 1 0 "Piriform cortex, layer 3"
- 184 230 216 250 1 1 0 "Nucleus accumbens, core"
- 187 99 197 18 1 1 0 "Substantia nigra, reticular part"
- 188 255 255 127 1 1 0 "Substantia nigra, compact part"
- 189 0 159 159 1 1 0 "Substantia nigra, lateral part"
- 192 88 47 108 1 1 0 "Nucleus accumbens, shell"
- 193 0 162 255 1 1 0 "Ventral pallidum"
- 195 255 85 255 1 1 0 "Globus pallidus external, medial part"
- 196 127 255 212 1 1 0 "Ventral tegmental area"
- 197 129 79 155 1 1 0 "Caudate putamen"
- 198 200 25 200 1 1 0 "Globus pallidus external, lateral part"
- 199 220 20 60 1 1 0 "Ventral striatal region, unspecified"
- 200 0 217 255 1 1 0 "Reticular (pre)thalamic nucleus, unspecified"
- 201 183 199 136 1 1 0 "Peripeduncular nucleus"
- 204 255 25 0 1 1 0 "Pregeniculate nucleus"
- 205 255 226 0 1 1 0 "Dorsal lateral geniculate nucleus"
- 206 217 108 0 1 1 0 "Lateral habenular nucleus"
- 207 205 0 24 1 1 0 "Medial habenular nucleus"
- 208 228 112 214 1 1 0 "Posterior intralaminar nucleus"
- 210 255 255 200 1 1 0 "Posterior thalamic nuclear group, triangular part"
- 211 205 0 6 1 1 0 "Parataenial thalamic nucleus"
- 213 131 10 121 1 1 0 "Anterodorsal thalamic nucleus"
- 214 239 121 218 1 1 0 "Anteroventral thalamic nucleus, dorsomedial part"
- 215 101 35 142 1 1 0 "Anteroventral thalamic nucleus, ventrolateral part"
- 216 0 255 17 1 1 0 "Rhomboid thalamic nucleus"
- 218 35 255 236 1 1 0 "Xiphoid thalamic nucleus"
- 219 255 170 0 1 1 0 "Reuniens thalamic nucleus"
- 221 0 185 126 1 1 0 "Ventromedial thalamic nucleus"
- 222 130 0 217 1 1 0 "Submedius thalamic nucleus"
- 223 139 93 139 1 1 0 "Angular thalamic nucleus"
- 227 255 0 254 1 1 0 "Ventral posteromedial thalamic nucleus"
- 228 255 123 0 1 1 0 "Laterodorsal thalamic nucleus, dorsomedial part"
- 229 43 153 31 1 1 0 "Laterodorsal thalamic nucleus, ventrolateral part"
- 230 255 255 2 1 1 0 "Posterior thalamic nucleus"
- 231 170 170 255 1 1 0 "Ventrolateral thalamic nucleus"
- 232 255 85 127 1 1 0 "Mediodorsal thalamic nucleus, lateral part"
- 233 85 170 0 1 1 0 "Mediodorsal thalamic nucleus, central part"
- 235 216 191 217 1 1 0 "Zona incerta, dorsal part"
- 236 75 200 138 1 1 0 "Zona incerta, ventral part"
- 238 194 71 79 1 1 0 "Zona incerta, A13 dopamine cells"
- 239 219 143 247 1 1 0 "pretectothalamic lamina"
- 240 170 255 255 1 1 0 "Mediodorsal thalamic nucleus, medial part"
- 242 156 51 51 1 1 0 "Paraventricular thalamic nuclei (anterior and posterior)"
- 246 240 248 255 1 1 0 "Paracentral thalamic nucleus"
- 247 224 182 64 1 1 0 "Central medial thalamic nucleus"
- 248 153 50 204 1 1 0 "Central lateral thalamic nucleus"
- 249 170 255 0 1 1 0 "external medullary lamina, unspecified"
- 254 0 85 255 1 1 0 "Anteromedial thalamic nucleus"
- 255 248 117 222 1 1 0 "Interanteromedial thalamic nucleus"
- 257 30 144 255 1 1 0 "Zona incerta, rostral part"
- 260 160 82 45 1 1 0 "Intermediodorsal thalamic nucleus"
- 266 0 255 8 1 1 0 "Ventral posterior nucleus of the thalamus, parvicellular part"
- 267 255 239 213 1 1 0 "Parafascicular thalamic nucleus"
- 268 0 0 205 1 1 0 "Retroreuniens thalamic nucleus"
- 270 210 182 140 1 1 0 "superior cerebellar peduncle and prerubral field"
- 272 0 0 128 1 1 0 "Intergeniculate leaflet"
- 278 233 150 122 1 1 0 "Subparafascicular nucleus"
- 280 255 250 250 1 1 0 "Fields of Forel"
- 281 147 112 219 1 1 0 "Subgeniculate nucleus"
- 282 131 50 128 1 1 0 "Ethmoid-Limitans nucleus"
- 283 199 87 61 1 1 0 "Lateral posterior thalamic nucleus, lateral part"
- 284 255 182 193 1 1 0 "Zona incerta, A11 dopamine cells"
- 285 60 179 113 1 1 0 "Lateral posterior thalamic nucleus, mediorostral part"
- 286 255 235 205 1 1 0 "Lateral posterior thalamic nucleus, mediocaudal part"
- 287 255 228 196 1 1 0 "Zona incerta, caudal part"
- 290 155 148 111 1 1 0 "intramedullary thalamic area"
- 291 255 92 10 1 1 0 "internal medullary lamina"
- 293 255 136 0 1 1 0 "Ventral anterior thalamic nucleus"
- 294 171 86 62 1 1 0 "Ventral posterolateral thalamic nucleus"
- 295 239 163 0 1 1 0 "Medial geniculate body, dorsal division"
- 297 10 244 217 1 1 0 "Medial geniculate body, medial division"
- 298 131 58 31 1 1 0 "Medial geniculate body, ventral division"
- 299 10 244 150 1 1 0 "Medial geniculate body, suprageniculate nucleus"
- 400 255 0 1 1 1 0 "Ventrolateral orbital area"
- 401 255 174 201 1 1 0 "Lateral orbital area"
- 402 200 191 231 1 1 0 "Ventral orbital area"
- 403 63 72 204 1 1 0 "Medial orbital area"
- 404 185 122 87 1 1 0 "Dorsolateral orbital area"
- 405 163 73 164 1 1 0 "Prelimbic area"
- 406 0 162 232 1 1 0 "Secondary motor area"
- 407 136 0 21 1 1 0 "Frontal association area 3"
- 408 153 217 234 1 1 0 "Primary motor area"
- 409 255 201 14 1 1 0 "Agranular insular cortex, ventral area"
- 410 255 127 39 1 1 0 "Agranular insular cortex dorsal area "
- 411 0 128 128 1 1 0 "Cingulate area 1"
- 412 153 217 200 1 1 0 "Claustrum"
- 413 34 177 76 1 1 0 "Infralimbic area"
- 414 255 242 0 1 1 0 "Dysgranular insular cortex"
- 416 239 228 176 1 1 0 "Granular insular cortex"
- 417 185 14 131 1 1 0 "Primary somatosensory area, forelimb representation"
- 418 237 28 36 1 1 0 "Primary somatosensory area, dysgranular zone"
- 420 255 128 192 1 1 0 "Primary somatosensory area, face representation"
- 422 200 100 250 1 1 0 "Secondary somatosensory area"
- 423 136 100 21 1 1 0 "Primary somatosensory area, hindlimb representation"
- 424 181 230 29 1 1 0 "Agranular insular cortex, posterior area "
- 425 120 177 76 1 1 0 "Primary somatosensory area, barrel field"
- 427 200 73 164 1 1 0 "Retrosplenial dysgranular area"
- 429 225 150 201 1 1 0 "Primary somatosensory area, trunk representation"
- 430 25 100 200 1 1 0 "Retrosplenial granular area"
- 432 255 240 29 1 1 0 "Parietal association cortex, lateral area"
- 433 108 0 108 1 1 0 "Parietal association cortex, medial area"
- 436 128 0 64 1 1 0 "Parietal association cortex, posterior area "
- 442 84 52 35 1 1 0 "Primary visual area"
- 443 255 100 100 1 1 0 "Secondary visual area, lateral part"
- 444 0 128 0 1 1 0 "Temporal association cortex"
- 448 128 0 100 1 1 0 "Secondary visual area, medial part"
- 500 1 10 100 1 1 0 "Endopiriform nucleus"
- 501 2 20 200 1 1 0 "Amygdaloid area, unspecified"
- 502 230 184 67 1 1 0 "Nucleus of the lateral olfactory tract"
diff --git a/annotation_volumes/WHS_v2_colours.csv b/annotation_volumes/WHS_v2_colours.csv
deleted file mode 100644
index 54b87982797c55e58f2a7a54f16aaead1c6a3dc2..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_v2_colours.csv
+++ /dev/null
@@ -1,82 +0,0 @@
-idx,name,r,g,b,a,VIS,MSH
-0,Clear Label,0,0,0,1.0,1.0,1.0
-1,descending corticofugal pathways,255,52,39,1.0,1.0,0.0
-2,substantia nigra,255,186,0,1.0,1.0,0.0
-3,subthalamic nucleus,0,0,255,1.0,1.0,0.0
-4,molecular layer of the cerebellum,255,255,0,1.0,1.0,0.0
-5,granule cell level of the cerebellum,0,255,255,1.0,1.0,0.0
-6,alveus of the hippocampus,255,0,255,1.0,1.0,0.0
-7,inferior cerebellar peduncle,52,255,13,1.0,1.0,0.0
-10,"cingulate cortex, area 2",29,104,235,1.0,1.0,0.0
-30,striatum,129,79,255,1.0,1.0,0.0
-31,globus pallidus,255,145,186,1.0,1.0,0.0
-32,entopeduncular nucleus,26,231,255,1.0,1.0,0.0
-33,ventricular system,2,44,255,1.0,1.0,0.0
-34,medial lemniscus,212,255,0,1.0,1.0,0.0
-35,facial nerve,0,176,63,1.0,1.0,0.0
-36,"anterior commissure, anterior part",124,252,0,1.0,1.0,0.0
-37,"anterior commissure, posterior part",255,186,0,1.0,1.0,0.0
-38,ventral hippocampal commissure,174,0,232,1.0,1.0,0.0
-39,thalamus,0,100,0,1.0,1.0,0.0
-40,septal region,255,8,0,1.0,1.0,0.0
-41,optic nerve,48,218,0,1.0,1.0,0.0
-42,optic tract and optic chiasm,38,126,255,1.0,1.0,0.0
-43,pineal gland,218,170,62,1.0,1.0,0.0
-44,inner ear,0,165,21,1.0,1.0,0.0
-45,spinal cord,134,255,90,0.68,1.0,0.0
-46,commissure of the superior colliculus,33,230,255,1.0,1.0,0.0
-47,brainstem,153,83,255,1.0,1.0,0.0
-48,hypothalamic region,226,120,161,1.0,1.0,0.0
-49,inferior colliculus,238,47,44,1.0,1.0,0.0
-50,superficial gray layer of the superior colliculus,86,0,221,1.0,1.0,0.0
-51,periaqueductal gray,7,255,89,1.0,1.0,0.0
-52,fornix,21,192,255,1.0,1.0,0.0
-53,mammillothalamic tract,238,186,0,1.0,1.0,0.0
-54,commissural stria terminalis,173,255,47,1.0,1.0,0.0
-55,deeper layers of the superior colliculus,225,151,15,1.0,1.0,0.0
-56,periventricular gray,235,87,255,1.0,1.0,0.0
-57,genu of the facial nerve,250,244,247,1.0,1.0,0.0
-58,pontine nuclei,0,215,11,1.0,1.0,0.0
-59,fimbria of the hippocampus,0,255,29,1.0,1.0,0.0
-60,fasciculus retroflexus,244,67,69,1.0,1.0,0.0
-61,stria medullaris of the thalamus,255,252,0,1.0,1.0,0.0
-62,stria terminalis,238,117,51,1.0,1.0,0.0
-63,posterior commissure,255,0,218,1.0,1.0,0.0
-64,glomerular layer of the accessory olfactory bulb,15,109,230,1.0,1.0,0.0
-65,glomerular layer of the olfactory bulb,255,227,0,1.0,1.0,0.0
-66,olfactory bulb,255,135,0,1.0,1.0,0.0
-67,corpus callosum and associated subcortical white matter,255,110,0,1.0,1.0,0.0
-68,brachium of the superior colliculus,188,32,173,1.0,1.0,0.0
-69,commissure of the inferior colliculus,147,255,39,1.0,1.0,0.0
-70,central canal,39,244,253,1.0,1.0,0.0
-71,interpeduncular nucleus,63,192,255,1.0,1.0,0.0
-72,ascending fibers of the facial nerve,179,28,53,1.0,1.0,0.0
-73,anterior commissure,255,79,206,1.0,1.0,0.0
-74,inferior olive,0,246,14,1.0,1.0,0.0
-75,spinal trigeminal nuclus,91,241,255,1.0,1.0,0.0
-76,spinal trigeminal tract,250,128,114,1.0,1.0,0.0
-77,frontal associiation cortex,206,211,7,1.0,1.0,0.0
-78,middle cerebellar peduncle,134,204,76,1.0,1.0,0.0
-79,transverse fibers of the pons,128,170,255,1.0,1.0,0.0
-80,habenular commissure,69,235,202,1.0,1.0,0.0
-81,nucleus of the stria medullaris,222,7,237,1.0,1.0,0.0
-82,basal forebrain region,225,240,13,1.0,1.0,0.0
-83,supraoptic decussation,250,170,64,1.0,1.0,0.0
-84,medial lemniscus decussation,65,150,255,1.0,1.0,0.0
-85,pyramidal decussation,114,9,212,1.0,1.0,0.0
-92,neocortex,3,193,45,1.0,1.0,0.0
-93,bed nucleus of the stria terminalis,0,8,182,1.0,1.0,0.0
-94,pretectal region,255,87,30,1.0,1.0,0.0
-95,cornu ammonis 3,165,131,107,1.0,1.0,1.0
-96,dentate gyrus,91,45,10,1.0,1.0,1.0
-97,cornu ammonis 2,255,255,0,1.0,1.0,1.0
-98,cornu ammonis 1,217,104,13,1.0,1.0,1.0
-99,fasciola cinereum,255,82,82,1.0,1.0,1.0
-100,subiculum,255,192,0,1.0,1.0,1.0
-108,postrhinal cortex,40,112,130,1.0,1.0,1.0
-109,presubiculum,80,123,175,1.0,1.0,1.0
-110,parasubiculum,23,54,96,1.0,1.0,1.0
-112,perirhinal area 35,205,51,255,1.0,1.0,1.0
-113,perirhinal area 36,112,48,160,1.0,1.0,1.0
-114,entorhinal cortex,12,92,8,1.0,1.0,1.0
-115,lateral entorhinal cortex,221,166,36,1.0,1.0,1.0
diff --git a/annotation_volumes/WHS_v3_colours.csv b/annotation_volumes/WHS_v3_colours.csv
deleted file mode 100644
index 306b7c92915eab7382253caa7d4cb4a2253102af..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_v3_colours.csv
+++ /dev/null
@@ -1,121 +0,0 @@
-idx,name,r,g,b,a,VIS,MSH
-0,Clear Label,0,0,0,1.0,1.0,1.0
-1,descending corticofugal pathways,255,52,39,1.0,1.0,0.0
-2,substantia nigra,255,186,0,1.0,1.0,0.0
-3,subthalamic nucleus,0,0,255,1.0,1.0,0.0
-4,molecular layer of the cerebellum,255,255,0,1.0,1.0,0.0
-5,granule cell level of the cerebellum,0,255,255,1.0,1.0,0.0
-6,alveus of the hippocampus,255,0,255,1.0,1.0,0.0
-7,inferior cerebellar peduncle,52,255,13,1.0,1.0,0.0
-10,"cingulate cortex, area 2",29,104,235,1.0,1.0,0.0
-30,striatum,129,79,255,1.0,1.0,0.0
-31,globus pallidus,255,145,186,1.0,1.0,0.0
-32,entopeduncular nucleus,26,231,255,1.0,1.0,0.0
-33,ventricular system,2,44,255,1.0,1.0,0.0
-34,medial lemniscus,212,255,0,1.0,1.0,0.0
-35,facial nerve,255,25,240,1.0,1.0,0.0
-36,"anterior commissure, anterior part",124,252,0,1.0,1.0,0.0
-37,"anterior commissure, posterior part",255,186,0,1.0,1.0,0.0
-38,ventral hippocampal commissure,174,0,232,1.0,1.0,0.0
-39,thalamus,0,100,0,1.0,1.0,0.0
-40,septal region,255,8,0,1.0,1.0,0.0
-41,optic nerve,48,218,0,1.0,1.0,0.0
-42,optic tract and optic chiasm,38,126,255,1.0,1.0,0.0
-43,pineal gland,218,170,62,1.0,1.0,0.0
-44,"inner ear, erroneous",255,255,255,1.0,1.0,0.0
-45,spinal cord,134,255,90,1.0,1.0,0.0
-46,commissure of the superior colliculus,33,230,255,1.0,1.0,0.0
-47,brainstem,153,83,255,1.0,1.0,0.0
-48,hypothalamic region,226,120,161,1.0,1.0,0.0
-50,superficial gray layer of the superior colliculus,86,0,221,1.0,1.0,0.0
-51,periaqueductal gray,7,255,89,1.0,1.0,0.0
-52,fornix,21,192,255,1.0,1.0,0.0
-53,mammillothalamic tract,238,186,0,1.0,1.0,0.0
-54,commissural stria terminalis,173,255,47,1.0,1.0,0.0
-55,deeper layers of the superior colliculus,225,151,15,1.0,1.0,0.0
-56,periventricular gray,235,87,255,1.0,1.0,0.0
-57,genu of the facial nerve,250,244,247,1.0,1.0,0.0
-58,pontine nuclei,0,215,11,1.0,1.0,0.0
-59,fimbria of the hippocampus,0,255,29,1.0,1.0,0.0
-60,fasciculus retroflexus,244,67,69,1.0,1.0,0.0
-61,stria medullaris of the thalamus,0,255,0,1.0,1.0,0.0
-62,stria terminalis,238,117,51,1.0,1.0,0.0
-63,posterior commissure,255,0,218,1.0,1.0,0.0
-64,glomerular layer of the accessory olfactory bulb,15,109,230,1.0,1.0,0.0
-65,glomerular layer of the olfactory bulb,255,227,0,1.0,1.0,0.0
-66,olfactory bulb,255,135,0,1.0,1.0,0.0
-67,corpus callosum and associated subcortical white matter,255,110,0,1.0,1.0,0.0
-68,brachium of the superior colliculus,188,32,173,1.0,1.0,0.0
-69,"inferior colliculus, commissure",255,42,39,1.0,1.0,1.0
-70,central canal,39,244,253,1.0,1.0,0.0
-71,interpeduncular nucleus,63,192,255,1.0,1.0,0.0
-72,ascending fibers of the facial nerve,179,28,53,1.0,1.0,0.0
-73,anterior commissure,255,79,206,1.0,1.0,0.0
-74,inferior olive,0,246,14,1.0,1.0,0.0
-75,spinal trigeminal nucleus,91,241,255,1.0,1.0,0.0
-76,spinal trigeminal tract,250,128,114,1.0,1.0,0.0
-77,frontal association cortex,206,211,7,1.0,1.0,0.0
-78,middle cerebellar peduncle,134,204,76,1.0,1.0,0.0
-79,transverse fibers of the pons,128,170,255,1.0,1.0,0.0
-80,habenular commissure,69,235,202,1.0,1.0,0.0
-81,nucleus of the stria medullaris,222,7,237,1.0,1.0,0.0
-82,basal forebrain region,225,240,13,1.0,1.0,0.0
-83,supraoptic decussation,250,170,64,1.0,1.0,0.0
-84,medial lemniscus decussation,65,150,255,1.0,1.0,0.0
-85,pyramidal decussation,114,9,212,1.0,1.0,0.0
-92,neocortex,3,193,45,1.0,1.0,0.0
-93,bed nucleus of the stria terminalis,0,8,182,1.0,1.0,0.0
-94,pretectal region,255,87,30,1.0,1.0,0.0
-95,cornu ammonis 3,165,131,107,1.0,1.0,0.0
-96,dentate gyrus,91,45,10,1.0,1.0,0.0
-97,cornu ammonis 2,255,255,0,1.0,1.0,0.0
-98,cornu ammonis 1,217,104,13,1.0,1.0,0.0
-99,fasciola cinereum,255,0,0,1.0,1.0,0.0
-100,subiculum,255,192,0,1.0,1.0,0.0
-108,postrhinal cortex,40,112,130,1.0,1.0,0.0
-109,presubiculum,80,123,175,1.0,1.0,0.0
-110,parasubiculum,23,54,96,1.0,1.0,0.0
-112,perirhinal area 35,205,51,255,1.0,1.0,0.0
-113,perirhinal area 36,112,48,160,1.0,1.0,0.0
-114,entorhinal cortex,122,187,51,1.0,1.0,0.0
-115,lateral entorhinal cortex,90,111,47,1.0,1.0,0.0
-119,vestibular apparatus,0,144,55,1.0,1.0,1.0
-120,cochlea,0,255,29,1.0,1.0,1.0
-121,cochlear nerve,253,148,0,1.0,1.0,1.0
-122,vestibular nerve,253,50,0,1.0,1.0,1.0
-123,"ventral cochlear nucleus, granule cell layer",0,12,255,1.0,1.0,1.0
-125,4th ventricle,52,29,144,1.0,1.0,0.0
-126,"dorsal cochlear nucleus, molecular layer",92,156,211,1.0,1.0,1.0
-127,"dorsal cochlear nucleus, fusiform and granule layer",0,80,156,1.0,1.0,1.0
-128,"dorsal cochlear nucleus, deep core",197,238,255,1.0,1.0,1.0
-129,acoustic striae,255,217,0,1.0,1.0,1.0
-130,trapezoid body,213,255,0,1.0,1.0,1.0
-131,nucleus of the trapezoid body,0,255,81,1.0,1.0,1.0
-132,superior paraolivary nucleus,0,238,255,1.0,1.0,1.0
-133,medial superior olive,219,239,61,1.0,1.0,1.0
-134,lateral superior olive,35,76,190,1.0,1.0,1.0
-135,superior periolivary region,1,153,21,1.0,1.0,1.0
-136,ventral periolivary nuclei,0,174,255,1.0,1.0,1.0
-137,"lateral lemniscus, ventral nucleus",255,0,115,1.0,1.0,1.0
-138,"lateral lemniscus, intermediate nucleus",171,16,91,1.0,1.0,1.0
-139,"lateral lemniscus, dorsal nucleus",108,18,91,1.0,1.0,1.0
-140,"lateral lemniscus, commissure",255,29,0,1.0,1.0,1.0
-141,lateral lemniscus,255,166,0,1.0,1.0,1.0
-142,"inferior colliculus, dorsal cortex",206,255,142,1.0,1.0,1.0
-143,"inferior colliculus, central nucleus",0,238,255,1.0,1.0,1.0
-145,"inferior colliculus, external cortex",48,136,203,1.0,1.0,1.0
-146,"inferior colliculus, brachium",176,58,72,1.0,1.0,1.0
-147,"medial geniculate body, medial division",10,244,217,1.0,1.0,1.0
-148,"medial geniculate body, dorsal division",239,163,0,1.0,1.0,1.0
-149,"medial geniculate body, ventral division",131,58,31,1.0,1.0,1.0
-150,"medial geniculate body, marginal zone",255,47,242,1.0,1.0,1.0
-151,primary auditory cortex,255,215,0,1.0,1.0,1.0
-152,"secondary auditory cortex, dorsal area",240,255,255,1.0,1.0,1.0
-153,"secondary auditory cortex, ventral area",216,191,216,1.0,1.0,1.0
-157,auditory radiation,244,156,255,1.0,1.0,1.0
-158,"ventral cochlear nucleus, anterior part",34,152,255,1.0,1.0,1.0
-159,"ventral cochlear nucleus, posterior part",0,230,207,1.0,1.0,1.0
-160,"ventral cochlear nucleus, cap area",0,255,106,1.0,1.0,1.0
-162,spiral ganglion,185,255,233,1.0,1.0,1.0
-163,nucleus sagulum,99,205,0,1.0,1.0,1.0
-164,"reticular thalamic nucleus, auditory segment",110,0,255,1.0,1.0,1.0
diff --git a/annotation_volumes/WHS_v4_colours.csv b/annotation_volumes/WHS_v4_colours.csv
deleted file mode 100644
index 6db3be4f76b124a9a1a7af37dcd702fb90b45243..0000000000000000000000000000000000000000
--- a/annotation_volumes/WHS_v4_colours.csv
+++ /dev/null
@@ -1,224 +0,0 @@
-idx,name,r,g,b,a,VIS,MSH
-0,Clear Label,0,0,0,1.0,1.0,1.0
-1,corticofugal tract and corona radiata,255,52,39,1.0,1.0,0.0
-3,Subthalamic nucleus,0,0,255,1.0,1.0,0.0
-4,Molecular cell layer of the cerebellum,255,255,1,1.0,1.0,0.0
-5,"Cerebellum, unspecified",0,255,255,1.0,1.0,0.0
-6,alveus of the hippocampus,255,0,255,1.0,1.0,0.0
-7,inferior cerebellar peduncle,52,255,13,1.0,1.0,0.0
-10,Cingulate area 2,29,104,235,1.0,1.0,0.0
-32,Entopeduncular nucleus,26,231,255,1.0,1.0,0.0
-33,"Ventricular system, unspecified",2,44,255,1.0,1.0,0.0
-34,"medial lemniscus, unspecified",212,255,0,1.0,1.0,0.0
-35,"facial nerve, unspecified",255,25,240,1.0,1.0,0.0
-36,"anterior commissure, anterior limb",124,252,0,1.0,1.0,0.0
-37,"anterior commissure, posterior limb",255,186,0,1.0,1.0,0.0
-38,ventral hippocampal commissure,174,0,232,1.0,1.0,0.0
-40,Septal region,255,8,0,1.0,1.0,0.0
-41,optic nerve,48,218,0,1.0,1.0,0.0
-42,optic tract and optic chiasm,38,126,255,1.0,1.0,0.0
-43,Pineal gland,218,170,62,1.0,1.0,0.0
-45,Spinal cord,134,255,90,1.0,1.0,0.0
-46,commissure of the superior colliculus,33,230,255,1.0,1.0,0.0
-47,"Brainstem, unspecified",153,83,255,1.0,1.0,0.0
-48,"Hypothalamic region, unspecified",226,120,161,1.0,1.0,0.0
-50,Superficial gray layer of the superior colliculus,86,0,221,1.0,1.0,0.0
-51,Periaqueductal gray,7,255,89,1.0,1.0,0.0
-52,fornix,21,192,255,1.0,1.0,0.0
-53,mammillotegmental tract,238,186,0,1.0,1.0,0.0
-54,commissural stria terminalis,173,255,47,1.0,1.0,0.0
-55,Deeper layers of the superior colliculus,225,151,15,1.0,1.0,0.0
-56,Periventricular gray,235,87,255,1.0,1.0,0.0
-57,genu of the facial nerve,250,244,247,1.0,1.0,0.0
-58,Pontine nuclei,0,215,11,1.0,1.0,0.0
-59,fimbria of the hippocampus,0,255,29,1.0,1.0,0.0
-60,fasciculus retroflexus,244,67,69,1.0,1.0,0.0
-61,stria medullaris thalami,0,255,0,1.0,1.0,0.0
-62,stria terminalis,238,117,51,1.0,1.0,0.0
-63,posterior commissure,255,0,218,1.0,1.0,0.0
-64,Glomerular layer of the accessory olfactory bulb,15,109,230,1.0,1.0,0.0
-65,Glomerular layer of the olfactory bulb,255,227,0,1.0,1.0,0.0
-66,"Olfactory bulb, unspecified",255,135,0,1.0,1.0,0.0
-67,corpus callosum and associated subcortical white matter,255,110,0,1.0,1.0,0.0
-68,brachium of the superior colliculus,188,32,173,1.0,1.0,0.0
-69,"inferior colliculus, commissure",255,42,39,1.0,1.0,0.0
-70,Central canal,39,244,253,1.0,1.0,0.0
-71,Interpeduncular nucleus,63,192,255,1.0,1.0,0.0
-72,ascending fibers of the facial nerve,179,28,53,1.0,1.0,0.0
-73,"anterior commissure, intrabulbar part",255,79,206,1.0,1.0,0.0
-74,Inferior olive,0,246,14,1.0,1.0,0.0
-75,Spinal trigeminal nucleus,91,241,255,1.0,1.0,0.0
-76,spinal trigeminal tract,250,128,114,1.0,1.0,0.0
-77,Frontal association cortex,206,211,7,1.0,1.0,0.0
-78,middle cerebellar peduncle,134,204,76,1.0,1.0,0.0
-79,transverse fibers of the pons,128,170,255,1.0,1.0,0.0
-80,habenular commissure,69,235,202,1.0,1.0,0.0
-81,Nucleus of the stria medullaris,222,7,237,1.0,1.0,0.0
-82,"Basal forebrain region, unspecified",225,240,13,1.0,1.0,0.0
-83,supraoptic decussation,250,170,64,1.0,1.0,0.0
-84,medial lemniscus decussation,65,150,255,1.0,1.0,0.0
-85,pyramidal decussation,114,9,212,1.0,1.0,0.0
-93,Bed nucleus of the stria terminalis,0,8,182,1.0,1.0,0.0
-94,Pretectal region,255,87,30,1.0,1.0,0.0
-95,Cornu ammonis 3,165,131,107,1.0,1.0,0.0
-96,Dentate gyrus,91,45,10,1.0,1.0,0.0
-97,Cornu ammonis 2,255,255,0,1.0,1.0,0.0
-98,Cornu ammonis 1,217,104,13,1.0,1.0,0.0
-99,Fasciola cinereum,255,0,0,1.0,1.0,0.0
-100,Subiculum,255,192,0,1.0,1.0,0.0
-108,Postrhinal cortex,40,112,130,1.0,1.0,0.0
-109,Presubiculum,80,123,175,1.0,1.0,0.0
-110,Parasubiculum,23,54,96,1.0,1.0,0.0
-112,Perirhinal area 35,205,51,255,1.0,1.0,0.0
-113,Perirhinal area 36,112,48,160,1.0,1.0,0.0
-114,Medial entorhinal cortex,122,187,51,1.0,1.0,0.0
-115,Lateral entorhinal cortex,90,111,47,1.0,1.0,0.0
-119,Vestibular apparatus,0,144,55,1.0,1.0,0.0
-120,Cochlea,0,255,28,1.0,1.0,0.0
-121,Cochlear nerve,253,148,0,1.0,1.0,0.0
-122,Vestibular nerve,253,50,0,1.0,1.0,0.0
-123,"Ventral cochlear nucleus, granule cell layer",0,12,255,1.0,1.0,0.0
-125,4th ventricle,52,29,144,1.0,1.0,0.0
-126,"Dorsal cochlear nucleus, molecular layer",92,156,211,1.0,1.0,0.0
-127,"Dorsal cochlear nucleus, fusiform and granule layer",0,80,156,1.0,1.0,0.0
-128,"Dorsal cochlear nucleus, deep core",197,238,255,1.0,1.0,0.0
-129,acoustic striae,255,217,0,1.0,1.0,0.0
-130,trapezoid body,213,255,0,1.0,1.0,0.0
-131,Nucleus of the trapezoid body,0,255,81,1.0,1.0,0.0
-132,Superior paraolivary nucleus,0,238,255,1.0,1.0,0.0
-133,Medial superior olive,219,239,61,1.0,1.0,0.0
-134,Lateral superior olive,35,76,190,1.0,1.0,0.0
-135,Superior periolivary region,1,153,21,1.0,1.0,0.0
-136,Ventral periolivary nuclei,0,174,255,1.0,1.0,0.0
-137,"Lateral lemniscus, ventral nucleus",255,0,115,1.0,1.0,0.0
-138,"Lateral lemniscus, intermediate nucleus",171,16,91,1.0,1.0,0.0
-139,"Lateral lemniscus, dorsal nucleus",108,18,91,1.0,1.0,0.0
-140,"lateral lemniscus, commissure",255,29,0,1.0,1.0,0.0
-141,"lateral lemniscus, unspecified",255,166,0,1.0,1.0,0.0
-142,"Inferior colliculus, dorsal cortex",206,255,142,1.0,1.0,0.0
-143,"Inferior colliculus, central nucleus",0,238,254,1.0,1.0,0.0
-145,"Inferior colliculus, external cortex",48,136,203,1.0,1.0,0.0
-146,"inferior colliculus, brachium",176,58,72,1.0,1.0,0.0
-150,"Medial geniculate body, marginal zone",255,47,242,1.0,1.0,0.0
-151,Primary auditory area,255,215,0,1.0,1.0,0.0
-152,"Secondary auditory area, dorsal part",240,255,255,1.0,1.0,0.0
-153,"Secondary auditory area, ventral part",216,191,216,1.0,1.0,0.0
-157,"external medullary lamina, auditory radiation",244,156,255,1.0,1.0,0.0
-158,"Ventral cochlear nucleus, anterior part",34,152,255,1.0,1.0,0.0
-159,"Ventral cochlear nucleus, posterior part",0,230,207,1.0,1.0,0.0
-160,"Ventral cochlear nucleus, cap area",0,255,106,1.0,1.0,0.0
-162,Spiral ganglion,185,255,233,1.0,1.0,0.0
-163,Nucleus sagulum,99,205,0,1.0,1.0,0.0
-164,"Reticular (pre)thalamic nucleus, auditory segment",110,0,255,1.0,1.0,0.0
-180,lateral olfactory tract,255,0,221,1.0,1.0,0.0
-181,"Piriform cortex, layer 1",0,204,255,1.0,1.0,0.0
-182,"Piriform cortex, layer 2",0,0,254,1.0,1.0,0.0
-183,"Piriform cortex, layer 3",165,120,221,1.0,1.0,0.0
-184,"Nucleus accumbens, core",230,216,250,1.0,1.0,0.0
-187,"Substantia nigra, reticular part",99,197,18,1.0,1.0,0.0
-188,"Substantia nigra, compact part",255,255,127,1.0,1.0,0.0
-189,"Substantia nigra, lateral part",0,159,159,1.0,1.0,0.0
-192,"Nucleus accumbens, shell",88,47,108,1.0,1.0,0.0
-193,Ventral pallidum,0,162,255,1.0,1.0,0.0
-195,"Globus pallidus external, medial part",255,85,255,1.0,1.0,0.0
-196,Ventral tegmental area,127,255,212,1.0,1.0,0.0
-197,Caudate putamen,129,79,155,1.0,1.0,0.0
-198,"Globus pallidus external, lateral part",200,25,200,1.0,1.0,0.0
-199,"Ventral striatal region, unspecified",220,20,60,1.0,1.0,0.0
-200,"Reticular (pre)thalamic nucleus, unspecified",0,217,255,1.0,1.0,0.0
-201,Peripeduncular nucleus,183,199,136,1.0,1.0,0.0
-204,Pregeniculate nucleus,255,25,0,1.0,1.0,0.0
-205,Dorsal lateral geniculate nucleus,255,226,0,1.0,1.0,0.0
-206,Lateral habenular nucleus,217,108,0,1.0,1.0,0.0
-207,Medial habenular nucleus,205,0,24,1.0,1.0,0.0
-208,Posterior intralaminar nucleus,228,112,214,1.0,1.0,0.0
-210,"Posterior thalamic nuclear group, triangular part",255,255,200,1.0,1.0,0.0
-211,Parataenial thalamic nucleus,205,0,6,1.0,1.0,0.0
-213,Anterodorsal thalamic nucleus,131,10,121,1.0,1.0,0.0
-214,"Anteroventral thalamic nucleus, dorsomedial part",239,121,218,1.0,1.0,0.0
-215,"Anteroventral thalamic nucleus, ventrolateral part",101,35,142,1.0,1.0,0.0
-216,Rhomboid thalamic nucleus,0,255,17,1.0,1.0,0.0
-218,Xiphoid thalamic nucleus,35,255,236,1.0,1.0,0.0
-219,Reuniens thalamic nucleus,255,170,0,1.0,1.0,0.0
-221,Ventromedial thalamic nucleus,0,185,126,1.0,1.0,0.0
-222,Submedius thalamic nucleus,130,0,217,1.0,1.0,0.0
-223,Angular thalamic nucleus,139,93,139,1.0,1.0,0.0
-227,Ventral posteromedial thalamic nucleus,255,0,254,1.0,1.0,0.0
-228,"Laterodorsal thalamic nucleus, dorsomedial part",255,123,0,1.0,1.0,0.0
-229,"Laterodorsal thalamic nucleus, ventrolateral part",43,153,31,1.0,1.0,0.0
-230,Posterior thalamic nucleus,255,255,2,1.0,1.0,0.0
-231,Ventrolateral thalamic nucleus,170,170,255,1.0,1.0,0.0
-232,"Mediodorsal thalamic nucleus, lateral part",255,85,127,1.0,1.0,0.0
-233,"Mediodorsal thalamic nucleus, central part",85,170,0,1.0,1.0,0.0
-235,"Zona incerta, dorsal part",216,191,217,1.0,1.0,0.0
-236,"Zona incerta, ventral part",75,200,138,1.0,1.0,0.0
-238,"Zona incerta, A13 dopamine cells",194,71,79,1.0,1.0,0.0
-239,pretectothalamic lamina,219,143,247,1.0,1.0,0.0
-240,"Mediodorsal thalamic nucleus, medial part",170,255,255,1.0,1.0,0.0
-242,Paraventricular thalamic nuclei (anterior and posterior),156,51,51,1.0,1.0,0.0
-246,Paracentral thalamic nucleus,240,248,255,1.0,1.0,0.0
-247,Central medial thalamic nucleus,224,182,64,1.0,1.0,0.0
-248,Central lateral thalamic nucleus,153,50,204,1.0,1.0,0.0
-249,"external medullary lamina, unspecified",170,255,0,1.0,1.0,0.0
-254,Anteromedial thalamic nucleus,0,85,255,1.0,1.0,0.0
-255,Interanteromedial thalamic nucleus,248,117,222,1.0,1.0,0.0
-257,"Zona incerta, rostral part",30,144,255,1.0,1.0,0.0
-260,Intermediodorsal thalamic nucleus,160,82,45,1.0,1.0,0.0
-266,"Ventral posterior nucleus of the thalamus, parvicellular part",0,255,8,1.0,1.0,0.0
-267,Parafascicular thalamic nucleus,255,239,213,1.0,1.0,0.0
-268,Retroreuniens thalamic nucleus,0,0,205,1.0,1.0,0.0
-270,superior cerebellar peduncle and prerubral field,210,182,140,1.0,1.0,0.0
-272,Intergeniculate leaflet,0,0,128,1.0,1.0,0.0
-278,Subparafascicular nucleus,233,150,122,1.0,1.0,0.0
-280,Fields of Forel,255,250,250,1.0,1.0,0.0
-281,Subgeniculate nucleus,147,112,219,1.0,1.0,0.0
-282,Ethmoid-Limitans nucleus,131,50,128,1.0,1.0,0.0
-283,"Lateral posterior thalamic nucleus, lateral part",199,87,61,1.0,1.0,0.0
-284,"Zona incerta, A11 dopamine cells",255,182,193,1.0,1.0,0.0
-285,"Lateral posterior thalamic nucleus, mediorostral part",60,179,113,1.0,1.0,0.0
-286,"Lateral posterior thalamic nucleus, mediocaudal part",255,235,205,1.0,1.0,0.0
-287,"Zona incerta, caudal part",255,228,196,1.0,1.0,0.0
-290,intramedullary thalamic area,155,148,111,1.0,1.0,0.0
-291,internal medullary lamina,255,92,10,1.0,1.0,0.0
-293,Ventral anterior thalamic nucleus,255,136,0,1.0,1.0,0.0
-294,Ventral posterolateral thalamic nucleus,171,86,62,1.0,1.0,0.0
-295,"Medial geniculate body, dorsal division",239,163,0,1.0,1.0,0.0
-297,"Medial geniculate body, medial division",10,244,217,1.0,1.0,0.0
-298,"Medial geniculate body, ventral division",131,58,31,1.0,1.0,0.0
-299,"Medial geniculate body, suprageniculate nucleus",10,244,150,1.0,1.0,0.0
-400,Ventrolateral orbital area,255,0,1,1.0,1.0,0.0
-401,Lateral orbital area,255,174,201,1.0,1.0,0.0
-402,Ventral orbital area,200,191,231,1.0,1.0,0.0
-403,Medial orbital area,63,72,204,1.0,1.0,0.0
-404,Dorsolateral orbital area,185,122,87,1.0,1.0,0.0
-405,Prelimbic area,163,73,164,1.0,1.0,0.0
-406,Secondary motor area,0,162,232,1.0,1.0,0.0
-407,Frontal association area 3,136,0,21,1.0,1.0,0.0
-408,Primary motor area,153,217,234,1.0,1.0,0.0
-409,"Agranular insular cortex, ventral area",255,201,14,1.0,1.0,0.0
-410,Agranular insular cortex dorsal area ,255,127,39,1.0,1.0,0.0
-411,Cingulate area 1,0,128,128,1.0,1.0,0.0
-412,Claustrum,153,217,200,1.0,1.0,0.0
-413,Infralimbic area,34,177,76,1.0,1.0,0.0
-414,Dysgranular insular cortex,255,242,0,1.0,1.0,0.0
-416,Granular insular cortex,239,228,176,1.0,1.0,0.0
-417,"Primary somatosensory area, forelimb representation",185,14,131,1.0,1.0,0.0
-418,"Primary somatosensory area, dysgranular zone",237,28,36,1.0,1.0,0.0
-420,"Primary somatosensory area, face representation",255,128,192,1.0,1.0,0.0
-422,Secondary somatosensory area,200,100,250,1.0,1.0,0.0
-423,"Primary somatosensory area, hindlimb representation",136,100,21,1.0,1.0,0.0
-424,"Agranular insular cortex, posterior area ",181,230,29,1.0,1.0,0.0
-425,"Primary somatosensory area, barrel field",120,177,76,1.0,1.0,0.0
-427,Retrosplenial dysgranular area,200,73,164,1.0,1.0,0.0
-429,"Primary somatosensory area, trunk representation",225,150,201,1.0,1.0,0.0
-430,Retrosplenial granular area,25,100,200,1.0,1.0,0.0
-432,"Parietal association cortex, lateral area",255,240,29,1.0,1.0,0.0
-433,"Parietal association cortex, medial area",108,0,108,1.0,1.0,0.0
-436,"Parietal association cortex, posterior area ",128,0,64,1.0,1.0,0.0
-442,Primary visual area,84,52,35,1.0,1.0,0.0
-443,"Secondary visual area, lateral part",255,100,100,1.0,1.0,0.0
-444,Temporal association cortex,0,128,0,1.0,1.0,0.0
-448,"Secondary visual area, medial part",128,0,100,1.0,1.0,0.0
-500,Endopiriform nucleus,1,10,100,1.0,1.0,0.0
-501,"Amygdaloid area, unspecified",2,20,200,1.0,1.0,0.0
-502,Nucleus of the lateral olfactory tract,230,184,67,1.0,1.0,0.0
diff --git a/annotation_volumes/allen2015_colours.csv b/annotation_volumes/allen2015_colours.csv
deleted file mode 100644
index 68e4e023ede33cfb43a35ebc2e891235cf924884..0000000000000000000000000000000000000000
--- a/annotation_volumes/allen2015_colours.csv
+++ /dev/null
@@ -1,1289 +0,0 @@
-idx,name,r,g,b,a,VIS,MSH
-0,Clear Label,0,0,0,1.0,1.0,1.0
-997,root,255,255,255,1.0,1.0,1.0
-8,Basic cell groups and regions,191,218,227,1.0,1.0,1.0
-567,Cerebrum,176,240,255,1.0,1.0,1.0
-688,Cerebral cortex,176,255,184,1.0,1.0,1.0
-695,Cortical plate,112,255,112,1.0,1.0,1.0
-315,Isocortex,112,255,113,1.0,1.0,1.0
-184,"Frontal pole, cerebral cortex",38,143,69,1.0,1.0,1.0
-68,"Frontal pole, layer 1",38,143,69,1.0,1.0,1.0
-667,"Frontal pole, layer 2/3",38,143,69,1.0,1.0,1.0
-500,Somatomotor areas,31,157,90,1.0,1.0,1.0
-107,"Somatomotor areas, Layer 1",31,157,90,1.0,1.0,1.0
-219,"Somatomotor areas, Layer 2/3",31,157,90,1.0,1.0,1.0
-299,"Somatomotor areas, Layer 5",31,157,90,1.0,1.0,1.0
-644,"Somatomotor areas, Layer 6a",31,157,90,1.0,1.0,1.0
-947,"Somatomotor areas, Layer 6b",31,157,90,1.0,1.0,1.0
-985,Primary motor area,31,157,90,1.0,1.0,1.0
-320,"Primary motor area, Layer 1",31,157,90,1.0,1.0,1.0
-943,"Primary motor area, Layer 2/3",31,157,90,1.0,1.0,1.0
-648,"Primary motor area, Layer 5",31,157,90,1.0,1.0,1.0
-844,"Primary motor area, Layer 6a",31,157,90,1.0,1.0,1.0
-882,"Primary motor area, Layer 6b",31,157,90,1.0,1.0,1.0
-993,Secondary motor area,31,157,90,1.0,1.0,1.0
-656,"Secondary motor area, layer 1",31,157,90,1.0,1.0,1.0
-962,"Secondary motor area, layer 2/3",31,157,90,1.0,1.0,1.0
-767,"Secondary motor area, layer 5",31,157,90,1.0,1.0,1.0
-1021,"Secondary motor area, layer 6a",31,157,90,1.0,1.0,1.0
-1085,"Secondary motor area, layer 6b",31,157,90,1.0,1.0,1.0
-453,Somatosensory areas,24,128,100,1.0,1.0,1.0
-12993,"Somatosensory areas, layer 1",24,128,100,1.0,1.0,1.0
-12994,"Somatosensory areas, layer 2/3",24,128,100,1.0,1.0,1.0
-12995,"Somatosensory areas, layer 4",24,128,100,1.0,1.0,1.0
-12996,"Somatosensory areas, layer 5",24,128,100,1.0,1.0,1.0
-12997,"Somatosensory areas, layer 6a",24,128,100,1.0,1.0,1.0
-12998,"Somatosensory areas, layer 6b",24,128,100,1.0,1.0,1.0
-322,Primary somatosensory area,24,128,100,1.0,1.0,1.0
-793,"Primary somatosensory area, layer 1",24,128,100,1.0,1.0,1.0
-346,"Primary somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0
-865,"Primary somatosensory area, layer 4",24,128,100,1.0,1.0,1.0
-921,"Primary somatosensory area, layer 5",24,128,100,1.0,1.0,1.0
-686,"Primary somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0
-719,"Primary somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0
-353,"Primary somatosensory area, nose",24,128,100,1.0,1.0,1.0
-558,"Primary somatosensory area, nose, layer 1",24,128,100,1.0,1.0,1.0
-838,"Primary somatosensory area, nose, layer 2/3",24,128,100,1.0,1.0,1.0
-654,"Primary somatosensory area, nose, layer 4",24,128,100,1.0,1.0,1.0
-702,"Primary somatosensory area, nose, layer 5",24,128,100,1.0,1.0,1.0
-889,"Primary somatosensory area, nose, layer 6a",24,128,100,1.0,1.0,1.0
-929,"Primary somatosensory area, nose, layer 6b",24,128,100,1.0,1.0,1.0
-329,"Primary somatosensory area, barrel field",24,128,100,1.0,1.0,1.0
-981,"Primary somatosensory area, barrel field, layer 1",24,128,100,1.0,1.0,1.0
-201,"Primary somatosensory area, barrel field, layer 2/3",24,128,100,1.0,1.0,1.0
-1047,"Primary somatosensory area, barrel field, layer 4",24,128,100,1.0,1.0,1.0
-1070,"Primary somatosensory area, barrel field, layer 5",24,128,100,1.0,1.0,1.0
-1038,"Primary somatosensory area, barrel field, layer 6a",24,128,100,1.0,1.0,1.0
-1062,"Primary somatosensory area, barrel field, layer 6b",24,128,100,1.0,1.0,1.0
-480149202,Rostrolateral lateral visual area,24,128,100,1.0,1.0,1.0
-480149206,"Rostrolateral lateral visual area, layer 1",24,128,100,1.0,1.0,1.0
-480149210,"Rostrolateral lateral visual area, layer 2/3",24,128,100,1.0,1.0,1.0
-480149214,"Rostrolateral lateral visual area, layer 4",24,128,100,1.0,1.0,1.0
-480149218,"Rostrolateral lateral visual area,layer 5",24,128,100,1.0,1.0,1.0
-480149222,"Rostrolateral lateral visual area, layer 6a",24,128,100,1.0,1.0,1.0
-480149226,"Rostrolateral lateral visual area, layer 6b",24,128,100,1.0,1.0,1.0
-337,"Primary somatosensory area, lower limb",24,128,100,1.0,1.0,1.0
-1030,"Primary somatosensory area, lower limb, layer 1",24,128,100,1.0,1.0,1.0
-113,"Primary somatosensory area, lower limb, layer 2/3",24,128,100,1.0,1.0,1.0
-1094,"Primary somatosensory area, lower limb, layer 4",24,128,100,1.0,1.0,1.0
-1128,"Primary somatosensory area, lower limb, layer 5",24,128,100,1.0,1.0,1.0
-478,"Primary somatosensory area, lower limb, layer 6a",24,128,100,1.0,1.0,1.0
-510,"Primary somatosensory area, lower limb, layer 6b",24,128,100,1.0,1.0,1.0
-345,"Primary somatosensory area, mouth",24,128,100,1.0,1.0,1.0
-878,"Primary somatosensory area, mouth, layer 1",24,128,100,1.0,1.0,1.0
-657,"Primary somatosensory area, mouth, layer 2/3",24,128,100,1.0,1.0,1.0
-950,"Primary somatosensory area, mouth, layer 4",24,128,100,1.0,1.0,1.0
-974,"Primary somatosensory area, mouth, layer 5",24,128,100,1.0,1.0,1.0
-1102,"Primary somatosensory area, mouth, layer 6a",24,128,100,1.0,1.0,1.0
-2,"Primary somatosensory area, mouth, layer 6b",24,128,100,1.0,1.0,1.0
-369,"Primary somatosensory area, upper limb",24,128,100,1.0,1.0,1.0
-450,"Primary somatosensory area, upper limb, layer 1",24,128,100,1.0,1.0,1.0
-854,"Primary somatosensory area, upper limb, layer 2/3",24,128,100,1.0,1.0,1.0
-577,"Primary somatosensory area, upper limb, layer 4",24,128,100,1.0,1.0,1.0
-625,"Primary somatosensory area, upper limb, layer 5",24,128,100,1.0,1.0,1.0
-945,"Primary somatosensory area, upper limb, layer 6a",24,128,100,1.0,1.0,1.0
-1026,"Primary somatosensory area, upper limb, layer 6b",24,128,100,1.0,1.0,1.0
-361,"Primary somatosensory area, trunk",24,128,100,1.0,1.0,1.0
-1006,"Primary somatosensory area, trunk, layer 1",24,128,100,1.0,1.0,1.0
-670,"Primary somatosensory area, trunk, layer 2/3",24,128,100,1.0,1.0,1.0
-1086,"Primary somatosensory area, trunk, layer 4",24,128,100,1.0,1.0,1.0
-1111,"Primary somatosensory area, trunk, layer 5",24,128,100,1.0,1.0,1.0
-9,"Primary somatosensory area, trunk, layer 6a",24,128,100,1.0,1.0,1.0
-461,"Primary somatosensory area, trunk, layer 6b",24,128,100,1.0,1.0,1.0
-182305689,"Primary somatosensory area, unassigned",24,128,100,1.0,1.0,1.0
-182305693,"Primary somatosensory area, unassigned, layer 1",24,128,100,1.0,1.0,1.0
-182305697,"Primary somatosensory area, unassigned, layer 2/3",24,128,100,1.0,1.0,1.0
-182305701,"Primary somatosensory area, unassigned, layer 4",24,128,100,1.0,1.0,1.0
-182305705,"Primary somatosensory area, unassigned, layer 5",24,128,100,1.0,1.0,1.0
-182305709,"Primary somatosensory area, unassigned, layer 6a",24,128,100,1.0,1.0,1.0
-182305713,"Primary somatosensory area, unassigned, layer 6b",24,128,100,1.0,1.0,1.0
-378,Supplemental somatosensory area,24,128,100,1.0,1.0,1.0
-873,"Supplemental somatosensory area, layer 1",24,128,100,1.0,1.0,1.0
-806,"Supplemental somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0
-1035,"Supplemental somatosensory area, layer 4",24,128,100,1.0,1.0,1.0
-1090,"Supplemental somatosensory area, layer 5",24,128,100,1.0,1.0,1.0
-862,"Supplemental somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0
-893,"Supplemental somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0
-1057,Gustatory areas,0,156,117,1.0,1.0,1.0
-36,"Gustatory areas, layer 1",0,156,117,1.0,1.0,1.0
-180,"Gustatory areas, layer 2/3",0,156,117,1.0,1.0,1.0
-148,"Gustatory areas, layer 4",0,156,117,1.0,1.0,1.0
-187,"Gustatory areas, layer 5",0,156,117,1.0,1.0,1.0
-638,"Gustatory areas, layer 6a",0,156,117,1.0,1.0,1.0
-662,"Gustatory areas, layer 6b",0,156,117,1.0,1.0,1.0
-677,Visceral area,17,173,131,1.0,1.0,1.0
-897,"Visceral area, layer 1",17,173,131,1.0,1.0,1.0
-1106,"Visceral area, layer 2/3",17,173,131,1.0,1.0,1.0
-1010,"Visceral area, layer 4",17,173,131,1.0,1.0,1.0
-1058,"Visceral area, layer 5",17,173,131,1.0,1.0,1.0
-857,"Visceral area, layer 6a",17,173,131,1.0,1.0,1.0
-849,"Visceral area, layer 6b",17,173,131,1.0,1.0,1.0
-247,Auditory areas,1,147,153,1.0,1.0,1.0
-1011,Dorsal auditory area,1,147,153,1.0,1.0,1.0
-527,"Dorsal auditory area, layer 1",1,147,153,1.0,1.0,1.0
-600,"Dorsal auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-678,"Dorsal auditory area, layer 4",1,147,153,1.0,1.0,1.0
-252,"Dorsal auditory area, layer 5",1,147,153,1.0,1.0,1.0
-156,"Dorsal auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-243,"Dorsal auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-480149230,Laterolateral anterior visual area,1,147,153,1.0,1.0,1.0
-480149234,"Laterolateral anterior visual area, layer 1",1,147,153,1.0,1.0,1.0
-480149238,"Laterolateral anterior visual area, layer 2/3",1,147,153,1.0,1.0,1.0
-480149242,"Laterolateral anterior visual area, layer 4",1,147,153,1.0,1.0,1.0
-480149246,"Laterolateral anterior visual area,layer 5",1,147,153,1.0,1.0,1.0
-480149250,"Laterolateral anterior visual area, layer 6a",1,147,153,1.0,1.0,1.0
-480149254,"Laterolateral anterior visual area, layer 6b",1,147,153,1.0,1.0,1.0
-1002,Primary auditory area,1,147,153,1.0,1.0,1.0
-735,"Primary auditory area, layer 1",1,147,153,1.0,1.0,1.0
-251,"Primary auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-816,"Primary auditory area, layer 4",1,147,153,1.0,1.0,1.0
-847,"Primary auditory area, layer 5",1,147,153,1.0,1.0,1.0
-954,"Primary auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-1005,"Primary auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-1027,Posterior auditory area,1,147,153,1.0,1.0,1.0
-696,"Posterior auditory area, layer 1",1,147,153,1.0,1.0,1.0
-643,"Posterior auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-759,"Posterior auditory area, layer 4",1,147,153,1.0,1.0,1.0
-791,"Posterior auditory area, layer 5",1,147,153,1.0,1.0,1.0
-249,"Posterior auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-456,"Posterior auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-1018,Ventral auditory area,1,147,153,1.0,1.0,1.0
-959,"Ventral auditory area, layer 1",1,147,153,1.0,1.0,1.0
-755,"Ventral auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-990,"Ventral auditory area, layer 4",1,147,153,1.0,1.0,1.0
-1023,"Ventral auditory area, layer 5",1,147,153,1.0,1.0,1.0
-520,"Ventral auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-598,"Ventral auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-669,Visual areas,8,133,140,1.0,1.0,1.0
-801,"Visual areas, layer 1",8,133,140,1.0,1.0,1.0
-561,"Visual areas, layer 2/3",8,133,140,1.0,1.0,1.0
-913,"Visual areas, layer 4",8,133,140,1.0,1.0,1.0
-937,"Visual areas, layer 5",8,133,140,1.0,1.0,1.0
-457,"Visual areas, layer 6a",8,133,140,1.0,1.0,1.0
-497,"Visual areas, layer 6b",8,133,140,1.0,1.0,1.0
-402,Anterolateral visual area,8,133,140,1.0,1.0,1.0
-1074,"Anterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-905,"Anterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-1114,"Anterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-233,"Anterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-601,"Anterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-649,"Anterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-394,Anteromedial visual area,8,133,140,1.0,1.0,1.0
-281,"Anteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0
-1066,"Anteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-401,"Anteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0
-433,"Anteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0
-1046,"Anteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0
-441,"Anteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0
-409,Lateral visual area,8,133,140,1.0,1.0,1.0
-421,"Lateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-973,"Lateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-573,"Lateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-613,"Lateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-74,"Lateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-121,"Lateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-385,Primary visual area,8,133,140,1.0,1.0,1.0
-593,"Primary visual area, layer 1",8,133,140,1.0,1.0,1.0
-821,"Primary visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-721,"Primary visual area, layer 4",8,133,140,1.0,1.0,1.0
-778,"Primary visual area, layer 5",8,133,140,1.0,1.0,1.0
-33,"Primary visual area, layer 6a",8,133,140,1.0,1.0,1.0
-305,"Primary visual area, layer 6b",8,133,140,1.0,1.0,1.0
-425,Posterolateral visual area,8,133,140,1.0,1.0,1.0
-750,"Posterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-269,"Posterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-869,"Posterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-902,"Posterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-377,"Posterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-393,"Posterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-533,posteromedial visual area,8,133,140,1.0,1.0,1.0
-805,"posteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0
-41,"posteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-501,"posteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0
-565,"posteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0
-257,"posteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0
-469,"posteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0
-312782574,Laterointermediate area,8,133,140,1.0,1.0,1.0
-312782578,"Laterointermediate area, layer 1",8,133,140,1.0,1.0,1.0
-312782582,"Laterointermediate area, layer 2/3",8,133,140,1.0,1.0,1.0
-312782586,"Laterointermediate area, layer 4",8,133,140,1.0,1.0,1.0
-312782590,"Laterointermediate area, layer 5",8,133,140,1.0,1.0,1.0
-312782594,"Laterointermediate area, layer 6a",8,133,140,1.0,1.0,1.0
-312782598,"Laterointermediate area, layer 6b",8,133,140,1.0,1.0,1.0
-312782628,Postrhinal area,8,133,140,1.0,1.0,1.0
-312782632,"Postrhinal area, layer 1",8,133,140,1.0,1.0,1.0
-312782636,"Postrhinal area, layer 2/3",8,133,140,1.0,1.0,1.0
-312782640,"Postrhinal area, layer 4",8,133,140,1.0,1.0,1.0
-312782644,"Postrhinal area, layer 5",8,133,140,1.0,1.0,1.0
-312782648,"Postrhinal area, layer 6a",8,133,140,1.0,1.0,1.0
-312782652,"Postrhinal area, layer 6b",8,133,140,1.0,1.0,1.0
-31,Anterior cingulate area,64,166,102,1.0,1.0,1.0
-572,"Anterior cingulate area, layer 1",64,166,102,1.0,1.0,1.0
-1053,"Anterior cingulate area, layer 2/3",64,166,102,1.0,1.0,1.0
-739,"Anterior cingulate area, layer 5",64,166,102,1.0,1.0,1.0
-179,"Anterior cingulate area, layer 6a",64,166,102,1.0,1.0,1.0
-227,"Anterior cingulate area, layer 6b",64,166,102,1.0,1.0,1.0
-39,"Anterior cingulate area, dorsal part",64,166,102,1.0,1.0,1.0
-935,"Anterior cingulate area, dorsal part, layer 1",64,166,102,1.0,1.0,1.0
-211,"Anterior cingulate area, dorsal part, layer 2/3",64,166,102,1.0,1.0,1.0
-1015,"Anterior cingulate area, dorsal part, layer 5",64,166,102,1.0,1.0,1.0
-919,"Anterior cingulate area, dorsal part, layer 6a",64,166,102,1.0,1.0,1.0
-927,"Anterior cingulate area, dorsal part, layer 6b",64,166,102,1.0,1.0,1.0
-48,"Anterior cingulate area, ventral part",64,166,102,1.0,1.0,1.0
-588,"Anterior cingulate area, ventral part, layer 1",64,166,102,1.0,1.0,1.0
-296,"Anterior cingulate area, ventral part, layer 2/3",64,166,102,1.0,1.0,1.0
-772,"Anterior cingulate area, ventral part, layer 5",64,166,102,1.0,1.0,1.0
-810,"Anterior cingulate area, ventral part, 6a",64,166,102,1.0,1.0,1.0
-819,"Anterior cingulate area, ventral part, 6b",64,166,102,1.0,1.0,1.0
-972,Prelimbic area,47,168,80,1.0,1.0,1.0
-171,"Prelimbic area, layer 1",47,168,80,1.0,1.0,1.0
-195,"Prelimbic area, layer 2",47,168,80,1.0,1.0,1.0
-304,"Prelimbic area, layer 2/3",47,168,80,1.0,1.0,1.0
-363,"Prelimbic area, layer 5",47,168,80,1.0,1.0,1.0
-84,"Prelimbic area, layer 6a",47,168,80,1.0,1.0,1.0
-132,"Prelimbic area, layer 6b",47,168,80,1.0,1.0,1.0
-44,Infralimbic area,89,179,99,1.0,1.0,1.0
-707,"Infralimbic area, layer 1",89,179,99,1.0,1.0,1.0
-747,"Infralimbic area, layer 2",89,179,99,1.0,1.0,1.0
-556,"Infralimbic area, layer 2/3",89,179,99,1.0,1.0,1.0
-827,"Infralimbic area, layer 5",89,179,99,1.0,1.0,1.0
-1054,"Infralimbic area, layer 6a",89,179,99,1.0,1.0,1.0
-1081,"Infralimbic area, layer 6b",89,179,99,1.0,1.0,1.0
-714,Orbital area,36,138,94,1.0,1.0,1.0
-264,"Orbital area, layer 1",36,138,94,1.0,1.0,1.0
-492,"Orbital area, layer 2/3",36,138,94,1.0,1.0,1.0
-352,"Orbital area, layer 5",36,138,94,1.0,1.0,1.0
-476,"Orbital area, layer 6a",36,138,94,1.0,1.0,1.0
-516,"Orbital area, layer 6b",36,138,94,1.0,1.0,1.0
-723,"Orbital area, lateral part",36,138,94,1.0,1.0,1.0
-448,"Orbital area, lateral part, layer 1",36,138,94,1.0,1.0,1.0
-412,"Orbital area, lateral part, layer 2/3",36,138,94,1.0,1.0,1.0
-630,"Orbital area, lateral part, layer 5",36,138,94,1.0,1.0,1.0
-440,"Orbital area, lateral part, layer 6a",36,138,94,1.0,1.0,1.0
-488,"Orbital area, lateral part, layer 6b",36,138,94,1.0,1.0,1.0
-731,"Orbital area, medial part",36,138,94,1.0,1.0,1.0
-484,"Orbital area, medial part, layer 1",36,138,94,1.0,1.0,1.0
-524,"Orbital area, medial part, layer 2",36,138,94,1.0,1.0,1.0
-582,"Orbital area, medial part, layer 2/3",36,138,94,1.0,1.0,1.0
-620,"Orbital area, medial part, layer 5",36,138,94,1.0,1.0,1.0
-910,"Orbital area, medial part, layer 6a",36,138,94,1.0,1.0,1.0
-738,"Orbital area, ventral part",36,138,94,1.0,1.0,1.0
-746,"Orbital area, ventrolateral part",36,138,94,1.0,1.0,1.0
-969,"Orbital area, ventrolateral part, layer 1",36,138,94,1.0,1.0,1.0
-288,"Orbital area, ventrolateral part, layer 2/3",36,138,94,1.0,1.0,1.0
-1125,"Orbital area, ventrolateral part, layer 5",36,138,94,1.0,1.0,1.0
-608,"Orbital area, ventrolateral part, layer 6a",36,138,94,1.0,1.0,1.0
-680,"Orbital area, ventrolateral part, layer 6b",36,138,94,1.0,1.0,1.0
-95,Agranular insular area,33,152,102,1.0,1.0,1.0
-104,"Agranular insular area, dorsal part",33,152,102,1.0,1.0,1.0
-996,"Agranular insular area, dorsal part, layer 1",33,152,102,1.0,1.0,1.0
-328,"Agranular insular area, dorsal part, layer 2/3",33,152,102,1.0,1.0,1.0
-1101,"Agranular insular area, dorsal part, layer 5",33,152,102,1.0,1.0,1.0
-783,"Agranular insular area, dorsal part, layer 6a",33,152,102,1.0,1.0,1.0
-831,"Agranular insular area, dorsal part, layer 6b",33,152,102,1.0,1.0,1.0
-111,"Agranular insular area, posterior part",33,152,102,1.0,1.0,1.0
-120,"Agranular insular area, posterior part, layer 1",33,152,102,1.0,1.0,1.0
-163,"Agranular insular area, posterior part, layer 2/3",33,152,102,1.0,1.0,1.0
-344,"Agranular insular area, posterior part, layer 5",33,152,102,1.0,1.0,1.0
-314,"Agranular insular area, posterior part, layer 6a",33,152,102,1.0,1.0,1.0
-355,"Agranular insular area, posterior part, layer 6b",33,152,102,1.0,1.0,1.0
-119,"Agranular insular area, ventral part",33,152,102,1.0,1.0,1.0
-704,"Agranular insular area, ventral part, layer 1",33,152,102,1.0,1.0,1.0
-694,"Agranular insular area, ventral part, layer 2/3",33,152,102,1.0,1.0,1.0
-800,"Agranular insular area, ventral part, layer 5",33,152,102,1.0,1.0,1.0
-675,"Agranular insular area, ventral part, layer 6a",33,152,102,1.0,1.0,1.0
-699,"Agranular insular area, ventral part, layer 6b",33,152,102,1.0,1.0,1.0
-254,Retrosplenial area,26,166,152,1.0,1.0,1.0
-894,"Retrosplenial area, lateral agranular part",26,166,152,1.0,1.0,1.0
-671,"Retrosplenial area, lateral agranular part, layer 1",26,166,152,1.0,1.0,1.0
-965,"Retrosplenial area, lateral agranular part, layer 2/3",26,166,152,1.0,1.0,1.0
-774,"Retrosplenial area, lateral agranular part, layer 5",26,166,152,1.0,1.0,1.0
-906,"Retrosplenial area, lateral agranular part, layer 6a",26,166,152,1.0,1.0,1.0
-279,"Retrosplenial area, lateral agranular part, layer 6b",26,166,152,1.0,1.0,1.0
-480149258,Mediomedial anterior visual area,26,166,152,1.0,1.0,1.0
-480149262,"Mediomedial anterior visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149266,"Mediomedial anterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149270,"Mediomedial anterior visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149274,"Mediomedial anterior visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149278,"Mediomedial anterior visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149282,"Mediomedial anterior visual area, layer 6b",26,166,152,1.0,1.0,1.0
-480149286,Mediomedial posterior visual area,26,166,152,1.0,1.0,1.0
-480149290,"Mediomedial posterior visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149294,"Mediomedial posterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149298,"Mediomedial posterior visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149302,"Mediomedial posterior visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149306,"Mediomedial posterior visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149310,"Mediomedial posterior visual area, layer 6b",26,166,152,1.0,1.0,1.0
-480149314,Medial visual area,26,166,152,1.0,1.0,1.0
-480149318,"Medial visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149322,"Medial visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149326,"Medial visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149330,"Medial visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149334,"Medial visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149338,"Medial visual area, layer 6b",26,166,152,1.0,1.0,1.0
-879,"Retrosplenial area, dorsal part",26,166,152,1.0,1.0,1.0
-442,"Retrosplenial area, dorsal part, layer 1",26,166,152,1.0,1.0,1.0
-434,"Retrosplenial area, dorsal part, layer 2/3",26,166,152,1.0,1.0,1.0
-545,"Retrosplenial area, dorsal part, layer 4",26,166,152,1.0,1.0,1.0
-610,"Retrosplenial area, dorsal part, layer 5",26,166,152,1.0,1.0,1.0
-274,"Retrosplenial area, dorsal part, layer 6a",26,166,152,1.0,1.0,1.0
-330,"Retrosplenial area, dorsal part, layer 6b",26,166,152,1.0,1.0,1.0
-886,"Retrosplenial area, ventral part",26,166,152,1.0,1.0,1.0
-542,"Retrosplenial area, ventral part, layer 1",26,166,152,1.0,1.0,1.0
-606,"Retrosplenial area, ventral part, layer 2",26,166,152,1.0,1.0,1.0
-430,"Retrosplenial area, ventral part, layer 2/3",26,166,152,1.0,1.0,1.0
-687,"Retrosplenial area, ventral part, layer 5",26,166,152,1.0,1.0,1.0
-590,"Retrosplenial area, ventral part, layer 6a",26,166,152,1.0,1.0,1.0
-622,"Retrosplenial area, ventral part, layer 6b",26,166,152,1.0,1.0,1.0
-22,Posterior parietal association areas,0,159,172,1.0,1.0,1.0
-532,"Posterior parietal association areas, layer 1",0,159,172,1.0,1.0,1.0
-241,"Posterior parietal association areas, layer 2/3",0,159,172,1.0,1.0,1.0
-635,"Posterior parietal association areas, layer 4",0,159,172,1.0,1.0,1.0
-683,"Posterior parietal association areas, layer 5",0,159,172,1.0,1.0,1.0
-308,"Posterior parietal association areas, layer 6a",0,159,172,1.0,1.0,1.0
-340,"Posterior parietal association areas, layer 6b",0,159,172,1.0,1.0,1.0
-312782546,Anterior area,0,159,172,1.0,1.0,1.0
-312782550,"Anterior area, layer 1",0,159,172,1.0,1.0,1.0
-312782554,"Anterior area, layer 2/3",0,159,172,1.0,1.0,1.0
-312782558,"Anterior area, layer 4",0,159,172,1.0,1.0,1.0
-312782562,"Anterior area, layer 5",0,159,172,1.0,1.0,1.0
-312782566,"Anterior area, layer 6a",0,159,172,1.0,1.0,1.0
-312782570,"Anterior area, layer 6b",0,159,172,1.0,1.0,1.0
-417,Rostrolateral visual area,0,159,172,1.0,1.0,1.0
-312782604,"Rostrolateral area, layer 1",0,159,172,1.0,1.0,1.0
-312782608,"Rostrolateral area, layer 2/3",0,159,172,1.0,1.0,1.0
-312782612,"Rostrolateral area, layer 4",0,159,172,1.0,1.0,1.0
-312782616,"Rostrolateral area, layer 5",0,159,172,1.0,1.0,1.0
-312782620,"Rostrolateral area, layer 6a",0,159,172,1.0,1.0,1.0
-312782624,"Rostrolateral area, layer 6b",0,159,172,1.0,1.0,1.0
-541,Temporal association areas,21,176,179,1.0,1.0,1.0
-97,"Temporal association areas, layer 1",21,176,179,1.0,1.0,1.0
-1127,"Temporal association areas, layer 2/3",21,176,179,1.0,1.0,1.0
-234,"Temporal association areas, layer 4",21,176,179,1.0,1.0,1.0
-289,"Temporal association areas, layer 5",21,176,179,1.0,1.0,1.0
-729,"Temporal association areas, layer 6a",21,176,179,1.0,1.0,1.0
-786,"Temporal association areas, layer 6b",21,176,179,1.0,1.0,1.0
-922,Perirhinal area,14,150,132,1.0,1.0,1.0
-335,"Perirhinal area, layer 6a",14,150,132,1.0,1.0,1.0
-368,"Perirhinal area, layer 6b",14,150,132,1.0,1.0,1.0
-540,"Perirhinal area, layer 1",14,150,132,1.0,1.0,1.0
-692,"Perirhinal area, layer 5",14,150,132,1.0,1.0,1.0
-888,"Perirhinal area, layer 2/3",14,150,132,1.0,1.0,1.0
-895,Ectorhinal area,13,159,145,1.0,1.0,1.0
-836,Ectorhinal area/Layer 1,13,159,145,1.0,1.0,1.0
-427,Ectorhinal area/Layer 2/3,13,159,145,1.0,1.0,1.0
-988,Ectorhinal area/Layer 5,13,159,145,1.0,1.0,1.0
-977,Ectorhinal area/Layer 6a,13,159,145,1.0,1.0,1.0
-1045,Ectorhinal area/Layer 6b,13,159,145,1.0,1.0,1.0
-698,Olfactory areas,154,210,189,1.0,1.0,1.0
-507,Main olfactory bulb,154,210,189,1.0,1.0,1.0
-212,"Main olfactory bulb, glomerular layer",130,199,174,1.0,1.0,1.0
-220,"Main olfactory bulb, granule layer",130,199,174,1.0,1.0,1.0
-228,"Main olfactory bulb, inner plexiform layer",154,210,189,1.0,1.0,1.0
-236,"Main olfactory bulb, mitral layer",130,199,174,1.0,1.0,1.0
-244,"Main olfactory bulb, outer plexiform layer",154,210,189,1.0,1.0,1.0
-151,Accessory olfactory bulb,157,240,210,1.0,1.0,1.0
-188,"Accessory olfactory bulb, glomerular layer",157,240,210,1.0,1.0,1.0
-196,"Accessory olfactory bulb, granular layer",149,228,200,1.0,1.0,1.0
-204,"Accessory olfactory bulb, mitral layer",157,240,210,1.0,1.0,1.0
-159,Anterior olfactory nucleus,84,191,148,1.0,1.0,1.0
-167,"Anterior olfactory nucleus, dorsal part",84,191,148,1.0,1.0,1.0
-175,"Anterior olfactory nucleus, external part",84,191,148,1.0,1.0,1.0
-183,"Anterior olfactory nucleus, lateral part",84,191,148,1.0,1.0,1.0
-191,"Anterior olfactory nucleus, medial part",84,191,148,1.0,1.0,1.0
-199,"Anterior olfactory nucleus, posteroventral part",84,191,148,1.0,1.0,1.0
-160,"Anterior olfactory nucleus, layer 1",84,191,148,1.0,1.0,1.0
-168,"Anterior olfactory nucleus, layer 2",84,191,148,1.0,1.0,1.0
-589,Taenia tecta,98,208,159,1.0,1.0,1.0
-597,"Taenia tecta, dorsal part",98,208,159,1.0,1.0,1.0
-297,"Taenia tecta, dorsal part, layers 1-4",98,208,159,1.0,1.0,1.0
-1034,"Taenia tecta, dorsal part, layer 1",98,208,159,1.0,1.0,1.0
-1042,"Taenia tecta, dorsal part, layer 2",98,208,159,1.0,1.0,1.0
-1050,"Taenia tecta, dorsal part, layer 3",98,208,159,1.0,1.0,1.0
-1059,"Taenia tecta, dorsal part, layer 4",98,208,159,1.0,1.0,1.0
-605,"Taenia tecta, ventral part",98,208,159,1.0,1.0,1.0
-306,"Taenia tecta, ventral part, layers 1-3",98,208,159,1.0,1.0,1.0
-1067,"Taenia tecta, ventral part, layer 1",98,208,159,1.0,1.0,1.0
-1075,"Taenia tecta, ventral part, layer 2",98,208,159,1.0,1.0,1.0
-1082,"Taenia tecta, ventral part, layer 3",98,208,159,1.0,1.0,1.0
-814,Dorsal peduncular area,164,218,164,1.0,1.0,1.0
-496,"Dorsal peduncular area, layer 1",164,218,164,1.0,1.0,1.0
-535,"Dorsal peduncular area, layer 2",164,218,164,1.0,1.0,1.0
-360,"Dorsal peduncular area, layer 2/3",164,218,164,1.0,1.0,1.0
-646,"Dorsal peduncular area, layer 5",164,218,164,1.0,1.0,1.0
-267,"Dorsal peduncular area, layer 6a",164,218,164,1.0,1.0,1.0
-961,Piriform area,106,203,186,1.0,1.0,1.0
-152,"Piriform area, layers 1-3",106,203,186,1.0,1.0,1.0
-276,"Piriform area, molecular layer",106,203,186,1.0,1.0,1.0
-284,"Piriform area, pyramidal layer",106,203,186,1.0,1.0,1.0
-291,"Piriform area, polymorph layer",106,203,186,1.0,1.0,1.0
-619,Nucleus of the lateral olfactory tract,149,228,200,1.0,1.0,1.0
-392,"Nucleus of the lateral olfactory tract, layers 1-3",149,228,200,1.0,1.0,1.0
-260,"Nucleus of the lateral olfactory tract, molecular layer",149,228,200,1.0,1.0,1.0
-268,"Nucleus of the lateral olfactory tract, pyramidal layer",149,228,200,1.0,1.0,1.0
-1139,"Nucleus of the lateral olfactory tract, layer 3",149,228,200,1.0,1.0,1.0
-631,Cortical amygdalar area,97,231,183,1.0,1.0,1.0
-639,"Cortical amygdalar area, anterior part",97,231,183,1.0,1.0,1.0
-192,"Cortical amygdalar area, anterior part, layer 1",97,231,183,1.0,1.0,1.0
-200,"Cortical amygdalar area, anterior part, layer 2",97,231,183,1.0,1.0,1.0
-208,"Cortical amygdalar area, anterior part, layer 3",97,231,183,1.0,1.0,1.0
-647,"Cortical amygdalar area, posterior part",97,231,183,1.0,1.0,1.0
-655,"Cortical amygdalar area, posterior part, lateral zone",97,231,183,1.0,1.0,1.0
-584,"Cortical amygdalar area, posterior part, lateral zone, layers 1-2",97,231,183,1.0,1.0,1.0
-376,"Cortical amygdalar area, posterior part, lateral zone, layers 1-3",97,231,183,1.0,1.0,1.0
-216,"Cortical amygdalar area, posterior part, lateral zone, layer 1",97,231,183,1.0,1.0,1.0
-224,"Cortical amygdalar area, posterior part, lateral zone, layer 2",97,231,183,1.0,1.0,1.0
-232,"Cortical amygdalar area, posterior part, lateral zone, layer 3",97,231,183,1.0,1.0,1.0
-663,"Cortical amygdalar area, posterior part, medial zone",97,231,183,1.0,1.0,1.0
-592,"Cortical amygdalar area, posterior part, medial zone, layers 1-2",97,231,183,1.0,1.0,1.0
-383,"Cortical amygdalar area, posterior part, medial zone, layers 1-3",97,231,183,1.0,1.0,1.0
-240,"Cortical amygdalar area, posterior part, medial zone, layer 1",97,231,183,1.0,1.0,1.0
-248,"Cortical amygdalar area, posterior part, medial zone, layer 2",97,231,183,1.0,1.0,1.0
-256,"Cortical amygdalar area, posterior part, medial zone, layer 3",97,231,183,1.0,1.0,1.0
-788,Piriform-amygdalar area,89,218,171,1.0,1.0,1.0
-400,"Piriform-amygdalar area, layers 1-3",89,218,171,1.0,1.0,1.0
-408,"Piriform-amygdalar area, molecular layer",89,218,171,1.0,1.0,1.0
-416,"Piriform-amygdalar area, pyramidal layer",89,218,171,1.0,1.0,1.0
-424,"Piriform-amygdalar area, polymorph layer",89,218,171,1.0,1.0,1.0
-566,Postpiriform transition area,168,236,211,1.0,1.0,1.0
-517,"Postpiriform transition area, layers 1-3",168,236,211,1.0,1.0,1.0
-1140,"Postpiriform transition area, layers 1",168,236,211,1.0,1.0,1.0
-1141,"Postpiriform transition area, layers 2",168,236,211,1.0,1.0,1.0
-1142,"Postpiriform transition area, layers 3",168,236,211,1.0,1.0,1.0
-1089,Hippocampal formation,126,208,75,1.0,1.0,1.0
-1080,Hippocampal region,126,208,75,1.0,1.0,1.0
-375,Ammon's horn,126,208,75,1.0,1.0,1.0
-382,Field CA1,126,208,75,1.0,1.0,1.0
-391,"Field CA1, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-399,"Field CA1, stratum oriens",126,208,75,1.0,1.0,1.0
-407,"Field CA1, pyramidal layer",102,168,61,1.0,1.0,1.0
-415,"Field CA1, stratum radiatum",126,208,75,1.0,1.0,1.0
-423,Field CA2,126,208,75,1.0,1.0,1.0
-431,"Field CA2, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-438,"Field CA2, stratum oriens",126,208,75,1.0,1.0,1.0
-446,"Field CA2, pyramidal layer",102,168,61,1.0,1.0,1.0
-454,"Field CA2, stratum radiatum",126,208,75,1.0,1.0,1.0
-463,Field CA3,126,208,75,1.0,1.0,1.0
-471,"Field CA3, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-479,"Field CA3, stratum lucidum",126,208,75,1.0,1.0,1.0
-486,"Field CA3, stratum oriens",126,208,75,1.0,1.0,1.0
-495,"Field CA3, pyramidal layer",102,168,61,1.0,1.0,1.0
-504,"Field CA3, stratum radiatum",126,208,75,1.0,1.0,1.0
-726,Dentate gyrus,126,208,75,1.0,1.0,1.0
-10703,"Dentate gyrus, molecular layer",126,208,75,1.0,1.0,1.0
-10704,"Dentate gyrus, polymorph layer",126,208,75,1.0,1.0,1.0
-632,"Dentate gyrus, granule cell layer",102,168,61,1.0,1.0,1.0
-10702,"Dentate gyrus, subgranular zone",126,208,75,1.0,1.0,1.0
-734,Dentate gyrus crest,126,208,75,1.0,1.0,1.0
-742,"Dentate gyrus crest, molecular layer",126,208,75,1.0,1.0,1.0
-751,"Dentate gyrus crest, polymorph layer",126,208,75,1.0,1.0,1.0
-758,"Dentate gyrus crest, granule cell layer",126,208,75,1.0,1.0,1.0
-766,Dentate gyrus lateral blade,126,208,75,1.0,1.0,1.0
-775,"Dentate gyrus lateral blade, molecular layer",126,208,75,1.0,1.0,1.0
-782,"Dentate gyrus lateral blade, polymorph layer",126,208,75,1.0,1.0,1.0
-790,"Dentate gyrus lateral blade, granule cell layer",126,208,75,1.0,1.0,1.0
-799,Dentate gyrus medial blade,126,208,75,1.0,1.0,1.0
-807,"Dentate gyrus medial blade, molecular layer",126,208,75,1.0,1.0,1.0
-815,"Dentate gyrus medial blade, polymorph layer",126,208,75,1.0,1.0,1.0
-823,"Dentate gyrus medial blade, granule cell layer",126,208,75,1.0,1.0,1.0
-982,Fasciola cinerea,126,208,75,1.0,1.0,1.0
-19,Induseum griseum,126,208,75,1.0,1.0,1.0
-822,Retrohippocampal region,50,184,37,1.0,1.0,1.0
-909,Entorhinal area,50,184,37,1.0,1.0,1.0
-918,"Entorhinal area, lateral part",50,184,37,1.0,1.0,1.0
-1121,"Entorhinal area, lateral part, layer 1",50,184,37,1.0,1.0,1.0
-20,"Entorhinal area, lateral part, layer 2",50,184,37,1.0,1.0,1.0
-999,"Entorhinal area, lateral part, layer 2/3",50,184,37,1.0,1.0,1.0
-715,"Entorhinal area, lateral part, layer 2a",50,184,37,1.0,1.0,1.0
-764,"Entorhinal area, lateral part, layer 2b",50,184,37,1.0,1.0,1.0
-52,"Entorhinal area, lateral part, layer 3",50,184,37,1.0,1.0,1.0
-92,"Entorhinal area, lateral part, layer 4",50,184,37,1.0,1.0,1.0
-312,"Entorhinal area, lateral part, layer 4/5",50,184,37,1.0,1.0,1.0
-139,"Entorhinal area, lateral part, layer 5",50,184,37,1.0,1.0,1.0
-387,"Entorhinal area, lateral part, layer 5/6",50,184,37,1.0,1.0,1.0
-28,"Entorhinal area, lateral part, layer 6a",50,184,37,1.0,1.0,1.0
-60,"Entorhinal area, lateral part, layer 6b",50,184,37,1.0,1.0,1.0
-926,"Entorhinal area, medial part, dorsal zone",50,184,37,1.0,1.0,1.0
-526,"Entorhinal area, medial part, dorsal zone, layer 1",50,184,37,1.0,1.0,1.0
-543,"Entorhinal area, medial part, dorsal zone, layer 2",50,184,37,1.0,1.0,1.0
-468,"Entorhinal area, medial part, dorsal zone, layer 2a",50,184,37,1.0,1.0,1.0
-508,"Entorhinal area, medial part, dorsal zone, layer 2b",50,184,37,1.0,1.0,1.0
-664,"Entorhinal area, medial part, dorsal zone, layer 3",50,184,37,1.0,1.0,1.0
-712,"Entorhinal area, medial part, dorsal zone, layer 4",50,184,37,1.0,1.0,1.0
-727,"Entorhinal area, medial part, dorsal zone, layer 5",50,184,37,1.0,1.0,1.0
-550,"Entorhinal area, medial part, dorsal zone, layer 5/6",50,184,37,1.0,1.0,1.0
-743,"Entorhinal area, medial part, dorsal zone, layer 6",50,184,37,1.0,1.0,1.0
-934,"Entorhinal area, medial part, ventral zone",50,184,37,1.0,1.0,1.0
-259,"Entorhinal area, medial part, ventral zone, layer 1",50,184,37,1.0,1.0,1.0
-324,"Entorhinal area, medial part, ventral zone, layer 2",50,184,37,1.0,1.0,1.0
-371,"Entorhinal area, medial part, ventral zone, layer 3",50,184,37,1.0,1.0,1.0
-419,"Entorhinal area, medial part, ventral zone, layer 4",50,184,37,1.0,1.0,1.0
-1133,"Entorhinal area, medial part, ventral zone, layer 5/6",50,184,37,1.0,1.0,1.0
-843,Parasubiculum,114,213,105,1.0,1.0,1.0
-10693,"Parasubiculum, layer 1",114,213,105,1.0,1.0,1.0
-10694,"Parasubiculum, layer 2",114,213,105,1.0,1.0,1.0
-10695,"Parasubiculum, layer 3",114,213,105,1.0,1.0,1.0
-1037,Postsubiculum,72,200,60,1.0,1.0,1.0
-10696,"Postsubiculum, layer 1",72,200,60,1.0,1.0,1.0
-10697,"Postsubiculum, layer 2",72,200,60,1.0,1.0,1.0
-10698,"Postsubiculum, layer 3",72,200,60,1.0,1.0,1.0
-1084,Presubiculum,89,185,71,1.0,1.0,1.0
-10699,"Presubiculum, layer 1",89,185,71,1.0,1.0,1.0
-10700,"Presubiculum, layer 2",89,185,71,1.0,1.0,1.0
-10701,"Presubiculum, layer 3",89,185,71,1.0,1.0,1.0
-502,Subiculum,79,194,68,1.0,1.0,1.0
-509,"Subiculum, dorsal part",79,194,68,1.0,1.0,1.0
-829,"Subiculum, dorsal part, molecular layer",79,194,68,1.0,1.0,1.0
-845,"Subiculum, dorsal part, pyramidal layer",75,181,71,1.0,1.0,1.0
-837,"Subiculum, dorsal part, stratum radiatum",79,194,68,1.0,1.0,1.0
-518,"Subiculum, ventral part",79,194,68,1.0,1.0,1.0
-853,"Subiculum, ventral part, molecular layer",79,194,68,1.0,1.0,1.0
-870,"Subiculum, ventral part, pyramidal layer",75,181,71,1.0,1.0,1.0
-861,"Subiculum, ventral part, stratum radiatum",79,194,68,1.0,1.0,1.0
-484682470,Prosubiculum,88,186,72,1.0,1.0,1.0
-484682475,"Prosubiculum, dorsal part",88,186,72,1.0,1.0,1.0
-484682479,"Prosubiculum, dorsal part, molecular layer",88,186,72,1.0,1.0,1.0
-484682483,"Prosubiculum, dorsal part, pyramidal layer",86,184,75,1.0,1.0,1.0
-484682487,"Prosubiculum, dorsal part, stratum radiatum",88,186,72,1.0,1.0,1.0
-484682492,"Prosubiculum, ventral part",88,186,72,1.0,1.0,1.0
-484682496,"Prosubiculum, ventral part, molecular layer",88,186,72,1.0,1.0,1.0
-484682500,"Prosubiculum, ventral part, pyramidal layer",86,184,75,1.0,1.0,1.0
-484682504,"Prosubiculum, ventral part, stratum radiatum",88,186,72,1.0,1.0,1.0
-484682508,Area prostriata,51,185,50,1.0,1.0,1.0
-703,Cortical subplate,138,218,135,1.0,1.0,1.0
-16,"Layer 6b, isocortex",138,218,135,1.0,1.0,1.0
-583,Claustrum,138,218,135,1.0,1.0,1.0
-942,Endopiriform nucleus,160,238,157,1.0,1.0,1.0
-952,"Endopiriform nucleus, dorsal part",160,238,157,1.0,1.0,1.0
-966,"Endopiriform nucleus, ventral part",160,238,157,1.0,1.0,1.0
-131,Lateral amygdalar nucleus,144,235,141,1.0,1.0,1.0
-295,Basolateral amygdalar nucleus,157,231,156,1.0,1.0,1.0
-303,"Basolateral amygdalar nucleus, anterior part",157,231,156,1.0,1.0,1.0
-311,"Basolateral amygdalar nucleus, posterior part",157,231,156,1.0,1.0,1.0
-451,"Basolateral amygdalar nucleus, ventral part",157,231,156,1.0,1.0,1.0
-319,Basomedial amygdalar nucleus,132,234,129,1.0,1.0,1.0
-327,"Basomedial amygdalar nucleus, anterior part",132,234,129,1.0,1.0,1.0
-334,"Basomedial amygdalar nucleus, posterior part",132,234,129,1.0,1.0,1.0
-780,Posterior amygdalar nucleus,151,236,147,1.0,1.0,1.0
-623,Cerebral nuclei,152,214,249,1.0,1.0,1.0
-477,Striatum,152,214,249,1.0,1.0,1.0
-485,Striatum dorsal region,152,214,249,1.0,1.0,1.0
-672,Caudoputamen,152,214,249,1.0,1.0,1.0
-493,Striatum ventral region,128,205,248,1.0,1.0,1.0
-56,Nucleus accumbens,128,205,248,1.0,1.0,1.0
-998,Fundus of striatum,128,205,248,1.0,1.0,1.0
-754,Olfactory tubercle,128,205,248,1.0,1.0,1.0
-481,Islands of Calleja,128,205,248,1.0,1.0,1.0
-489,Major island of Calleja,128,205,248,1.0,1.0,1.0
-144,"Olfactory tubercle, layers 1-3",128,205,248,1.0,1.0,1.0
-458,"Olfactory tubercle, molecular layer",128,205,248,1.0,1.0,1.0
-465,"Olfactory tubercle, pyramidal layer",128,205,248,1.0,1.0,1.0
-473,"Olfactory tubercle, polymorph layer",128,205,248,1.0,1.0,1.0
-275,Lateral septal complex,144,203,237,1.0,1.0,1.0
-242,Lateral septal nucleus,144,203,237,1.0,1.0,1.0
-250,"Lateral septal nucleus, caudal (caudodorsal) part",144,203,237,1.0,1.0,1.0
-258,"Lateral septal nucleus, rostral (rostroventral) part",144,203,237,1.0,1.0,1.0
-266,"Lateral septal nucleus, ventral part",144,203,237,1.0,1.0,1.0
-310,Septofimbrial nucleus,144,203,237,1.0,1.0,1.0
-333,Septohippocampal nucleus,144,203,237,1.0,1.0,1.0
-278,Striatum-like amygdalar nuclei,128,192,226,1.0,1.0,1.0
-23,Anterior amygdalar area,128,192,226,1.0,1.0,1.0
-292,Bed nucleus of the accessory olfactory tract,128,192,226,1.0,1.0,1.0
-536,Central amygdalar nucleus,128,192,226,1.0,1.0,1.0
-544,"Central amygdalar nucleus, capsular part",128,192,226,1.0,1.0,1.0
-551,"Central amygdalar nucleus, lateral part",128,192,226,1.0,1.0,1.0
-559,"Central amygdalar nucleus, medial part",128,192,226,1.0,1.0,1.0
-1105,Intercalated amygdalar nucleus,128,192,226,1.0,1.0,1.0
-403,Medial amygdalar nucleus,128,192,226,1.0,1.0,1.0
-411,"Medial amygdalar nucleus, anterodorsal part",128,192,226,1.0,1.0,1.0
-418,"Medial amygdalar nucleus, anteroventral part",128,192,226,1.0,1.0,1.0
-426,"Medial amygdalar nucleus, posterodorsal part",128,192,226,1.0,1.0,1.0
-472,"Medial amygdalar nucleus, posterodorsal part, sublayer a",128,192,226,1.0,1.0,1.0
-480,"Medial amygdalar nucleus, posterodorsal part, sublayer b",128,192,226,1.0,1.0,1.0
-487,"Medial amygdalar nucleus, posterodorsal part, sublayer c",128,192,226,1.0,1.0,1.0
-435,"Medial amygdalar nucleus, posteroventral part",128,192,226,1.0,1.0,1.0
-803,Pallidum,133,153,204,1.0,1.0,1.0
-818,"Pallidum, dorsal region",133,153,204,1.0,1.0,1.0
-1022,"Globus pallidus, external segment",133,153,204,1.0,1.0,1.0
-1031,"Globus pallidus, internal segment",133,153,204,1.0,1.0,1.0
-835,"Pallidum, ventral region",162,177,216,1.0,1.0,1.0
-342,Substantia innominata,162,177,216,1.0,1.0,1.0
-298,Magnocellular nucleus,162,177,216,1.0,1.0,1.0
-826,"Pallidum, medial region",150,167,211,1.0,1.0,1.0
-904,Medial septal complex,150,167,211,1.0,1.0,1.0
-564,Medial septal nucleus,150,167,211,1.0,1.0,1.0
-596,Diagonal band nucleus,150,167,211,1.0,1.0,1.0
-581,Triangular nucleus of septum,150,167,211,1.0,1.0,1.0
-809,"Pallidum, caudal region",179,192,223,1.0,1.0,1.0
-351,Bed nuclei of the stria terminalis,179,192,223,1.0,1.0,1.0
-359,"Bed nuclei of the stria terminalis, anterior division",179,192,223,1.0,1.0,1.0
-537,"Bed nuclei of the stria terminalis, anterior division, anterolateral area",179,192,223,1.0,1.0,1.0
-498,"Bed nuclei of the stria terminalis, anterior division, anteromedial area",179,192,223,1.0,1.0,1.0
-505,"Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus",179,192,223,1.0,1.0,1.0
-513,"Bed nuclei of the stria terminalis, anterior division, fusiform nucleus",179,192,223,1.0,1.0,1.0
-546,"Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus",179,192,223,1.0,1.0,1.0
-521,"Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus",179,192,223,1.0,1.0,1.0
-554,"Bed nuclei of the stria terminalis, anterior division, oval nucleus",179,192,223,1.0,1.0,1.0
-562,"Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus",179,192,223,1.0,1.0,1.0
-529,"Bed nuclei of the stria terminalis, anterior division, ventral nucleus",179,192,223,1.0,1.0,1.0
-367,"Bed nuclei of the stria terminalis, posterior division",179,192,223,1.0,1.0,1.0
-569,"Bed nuclei of the stria terminalis, posterior division, dorsal nucleus",179,192,223,1.0,1.0,1.0
-578,"Bed nuclei of the stria terminalis, posterior division, principal nucleus",179,192,223,1.0,1.0,1.0
-585,"Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus",179,192,223,1.0,1.0,1.0
-594,"Bed nuclei of the stria terminalis, posterior division, transverse nucleus",179,192,223,1.0,1.0,1.0
-602,"Bed nuclei of the stria terminalis, posterior division, strial extension",179,192,223,1.0,1.0,1.0
-287,Bed nucleus of the anterior commissure,179,192,223,1.0,1.0,1.0
-343,Brain stem,255,112,128,1.0,1.0,1.0
-1129,Interbrain,255,112,128,1.0,1.0,1.0
-549,Thalamus,255,112,128,1.0,1.0,1.0
-864,"Thalamus, sensory-motor cortex related",255,128,132,1.0,1.0,1.0
-637,Ventral group of the dorsal thalamus,255,128,132,1.0,1.0,1.0
-629,Ventral anterior-lateral complex of the thalamus,255,128,132,1.0,1.0,1.0
-685,Ventral medial nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-709,Ventral posterior complex of the thalamus,255,128,132,1.0,1.0,1.0
-718,Ventral posterolateral nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-725,"Ventral posterolateral nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0
-733,Ventral posteromedial nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-741,"Ventral posteromedial nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0
-406,Subparafascicular nucleus,255,128,132,1.0,1.0,1.0
-414,"Subparafascicular nucleus, magnocellular part",255,128,132,1.0,1.0,1.0
-422,"Subparafascicular nucleus, parvicellular part",255,128,132,1.0,1.0,1.0
-609,Subparafascicular area,255,128,132,1.0,1.0,1.0
-1044,Peripeduncular nucleus,255,128,132,1.0,1.0,1.0
-1008,"Geniculate group, dorsal thalamus",255,128,132,1.0,1.0,1.0
-475,Medial geniculate complex,255,128,132,1.0,1.0,1.0
-1072,"Medial geniculate complex, dorsal part",255,128,132,1.0,1.0,1.0
-1079,"Medial geniculate complex, ventral part",255,128,132,1.0,1.0,1.0
-1088,"Medial geniculate complex, medial part",255,128,132,1.0,1.0,1.0
-170,Dorsal part of the lateral geniculate complex,255,128,132,1.0,1.0,1.0
-496345664,"Dorsal part of the lateral geniculate complex, shell",255,128,132,1.0,1.0,1.0
-496345668,"Dorsal part of the lateral geniculate complex, core",255,128,132,1.0,1.0,1.0
-496345672,"Dorsal part of the lateral geniculate complex, ipsilateral zone",255,128,132,1.0,1.0,1.0
-856,"Thalamus, polymodal association cortex related",255,144,159,1.0,1.0,1.0
-138,Lateral group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-218,Lateral posterior nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1020,Posterior complex of the thalamus,255,144,159,1.0,1.0,1.0
-1029,Posterior limiting nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-325,Suprageniculate nucleus,255,144,159,1.0,1.0,1.0
-239,Anterior group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-255,Anteroventral nucleus of thalamus,255,144,159,1.0,1.0,1.0
-127,Anteromedial nucleus,255,144,159,1.0,1.0,1.0
-1096,"Anteromedial nucleus, dorsal part",255,144,159,1.0,1.0,1.0
-1104,"Anteromedial nucleus, ventral part",255,144,159,1.0,1.0,1.0
-64,Anterodorsal nucleus,255,144,159,1.0,1.0,1.0
-1120,Interanteromedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1113,Interanterodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-155,Lateral dorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0
-444,Medial group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-59,Intermediodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-362,Mediodorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0
-617,"Mediodorsal nucleus of the thalamus, central part",255,144,159,1.0,1.0,1.0
-626,"Mediodorsal nucleus of the thalamus, lateral part",255,144,159,1.0,1.0,1.0
-636,"Mediodorsal nucleus of the thalamus, medial part",255,144,159,1.0,1.0,1.0
-366,Submedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1077,Perireunensis nucleus,255,144,159,1.0,1.0,1.0
-571,Midline group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-149,Paraventricular nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-15,Parataenial nucleus,255,144,159,1.0,1.0,1.0
-181,Nucleus of reunions,255,144,159,1.0,1.0,1.0
-51,Intralaminar nuclei of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-189,Rhomboid nucleus,255,144,159,1.0,1.0,1.0
-599,Central medial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-907,Paracentral nucleus,255,144,159,1.0,1.0,1.0
-575,Central lateral nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-930,Parafascicular nucleus,255,144,159,1.0,1.0,1.0
-262,Reticular nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1014,"Geniculate group, ventral thalamus",255,144,159,1.0,1.0,1.0
-27,Intergeniculate leaflet of the lateral geniculate complex,255,144,159,1.0,1.0,1.0
-178,Ventral part of the lateral geniculate complex,255,144,159,1.0,1.0,1.0
-300,"Ventral part of the lateral geniculate complex, lateral zone",255,144,159,1.0,1.0,1.0
-316,"Ventral part of the lateral geniculate complex, medial zone",255,144,159,1.0,1.0,1.0
-321,Subgeniculate nucleus,255,144,159,1.0,1.0,1.0
-958,Epithalamus,255,144,159,1.0,1.0,1.0
-483,Medial habenula,255,144,159,1.0,1.0,1.0
-186,Lateral habenula,255,144,159,1.0,1.0,1.0
-953,Pineal body,255,144,159,1.0,1.0,1.0
-1097,Hypothalamus,230,68,56,1.0,1.0,1.0
-157,Periventricular zone,255,93,80,1.0,1.0,1.0
-390,Supraoptic nucleus,255,93,80,1.0,1.0,1.0
-332,Accessory supraoptic group,255,93,80,1.0,1.0,1.0
-432,Nucleus circularis,255,93,80,1.0,1.0,1.0
-38,Paraventricular hypothalamic nucleus,255,93,80,1.0,1.0,1.0
-71,"Paraventricular hypothalamic nucleus, magnocellular division",255,93,80,1.0,1.0,1.0
-47,"Paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part",255,93,80,1.0,1.0,1.0
-79,"Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part",255,93,80,1.0,1.0,1.0
-103,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part",255,93,80,1.0,1.0,1.0
-652,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone",255,93,80,1.0,1.0,1.0
-660,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, medial zone",255,93,80,1.0,1.0,1.0
-94,"Paraventricular hypothalamic nucleus, parvicellular division",255,93,80,1.0,1.0,1.0
-55,"Paraventricular hypothalamic nucleus, parvicellular division, anterior parvicellular part",255,93,80,1.0,1.0,1.0
-87,"Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone",255,93,80,1.0,1.0,1.0
-110,"Paraventricular hypothalamic nucleus, parvicellular division, periventricular part",255,93,80,1.0,1.0,1.0
-30,"Periventricular hypothalamic nucleus, anterior part",255,93,80,1.0,1.0,1.0
-118,"Periventricular hypothalamic nucleus, intermediate part",255,93,80,1.0,1.0,1.0
-223,Arcuate hypothalamic nucleus,255,93,80,1.0,1.0,1.0
-141,Periventricular region,255,85,71,1.0,1.0,1.0
-72,Anterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0
-80,Anterior hypothalamic area,255,85,71,1.0,1.0,1.0
-263,Anteroventral preoptic nucleus,255,85,71,1.0,1.0,1.0
-272,Anteroventral periventricular nucleus,255,85,71,1.0,1.0,1.0
-830,Dorsomedial nucleus of the hypothalamus,255,85,71,1.0,1.0,1.0
-668,"Dorsomedial nucleus of the hypothalamus, anterior part",255,85,71,1.0,1.0,1.0
-676,"Dorsomedial nucleus of the hypothalamus, posterior part",255,85,71,1.0,1.0,1.0
-684,"Dorsomedial nucleus of the hypothalamus, ventral part",255,85,71,1.0,1.0,1.0
-452,Median preoptic nucleus,255,85,71,1.0,1.0,1.0
-523,Medial preoptic area,255,85,71,1.0,1.0,1.0
-763,Vascular organ of the lamina terminalis,255,85,71,1.0,1.0,1.0
-914,Posterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0
-1109,Parastrial nucleus,255,85,71,1.0,1.0,1.0
-1124,Suprachiasmatic preoptic nucleus,255,85,71,1.0,1.0,1.0
-126,"Periventricular hypothalamic nucleus, posterior part",255,85,71,1.0,1.0,1.0
-133,"Periventricular hypothalamic nucleus, preoptic part",255,85,71,1.0,1.0,1.0
-347,Subparaventricular zone,255,85,71,1.0,1.0,1.0
-286,Suprachiasmatic nucleus,255,85,71,1.0,1.0,1.0
-338,Subfornical organ,255,85,71,1.0,1.0,1.0
-689,Ventrolateral preoptic nucleus,255,85,71,1.0,1.0,1.0
-467,Hypothalamic medial zone,255,76,62,1.0,1.0,1.0
-88,Anterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-700,"Anterior hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0
-708,"Anterior hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0
-716,"Anterior hypothalamic nucleus, dorsal part",255,76,62,1.0,1.0,1.0
-724,"Anterior hypothalamic nucleus, posterior part",255,76,62,1.0,1.0,1.0
-331,Mammillary body,255,76,62,1.0,1.0,1.0
-210,Lateral mammillary nucleus,255,76,62,1.0,1.0,1.0
-491,Medial mammillary nucleus,255,76,62,1.0,1.0,1.0
-732,"Medial mammillary nucleus, median part",255,76,62,1.0,1.0,1.0
-525,Supramammillary nucleus,255,76,62,1.0,1.0,1.0
-1110,"Supramammillary nucleus, lateral part",255,76,62,1.0,1.0,1.0
-1118,"Supramammillary nucleus, medial part",255,76,62,1.0,1.0,1.0
-557,Tuberomammillary nucleus,255,76,62,1.0,1.0,1.0
-1126,"Tuberomammillary nucleus, dorsal part",255,76,62,1.0,1.0,1.0
-1,"Tuberomammillary nucleus, ventral part",255,76,62,1.0,1.0,1.0
-515,Medial preoptic nucleus,255,76,62,1.0,1.0,1.0
-740,"Medial preoptic nucleus, central part",255,76,62,1.0,1.0,1.0
-748,"Medial preoptic nucleus, lateral part",255,76,62,1.0,1.0,1.0
-756,"Medial preoptic nucleus, medial part",255,76,62,1.0,1.0,1.0
-980,Dorsal premammillary nucleus,255,76,62,1.0,1.0,1.0
-1004,Ventral premammillary nucleus,255,76,62,1.0,1.0,1.0
-63,"Paraventricular hypothalamic nucleus, descending division",255,76,62,1.0,1.0,1.0
-439,"Paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part",255,76,62,1.0,1.0,1.0
-447,"Paraventricular hypothalamic nucleus, descending division, forniceal part",255,76,62,1.0,1.0,1.0
-455,"Paraventricular hypothalamic nucleus, descending division, lateral parvicellular part",255,76,62,1.0,1.0,1.0
-464,"Paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone",255,76,62,1.0,1.0,1.0
-693,Ventromedial hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-761,"Ventromedial hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0
-769,"Ventromedial hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0
-777,"Ventromedial hypothalamic nucleus, dorsomedial part",255,76,62,1.0,1.0,1.0
-785,"Ventromedial hypothalamic nucleus, ventrolateral part",255,76,62,1.0,1.0,1.0
-946,Posterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-290,Hypothalamic lateral zone,242,72,59,1.0,1.0,1.0
-194,Lateral hypothalamic area,242,72,59,1.0,1.0,1.0
-226,Lateral preoptic area,242,72,59,1.0,1.0,1.0
-356,Preparasubthalamic nucleus,242,72,59,1.0,1.0,1.0
-364,Parasubthalamic nucleus,242,72,59,1.0,1.0,1.0
-173,Retrochiasmatic area,242,72,59,1.0,1.0,1.0
-470,Subthalamic nucleus,242,72,59,1.0,1.0,1.0
-614,Tuberal nucleus,242,72,59,1.0,1.0,1.0
-797,Zona incerta,242,72,59,1.0,1.0,1.0
-796,Dopaminergic A13 group,242,72,59,1.0,1.0,1.0
-804,Fields of Forel,242,72,59,1.0,1.0,1.0
-10671,Median eminence,242,72,59,1.0,1.0,1.0
-313,Midbrain,255,100,255,1.0,1.0,1.0
-339,"Midbrain, sensory related",255,122,255,1.0,1.0,1.0
-302,"Superior colliculus, sensory related",255,122,255,1.0,1.0,1.0
-851,"Superior colliculus, optic layer",255,122,255,1.0,1.0,1.0
-842,"Superior colliculus, superficial gray layer",255,122,255,1.0,1.0,1.0
-834,"Superior colliculus, zonal layer",255,122,255,1.0,1.0,1.0
-4,Inferior colliculus,255,122,255,1.0,1.0,1.0
-811,"Inferior colliculus, central nucleus",255,122,255,1.0,1.0,1.0
-820,"Inferior colliculus, dorsal nucleus",255,122,255,1.0,1.0,1.0
-828,"Inferior colliculus, external nucleus",255,122,255,1.0,1.0,1.0
-580,Nucleus of the brachium of the inferior colliculus,255,122,255,1.0,1.0,1.0
-271,Nucleus sagulum,255,122,255,1.0,1.0,1.0
-874,Parabigeminal nucleus,255,122,255,1.0,1.0,1.0
-460,Midbrain trigeminal nucleus,255,122,255,1.0,1.0,1.0
-323,"Midbrain, motor related",255,144,255,1.0,1.0,1.0
-381,"Substantia nigra, reticular part",255,144,255,1.0,1.0,1.0
-749,Ventral tegmental area,255,144,255,1.0,1.0,1.0
-246,"Midbrain reticular nucleus, retrorubral area",255,144,255,1.0,1.0,1.0
-128,Midbrain reticular nucleus,255,144,255,1.0,1.0,1.0
-539,"Midbrain reticular nucleus, magnocellular part",255,144,255,1.0,1.0,1.0
-548,"Midbrain reticular nucleus, magnocellular part, general",255,144,255,1.0,1.0,1.0
-555,"Midbrain reticular nucleus, parvicellular part",255,144,255,1.0,1.0,1.0
-294,"Superior colliculus, motor related",255,144,255,1.0,1.0,1.0
-26,"Superior colliculus, motor related, deep gray layer",255,144,255,1.0,1.0,1.0
-42,"Superior colliculus, motor related, deep white layer",255,144,255,1.0,1.0,1.0
-17,"Superior colliculus, motor related, intermediate white layer",255,144,255,1.0,1.0,1.0
-10,"Superior colliculus, motor related, intermediate gray layer",255,144,255,1.0,1.0,1.0
-494,"Superior colliculus, motor related, intermediate gray layer, sublayer a",255,144,255,1.0,1.0,1.0
-503,"Superior colliculus, motor related, intermediate gray layer, sublayer b",255,144,255,1.0,1.0,1.0
-511,"Superior colliculus, motor related, intermediate gray layer, sublayer c",255,144,255,1.0,1.0,1.0
-795,Periaqueductal gray,255,144,255,1.0,1.0,1.0
-50,Precommissural nucleus,255,144,255,1.0,1.0,1.0
-67,Interstitial nucleus of Cajal,255,144,255,1.0,1.0,1.0
-587,Nucleus of Darkschewitsch,255,144,255,1.0,1.0,1.0
-1100,Pretectal region,255,144,255,1.0,1.0,1.0
-215,Anterior pretectal nucleus,255,144,255,1.0,1.0,1.0
-531,Medial pretectal area,255,144,255,1.0,1.0,1.0
-628,Nucleus of the optic tract,255,144,255,1.0,1.0,1.0
-634,Nucleus of the posterior commissure,255,144,255,1.0,1.0,1.0
-706,Olivary pretectal nucleus,255,144,255,1.0,1.0,1.0
-1061,Posterior pretectal nucleus,255,144,255,1.0,1.0,1.0
-616,Cuneiform nucleus,255,144,255,1.0,1.0,1.0
-214,Red nucleus,255,144,255,1.0,1.0,1.0
-35,Oculomotor nucleus,255,144,255,1.0,1.0,1.0
-975,Edinger-Westphal nucleus,255,144,255,1.0,1.0,1.0
-115,Trochlear nucleus,255,144,255,1.0,1.0,1.0
-757,Ventral tegmental nucleus,255,144,255,1.0,1.0,1.0
-231,Anterior tegmental nucleus,255,144,255,1.0,1.0,1.0
-66,Lateral terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-75,Dorsal terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-58,Medial terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-615,"Substantia nigra, lateral part",255,144,255,1.0,1.0,1.0
-348,"Midbrain, behavioral state related",255,144,255,1.0,1.0,1.0
-374,"Substantia nigra, compact part",255,166,255,1.0,1.0,1.0
-1052,Pedunculopontine nucleus,255,166,255,1.0,1.0,1.0
-165,Midbrain raphe nuclei,255,166,255,1.0,1.0,1.0
-12,Interfascicular nucleus raphe,255,166,255,1.0,1.0,1.0
-100,Interpeduncular nucleus,255,166,255,1.0,1.0,1.0
-197,Rostral linear nucleus raphe,255,166,255,1.0,1.0,1.0
-591,Central linear nucleus raphe,255,166,255,1.0,1.0,1.0
-872,Dorsal nucleus raphe,255,166,255,1.0,1.0,1.0
-1065,Hindbrain,255,155,136,1.0,1.0,1.0
-771,Pons,255,155,136,1.0,1.0,1.0
-1132,"Pons, sensory related",255,174,111,1.0,1.0,1.0
-612,Nucleus of the lateral lemniscus,255,174,111,1.0,1.0,1.0
-82,"Nucleus of the lateral lemniscus, dorsal part",255,174,111,1.0,1.0,1.0
-90,"Nucleus of the lateral lemniscus, horizontal part",255,174,111,1.0,1.0,1.0
-99,"Nucleus of the lateral lemniscus, ventral part",255,174,111,1.0,1.0,1.0
-7,Principal sensory nucleus of the trigeminal,255,174,111,1.0,1.0,1.0
-867,Parabrachial nucleus,255,174,111,1.0,1.0,1.0
-123,Koelliker-Fuse subnucleus,255,174,111,1.0,1.0,1.0
-881,"Parabrachial nucleus, lateral division",255,174,111,1.0,1.0,1.0
-860,"Parabrachial nucleus, lateral division, central lateral part",255,174,111,1.0,1.0,1.0
-868,"Parabrachial nucleus, lateral division, dorsal lateral part",255,174,111,1.0,1.0,1.0
-875,"Parabrachial nucleus, lateral division, external lateral part",255,174,111,1.0,1.0,1.0
-883,"Parabrachial nucleus, lateral division, superior lateral part",255,174,111,1.0,1.0,1.0
-891,"Parabrachial nucleus, lateral division, ventral lateral part",255,174,111,1.0,1.0,1.0
-890,"Parabrachial nucleus, medial division",255,174,111,1.0,1.0,1.0
-899,"Parabrachial nucleus, medial division, external medial part",255,174,111,1.0,1.0,1.0
-915,"Parabrachial nucleus, medial division, medial medial part",255,174,111,1.0,1.0,1.0
-923,"Parabrachial nucleus, medial division, ventral medial part",255,174,111,1.0,1.0,1.0
-398,Superior olivary complex,255,174,111,1.0,1.0,1.0
-122,"Superior olivary complex, periolivary region",255,174,111,1.0,1.0,1.0
-105,"Superior olivary complex, medial part",255,174,111,1.0,1.0,1.0
-114,"Superior olivary complex, lateral part",255,174,111,1.0,1.0,1.0
-987,"Pons, motor related",255,186,134,1.0,1.0,1.0
-280,Barrington's nucleus,255,186,134,1.0,1.0,1.0
-880,Dorsal tegmental nucleus,255,186,134,1.0,1.0,1.0
-283,Lateral tegmental nucleus,255,186,134,1.0,1.0,1.0
-898,Pontine central gray,255,186,134,1.0,1.0,1.0
-931,Pontine gray,255,186,134,1.0,1.0,1.0
-1093,"Pontine reticular nucleus, caudal part",255,186,134,1.0,1.0,1.0
-552,"Pontine reticular nucleus, ventral part",255,186,134,1.0,1.0,1.0
-318,Supragenual nucleus,255,186,134,1.0,1.0,1.0
-462,Superior salivatory nucleus,255,186,134,1.0,1.0,1.0
-534,Supratrigeminal nucleus,255,186,134,1.0,1.0,1.0
-574,Tegmental reticular nucleus,255,186,134,1.0,1.0,1.0
-621,Motor nucleus of trigeminal,255,186,134,1.0,1.0,1.0
-1117,"Pons, behavioral state related",255,195,149,1.0,1.0,1.0
-679,Superior central nucleus raphe,255,195,149,1.0,1.0,1.0
-137,"Superior central nucleus raphe, lateral part",255,195,149,1.0,1.0,1.0
-130,"Superior central nucleus raphe, medial part",255,195,149,1.0,1.0,1.0
-147,Locus ceruleus,255,195,149,1.0,1.0,1.0
-162,Laterodorsal tegmental nucleus,255,195,149,1.0,1.0,1.0
-604,Nucleus incertus,255,195,149,1.0,1.0,1.0
-146,Pontine reticular nucleus,255,195,149,1.0,1.0,1.0
-238,Nucleus raphe pontis,255,195,149,1.0,1.0,1.0
-350,Subceruleus nucleus,255,195,149,1.0,1.0,1.0
-358,Sublaterodorsal nucleus,255,195,149,1.0,1.0,1.0
-354,Medulla,255,155,205,1.0,1.0,1.0
-386,"Medulla, sensory related",255,165,210,1.0,1.0,1.0
-207,Area postrema,255,165,210,1.0,1.0,1.0
-607,Cochlear nuclei,255,165,210,1.0,1.0,1.0
-112,Granular lamina of the cochlear nuclei,255,165,210,1.0,1.0,1.0
-560,"Cochlear nucleus, subpedunclular granular region",255,165,210,1.0,1.0,1.0
-96,Dorsal cochlear nucleus,255,165,210,1.0,1.0,1.0
-101,Ventral cochlear nucleus,255,165,210,1.0,1.0,1.0
-720,Dorsal column nuclei,255,165,210,1.0,1.0,1.0
-711,Cuneate nucleus,255,165,210,1.0,1.0,1.0
-1039,Gracile nucleus,255,165,210,1.0,1.0,1.0
-903,External cuneate nucleus,255,165,210,1.0,1.0,1.0
-642,Nucleus of the trapezoid body,255,165,210,1.0,1.0,1.0
-651,Nucleus of the solitary tract,255,165,210,1.0,1.0,1.0
-659,"Nucleus of the solitary tract, central part",255,165,210,1.0,1.0,1.0
-666,"Nucleus of the solitary tract, commissural part",255,165,210,1.0,1.0,1.0
-674,"Nucleus of the solitary tract, gelatinous part",255,165,210,1.0,1.0,1.0
-682,"Nucleus of the solitary tract, lateral part",255,165,210,1.0,1.0,1.0
-691,"Nucleus of the solitary tract, medial part",255,165,210,1.0,1.0,1.0
-429,"Spinal nucleus of the trigeminal, caudal part",255,165,210,1.0,1.0,1.0
-437,"Spinal nucleus of the trigeminal, interpolar part",255,165,210,1.0,1.0,1.0
-445,"Spinal nucleus of the trigeminal, oral part",255,165,210,1.0,1.0,1.0
-77,"Spinal nucleus of the trigeminal, oral part, caudal dorsomedial part",255,165,210,1.0,1.0,1.0
-53,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, dorsal zone",255,165,210,1.0,1.0,1.0
-61,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone",255,165,210,1.0,1.0,1.0
-45,"Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part",255,165,210,1.0,1.0,1.0
-69,"Spinal nucleus of the trigeminal, oral part, ventrolateral part",255,165,210,1.0,1.0,1.0
-789,Nucleus z,255,165,210,1.0,1.0,1.0
-370,"Medulla, motor related",255,179,217,1.0,1.0,1.0
-653,Abducens nucleus,255,179,217,1.0,1.0,1.0
-568,Accessory abducens nucleus,255,179,217,1.0,1.0,1.0
-661,Facial motor nucleus,255,179,217,1.0,1.0,1.0
-576,Accessory facial motor nucleus,255,179,217,1.0,1.0,1.0
-640,Efferent vestibular nucleus,255,179,217,1.0,1.0,1.0
-135,Nucleus ambiguus,255,179,217,1.0,1.0,1.0
-939,"Nucleus ambiguus, dorsal division",255,179,217,1.0,1.0,1.0
-143,"Nucleus ambiguus, ventral division",255,179,217,1.0,1.0,1.0
-839,Dorsal motor nucleus of the vagus nerve,255,179,217,1.0,1.0,1.0
-887,Efferent cochlear group,255,179,217,1.0,1.0,1.0
-1048,Gigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-372,Infracerebellar nucleus,255,179,217,1.0,1.0,1.0
-83,Inferior olivary complex,255,179,217,1.0,1.0,1.0
-136,Intermediate reticular nucleus,255,179,217,1.0,1.0,1.0
-106,Inferior salivatory nucleus,255,179,217,1.0,1.0,1.0
-203,Linear nucleus of the medulla,255,179,217,1.0,1.0,1.0
-235,Lateral reticular nucleus,255,179,217,1.0,1.0,1.0
-955,"Lateral reticular nucleus, magnocellular part",255,179,217,1.0,1.0,1.0
-963,"Lateral reticular nucleus, parvicellular part",255,179,217,1.0,1.0,1.0
-307,Magnocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-395,Medullary reticular nucleus,255,179,217,1.0,1.0,1.0
-1098,"Medullary reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0
-1107,"Medullary reticular nucleus, ventral part",255,179,217,1.0,1.0,1.0
-852,Parvicellular reticular nucleus,255,179,217,1.0,1.0,1.0
-859,Parasolitary nucleus,255,179,217,1.0,1.0,1.0
-938,Paragigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-970,"Paragigantocellular reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0
-978,"Paragigantocellular reticular nucleus, lateral part",255,179,217,1.0,1.0,1.0
-154,Perihypoglossal nuclei,255,179,217,1.0,1.0,1.0
-161,Nucleus intercalatus,255,179,217,1.0,1.0,1.0
-177,Nucleus of Roller,255,179,217,1.0,1.0,1.0
-169,Nucleus prepositus,255,179,217,1.0,1.0,1.0
-995,Paramedian reticular nucleus,255,179,217,1.0,1.0,1.0
-1069,Parapyramidal nucleus,255,179,217,1.0,1.0,1.0
-185,"Parapyramidal nucleus, deep part",255,179,217,1.0,1.0,1.0
-193,"Parapyramidal nucleus, superficial part",255,179,217,1.0,1.0,1.0
-701,Vestibular nuclei,255,179,217,1.0,1.0,1.0
-209,Lateral vestibular nucleus,255,179,217,1.0,1.0,1.0
-202,Medial vestibular nucleus,255,179,217,1.0,1.0,1.0
-225,Spinal vestibular nucleus,255,179,217,1.0,1.0,1.0
-217,Superior vestibular nucleus,255,179,217,1.0,1.0,1.0
-765,Nucleus x,255,179,217,1.0,1.0,1.0
-773,Hypoglossal nucleus,255,179,217,1.0,1.0,1.0
-781,Nucleus y,255,179,217,1.0,1.0,1.0
-76,Interstitial nucleus of the vestibular nerve,255,179,217,1.0,1.0,1.0
-379,"Medulla, behavioral state related",255,198,226,1.0,1.0,1.0
-206,Nucleus raphe magnus,255,198,226,1.0,1.0,1.0
-230,Nucleus raphe pallidus,255,198,226,1.0,1.0,1.0
-222,Nucleus raphe obscurus,255,198,226,1.0,1.0,1.0
-512,Cerebellum,240,240,128,1.0,1.0,1.0
-528,Cerebellar cortex,240,240,128,1.0,1.0,1.0
-645,Vermal regions,255,252,145,1.0,1.0,1.0
-912,Lingula (I),255,252,145,1.0,1.0,1.0
-10707,"Lingula (I), molecular layer",255,252,145,1.0,1.0,1.0
-10706,"Lingula (I), Purkinje layer",255,252,145,1.0,1.0,1.0
-10705,"Lingula (I), granular layer",236,231,84,1.0,1.0,1.0
-920,Central lobule,255,252,145,1.0,1.0,1.0
-976,Lobule II,255,252,145,1.0,1.0,1.0
-10710,"Lobule II, molecular layer",255,252,145,1.0,1.0,1.0
-10709,"Lobule II, Purkinje layer",255,252,145,1.0,1.0,1.0
-10708,"Lobule II, granular layer",236,231,84,1.0,1.0,1.0
-984,Lobule III,255,252,145,1.0,1.0,1.0
-10713,"Lobule III, molecular layer",255,252,145,1.0,1.0,1.0
-10712,"Lobule III, Purkinje layer",255,252,145,1.0,1.0,1.0
-10711,"Lobule III, granular layer",236,231,84,1.0,1.0,1.0
-928,Culmen,255,252,145,1.0,1.0,1.0
-992,Lobule IV,255,252,145,1.0,1.0,1.0
-10716,"Lobule IV, molecular layer",255,252,145,1.0,1.0,1.0
-10715,"Lobule IV, Purkinje layer",255,252,145,1.0,1.0,1.0
-10714,"Lobule IV, granular layer",236,231,84,1.0,1.0,1.0
-1001,Lobule V,255,252,145,1.0,1.0,1.0
-10719,"Lobule V, molecular layer",255,252,145,1.0,1.0,1.0
-10718,"Lobule V, Purkinje layer",255,252,145,1.0,1.0,1.0
-10717,"Lobule V, granular layer",236,231,84,1.0,1.0,1.0
-1091,Lobules IV-V,255,252,145,1.0,1.0,1.0
-10722,"Lobules IV-V, molecular layer",255,252,145,1.0,1.0,1.0
-10721,"Lobules IV-V, Purkinje layer",255,252,145,1.0,1.0,1.0
-10720,"Lobules IV-V, granular layer",236,231,84,1.0,1.0,1.0
-936,Declive (VI),255,252,145,1.0,1.0,1.0
-10725,"Declive (VI), molecular layer",255,252,145,1.0,1.0,1.0
-10724,"Declive (VI), Purkinje layer",255,252,145,1.0,1.0,1.0
-10723,"Declive (VI), granular layer",236,231,84,1.0,1.0,1.0
-944,Folium-tuber vermis (VII),255,252,145,1.0,1.0,1.0
-10728,"Folium-tuber vermis (VII), molecular layer",255,252,145,1.0,1.0,1.0
-10727,"Folium-tuber vermis (VII), Purkinje layer",255,252,145,1.0,1.0,1.0
-10726,"Folium-tuber vermis (VII), granular layer",236,231,84,1.0,1.0,1.0
-951,Pyramus (VIII),255,252,145,1.0,1.0,1.0
-10731,"Pyramus (VIII), molecular layer",255,252,145,1.0,1.0,1.0
-10730,"Pyramus (VIII), Purkinje layer",255,252,145,1.0,1.0,1.0
-10729,"Pyramus (VIII), granular layer",236,231,84,1.0,1.0,1.0
-957,Uvula (IX),255,252,145,1.0,1.0,1.0
-10734,"Uvula (IX), molecular layer",255,252,145,1.0,1.0,1.0
-10733,"Uvula (IX), Purkinje layer",255,252,145,1.0,1.0,1.0
-10732,"Uvula (IX), granular layer",236,231,84,1.0,1.0,1.0
-968,Nodulus (X),255,252,145,1.0,1.0,1.0
-10737,"Nodulus (X), molecular layer",255,252,145,1.0,1.0,1.0
-10736,"Nodulus (X), Purkinje layer",255,252,145,1.0,1.0,1.0
-10735,"Nodulus (X), granular layer",236,231,84,1.0,1.0,1.0
-1073,Hemispheric regions,255,252,145,1.0,1.0,1.0
-1007,Simple lobule,255,252,145,1.0,1.0,1.0
-10674,"Simple lobule, molecular layer",255,252,145,1.0,1.0,1.0
-10673,"Simple lobule, Purkinje layer",255,252,145,1.0,1.0,1.0
-10672,"Simple lobule, granular layer",236,231,84,1.0,1.0,1.0
-1017,Ansiform lobule,255,252,145,1.0,1.0,1.0
-1056,Crus 1,255,252,145,1.0,1.0,1.0
-10677,"Crus 1, molecular layer",255,252,145,1.0,1.0,1.0
-10676,"Crus 1, Purkinje layer",255,252,145,1.0,1.0,1.0
-10675,"Crus 1, granular layer",236,231,84,1.0,1.0,1.0
-1064,Crus 2,255,252,145,1.0,1.0,1.0
-10680,"Crus 2, molecular layer",255,252,145,1.0,1.0,1.0
-10679,"Crus 2, Purkinje layer",255,252,145,1.0,1.0,1.0
-10678,"Crus 2, granular layer",236,231,84,1.0,1.0,1.0
-1025,Paramedian lobule,255,252,145,1.0,1.0,1.0
-10683,"Paramedian lobule, molecular layer",255,252,145,1.0,1.0,1.0
-10682,"Paramedian lobule, Purkinje layer",255,252,145,1.0,1.0,1.0
-10681,"Paramedian lobule, granular layer",236,231,84,1.0,1.0,1.0
-1033,Copula pyramidis,255,252,145,1.0,1.0,1.0
-10686,"Copula pyramidis, molecular layer",255,252,145,1.0,1.0,1.0
-10685,"Copula pyramidis, Purkinje layer",255,252,145,1.0,1.0,1.0
-10684,"Copula pyramidis, granular layer",236,231,84,1.0,1.0,1.0
-1041,Paraflocculus,255,252,145,1.0,1.0,1.0
-10689,"Paraflocculus, molecular layer",255,252,145,1.0,1.0,1.0
-10688,"Paraflocculus, Purkinje layer",255,252,145,1.0,1.0,1.0
-10687,"Paraflocculus, granular layer",236,231,84,1.0,1.0,1.0
-1049,Flocculus,255,252,145,1.0,1.0,1.0
-10692,"Flocculus, molecular layer",255,252,145,1.0,1.0,1.0
-10691,"Flocculus, Purkinje layer",255,252,145,1.0,1.0,1.0
-10690,"Flocculus, granular layer",236,231,84,1.0,1.0,1.0
-1144,"Cerebellar cortex, molecular layer",255,252,145,1.0,1.0,1.0
-1145,"Cerebellar cortex, Purkinje layer",255,252,145,1.0,1.0,1.0
-1143,"Cerebellar cortex, granular layer",236,231,84,1.0,1.0,1.0
-519,Cerebellar nuclei,240,240,128,1.0,1.0,1.0
-989,Fastigial nucleus,255,253,188,1.0,1.0,1.0
-91,Interposed nucleus,255,253,188,1.0,1.0,1.0
-846,Dentate nucleus,255,253,188,1.0,1.0,1.0
-1009,fiber tracts,204,204,204,1.0,1.0,1.0
-967,cranial nerves,204,204,204,1.0,1.0,1.0
-885,terminal nerve,204,204,204,1.0,1.0,1.0
-949,vomeronasal nerve,204,204,204,1.0,1.0,1.0
-840,olfactory nerve,204,204,204,1.0,1.0,1.0
-1016,olfactory nerve layer of main olfactory bulb,204,204,204,1.0,1.0,1.0
-21,"lateral olfactory tract, general",204,204,204,1.0,1.0,1.0
-665,"lateral olfactory tract, body",204,204,204,1.0,1.0,1.0
-538,dorsal limb,204,204,204,1.0,1.0,1.0
-459,accessory olfactory tract,204,204,204,1.0,1.0,1.0
-900,"anterior commissure, olfactory limb",204,204,204,1.0,1.0,1.0
-848,optic nerve,204,204,204,1.0,1.0,1.0
-876,accessory optic tract,204,204,204,1.0,1.0,1.0
-916,brachium of the superior colliculus,204,204,204,1.0,1.0,1.0
-336,superior colliculus commissure,204,204,204,1.0,1.0,1.0
-117,optic chiasm,204,204,204,1.0,1.0,1.0
-125,optic tract,204,204,204,1.0,1.0,1.0
-357,tectothalamic pathway,204,204,204,1.0,1.0,1.0
-832,oculomotor nerve,204,204,204,1.0,1.0,1.0
-62,medial longitudinal fascicle,204,204,204,1.0,1.0,1.0
-158,posterior commissure,204,204,204,1.0,1.0,1.0
-911,trochlear nerve,204,204,204,1.0,1.0,1.0
-384,trochlear nerve decussation,204,204,204,1.0,1.0,1.0
-710,abducens nerve,204,204,204,1.0,1.0,1.0
-901,trigeminal nerve,204,204,204,1.0,1.0,1.0
-93,motor root of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-229,sensory root of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-705,midbrain tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-794,spinal tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-798,facial nerve,204,204,204,1.0,1.0,1.0
-1131,intermediate nerve,204,204,204,1.0,1.0,1.0
-1116,genu of the facial nerve,204,204,204,1.0,1.0,1.0
-933,vestibulocochlear nerve,204,204,204,1.0,1.0,1.0
-1076,efferent cochleovestibular bundle,204,204,204,1.0,1.0,1.0
-413,vestibular nerve,204,204,204,1.0,1.0,1.0
-948,cochlear nerve,204,204,204,1.0,1.0,1.0
-841,trapezoid body,204,204,204,1.0,1.0,1.0
-641,intermediate acoustic stria,204,204,204,1.0,1.0,1.0
-506,dorsal acoustic stria,204,204,204,1.0,1.0,1.0
-658,lateral lemniscus,204,204,204,1.0,1.0,1.0
-633,inferior colliculus commissure,204,204,204,1.0,1.0,1.0
-482,brachium of the inferior colliculus,204,204,204,1.0,1.0,1.0
-808,glossopharyngeal nerve,204,204,204,1.0,1.0,1.0
-917,vagus nerve,204,204,204,1.0,1.0,1.0
-237,solitary tract,204,204,204,1.0,1.0,1.0
-717,accessory spinal nerve,204,204,204,1.0,1.0,1.0
-813,hypoglossal nerve,204,204,204,1.0,1.0,1.0
-925,ventral roots,204,204,204,1.0,1.0,1.0
-792,dorsal roots,204,204,204,1.0,1.0,1.0
-932,cervicothalamic tract,204,204,204,1.0,1.0,1.0
-570,dorsolateral fascicle,204,204,204,1.0,1.0,1.0
-522,dorsal commissure of the spinal cord,204,204,204,1.0,1.0,1.0
-858,ventral commissure of the spinal cord,204,204,204,1.0,1.0,1.0
-586,fasciculus proprius,204,204,204,1.0,1.0,1.0
-514,dorsal column,204,204,204,1.0,1.0,1.0
-380,cuneate fascicle,204,204,204,1.0,1.0,1.0
-388,gracile fascicle,204,204,204,1.0,1.0,1.0
-396,internal arcuate fibers,204,204,204,1.0,1.0,1.0
-697,medial lemniscus,204,204,204,1.0,1.0,1.0
-871,spinothalamic tract,204,204,204,1.0,1.0,1.0
-29,lateral spinothalamic tract,204,204,204,1.0,1.0,1.0
-389,ventral spinothalamic tract,204,204,204,1.0,1.0,1.0
-245,spinocervical tract,204,204,204,1.0,1.0,1.0
-261,spino-olivary pathway,204,204,204,1.0,1.0,1.0
-270,spinoreticular pathway,204,204,204,1.0,1.0,1.0
-293,spinovestibular pathway,204,204,204,1.0,1.0,1.0
-277,spinotectal pathway,204,204,204,1.0,1.0,1.0
-253,spinohypothalamic pathway,204,204,204,1.0,1.0,1.0
-285,spinotelenchephalic pathway,204,204,204,1.0,1.0,1.0
-627,hypothalamohypophysial tract,204,204,204,1.0,1.0,1.0
-960,cerebellum related fiber tracts,204,204,204,1.0,1.0,1.0
-744,cerebellar commissure,204,204,204,1.0,1.0,1.0
-752,cerebellar peduncles,204,204,204,1.0,1.0,1.0
-326,superior cerebelar peduncles,204,204,204,1.0,1.0,1.0
-812,superior cerebellar peduncle decussation,204,204,204,1.0,1.0,1.0
-85,spinocerebellar tract,204,204,204,1.0,1.0,1.0
-850,uncinate fascicle,204,204,204,1.0,1.0,1.0
-866,ventral spinocerebellar tract,204,204,204,1.0,1.0,1.0
-78,middle cerebellar peduncle,204,204,204,1.0,1.0,1.0
-1123,inferior cerebellar peduncle,204,204,204,1.0,1.0,1.0
-553,dorsal spinocerebellar tract,204,204,204,1.0,1.0,1.0
-499,cuneocerebellar tract,204,204,204,1.0,1.0,1.0
-650,juxtarestiform body,204,204,204,1.0,1.0,1.0
-490,bulbocerebellar tract,204,204,204,1.0,1.0,1.0
-404,olivocerebellar tract,204,204,204,1.0,1.0,1.0
-410,reticulocerebellar tract,204,204,204,1.0,1.0,1.0
-373,trigeminocerebellar tract,204,204,204,1.0,1.0,1.0
-728,arbor vitae,204,204,204,1.0,1.0,1.0
-484682512,supra-callosal cerebral white matter,204,204,204,1.0,1.0,1.0
-983,lateral forebrain bundle system,204,204,204,1.0,1.0,1.0
-776,corpus callosum,204,204,204,1.0,1.0,1.0
-956,"corpus callosum, anterior forceps",204,204,204,1.0,1.0,1.0
-579,external capsule,204,204,204,1.0,1.0,1.0
-964,"corpus callosum, extreme capsule",204,204,204,1.0,1.0,1.0
-1108,genu of corpus callosum,204,204,204,1.0,1.0,1.0
-971,"corpus callosum, posterior forceps",204,204,204,1.0,1.0,1.0
-979,"corpus callosum, rostrum",204,204,204,1.0,1.0,1.0
-484682516,"corpus callosum, body",204,204,204,1.0,1.0,1.0
-986,"corpus callosum, splenium",204,204,204,1.0,1.0,1.0
-784,corticospinal tract,204,204,204,1.0,1.0,1.0
-6,internal capsule,204,204,204,1.0,1.0,1.0
-924,cerebal peduncle,204,204,204,1.0,1.0,1.0
-1036,corticotectal tract,204,204,204,1.0,1.0,1.0
-1012,corticorubral tract,204,204,204,1.0,1.0,1.0
-1003,corticopontine tract,204,204,204,1.0,1.0,1.0
-994,corticobulbar tract,204,204,204,1.0,1.0,1.0
-190,pyramid,204,204,204,1.0,1.0,1.0
-198,pyramidal decussation,204,204,204,1.0,1.0,1.0
-1019,"corticospinal tract, crossed",204,204,204,1.0,1.0,1.0
-1028,"corticospinal tract, uncrossed",204,204,204,1.0,1.0,1.0
-896,thalamus related,204,204,204,1.0,1.0,1.0
-1092,external medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0
-14,internal medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0
-86,middle thalamic commissure,204,204,204,1.0,1.0,1.0
-365,thalamic peduncles,204,204,204,1.0,1.0,1.0
-484682520,optic radiation,204,204,204,1.0,1.0,1.0
-484682524,auditory radiation,204,204,204,1.0,1.0,1.0
-1000,extrapyramidal fiber systems,204,204,204,1.0,1.0,1.0
-760,cerebral nuclei related,204,204,204,1.0,1.0,1.0
-142,pallidothalmic pathway,204,204,204,1.0,1.0,1.0
-102,nigrostriatal tract,204,204,204,1.0,1.0,1.0
-109,nigrothalamic fibers,204,204,204,1.0,1.0,1.0
-134,pallidotegmental fascicle,204,204,204,1.0,1.0,1.0
-309,striatonigral pathway,204,204,204,1.0,1.0,1.0
-317,subthalamic fascicle,204,204,204,1.0,1.0,1.0
-877,tectospinal pathway,204,204,204,1.0,1.0,1.0
-1051,direct tectospinal pathway,204,204,204,1.0,1.0,1.0
-1060,doral tegmental decussation,204,204,204,1.0,1.0,1.0
-1043,crossed tectospinal pathway,204,204,204,1.0,1.0,1.0
-863,rubrospinal tract,204,204,204,1.0,1.0,1.0
-397,ventral tegmental decussation,204,204,204,1.0,1.0,1.0
-221,rubroreticular tract,204,204,204,1.0,1.0,1.0
-736,central tegmental bundle,204,204,204,1.0,1.0,1.0
-855,retriculospinal tract,204,204,204,1.0,1.0,1.0
-205,"retriculospinal tract, lateral part",204,204,204,1.0,1.0,1.0
-213,"retriculospinal tract, medial part",204,204,204,1.0,1.0,1.0
-941,vestibulospinal pathway,204,204,204,1.0,1.0,1.0
-991,medial forebrain bundle system,204,204,204,1.0,1.0,1.0
-768,cerebrum related,204,204,204,1.0,1.0,1.0
-884,amygdalar capsule,204,204,204,1.0,1.0,1.0
-892,ansa peduncularis,204,204,204,1.0,1.0,1.0
-908,"anterior commissure, temporal limb",204,204,204,1.0,1.0,1.0
-940,cingulum bundle,204,204,204,1.0,1.0,1.0
-1099,fornix system,204,204,204,1.0,1.0,1.0
-466,alveus,204,204,204,1.0,1.0,1.0
-530,dorsal fornix,204,204,204,1.0,1.0,1.0
-603,fimbria,204,204,204,1.0,1.0,1.0
-745,"precommissural fornix, general",204,204,204,1.0,1.0,1.0
-420,precommissural fornix diagonal band,204,204,204,1.0,1.0,1.0
-737,postcommissural fornix,204,204,204,1.0,1.0,1.0
-428,medial corticohypothalmic tract,204,204,204,1.0,1.0,1.0
-436,columns of the fornix,204,204,204,1.0,1.0,1.0
-618,hippocampal commissures,204,204,204,1.0,1.0,1.0
-443,dorsal hippocampal commissure,204,204,204,1.0,1.0,1.0
-449,ventral hippocampal commissure,204,204,204,1.0,1.0,1.0
-713,perforant path,204,204,204,1.0,1.0,1.0
-474,angular path,204,204,204,1.0,1.0,1.0
-37,longitudinal association bundle,204,204,204,1.0,1.0,1.0
-301,stria terminalis,204,204,204,1.0,1.0,1.0
-484682528,commissural branch of stria terminalis,204,204,204,1.0,1.0,1.0
-824,hypothalamus related,204,204,204,1.0,1.0,1.0
-54,medial forebrain bundle,204,204,204,1.0,1.0,1.0
-405,ventrolateral hypothalamic tract,204,204,204,1.0,1.0,1.0
-174,preoptic commissure,204,204,204,1.0,1.0,1.0
-349,supraoptic commissures,204,204,204,1.0,1.0,1.0
-817,"supraoptic commissures, anterior",204,204,204,1.0,1.0,1.0
-825,"supraoptic commissures, dorsal",204,204,204,1.0,1.0,1.0
-833,"supraoptic commissures, ventral",204,204,204,1.0,1.0,1.0
-166,premammillary commissure,204,204,204,1.0,1.0,1.0
-341,supramammillary decussation,204,204,204,1.0,1.0,1.0
-182,propriohypothalamic pathways,204,204,204,1.0,1.0,1.0
-762,"propriohypothalamic pathways, dorsal",204,204,204,1.0,1.0,1.0
-770,"propriohypothalamic pathways, lateral",204,204,204,1.0,1.0,1.0
-779,"propriohypothalamic pathways, medial",204,204,204,1.0,1.0,1.0
-787,"propriohypothalamic pathways, ventral",204,204,204,1.0,1.0,1.0
-150,periventricular bundle of the hypothalamus,204,204,204,1.0,1.0,1.0
-46,mammillary related,204,204,204,1.0,1.0,1.0
-753,principal mammillary tract,204,204,204,1.0,1.0,1.0
-690,mammilothalmic tract,204,204,204,1.0,1.0,1.0
-681,mammillotegmental tract,204,204,204,1.0,1.0,1.0
-673,mammillary peduncle,204,204,204,1.0,1.0,1.0
-1068,dorsal thalamus related,204,204,204,1.0,1.0,1.0
-722,periventricular bundle of the thalamus,204,204,204,1.0,1.0,1.0
-1083,epithalamus related,204,204,204,1.0,1.0,1.0
-802,stria medullaris,204,204,204,1.0,1.0,1.0
-595,fasciculus retroflexus,204,204,204,1.0,1.0,1.0
-611,habenular commissure,204,204,204,1.0,1.0,1.0
-730,pineal stalk,204,204,204,1.0,1.0,1.0
-70,midbrain related,204,204,204,1.0,1.0,1.0
-547,dorsal longitudinal fascicle,204,204,204,1.0,1.0,1.0
-563,dorsal tegmental tract,204,204,204,1.0,1.0,1.0
-73,ventricular systems,170,170,170,1.0,1.0,1.0
-81,lateral ventricle,170,170,170,1.0,1.0,1.0
-89,rhinocele,170,170,170,1.0,1.0,1.0
-98,subependymal zone,170,170,170,1.0,1.0,1.0
-108,choroid plexus,170,170,170,1.0,1.0,1.0
-116,choroid fissure,170,170,170,1.0,1.0,1.0
-124,interventricular foramen,170,170,170,1.0,1.0,1.0
-129,third ventricle,170,170,170,1.0,1.0,1.0
-140,cerebral aqueduct,170,170,170,1.0,1.0,1.0
-145,fourth ventricle,170,170,170,1.0,1.0,1.0
-153,lateral recess,170,170,170,1.0,1.0,1.0
-164,"central canal, spinal cord/medulla",170,170,170,1.0,1.0,1.0
-1024,grooves,170,170,170,1.0,1.0,1.0
-1032,grooves of the cerebral cortex,170,170,170,1.0,1.0,1.0
-1055,endorhinal groove,170,170,170,1.0,1.0,1.0
-1063,hippocampal fissure,170,170,170,1.0,1.0,1.0
-1071,rhinal fissure,170,170,170,1.0,1.0,1.0
-1078,rhinal incisure,170,170,170,1.0,1.0,1.0
-1040,grooves of the cerebellar cortex,170,170,170,1.0,1.0,1.0
-1087,precentral fissure,170,170,170,1.0,1.0,1.0
-1095,preculminate fissure,170,170,170,1.0,1.0,1.0
-1103,primary fissure,170,170,170,1.0,1.0,1.0
-1112,posterior superior fissure,170,170,170,1.0,1.0,1.0
-1119,prepyramidal fissure,170,170,170,1.0,1.0,1.0
-3,secondary fissure,170,170,170,1.0,1.0,1.0
-11,posterolateral fissure,170,170,170,1.0,1.0,1.0
-18,nodular fissure,170,170,170,1.0,1.0,1.0
-25,simple fissure,170,170,170,1.0,1.0,1.0
-34,intercrural fissure,170,170,170,1.0,1.0,1.0
-43,ansoparamedian fissure,170,170,170,1.0,1.0,1.0
-49,intraparafloccular fissure,170,170,170,1.0,1.0,1.0
-57,paramedian sulcus,170,170,170,1.0,1.0,1.0
-65,parafloccular sulcus,170,170,170,1.0,1.0,1.0
-624,Interpeduncular fossa,170,170,170,1.0,1.0,1.0
-304325711,retina,127,46,126,1.0,1.0,1.0
diff --git a/annotation_volumes/allen2017_colours.csv b/annotation_volumes/allen2017_colours.csv
deleted file mode 100644
index 8c942d0ea895fa53fc6b419a59681aaf4d2a0276..0000000000000000000000000000000000000000
--- a/annotation_volumes/allen2017_colours.csv
+++ /dev/null
@@ -1,1329 +0,0 @@
-idx,name,r,g,b,a,VIS,MSH
-0,Clear Label,0,0,0,1.0,1.0,1.0
-997,root,255,255,255,1.0,1.0,1.0
-8,Basic cell groups and regions,191,218,227,1.0,1.0,1.0
-567,Cerebrum,176,240,255,1.0,1.0,1.0
-688,Cerebral cortex,176,255,184,1.0,1.0,1.0
-695,Cortical plate,112,255,112,1.0,1.0,1.0
-315,Isocortex,112,255,113,1.0,1.0,1.0
-184,"Frontal pole, cerebral cortex",38,143,69,1.0,1.0,1.0
-68,"Frontal pole, layer 1",38,143,69,1.0,1.0,1.0
-667,"Frontal pole, layer 2/3",38,143,69,1.0,1.0,1.0
-526157192,"Frontal pole, layer 5",38,143,69,1.0,1.0,1.0
-526157196,"Frontal pole, layer 6a",38,143,69,1.0,1.0,1.0
-526322264,"Frontal pole, layer 6b",38,143,69,1.0,1.0,1.0
-500,Somatomotor areas,31,157,90,1.0,1.0,1.0
-107,"Somatomotor areas, Layer 1",31,157,90,1.0,1.0,1.0
-219,"Somatomotor areas, Layer 2/3",31,157,90,1.0,1.0,1.0
-299,"Somatomotor areas, Layer 5",31,157,90,1.0,1.0,1.0
-644,"Somatomotor areas, Layer 6a",31,157,90,1.0,1.0,1.0
-947,"Somatomotor areas, Layer 6b",31,157,90,1.0,1.0,1.0
-985,Primary motor area,31,157,90,1.0,1.0,1.0
-320,"Primary motor area, Layer 1",31,157,90,1.0,1.0,1.0
-943,"Primary motor area, Layer 2/3",31,157,90,1.0,1.0,1.0
-648,"Primary motor area, Layer 5",31,157,90,1.0,1.0,1.0
-844,"Primary motor area, Layer 6a",31,157,90,1.0,1.0,1.0
-882,"Primary motor area, Layer 6b",31,157,90,1.0,1.0,1.0
-993,Secondary motor area,31,157,90,1.0,1.0,1.0
-656,"Secondary motor area, layer 1",31,157,90,1.0,1.0,1.0
-962,"Secondary motor area, layer 2/3",31,157,90,1.0,1.0,1.0
-767,"Secondary motor area, layer 5",31,157,90,1.0,1.0,1.0
-1021,"Secondary motor area, layer 6a",31,157,90,1.0,1.0,1.0
-1085,"Secondary motor area, layer 6b",31,157,90,1.0,1.0,1.0
-453,Somatosensory areas,24,128,100,1.0,1.0,1.0
-12993,"Somatosensory areas, layer 1",24,128,100,1.0,1.0,1.0
-12994,"Somatosensory areas, layer 2/3",24,128,100,1.0,1.0,1.0
-12995,"Somatosensory areas, layer 4",24,128,100,1.0,1.0,1.0
-12996,"Somatosensory areas, layer 5",24,128,100,1.0,1.0,1.0
-12997,"Somatosensory areas, layer 6a",24,128,100,1.0,1.0,1.0
-12998,"Somatosensory areas, layer 6b",24,128,100,1.0,1.0,1.0
-322,Primary somatosensory area,24,128,100,1.0,1.0,1.0
-793,"Primary somatosensory area, layer 1",24,128,100,1.0,1.0,1.0
-346,"Primary somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0
-865,"Primary somatosensory area, layer 4",24,128,100,1.0,1.0,1.0
-921,"Primary somatosensory area, layer 5",24,128,100,1.0,1.0,1.0
-686,"Primary somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0
-719,"Primary somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0
-353,"Primary somatosensory area, nose",24,128,100,1.0,1.0,1.0
-558,"Primary somatosensory area, nose, layer 1",24,128,100,1.0,1.0,1.0
-838,"Primary somatosensory area, nose, layer 2/3",24,128,100,1.0,1.0,1.0
-654,"Primary somatosensory area, nose, layer 4",24,128,100,1.0,1.0,1.0
-702,"Primary somatosensory area, nose, layer 5",24,128,100,1.0,1.0,1.0
-889,"Primary somatosensory area, nose, layer 6a",24,128,100,1.0,1.0,1.0
-929,"Primary somatosensory area, nose, layer 6b",24,128,100,1.0,1.0,1.0
-329,"Primary somatosensory area, barrel field",24,128,100,1.0,1.0,1.0
-981,"Primary somatosensory area, barrel field, layer 1",24,128,100,1.0,1.0,1.0
-201,"Primary somatosensory area, barrel field, layer 2/3",24,128,100,1.0,1.0,1.0
-1047,"Primary somatosensory area, barrel field, layer 4",24,128,100,1.0,1.0,1.0
-1070,"Primary somatosensory area, barrel field, layer 5",24,128,100,1.0,1.0,1.0
-1038,"Primary somatosensory area, barrel field, layer 6a",24,128,100,1.0,1.0,1.0
-1062,"Primary somatosensory area, barrel field, layer 6b",24,128,100,1.0,1.0,1.0
-480149202,Rostrolateral lateral visual area,24,128,100,1.0,1.0,1.0
-480149206,"Rostrolateral lateral visual area, layer 1",24,128,100,1.0,1.0,1.0
-480149210,"Rostrolateral lateral visual area, layer 2/3",24,128,100,1.0,1.0,1.0
-480149214,"Rostrolateral lateral visual area, layer 4",24,128,100,1.0,1.0,1.0
-480149218,"Rostrolateral lateral visual area,layer 5",24,128,100,1.0,1.0,1.0
-480149222,"Rostrolateral lateral visual area, layer 6a",24,128,100,1.0,1.0,1.0
-480149226,"Rostrolateral lateral visual area, layer 6b",24,128,100,1.0,1.0,1.0
-337,"Primary somatosensory area, lower limb",24,128,100,1.0,1.0,1.0
-1030,"Primary somatosensory area, lower limb, layer 1",24,128,100,1.0,1.0,1.0
-113,"Primary somatosensory area, lower limb, layer 2/3",24,128,100,1.0,1.0,1.0
-1094,"Primary somatosensory area, lower limb, layer 4",24,128,100,1.0,1.0,1.0
-1128,"Primary somatosensory area, lower limb, layer 5",24,128,100,1.0,1.0,1.0
-478,"Primary somatosensory area, lower limb, layer 6a",24,128,100,1.0,1.0,1.0
-510,"Primary somatosensory area, lower limb, layer 6b",24,128,100,1.0,1.0,1.0
-345,"Primary somatosensory area, mouth",24,128,100,1.0,1.0,1.0
-878,"Primary somatosensory area, mouth, layer 1",24,128,100,1.0,1.0,1.0
-657,"Primary somatosensory area, mouth, layer 2/3",24,128,100,1.0,1.0,1.0
-950,"Primary somatosensory area, mouth, layer 4",24,128,100,1.0,1.0,1.0
-974,"Primary somatosensory area, mouth, layer 5",24,128,100,1.0,1.0,1.0
-1102,"Primary somatosensory area, mouth, layer 6a",24,128,100,1.0,1.0,1.0
-2,"Primary somatosensory area, mouth, layer 6b",24,128,100,1.0,1.0,1.0
-369,"Primary somatosensory area, upper limb",24,128,100,1.0,1.0,1.0
-450,"Primary somatosensory area, upper limb, layer 1",24,128,100,1.0,1.0,1.0
-854,"Primary somatosensory area, upper limb, layer 2/3",24,128,100,1.0,1.0,1.0
-577,"Primary somatosensory area, upper limb, layer 4",24,128,100,1.0,1.0,1.0
-625,"Primary somatosensory area, upper limb, layer 5",24,128,100,1.0,1.0,1.0
-945,"Primary somatosensory area, upper limb, layer 6a",24,128,100,1.0,1.0,1.0
-1026,"Primary somatosensory area, upper limb, layer 6b",24,128,100,1.0,1.0,1.0
-361,"Primary somatosensory area, trunk",24,128,100,1.0,1.0,1.0
-1006,"Primary somatosensory area, trunk, layer 1",24,128,100,1.0,1.0,1.0
-670,"Primary somatosensory area, trunk, layer 2/3",24,128,100,1.0,1.0,1.0
-1086,"Primary somatosensory area, trunk, layer 4",24,128,100,1.0,1.0,1.0
-1111,"Primary somatosensory area, trunk, layer 5",24,128,100,1.0,1.0,1.0
-9,"Primary somatosensory area, trunk, layer 6a",24,128,100,1.0,1.0,1.0
-461,"Primary somatosensory area, trunk, layer 6b",24,128,100,1.0,1.0,1.0
-182305689,"Primary somatosensory area, unassigned",24,128,100,1.0,1.0,1.0
-182305693,"Primary somatosensory area, unassigned, layer 1",24,128,100,1.0,1.0,1.0
-182305697,"Primary somatosensory area, unassigned, layer 2/3",24,128,100,1.0,1.0,1.0
-182305701,"Primary somatosensory area, unassigned, layer 4",24,128,100,1.0,1.0,1.0
-182305705,"Primary somatosensory area, unassigned, layer 5",24,128,100,1.0,1.0,1.0
-182305709,"Primary somatosensory area, unassigned, layer 6a",24,128,100,1.0,1.0,1.0
-182305713,"Primary somatosensory area, unassigned, layer 6b",24,128,100,1.0,1.0,1.0
-378,Supplemental somatosensory area,24,128,100,1.0,1.0,1.0
-873,"Supplemental somatosensory area, layer 1",24,128,100,1.0,1.0,1.0
-806,"Supplemental somatosensory area, layer 2/3",24,128,100,1.0,1.0,1.0
-1035,"Supplemental somatosensory area, layer 4",24,128,100,1.0,1.0,1.0
-1090,"Supplemental somatosensory area, layer 5",24,128,100,1.0,1.0,1.0
-862,"Supplemental somatosensory area, layer 6a",24,128,100,1.0,1.0,1.0
-893,"Supplemental somatosensory area, layer 6b",24,128,100,1.0,1.0,1.0
-1057,Gustatory areas,0,156,117,1.0,1.0,1.0
-36,"Gustatory areas, layer 1",0,156,117,1.0,1.0,1.0
-180,"Gustatory areas, layer 2/3",0,156,117,1.0,1.0,1.0
-148,"Gustatory areas, layer 4",0,156,117,1.0,1.0,1.0
-187,"Gustatory areas, layer 5",0,156,117,1.0,1.0,1.0
-638,"Gustatory areas, layer 6a",0,156,117,1.0,1.0,1.0
-662,"Gustatory areas, layer 6b",0,156,117,1.0,1.0,1.0
-677,Visceral area,17,173,131,1.0,1.0,1.0
-897,"Visceral area, layer 1",17,173,131,1.0,1.0,1.0
-1106,"Visceral area, layer 2/3",17,173,131,1.0,1.0,1.0
-1010,"Visceral area, layer 4",17,173,131,1.0,1.0,1.0
-1058,"Visceral area, layer 5",17,173,131,1.0,1.0,1.0
-857,"Visceral area, layer 6a",17,173,131,1.0,1.0,1.0
-849,"Visceral area, layer 6b",17,173,131,1.0,1.0,1.0
-247,Auditory areas,1,147,153,1.0,1.0,1.0
-1011,Dorsal auditory area,1,147,153,1.0,1.0,1.0
-527,"Dorsal auditory area, layer 1",1,147,153,1.0,1.0,1.0
-600,"Dorsal auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-678,"Dorsal auditory area, layer 4",1,147,153,1.0,1.0,1.0
-252,"Dorsal auditory area, layer 5",1,147,153,1.0,1.0,1.0
-156,"Dorsal auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-243,"Dorsal auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-480149230,Laterolateral anterior visual area,1,147,153,1.0,1.0,1.0
-480149234,"Laterolateral anterior visual area, layer 1",1,147,153,1.0,1.0,1.0
-480149238,"Laterolateral anterior visual area, layer 2/3",1,147,153,1.0,1.0,1.0
-480149242,"Laterolateral anterior visual area, layer 4",1,147,153,1.0,1.0,1.0
-480149246,"Laterolateral anterior visual area,layer 5",1,147,153,1.0,1.0,1.0
-480149250,"Laterolateral anterior visual area, layer 6a",1,147,153,1.0,1.0,1.0
-480149254,"Laterolateral anterior visual area, layer 6b",1,147,153,1.0,1.0,1.0
-1002,Primary auditory area,1,147,153,1.0,1.0,1.0
-735,"Primary auditory area, layer 1",1,147,153,1.0,1.0,1.0
-251,"Primary auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-816,"Primary auditory area, layer 4",1,147,153,1.0,1.0,1.0
-847,"Primary auditory area, layer 5",1,147,153,1.0,1.0,1.0
-954,"Primary auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-1005,"Primary auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-1027,Posterior auditory area,1,147,153,1.0,1.0,1.0
-696,"Posterior auditory area, layer 1",1,147,153,1.0,1.0,1.0
-643,"Posterior auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-759,"Posterior auditory area, layer 4",1,147,153,1.0,1.0,1.0
-791,"Posterior auditory area, layer 5",1,147,153,1.0,1.0,1.0
-249,"Posterior auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-456,"Posterior auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-1018,Ventral auditory area,1,147,153,1.0,1.0,1.0
-959,"Ventral auditory area, layer 1",1,147,153,1.0,1.0,1.0
-755,"Ventral auditory area, layer 2/3",1,147,153,1.0,1.0,1.0
-990,"Ventral auditory area, layer 4",1,147,153,1.0,1.0,1.0
-1023,"Ventral auditory area, layer 5",1,147,153,1.0,1.0,1.0
-520,"Ventral auditory area, layer 6a",1,147,153,1.0,1.0,1.0
-598,"Ventral auditory area, layer 6b",1,147,153,1.0,1.0,1.0
-669,Visual areas,8,133,140,1.0,1.0,1.0
-801,"Visual areas, layer 1",8,133,140,1.0,1.0,1.0
-561,"Visual areas, layer 2/3",8,133,140,1.0,1.0,1.0
-913,"Visual areas, layer 4",8,133,140,1.0,1.0,1.0
-937,"Visual areas, layer 5",8,133,140,1.0,1.0,1.0
-457,"Visual areas, layer 6a",8,133,140,1.0,1.0,1.0
-497,"Visual areas, layer 6b",8,133,140,1.0,1.0,1.0
-402,Anterolateral visual area,8,133,140,1.0,1.0,1.0
-1074,"Anterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-905,"Anterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-1114,"Anterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-233,"Anterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-601,"Anterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-649,"Anterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-394,Anteromedial visual area,8,133,140,1.0,1.0,1.0
-281,"Anteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0
-1066,"Anteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-401,"Anteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0
-433,"Anteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0
-1046,"Anteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0
-441,"Anteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0
-409,Lateral visual area,8,133,140,1.0,1.0,1.0
-421,"Lateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-973,"Lateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-573,"Lateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-613,"Lateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-74,"Lateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-121,"Lateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-385,Primary visual area,8,133,140,1.0,1.0,1.0
-593,"Primary visual area, layer 1",8,133,140,1.0,1.0,1.0
-821,"Primary visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-721,"Primary visual area, layer 4",8,133,140,1.0,1.0,1.0
-778,"Primary visual area, layer 5",8,133,140,1.0,1.0,1.0
-33,"Primary visual area, layer 6a",8,133,140,1.0,1.0,1.0
-305,"Primary visual area, layer 6b",8,133,140,1.0,1.0,1.0
-425,Posterolateral visual area,8,133,140,1.0,1.0,1.0
-750,"Posterolateral visual area, layer 1",8,133,140,1.0,1.0,1.0
-269,"Posterolateral visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-869,"Posterolateral visual area, layer 4",8,133,140,1.0,1.0,1.0
-902,"Posterolateral visual area, layer 5",8,133,140,1.0,1.0,1.0
-377,"Posterolateral visual area, layer 6a",8,133,140,1.0,1.0,1.0
-393,"Posterolateral visual area, layer 6b",8,133,140,1.0,1.0,1.0
-533,posteromedial visual area,8,133,140,1.0,1.0,1.0
-805,"posteromedial visual area, layer 1",8,133,140,1.0,1.0,1.0
-41,"posteromedial visual area, layer 2/3",8,133,140,1.0,1.0,1.0
-501,"posteromedial visual area, layer 4",8,133,140,1.0,1.0,1.0
-565,"posteromedial visual area, layer 5",8,133,140,1.0,1.0,1.0
-257,"posteromedial visual area, layer 6a",8,133,140,1.0,1.0,1.0
-469,"posteromedial visual area, layer 6b",8,133,140,1.0,1.0,1.0
-312782574,Laterointermediate area,8,133,140,1.0,1.0,1.0
-312782578,"Laterointermediate area, layer 1",8,133,140,1.0,1.0,1.0
-312782582,"Laterointermediate area, layer 2/3",8,133,140,1.0,1.0,1.0
-312782586,"Laterointermediate area, layer 4",8,133,140,1.0,1.0,1.0
-312782590,"Laterointermediate area, layer 5",8,133,140,1.0,1.0,1.0
-312782594,"Laterointermediate area, layer 6a",8,133,140,1.0,1.0,1.0
-312782598,"Laterointermediate area, layer 6b",8,133,140,1.0,1.0,1.0
-312782628,Postrhinal area,8,133,140,1.0,1.0,1.0
-312782632,"Postrhinal area, layer 1",8,133,140,1.0,1.0,1.0
-312782636,"Postrhinal area, layer 2/3",8,133,140,1.0,1.0,1.0
-312782640,"Postrhinal area, layer 4",8,133,140,1.0,1.0,1.0
-312782644,"Postrhinal area, layer 5",8,133,140,1.0,1.0,1.0
-312782648,"Postrhinal area, layer 6a",8,133,140,1.0,1.0,1.0
-312782652,"Postrhinal area, layer 6b",8,133,140,1.0,1.0,1.0
-31,Anterior cingulate area,64,166,102,1.0,1.0,1.0
-572,"Anterior cingulate area, layer 1",64,166,102,1.0,1.0,1.0
-1053,"Anterior cingulate area, layer 2/3",64,166,102,1.0,1.0,1.0
-739,"Anterior cingulate area, layer 5",64,166,102,1.0,1.0,1.0
-179,"Anterior cingulate area, layer 6a",64,166,102,1.0,1.0,1.0
-227,"Anterior cingulate area, layer 6b",64,166,102,1.0,1.0,1.0
-39,"Anterior cingulate area, dorsal part",64,166,102,1.0,1.0,1.0
-935,"Anterior cingulate area, dorsal part, layer 1",64,166,102,1.0,1.0,1.0
-211,"Anterior cingulate area, dorsal part, layer 2/3",64,166,102,1.0,1.0,1.0
-1015,"Anterior cingulate area, dorsal part, layer 5",64,166,102,1.0,1.0,1.0
-919,"Anterior cingulate area, dorsal part, layer 6a",64,166,102,1.0,1.0,1.0
-927,"Anterior cingulate area, dorsal part, layer 6b",64,166,102,1.0,1.0,1.0
-48,"Anterior cingulate area, ventral part",64,166,102,1.0,1.0,1.0
-588,"Anterior cingulate area, ventral part, layer 1",64,166,102,1.0,1.0,1.0
-296,"Anterior cingulate area, ventral part, layer 2/3",64,166,102,1.0,1.0,1.0
-772,"Anterior cingulate area, ventral part, layer 5",64,166,102,1.0,1.0,1.0
-810,"Anterior cingulate area, ventral part, 6a",64,166,102,1.0,1.0,1.0
-819,"Anterior cingulate area, ventral part, 6b",64,166,102,1.0,1.0,1.0
-972,Prelimbic area,47,168,80,1.0,1.0,1.0
-171,"Prelimbic area, layer 1",47,168,80,1.0,1.0,1.0
-195,"Prelimbic area, layer 2",47,168,80,1.0,1.0,1.0
-304,"Prelimbic area, layer 2/3",47,168,80,1.0,1.0,1.0
-363,"Prelimbic area, layer 5",47,168,80,1.0,1.0,1.0
-84,"Prelimbic area, layer 6a",47,168,80,1.0,1.0,1.0
-132,"Prelimbic area, layer 6b",47,168,80,1.0,1.0,1.0
-44,Infralimbic area,89,179,99,1.0,1.0,1.0
-707,"Infralimbic area, layer 1",89,179,99,1.0,1.0,1.0
-747,"Infralimbic area, layer 2",89,179,99,1.0,1.0,1.0
-556,"Infralimbic area, layer 2/3",89,179,99,1.0,1.0,1.0
-827,"Infralimbic area, layer 5",89,179,99,1.0,1.0,1.0
-1054,"Infralimbic area, layer 6a",89,179,99,1.0,1.0,1.0
-1081,"Infralimbic area, layer 6b",89,179,99,1.0,1.0,1.0
-714,Orbital area,36,138,94,1.0,1.0,1.0
-264,"Orbital area, layer 1",36,138,94,1.0,1.0,1.0
-492,"Orbital area, layer 2/3",36,138,94,1.0,1.0,1.0
-352,"Orbital area, layer 5",36,138,94,1.0,1.0,1.0
-476,"Orbital area, layer 6a",36,138,94,1.0,1.0,1.0
-516,"Orbital area, layer 6b",36,138,94,1.0,1.0,1.0
-723,"Orbital area, lateral part",36,138,94,1.0,1.0,1.0
-448,"Orbital area, lateral part, layer 1",36,138,94,1.0,1.0,1.0
-412,"Orbital area, lateral part, layer 2/3",36,138,94,1.0,1.0,1.0
-630,"Orbital area, lateral part, layer 5",36,138,94,1.0,1.0,1.0
-440,"Orbital area, lateral part, layer 6a",36,138,94,1.0,1.0,1.0
-488,"Orbital area, lateral part, layer 6b",36,138,94,1.0,1.0,1.0
-731,"Orbital area, medial part",36,138,94,1.0,1.0,1.0
-484,"Orbital area, medial part, layer 1",36,138,94,1.0,1.0,1.0
-524,"Orbital area, medial part, layer 2",36,138,94,1.0,1.0,1.0
-582,"Orbital area, medial part, layer 2/3",36,138,94,1.0,1.0,1.0
-620,"Orbital area, medial part, layer 5",36,138,94,1.0,1.0,1.0
-910,"Orbital area, medial part, layer 6a",36,138,94,1.0,1.0,1.0
-527696977,"Orbital area, medial part, layer 6b",36,138,94,1.0,1.0,1.0
-738,"Orbital area, ventral part",36,138,94,1.0,1.0,1.0
-746,"Orbital area, ventrolateral part",36,138,94,1.0,1.0,1.0
-969,"Orbital area, ventrolateral part, layer 1",36,138,94,1.0,1.0,1.0
-288,"Orbital area, ventrolateral part, layer 2/3",36,138,94,1.0,1.0,1.0
-1125,"Orbital area, ventrolateral part, layer 5",36,138,94,1.0,1.0,1.0
-608,"Orbital area, ventrolateral part, layer 6a",36,138,94,1.0,1.0,1.0
-680,"Orbital area, ventrolateral part, layer 6b",36,138,94,1.0,1.0,1.0
-95,Agranular insular area,33,152,102,1.0,1.0,1.0
-104,"Agranular insular area, dorsal part",33,152,102,1.0,1.0,1.0
-996,"Agranular insular area, dorsal part, layer 1",33,152,102,1.0,1.0,1.0
-328,"Agranular insular area, dorsal part, layer 2/3",33,152,102,1.0,1.0,1.0
-1101,"Agranular insular area, dorsal part, layer 5",33,152,102,1.0,1.0,1.0
-783,"Agranular insular area, dorsal part, layer 6a",33,152,102,1.0,1.0,1.0
-831,"Agranular insular area, dorsal part, layer 6b",33,152,102,1.0,1.0,1.0
-111,"Agranular insular area, posterior part",33,152,102,1.0,1.0,1.0
-120,"Agranular insular area, posterior part, layer 1",33,152,102,1.0,1.0,1.0
-163,"Agranular insular area, posterior part, layer 2/3",33,152,102,1.0,1.0,1.0
-344,"Agranular insular area, posterior part, layer 5",33,152,102,1.0,1.0,1.0
-314,"Agranular insular area, posterior part, layer 6a",33,152,102,1.0,1.0,1.0
-355,"Agranular insular area, posterior part, layer 6b",33,152,102,1.0,1.0,1.0
-119,"Agranular insular area, ventral part",33,152,102,1.0,1.0,1.0
-704,"Agranular insular area, ventral part, layer 1",33,152,102,1.0,1.0,1.0
-694,"Agranular insular area, ventral part, layer 2/3",33,152,102,1.0,1.0,1.0
-800,"Agranular insular area, ventral part, layer 5",33,152,102,1.0,1.0,1.0
-675,"Agranular insular area, ventral part, layer 6a",33,152,102,1.0,1.0,1.0
-699,"Agranular insular area, ventral part, layer 6b",33,152,102,1.0,1.0,1.0
-254,Retrosplenial area,26,166,152,1.0,1.0,1.0
-894,"Retrosplenial area, lateral agranular part",26,166,152,1.0,1.0,1.0
-671,"Retrosplenial area, lateral agranular part, layer 1",26,166,152,1.0,1.0,1.0
-965,"Retrosplenial area, lateral agranular part, layer 2/3",26,166,152,1.0,1.0,1.0
-774,"Retrosplenial area, lateral agranular part, layer 5",26,166,152,1.0,1.0,1.0
-906,"Retrosplenial area, lateral agranular part, layer 6a",26,166,152,1.0,1.0,1.0
-279,"Retrosplenial area, lateral agranular part, layer 6b",26,166,152,1.0,1.0,1.0
-480149258,Mediomedial anterior visual area,26,166,152,1.0,1.0,1.0
-480149262,"Mediomedial anterior visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149266,"Mediomedial anterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149270,"Mediomedial anterior visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149274,"Mediomedial anterior visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149278,"Mediomedial anterior visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149282,"Mediomedial anterior visual area, layer 6b",26,166,152,1.0,1.0,1.0
-480149286,Mediomedial posterior visual area,26,166,152,1.0,1.0,1.0
-480149290,"Mediomedial posterior visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149294,"Mediomedial posterior visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149298,"Mediomedial posterior visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149302,"Mediomedial posterior visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149306,"Mediomedial posterior visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149310,"Mediomedial posterior visual area, layer 6b",26,166,152,1.0,1.0,1.0
-480149314,Medial visual area,26,166,152,1.0,1.0,1.0
-480149318,"Medial visual area, layer 1",26,166,152,1.0,1.0,1.0
-480149322,"Medial visual area, layer 2/3",26,166,152,1.0,1.0,1.0
-480149326,"Medial visual area, layer 4",26,166,152,1.0,1.0,1.0
-480149330,"Medial visual area,layer 5",26,166,152,1.0,1.0,1.0
-480149334,"Medial visual area, layer 6a",26,166,152,1.0,1.0,1.0
-480149338,"Medial visual area, layer 6b",26,166,152,1.0,1.0,1.0
-879,"Retrosplenial area, dorsal part",26,166,152,1.0,1.0,1.0
-442,"Retrosplenial area, dorsal part, layer 1",26,166,152,1.0,1.0,1.0
-434,"Retrosplenial area, dorsal part, layer 2/3",26,166,152,1.0,1.0,1.0
-545,"Retrosplenial area, dorsal part, layer 4",26,166,152,1.0,1.0,1.0
-610,"Retrosplenial area, dorsal part, layer 5",26,166,152,1.0,1.0,1.0
-274,"Retrosplenial area, dorsal part, layer 6a",26,166,152,1.0,1.0,1.0
-330,"Retrosplenial area, dorsal part, layer 6b",26,166,152,1.0,1.0,1.0
-886,"Retrosplenial area, ventral part",26,166,152,1.0,1.0,1.0
-542,"Retrosplenial area, ventral part, layer 1",26,166,152,1.0,1.0,1.0
-606,"Retrosplenial area, ventral part, layer 2",26,166,152,1.0,1.0,1.0
-430,"Retrosplenial area, ventral part, layer 2/3",26,166,152,1.0,1.0,1.0
-687,"Retrosplenial area, ventral part, layer 5",26,166,152,1.0,1.0,1.0
-590,"Retrosplenial area, ventral part, layer 6a",26,166,152,1.0,1.0,1.0
-622,"Retrosplenial area, ventral part, layer 6b",26,166,152,1.0,1.0,1.0
-22,Posterior parietal association areas,0,159,172,1.0,1.0,1.0
-532,"Posterior parietal association areas, layer 1",0,159,172,1.0,1.0,1.0
-241,"Posterior parietal association areas, layer 2/3",0,159,172,1.0,1.0,1.0
-635,"Posterior parietal association areas, layer 4",0,159,172,1.0,1.0,1.0
-683,"Posterior parietal association areas, layer 5",0,159,172,1.0,1.0,1.0
-308,"Posterior parietal association areas, layer 6a",0,159,172,1.0,1.0,1.0
-340,"Posterior parietal association areas, layer 6b",0,159,172,1.0,1.0,1.0
-312782546,Anterior area,0,159,172,1.0,1.0,1.0
-312782550,"Anterior area, layer 1",0,159,172,1.0,1.0,1.0
-312782554,"Anterior area, layer 2/3",0,159,172,1.0,1.0,1.0
-312782558,"Anterior area, layer 4",0,159,172,1.0,1.0,1.0
-312782562,"Anterior area, layer 5",0,159,172,1.0,1.0,1.0
-312782566,"Anterior area, layer 6a",0,159,172,1.0,1.0,1.0
-312782570,"Anterior area, layer 6b",0,159,172,1.0,1.0,1.0
-417,Rostrolateral visual area,0,159,172,1.0,1.0,1.0
-312782604,"Rostrolateral area, layer 1",0,159,172,1.0,1.0,1.0
-312782608,"Rostrolateral area, layer 2/3",0,159,172,1.0,1.0,1.0
-312782612,"Rostrolateral area, layer 4",0,159,172,1.0,1.0,1.0
-312782616,"Rostrolateral area, layer 5",0,159,172,1.0,1.0,1.0
-312782620,"Rostrolateral area, layer 6a",0,159,172,1.0,1.0,1.0
-312782624,"Rostrolateral area, layer 6b",0,159,172,1.0,1.0,1.0
-541,Temporal association areas,21,176,179,1.0,1.0,1.0
-97,"Temporal association areas, layer 1",21,176,179,1.0,1.0,1.0
-1127,"Temporal association areas, layer 2/3",21,176,179,1.0,1.0,1.0
-234,"Temporal association areas, layer 4",21,176,179,1.0,1.0,1.0
-289,"Temporal association areas, layer 5",21,176,179,1.0,1.0,1.0
-729,"Temporal association areas, layer 6a",21,176,179,1.0,1.0,1.0
-786,"Temporal association areas, layer 6b",21,176,179,1.0,1.0,1.0
-922,Perirhinal area,14,150,132,1.0,1.0,1.0
-540,"Perirhinal area, layer 1",14,150,132,1.0,1.0,1.0
-888,"Perirhinal area, layer 2/3",14,150,132,1.0,1.0,1.0
-692,"Perirhinal area, layer 5",14,150,132,1.0,1.0,1.0
-335,"Perirhinal area, layer 6a",14,150,132,1.0,1.0,1.0
-368,"Perirhinal area, layer 6b",14,150,132,1.0,1.0,1.0
-895,Ectorhinal area,13,159,145,1.0,1.0,1.0
-836,Ectorhinal area/Layer 1,13,159,145,1.0,1.0,1.0
-427,Ectorhinal area/Layer 2/3,13,159,145,1.0,1.0,1.0
-988,Ectorhinal area/Layer 5,13,159,145,1.0,1.0,1.0
-977,Ectorhinal area/Layer 6a,13,159,145,1.0,1.0,1.0
-1045,Ectorhinal area/Layer 6b,13,159,145,1.0,1.0,1.0
-698,Olfactory areas,154,210,189,1.0,1.0,1.0
-507,Main olfactory bulb,154,210,189,1.0,1.0,1.0
-212,"Main olfactory bulb, glomerular layer",130,199,174,1.0,1.0,1.0
-220,"Main olfactory bulb, granule layer",130,199,174,1.0,1.0,1.0
-228,"Main olfactory bulb, inner plexiform layer",154,210,189,1.0,1.0,1.0
-236,"Main olfactory bulb, mitral layer",130,199,174,1.0,1.0,1.0
-244,"Main olfactory bulb, outer plexiform layer",154,210,189,1.0,1.0,1.0
-151,Accessory olfactory bulb,157,240,210,1.0,1.0,1.0
-188,"Accessory olfactory bulb, glomerular layer",157,240,210,1.0,1.0,1.0
-196,"Accessory olfactory bulb, granular layer",149,228,200,1.0,1.0,1.0
-204,"Accessory olfactory bulb, mitral layer",157,240,210,1.0,1.0,1.0
-159,Anterior olfactory nucleus,84,191,148,1.0,1.0,1.0
-167,"Anterior olfactory nucleus, dorsal part",84,191,148,1.0,1.0,1.0
-175,"Anterior olfactory nucleus, external part",84,191,148,1.0,1.0,1.0
-183,"Anterior olfactory nucleus, lateral part",84,191,148,1.0,1.0,1.0
-191,"Anterior olfactory nucleus, medial part",84,191,148,1.0,1.0,1.0
-199,"Anterior olfactory nucleus, posteroventral part",84,191,148,1.0,1.0,1.0
-160,"Anterior olfactory nucleus, layer 1",84,191,148,1.0,1.0,1.0
-168,"Anterior olfactory nucleus, layer 2",84,191,148,1.0,1.0,1.0
-589,Taenia tecta,98,208,159,1.0,1.0,1.0
-597,"Taenia tecta, dorsal part",98,208,159,1.0,1.0,1.0
-297,"Taenia tecta, dorsal part, layers 1-4",98,208,159,1.0,1.0,1.0
-1034,"Taenia tecta, dorsal part, layer 1",98,208,159,1.0,1.0,1.0
-1042,"Taenia tecta, dorsal part, layer 2",98,208,159,1.0,1.0,1.0
-1050,"Taenia tecta, dorsal part, layer 3",98,208,159,1.0,1.0,1.0
-1059,"Taenia tecta, dorsal part, layer 4",98,208,159,1.0,1.0,1.0
-605,"Taenia tecta, ventral part",98,208,159,1.0,1.0,1.0
-306,"Taenia tecta, ventral part, layers 1-3",98,208,159,1.0,1.0,1.0
-1067,"Taenia tecta, ventral part, layer 1",98,208,159,1.0,1.0,1.0
-1075,"Taenia tecta, ventral part, layer 2",98,208,159,1.0,1.0,1.0
-1082,"Taenia tecta, ventral part, layer 3",98,208,159,1.0,1.0,1.0
-814,Dorsal peduncular area,164,218,164,1.0,1.0,1.0
-496,"Dorsal peduncular area, layer 1",164,218,164,1.0,1.0,1.0
-535,"Dorsal peduncular area, layer 2",164,218,164,1.0,1.0,1.0
-360,"Dorsal peduncular area, layer 2/3",164,218,164,1.0,1.0,1.0
-646,"Dorsal peduncular area, layer 5",164,218,164,1.0,1.0,1.0
-267,"Dorsal peduncular area, layer 6a",164,218,164,1.0,1.0,1.0
-961,Piriform area,106,203,186,1.0,1.0,1.0
-152,"Piriform area, layers 1-3",106,203,186,1.0,1.0,1.0
-276,"Piriform area, molecular layer",106,203,186,1.0,1.0,1.0
-284,"Piriform area, pyramidal layer",106,203,186,1.0,1.0,1.0
-291,"Piriform area, polymorph layer",106,203,186,1.0,1.0,1.0
-619,Nucleus of the lateral olfactory tract,149,228,200,1.0,1.0,1.0
-392,"Nucleus of the lateral olfactory tract, layers 1-3",149,228,200,1.0,1.0,1.0
-260,"Nucleus of the lateral olfactory tract, molecular layer",149,228,200,1.0,1.0,1.0
-268,"Nucleus of the lateral olfactory tract, pyramidal layer",149,228,200,1.0,1.0,1.0
-1139,"Nucleus of the lateral olfactory tract, layer 3",149,228,200,1.0,1.0,1.0
-631,Cortical amygdalar area,97,231,183,1.0,1.0,1.0
-639,"Cortical amygdalar area, anterior part",97,231,183,1.0,1.0,1.0
-192,"Cortical amygdalar area, anterior part, layer 1",97,231,183,1.0,1.0,1.0
-200,"Cortical amygdalar area, anterior part, layer 2",97,231,183,1.0,1.0,1.0
-208,"Cortical amygdalar area, anterior part, layer 3",97,231,183,1.0,1.0,1.0
-647,"Cortical amygdalar area, posterior part",97,231,183,1.0,1.0,1.0
-655,"Cortical amygdalar area, posterior part, lateral zone",97,231,183,1.0,1.0,1.0
-584,"Cortical amygdalar area, posterior part, lateral zone, layers 1-2",97,231,183,1.0,1.0,1.0
-376,"Cortical amygdalar area, posterior part, lateral zone, layers 1-3",97,231,183,1.0,1.0,1.0
-216,"Cortical amygdalar area, posterior part, lateral zone, layer 1",97,231,183,1.0,1.0,1.0
-224,"Cortical amygdalar area, posterior part, lateral zone, layer 2",97,231,183,1.0,1.0,1.0
-232,"Cortical amygdalar area, posterior part, lateral zone, layer 3",97,231,183,1.0,1.0,1.0
-663,"Cortical amygdalar area, posterior part, medial zone",97,231,183,1.0,1.0,1.0
-592,"Cortical amygdalar area, posterior part, medial zone, layers 1-2",97,231,183,1.0,1.0,1.0
-383,"Cortical amygdalar area, posterior part, medial zone, layers 1-3",97,231,183,1.0,1.0,1.0
-240,"Cortical amygdalar area, posterior part, medial zone, layer 1",97,231,183,1.0,1.0,1.0
-248,"Cortical amygdalar area, posterior part, medial zone, layer 2",97,231,183,1.0,1.0,1.0
-256,"Cortical amygdalar area, posterior part, medial zone, layer 3",97,231,183,1.0,1.0,1.0
-788,Piriform-amygdalar area,89,218,171,1.0,1.0,1.0
-400,"Piriform-amygdalar area, layers 1-3",89,218,171,1.0,1.0,1.0
-408,"Piriform-amygdalar area, molecular layer",89,218,171,1.0,1.0,1.0
-416,"Piriform-amygdalar area, pyramidal layer",89,218,171,1.0,1.0,1.0
-424,"Piriform-amygdalar area, polymorph layer",89,218,171,1.0,1.0,1.0
-566,Postpiriform transition area,168,236,211,1.0,1.0,1.0
-517,"Postpiriform transition area, layers 1-3",168,236,211,1.0,1.0,1.0
-1140,"Postpiriform transition area, layers 1",168,236,211,1.0,1.0,1.0
-1141,"Postpiriform transition area, layers 2",168,236,211,1.0,1.0,1.0
-1142,"Postpiriform transition area, layers 3",168,236,211,1.0,1.0,1.0
-1089,Hippocampal formation,126,208,75,1.0,1.0,1.0
-1080,Hippocampal region,126,208,75,1.0,1.0,1.0
-375,Ammon's horn,126,208,75,1.0,1.0,1.0
-382,Field CA1,126,208,75,1.0,1.0,1.0
-391,"Field CA1, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-399,"Field CA1, stratum oriens",126,208,75,1.0,1.0,1.0
-407,"Field CA1, pyramidal layer",102,168,61,1.0,1.0,1.0
-415,"Field CA1, stratum radiatum",126,208,75,1.0,1.0,1.0
-423,Field CA2,126,208,75,1.0,1.0,1.0
-431,"Field CA2, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-438,"Field CA2, stratum oriens",126,208,75,1.0,1.0,1.0
-446,"Field CA2, pyramidal layer",102,168,61,1.0,1.0,1.0
-454,"Field CA2, stratum radiatum",126,208,75,1.0,1.0,1.0
-463,Field CA3,126,208,75,1.0,1.0,1.0
-471,"Field CA3, stratum lacunosum-moleculare",126,208,75,1.0,1.0,1.0
-479,"Field CA3, stratum lucidum",126,208,75,1.0,1.0,1.0
-486,"Field CA3, stratum oriens",126,208,75,1.0,1.0,1.0
-495,"Field CA3, pyramidal layer",102,168,61,1.0,1.0,1.0
-504,"Field CA3, stratum radiatum",126,208,75,1.0,1.0,1.0
-726,Dentate gyrus,126,208,75,1.0,1.0,1.0
-10703,"Dentate gyrus, molecular layer",126,208,75,1.0,1.0,1.0
-10704,"Dentate gyrus, polymorph layer",126,208,75,1.0,1.0,1.0
-632,"Dentate gyrus, granule cell layer",102,168,61,1.0,1.0,1.0
-10702,"Dentate gyrus, subgranular zone",126,208,75,1.0,1.0,1.0
-734,Dentate gyrus crest,126,208,75,1.0,1.0,1.0
-742,"Dentate gyrus crest, molecular layer",126,208,75,1.0,1.0,1.0
-751,"Dentate gyrus crest, polymorph layer",126,208,75,1.0,1.0,1.0
-758,"Dentate gyrus crest, granule cell layer",126,208,75,1.0,1.0,1.0
-766,Dentate gyrus lateral blade,126,208,75,1.0,1.0,1.0
-775,"Dentate gyrus lateral blade, molecular layer",126,208,75,1.0,1.0,1.0
-782,"Dentate gyrus lateral blade, polymorph layer",126,208,75,1.0,1.0,1.0
-790,"Dentate gyrus lateral blade, granule cell layer",126,208,75,1.0,1.0,1.0
-799,Dentate gyrus medial blade,126,208,75,1.0,1.0,1.0
-807,"Dentate gyrus medial blade, molecular layer",126,208,75,1.0,1.0,1.0
-815,"Dentate gyrus medial blade, polymorph layer",126,208,75,1.0,1.0,1.0
-823,"Dentate gyrus medial blade, granule cell layer",126,208,75,1.0,1.0,1.0
-982,Fasciola cinerea,126,208,75,1.0,1.0,1.0
-19,Induseum griseum,126,208,75,1.0,1.0,1.0
-822,Retrohippocampal region,50,184,37,1.0,1.0,1.0
-909,Entorhinal area,50,184,37,1.0,1.0,1.0
-918,"Entorhinal area, lateral part",50,184,37,1.0,1.0,1.0
-1121,"Entorhinal area, lateral part, layer 1",50,184,37,1.0,1.0,1.0
-20,"Entorhinal area, lateral part, layer 2",50,184,37,1.0,1.0,1.0
-999,"Entorhinal area, lateral part, layer 2/3",50,184,37,1.0,1.0,1.0
-715,"Entorhinal area, lateral part, layer 2a",50,184,37,1.0,1.0,1.0
-764,"Entorhinal area, lateral part, layer 2b",50,184,37,1.0,1.0,1.0
-52,"Entorhinal area, lateral part, layer 3",50,184,37,1.0,1.0,1.0
-92,"Entorhinal area, lateral part, layer 4",50,184,37,1.0,1.0,1.0
-312,"Entorhinal area, lateral part, layer 4/5",50,184,37,1.0,1.0,1.0
-139,"Entorhinal area, lateral part, layer 5",50,184,37,1.0,1.0,1.0
-387,"Entorhinal area, lateral part, layer 5/6",50,184,37,1.0,1.0,1.0
-28,"Entorhinal area, lateral part, layer 6a",50,184,37,1.0,1.0,1.0
-60,"Entorhinal area, lateral part, layer 6b",50,184,37,1.0,1.0,1.0
-926,"Entorhinal area, medial part, dorsal zone",50,184,37,1.0,1.0,1.0
-526,"Entorhinal area, medial part, dorsal zone, layer 1",50,184,37,1.0,1.0,1.0
-543,"Entorhinal area, medial part, dorsal zone, layer 2",50,184,37,1.0,1.0,1.0
-468,"Entorhinal area, medial part, dorsal zone, layer 2a",50,184,37,1.0,1.0,1.0
-508,"Entorhinal area, medial part, dorsal zone, layer 2b",50,184,37,1.0,1.0,1.0
-664,"Entorhinal area, medial part, dorsal zone, layer 3",50,184,37,1.0,1.0,1.0
-712,"Entorhinal area, medial part, dorsal zone, layer 4",50,184,37,1.0,1.0,1.0
-727,"Entorhinal area, medial part, dorsal zone, layer 5",50,184,37,1.0,1.0,1.0
-550,"Entorhinal area, medial part, dorsal zone, layer 5/6",50,184,37,1.0,1.0,1.0
-743,"Entorhinal area, medial part, dorsal zone, layer 6",50,184,37,1.0,1.0,1.0
-934,"Entorhinal area, medial part, ventral zone",50,184,37,1.0,1.0,1.0
-259,"Entorhinal area, medial part, ventral zone, layer 1",50,184,37,1.0,1.0,1.0
-324,"Entorhinal area, medial part, ventral zone, layer 2",50,184,37,1.0,1.0,1.0
-371,"Entorhinal area, medial part, ventral zone, layer 3",50,184,37,1.0,1.0,1.0
-419,"Entorhinal area, medial part, ventral zone, layer 4",50,184,37,1.0,1.0,1.0
-1133,"Entorhinal area, medial part, ventral zone, layer 5/6",50,184,37,1.0,1.0,1.0
-843,Parasubiculum,114,213,105,1.0,1.0,1.0
-10693,"Parasubiculum, layer 1",114,213,105,1.0,1.0,1.0
-10694,"Parasubiculum, layer 2",114,213,105,1.0,1.0,1.0
-10695,"Parasubiculum, layer 3",114,213,105,1.0,1.0,1.0
-1037,Postsubiculum,72,200,60,1.0,1.0,1.0
-10696,"Postsubiculum, layer 1",72,200,60,1.0,1.0,1.0
-10697,"Postsubiculum, layer 2",72,200,60,1.0,1.0,1.0
-10698,"Postsubiculum, layer 3",72,200,60,1.0,1.0,1.0
-1084,Presubiculum,89,185,71,1.0,1.0,1.0
-10699,"Presubiculum, layer 1",89,185,71,1.0,1.0,1.0
-10700,"Presubiculum, layer 2",89,185,71,1.0,1.0,1.0
-10701,"Presubiculum, layer 3",89,185,71,1.0,1.0,1.0
-502,Subiculum,79,194,68,1.0,1.0,1.0
-509,"Subiculum, dorsal part",79,194,68,1.0,1.0,1.0
-829,"Subiculum, dorsal part, molecular layer",79,194,68,1.0,1.0,1.0
-845,"Subiculum, dorsal part, pyramidal layer",75,181,71,1.0,1.0,1.0
-837,"Subiculum, dorsal part, stratum radiatum",79,194,68,1.0,1.0,1.0
-518,"Subiculum, ventral part",79,194,68,1.0,1.0,1.0
-853,"Subiculum, ventral part, molecular layer",79,194,68,1.0,1.0,1.0
-870,"Subiculum, ventral part, pyramidal layer",75,181,71,1.0,1.0,1.0
-861,"Subiculum, ventral part, stratum radiatum",79,194,68,1.0,1.0,1.0
-484682470,Prosubiculum,88,186,72,1.0,1.0,1.0
-484682475,"Prosubiculum, dorsal part",88,186,72,1.0,1.0,1.0
-484682479,"Prosubiculum, dorsal part, molecular layer",88,186,72,1.0,1.0,1.0
-484682483,"Prosubiculum, dorsal part, pyramidal layer",86,184,75,1.0,1.0,1.0
-484682487,"Prosubiculum, dorsal part, stratum radiatum",88,186,72,1.0,1.0,1.0
-484682492,"Prosubiculum, ventral part",88,186,72,1.0,1.0,1.0
-484682496,"Prosubiculum, ventral part, molecular layer",88,186,72,1.0,1.0,1.0
-484682500,"Prosubiculum, ventral part, pyramidal layer",86,184,75,1.0,1.0,1.0
-484682504,"Prosubiculum, ventral part, stratum radiatum",88,186,72,1.0,1.0,1.0
-589508447,Hippocampo-amygdalar transition area,51,185,50,1.0,1.0,1.0
-484682508,Area prostriata,51,185,50,1.0,1.0,1.0
-703,Cortical subplate,138,218,135,1.0,1.0,1.0
-16,"Layer 6b, isocortex",138,218,135,1.0,1.0,1.0
-583,Claustrum,138,218,135,1.0,1.0,1.0
-942,Endopiriform nucleus,160,238,157,1.0,1.0,1.0
-952,"Endopiriform nucleus, dorsal part",160,238,157,1.0,1.0,1.0
-966,"Endopiriform nucleus, ventral part",160,238,157,1.0,1.0,1.0
-131,Lateral amygdalar nucleus,144,235,141,1.0,1.0,1.0
-295,Basolateral amygdalar nucleus,157,231,156,1.0,1.0,1.0
-303,"Basolateral amygdalar nucleus, anterior part",157,231,156,1.0,1.0,1.0
-311,"Basolateral amygdalar nucleus, posterior part",157,231,156,1.0,1.0,1.0
-451,"Basolateral amygdalar nucleus, ventral part",157,231,156,1.0,1.0,1.0
-319,Basomedial amygdalar nucleus,132,234,129,1.0,1.0,1.0
-327,"Basomedial amygdalar nucleus, anterior part",132,234,129,1.0,1.0,1.0
-334,"Basomedial amygdalar nucleus, posterior part",132,234,129,1.0,1.0,1.0
-780,Posterior amygdalar nucleus,151,236,147,1.0,1.0,1.0
-623,Cerebral nuclei,152,214,249,1.0,1.0,1.0
-477,Striatum,152,214,249,1.0,1.0,1.0
-485,Striatum dorsal region,152,214,249,1.0,1.0,1.0
-672,Caudoputamen,152,214,249,1.0,1.0,1.0
-493,Striatum ventral region,128,205,248,1.0,1.0,1.0
-56,Nucleus accumbens,128,205,248,1.0,1.0,1.0
-998,Fundus of striatum,128,205,248,1.0,1.0,1.0
-754,Olfactory tubercle,128,205,248,1.0,1.0,1.0
-481,Islands of Calleja,128,205,248,1.0,1.0,1.0
-489,Major island of Calleja,128,205,248,1.0,1.0,1.0
-144,"Olfactory tubercle, layers 1-3",128,205,248,1.0,1.0,1.0
-458,"Olfactory tubercle, molecular layer",128,205,248,1.0,1.0,1.0
-465,"Olfactory tubercle, pyramidal layer",128,205,248,1.0,1.0,1.0
-473,"Olfactory tubercle, polymorph layer",128,205,248,1.0,1.0,1.0
-549009199,Lateral strip of striatum,128,205,248,1.0,1.0,1.0
-275,Lateral septal complex,144,203,237,1.0,1.0,1.0
-242,Lateral septal nucleus,144,203,237,1.0,1.0,1.0
-250,"Lateral septal nucleus, caudal (caudodorsal) part",144,203,237,1.0,1.0,1.0
-258,"Lateral septal nucleus, rostral (rostroventral) part",144,203,237,1.0,1.0,1.0
-266,"Lateral septal nucleus, ventral part",144,203,237,1.0,1.0,1.0
-310,Septofimbrial nucleus,144,203,237,1.0,1.0,1.0
-333,Septohippocampal nucleus,144,203,237,1.0,1.0,1.0
-278,Striatum-like amygdalar nuclei,128,192,226,1.0,1.0,1.0
-23,Anterior amygdalar area,128,192,226,1.0,1.0,1.0
-292,Bed nucleus of the accessory olfactory tract,128,192,226,1.0,1.0,1.0
-536,Central amygdalar nucleus,128,192,226,1.0,1.0,1.0
-544,"Central amygdalar nucleus, capsular part",128,192,226,1.0,1.0,1.0
-551,"Central amygdalar nucleus, lateral part",128,192,226,1.0,1.0,1.0
-559,"Central amygdalar nucleus, medial part",128,192,226,1.0,1.0,1.0
-1105,Intercalated amygdalar nucleus,128,192,226,1.0,1.0,1.0
-403,Medial amygdalar nucleus,128,192,226,1.0,1.0,1.0
-411,"Medial amygdalar nucleus, anterodorsal part",128,192,226,1.0,1.0,1.0
-418,"Medial amygdalar nucleus, anteroventral part",128,192,226,1.0,1.0,1.0
-426,"Medial amygdalar nucleus, posterodorsal part",128,192,226,1.0,1.0,1.0
-472,"Medial amygdalar nucleus, posterodorsal part, sublayer a",128,192,226,1.0,1.0,1.0
-480,"Medial amygdalar nucleus, posterodorsal part, sublayer b",128,192,226,1.0,1.0,1.0
-487,"Medial amygdalar nucleus, posterodorsal part, sublayer c",128,192,226,1.0,1.0,1.0
-435,"Medial amygdalar nucleus, posteroventral part",128,192,226,1.0,1.0,1.0
-803,Pallidum,133,153,204,1.0,1.0,1.0
-818,"Pallidum, dorsal region",133,153,204,1.0,1.0,1.0
-1022,"Globus pallidus, external segment",133,153,204,1.0,1.0,1.0
-1031,"Globus pallidus, internal segment",133,153,204,1.0,1.0,1.0
-835,"Pallidum, ventral region",162,177,216,1.0,1.0,1.0
-342,Substantia innominata,162,177,216,1.0,1.0,1.0
-298,Magnocellular nucleus,162,177,216,1.0,1.0,1.0
-826,"Pallidum, medial region",150,167,211,1.0,1.0,1.0
-904,Medial septal complex,150,167,211,1.0,1.0,1.0
-564,Medial septal nucleus,150,167,211,1.0,1.0,1.0
-596,Diagonal band nucleus,150,167,211,1.0,1.0,1.0
-581,Triangular nucleus of septum,150,167,211,1.0,1.0,1.0
-809,"Pallidum, caudal region",179,192,223,1.0,1.0,1.0
-351,Bed nuclei of the stria terminalis,179,192,223,1.0,1.0,1.0
-359,"Bed nuclei of the stria terminalis, anterior division",179,192,223,1.0,1.0,1.0
-537,"Bed nuclei of the stria terminalis, anterior division, anterolateral area",179,192,223,1.0,1.0,1.0
-498,"Bed nuclei of the stria terminalis, anterior division, anteromedial area",179,192,223,1.0,1.0,1.0
-505,"Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus",179,192,223,1.0,1.0,1.0
-513,"Bed nuclei of the stria terminalis, anterior division, fusiform nucleus",179,192,223,1.0,1.0,1.0
-546,"Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus",179,192,223,1.0,1.0,1.0
-521,"Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus",179,192,223,1.0,1.0,1.0
-554,"Bed nuclei of the stria terminalis, anterior division, oval nucleus",179,192,223,1.0,1.0,1.0
-562,"Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus",179,192,223,1.0,1.0,1.0
-529,"Bed nuclei of the stria terminalis, anterior division, ventral nucleus",179,192,223,1.0,1.0,1.0
-367,"Bed nuclei of the stria terminalis, posterior division",179,192,223,1.0,1.0,1.0
-569,"Bed nuclei of the stria terminalis, posterior division, dorsal nucleus",179,192,223,1.0,1.0,1.0
-578,"Bed nuclei of the stria terminalis, posterior division, principal nucleus",179,192,223,1.0,1.0,1.0
-585,"Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus",179,192,223,1.0,1.0,1.0
-594,"Bed nuclei of the stria terminalis, posterior division, transverse nucleus",179,192,223,1.0,1.0,1.0
-602,"Bed nuclei of the stria terminalis, posterior division, strial extension",179,192,223,1.0,1.0,1.0
-287,Bed nucleus of the anterior commissure,179,192,223,1.0,1.0,1.0
-343,Brain stem,255,112,128,1.0,1.0,1.0
-1129,Interbrain,255,112,128,1.0,1.0,1.0
-549,Thalamus,255,112,128,1.0,1.0,1.0
-864,"Thalamus, sensory-motor cortex related",255,128,132,1.0,1.0,1.0
-637,Ventral group of the dorsal thalamus,255,128,132,1.0,1.0,1.0
-629,Ventral anterior-lateral complex of the thalamus,255,128,132,1.0,1.0,1.0
-685,Ventral medial nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-709,Ventral posterior complex of the thalamus,255,128,132,1.0,1.0,1.0
-718,Ventral posterolateral nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-725,"Ventral posterolateral nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0
-733,Ventral posteromedial nucleus of the thalamus,255,128,132,1.0,1.0,1.0
-741,"Ventral posteromedial nucleus of the thalamus, parvicellular part",255,128,132,1.0,1.0,1.0
-563807435,Posterior triangular thalamic nucleus,255,128,132,1.0,1.0,1.0
-406,Subparafascicular nucleus,255,128,132,1.0,1.0,1.0
-414,"Subparafascicular nucleus, magnocellular part",255,128,132,1.0,1.0,1.0
-422,"Subparafascicular nucleus, parvicellular part",255,128,132,1.0,1.0,1.0
-609,Subparafascicular area,255,128,132,1.0,1.0,1.0
-1044,Peripeduncular nucleus,255,128,132,1.0,1.0,1.0
-1008,"Geniculate group, dorsal thalamus",255,128,132,1.0,1.0,1.0
-475,Medial geniculate complex,255,128,132,1.0,1.0,1.0
-1072,"Medial geniculate complex, dorsal part",255,128,132,1.0,1.0,1.0
-1079,"Medial geniculate complex, ventral part",255,128,132,1.0,1.0,1.0
-1088,"Medial geniculate complex, medial part",255,128,132,1.0,1.0,1.0
-170,Dorsal part of the lateral geniculate complex,255,128,132,1.0,1.0,1.0
-496345664,"Dorsal part of the lateral geniculate complex, shell",255,128,132,1.0,1.0,1.0
-496345668,"Dorsal part of the lateral geniculate complex, core",255,128,132,1.0,1.0,1.0
-496345672,"Dorsal part of the lateral geniculate complex, ipsilateral zone",255,128,132,1.0,1.0,1.0
-856,"Thalamus, polymodal association cortex related",255,144,159,1.0,1.0,1.0
-138,Lateral group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-218,Lateral posterior nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1020,Posterior complex of the thalamus,255,144,159,1.0,1.0,1.0
-1029,Posterior limiting nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-325,Suprageniculate nucleus,255,144,159,1.0,1.0,1.0
-560581551,Ethmoid nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-560581555,Retroethmoid nucleus,255,144,159,1.0,1.0,1.0
-239,Anterior group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-255,Anteroventral nucleus of thalamus,255,144,159,1.0,1.0,1.0
-127,Anteromedial nucleus,255,144,159,1.0,1.0,1.0
-1096,"Anteromedial nucleus, dorsal part",255,144,159,1.0,1.0,1.0
-1104,"Anteromedial nucleus, ventral part",255,144,159,1.0,1.0,1.0
-64,Anterodorsal nucleus,255,144,159,1.0,1.0,1.0
-1120,Interanteromedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1113,Interanterodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-155,Lateral dorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0
-444,Medial group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-59,Intermediodorsal nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-362,Mediodorsal nucleus of thalamus,255,144,159,1.0,1.0,1.0
-617,"Mediodorsal nucleus of the thalamus, central part",255,144,159,1.0,1.0,1.0
-626,"Mediodorsal nucleus of the thalamus, lateral part",255,144,159,1.0,1.0,1.0
-636,"Mediodorsal nucleus of the thalamus, medial part",255,144,159,1.0,1.0,1.0
-366,Submedial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1077,Perireunensis nucleus,255,144,159,1.0,1.0,1.0
-571,Midline group of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-149,Paraventricular nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-15,Parataenial nucleus,255,144,159,1.0,1.0,1.0
-181,Nucleus of reuniens,255,144,159,1.0,1.0,1.0
-560581559,Xiphoid thalamic nucleus,255,144,159,1.0,1.0,1.0
-51,Intralaminar nuclei of the dorsal thalamus,255,144,159,1.0,1.0,1.0
-189,Rhomboid nucleus,255,144,159,1.0,1.0,1.0
-599,Central medial nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-907,Paracentral nucleus,255,144,159,1.0,1.0,1.0
-575,Central lateral nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-930,Parafascicular nucleus,255,144,159,1.0,1.0,1.0
-560581563,Posterior intralaminar thalamic nucleus,255,144,159,1.0,1.0,1.0
-262,Reticular nucleus of the thalamus,255,144,159,1.0,1.0,1.0
-1014,"Geniculate group, ventral thalamus",255,144,159,1.0,1.0,1.0
-27,Intergeniculate leaflet of the lateral geniculate complex,255,144,159,1.0,1.0,1.0
-563807439,Intermediate geniculate nucleus,255,144,159,1.0,1.0,1.0
-178,Ventral part of the lateral geniculate complex,255,144,159,1.0,1.0,1.0
-300,"Ventral part of the lateral geniculate complex, lateral zone",255,144,159,1.0,1.0,1.0
-316,"Ventral part of the lateral geniculate complex, medial zone",255,144,159,1.0,1.0,1.0
-321,Subgeniculate nucleus,255,144,159,1.0,1.0,1.0
-958,Epithalamus,255,144,159,1.0,1.0,1.0
-483,Medial habenula,255,144,159,1.0,1.0,1.0
-186,Lateral habenula,255,144,159,1.0,1.0,1.0
-953,Pineal body,255,144,159,1.0,1.0,1.0
-1097,Hypothalamus,230,68,56,1.0,1.0,1.0
-157,Periventricular zone,255,93,80,1.0,1.0,1.0
-390,Supraoptic nucleus,255,93,80,1.0,1.0,1.0
-332,Accessory supraoptic group,255,93,80,1.0,1.0,1.0
-432,Nucleus circularis,255,93,80,1.0,1.0,1.0
-38,Paraventricular hypothalamic nucleus,255,93,80,1.0,1.0,1.0
-71,"Paraventricular hypothalamic nucleus, magnocellular division",255,93,80,1.0,1.0,1.0
-47,"Paraventricular hypothalamic nucleus, magnocellular division, anterior magnocellular part",255,93,80,1.0,1.0,1.0
-79,"Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part",255,93,80,1.0,1.0,1.0
-103,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part",255,93,80,1.0,1.0,1.0
-652,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone",255,93,80,1.0,1.0,1.0
-660,"Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, medial zone",255,93,80,1.0,1.0,1.0
-94,"Paraventricular hypothalamic nucleus, parvicellular division",255,93,80,1.0,1.0,1.0
-55,"Paraventricular hypothalamic nucleus, parvicellular division, anterior parvicellular part",255,93,80,1.0,1.0,1.0
-87,"Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone",255,93,80,1.0,1.0,1.0
-110,"Paraventricular hypothalamic nucleus, parvicellular division, periventricular part",255,93,80,1.0,1.0,1.0
-30,"Periventricular hypothalamic nucleus, anterior part",255,93,80,1.0,1.0,1.0
-118,"Periventricular hypothalamic nucleus, intermediate part",255,93,80,1.0,1.0,1.0
-223,Arcuate hypothalamic nucleus,255,93,80,1.0,1.0,1.0
-141,Periventricular region,255,85,71,1.0,1.0,1.0
-72,Anterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0
-80,Anterior hypothalamic area,255,85,71,1.0,1.0,1.0
-263,Anteroventral preoptic nucleus,255,85,71,1.0,1.0,1.0
-272,Anteroventral periventricular nucleus,255,85,71,1.0,1.0,1.0
-830,Dorsomedial nucleus of the hypothalamus,255,85,71,1.0,1.0,1.0
-668,"Dorsomedial nucleus of the hypothalamus, anterior part",255,85,71,1.0,1.0,1.0
-676,"Dorsomedial nucleus of the hypothalamus, posterior part",255,85,71,1.0,1.0,1.0
-684,"Dorsomedial nucleus of the hypothalamus, ventral part",255,85,71,1.0,1.0,1.0
-452,Median preoptic nucleus,255,85,71,1.0,1.0,1.0
-523,Medial preoptic area,255,85,71,1.0,1.0,1.0
-763,Vascular organ of the lamina terminalis,255,85,71,1.0,1.0,1.0
-914,Posterodorsal preoptic nucleus,255,85,71,1.0,1.0,1.0
-1109,Parastrial nucleus,255,85,71,1.0,1.0,1.0
-1124,Suprachiasmatic preoptic nucleus,255,85,71,1.0,1.0,1.0
-126,"Periventricular hypothalamic nucleus, posterior part",255,85,71,1.0,1.0,1.0
-133,"Periventricular hypothalamic nucleus, preoptic part",255,85,71,1.0,1.0,1.0
-347,Subparaventricular zone,255,85,71,1.0,1.0,1.0
-286,Suprachiasmatic nucleus,255,85,71,1.0,1.0,1.0
-338,Subfornical organ,255,85,71,1.0,1.0,1.0
-576073699,Ventromedial preoptic nucleus,255,85,71,1.0,1.0,1.0
-689,Ventrolateral preoptic nucleus,255,85,71,1.0,1.0,1.0
-467,Hypothalamic medial zone,255,76,62,1.0,1.0,1.0
-88,Anterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-700,"Anterior hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0
-708,"Anterior hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0
-716,"Anterior hypothalamic nucleus, dorsal part",255,76,62,1.0,1.0,1.0
-724,"Anterior hypothalamic nucleus, posterior part",255,76,62,1.0,1.0,1.0
-331,Mammillary body,255,76,62,1.0,1.0,1.0
-210,Lateral mammillary nucleus,255,76,62,1.0,1.0,1.0
-491,Medial mammillary nucleus,255,76,62,1.0,1.0,1.0
-732,"Medial mammillary nucleus, median part",255,76,62,1.0,1.0,1.0
-606826647,"Medial mammillary nucleus, lateral part",255,76,62,1.0,1.0,1.0
-606826651,"Medial mammillary nucleus, medial part",255,76,62,1.0,1.0,1.0
-606826655,"Medial mammillary nucleus, posterior part",255,76,62,1.0,1.0,1.0
-606826659,"Medial mammillary nucleus, dorsal part",255,76,62,1.0,1.0,1.0
-525,Supramammillary nucleus,255,76,62,1.0,1.0,1.0
-1110,"Supramammillary nucleus, lateral part",255,76,62,1.0,1.0,1.0
-1118,"Supramammillary nucleus, medial part",255,76,62,1.0,1.0,1.0
-557,Tuberomammillary nucleus,255,76,62,1.0,1.0,1.0
-1126,"Tuberomammillary nucleus, dorsal part",255,76,62,1.0,1.0,1.0
-1,"Tuberomammillary nucleus, ventral part",255,76,62,1.0,1.0,1.0
-515,Medial preoptic nucleus,255,76,62,1.0,1.0,1.0
-740,"Medial preoptic nucleus, central part",255,76,62,1.0,1.0,1.0
-748,"Medial preoptic nucleus, lateral part",255,76,62,1.0,1.0,1.0
-756,"Medial preoptic nucleus, medial part",255,76,62,1.0,1.0,1.0
-980,Dorsal premammillary nucleus,255,76,62,1.0,1.0,1.0
-1004,Ventral premammillary nucleus,255,76,62,1.0,1.0,1.0
-63,"Paraventricular hypothalamic nucleus, descending division",255,76,62,1.0,1.0,1.0
-439,"Paraventricular hypothalamic nucleus, descending division, dorsal parvicellular part",255,76,62,1.0,1.0,1.0
-447,"Paraventricular hypothalamic nucleus, descending division, forniceal part",255,76,62,1.0,1.0,1.0
-455,"Paraventricular hypothalamic nucleus, descending division, lateral parvicellular part",255,76,62,1.0,1.0,1.0
-464,"Paraventricular hypothalamic nucleus, descending division, medial parvicellular part, ventral zone",255,76,62,1.0,1.0,1.0
-693,Ventromedial hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-761,"Ventromedial hypothalamic nucleus, anterior part",255,76,62,1.0,1.0,1.0
-769,"Ventromedial hypothalamic nucleus, central part",255,76,62,1.0,1.0,1.0
-777,"Ventromedial hypothalamic nucleus, dorsomedial part",255,76,62,1.0,1.0,1.0
-785,"Ventromedial hypothalamic nucleus, ventrolateral part",255,76,62,1.0,1.0,1.0
-946,Posterior hypothalamic nucleus,255,76,62,1.0,1.0,1.0
-290,Hypothalamic lateral zone,242,72,59,1.0,1.0,1.0
-194,Lateral hypothalamic area,242,72,59,1.0,1.0,1.0
-226,Lateral preoptic area,242,72,59,1.0,1.0,1.0
-356,Preparasubthalamic nucleus,242,72,59,1.0,1.0,1.0
-364,Parasubthalamic nucleus,242,72,59,1.0,1.0,1.0
-576073704,Perifornical nucleus,242,72,59,1.0,1.0,1.0
-173,Retrochiasmatic area,242,72,59,1.0,1.0,1.0
-470,Subthalamic nucleus,242,72,59,1.0,1.0,1.0
-614,Tuberal nucleus,242,72,59,1.0,1.0,1.0
-797,Zona incerta,242,72,59,1.0,1.0,1.0
-796,Dopaminergic A13 group,242,72,59,1.0,1.0,1.0
-804,Fields of Forel,242,72,59,1.0,1.0,1.0
-10671,Median eminence,242,72,59,1.0,1.0,1.0
-313,Midbrain,255,100,255,1.0,1.0,1.0
-339,"Midbrain, sensory related",255,122,255,1.0,1.0,1.0
-302,"Superior colliculus, sensory related",255,122,255,1.0,1.0,1.0
-851,"Superior colliculus, optic layer",255,122,255,1.0,1.0,1.0
-842,"Superior colliculus, superficial gray layer",255,122,255,1.0,1.0,1.0
-834,"Superior colliculus, zonal layer",255,122,255,1.0,1.0,1.0
-4,Inferior colliculus,255,122,255,1.0,1.0,1.0
-811,"Inferior colliculus, central nucleus",255,122,255,1.0,1.0,1.0
-820,"Inferior colliculus, dorsal nucleus",255,122,255,1.0,1.0,1.0
-828,"Inferior colliculus, external nucleus",255,122,255,1.0,1.0,1.0
-580,Nucleus of the brachium of the inferior colliculus,255,122,255,1.0,1.0,1.0
-271,Nucleus sagulum,255,122,255,1.0,1.0,1.0
-874,Parabigeminal nucleus,255,122,255,1.0,1.0,1.0
-460,Midbrain trigeminal nucleus,255,122,255,1.0,1.0,1.0
-599626923,Subcommissural organ,255,122,255,1.0,1.0,1.0
-323,"Midbrain, motor related",255,144,255,1.0,1.0,1.0
-381,"Substantia nigra, reticular part",255,144,255,1.0,1.0,1.0
-749,Ventral tegmental area,255,144,255,1.0,1.0,1.0
-607344830,Paranigral nucleus,255,144,255,1.0,1.0,1.0
-246,"Midbrain reticular nucleus, retrorubral area",255,144,255,1.0,1.0,1.0
-128,Midbrain reticular nucleus,255,144,255,1.0,1.0,1.0
-539,"Midbrain reticular nucleus, magnocellular part",255,144,255,1.0,1.0,1.0
-548,"Midbrain reticular nucleus, magnocellular part, general",255,144,255,1.0,1.0,1.0
-555,"Midbrain reticular nucleus, parvicellular part",255,144,255,1.0,1.0,1.0
-294,"Superior colliculus, motor related",255,144,255,1.0,1.0,1.0
-26,"Superior colliculus, motor related, deep gray layer",255,144,255,1.0,1.0,1.0
-42,"Superior colliculus, motor related, deep white layer",255,144,255,1.0,1.0,1.0
-17,"Superior colliculus, motor related, intermediate white layer",255,144,255,1.0,1.0,1.0
-10,"Superior colliculus, motor related, intermediate gray layer",255,144,255,1.0,1.0,1.0
-494,"Superior colliculus, motor related, intermediate gray layer, sublayer a",255,144,255,1.0,1.0,1.0
-503,"Superior colliculus, motor related, intermediate gray layer, sublayer b",255,144,255,1.0,1.0,1.0
-511,"Superior colliculus, motor related, intermediate gray layer, sublayer c",255,144,255,1.0,1.0,1.0
-795,Periaqueductal gray,255,144,255,1.0,1.0,1.0
-50,Precommissural nucleus,255,144,255,1.0,1.0,1.0
-67,Interstitial nucleus of Cajal,255,144,255,1.0,1.0,1.0
-587,Nucleus of Darkschewitsch,255,144,255,1.0,1.0,1.0
-614454277,Supraoculomotor periaqueductal gray,255,144,255,1.0,1.0,1.0
-1100,Pretectal region,255,144,255,1.0,1.0,1.0
-215,Anterior pretectal nucleus,255,144,255,1.0,1.0,1.0
-531,Medial pretectal area,255,144,255,1.0,1.0,1.0
-628,Nucleus of the optic tract,255,144,255,1.0,1.0,1.0
-634,Nucleus of the posterior commissure,255,144,255,1.0,1.0,1.0
-706,Olivary pretectal nucleus,255,144,255,1.0,1.0,1.0
-1061,Posterior pretectal nucleus,255,144,255,1.0,1.0,1.0
-549009203,Retroparafascicular nucleus,255,144,255,1.0,1.0,1.0
-549009207,Intercollicular nucleus,255,144,255,1.0,1.0,1.0
-616,Cuneiform nucleus,255,144,255,1.0,1.0,1.0
-214,Red nucleus,255,144,255,1.0,1.0,1.0
-35,Oculomotor nucleus,255,144,255,1.0,1.0,1.0
-549009211,Medial accesory oculomotor nucleus,255,144,255,1.0,1.0,1.0
-975,Edinger-Westphal nucleus,255,144,255,1.0,1.0,1.0
-115,Trochlear nucleus,255,144,255,1.0,1.0,1.0
-606826663,Paratrochlear nucleus,255,144,255,1.0,1.0,1.0
-757,Ventral tegmental nucleus,255,144,255,1.0,1.0,1.0
-231,Anterior tegmental nucleus,255,144,255,1.0,1.0,1.0
-66,Lateral terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-75,Dorsal terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-58,Medial terminal nucleus of the accessory optic tract,255,144,255,1.0,1.0,1.0
-615,"Substantia nigra, lateral part",255,144,255,1.0,1.0,1.0
-348,"Midbrain, behavioral state related",255,144,255,1.0,1.0,1.0
-374,"Substantia nigra, compact part",255,166,255,1.0,1.0,1.0
-1052,Pedunculopontine nucleus,255,166,255,1.0,1.0,1.0
-165,Midbrain raphe nuclei,255,166,255,1.0,1.0,1.0
-12,Interfascicular nucleus raphe,255,166,255,1.0,1.0,1.0
-100,Interpeduncular nucleus,255,166,255,1.0,1.0,1.0
-607344834,"Interpeduncular nucleus, rostral",255,166,255,1.0,1.0,1.0
-607344838,"Interpeduncular nucleus, caudal",255,166,255,1.0,1.0,1.0
-607344842,"Interpeduncular nucleus, apical",255,166,255,1.0,1.0,1.0
-607344846,"Interpeduncular nucleus, lateral",255,166,255,1.0,1.0,1.0
-607344850,"Interpeduncular nucleus, intermediate",255,166,255,1.0,1.0,1.0
-607344854,"Interpeduncular nucleus, dorsomedial",255,166,255,1.0,1.0,1.0
-607344858,"Interpeduncular nucleus, dorsolateral",255,166,255,1.0,1.0,1.0
-607344862,"Interpeduncular nucleus, rostrolateral",255,166,255,1.0,1.0,1.0
-197,Rostral linear nucleus raphe,255,166,255,1.0,1.0,1.0
-591,Central linear nucleus raphe,255,166,255,1.0,1.0,1.0
-872,Dorsal nucleus raphe,255,166,255,1.0,1.0,1.0
-1065,Hindbrain,255,155,136,1.0,1.0,1.0
-771,Pons,255,155,136,1.0,1.0,1.0
-1132,"Pons, sensory related",255,174,111,1.0,1.0,1.0
-612,Nucleus of the lateral lemniscus,255,174,111,1.0,1.0,1.0
-82,"Nucleus of the lateral lemniscus, dorsal part",255,174,111,1.0,1.0,1.0
-90,"Nucleus of the lateral lemniscus, horizontal part",255,174,111,1.0,1.0,1.0
-99,"Nucleus of the lateral lemniscus, ventral part",255,174,111,1.0,1.0,1.0
-7,Principal sensory nucleus of the trigeminal,255,174,111,1.0,1.0,1.0
-867,Parabrachial nucleus,255,174,111,1.0,1.0,1.0
-123,Koelliker-Fuse subnucleus,255,174,111,1.0,1.0,1.0
-881,"Parabrachial nucleus, lateral division",255,174,111,1.0,1.0,1.0
-860,"Parabrachial nucleus, lateral division, central lateral part",255,174,111,1.0,1.0,1.0
-868,"Parabrachial nucleus, lateral division, dorsal lateral part",255,174,111,1.0,1.0,1.0
-875,"Parabrachial nucleus, lateral division, external lateral part",255,174,111,1.0,1.0,1.0
-883,"Parabrachial nucleus, lateral division, superior lateral part",255,174,111,1.0,1.0,1.0
-891,"Parabrachial nucleus, lateral division, ventral lateral part",255,174,111,1.0,1.0,1.0
-890,"Parabrachial nucleus, medial division",255,174,111,1.0,1.0,1.0
-899,"Parabrachial nucleus, medial division, external medial part",255,174,111,1.0,1.0,1.0
-915,"Parabrachial nucleus, medial division, medial medial part",255,174,111,1.0,1.0,1.0
-923,"Parabrachial nucleus, medial division, ventral medial part",255,174,111,1.0,1.0,1.0
-398,Superior olivary complex,255,174,111,1.0,1.0,1.0
-122,"Superior olivary complex, periolivary region",255,174,111,1.0,1.0,1.0
-105,"Superior olivary complex, medial part",255,174,111,1.0,1.0,1.0
-114,"Superior olivary complex, lateral part",255,174,111,1.0,1.0,1.0
-987,"Pons, motor related",255,186,134,1.0,1.0,1.0
-280,Barrington's nucleus,255,186,134,1.0,1.0,1.0
-880,Dorsal tegmental nucleus,255,186,134,1.0,1.0,1.0
-283,Lateral tegmental nucleus,255,186,134,1.0,1.0,1.0
-599626927,Posterodorsal tegmental nucleus,255,186,134,1.0,1.0,1.0
-898,Pontine central gray,255,186,134,1.0,1.0,1.0
-931,Pontine gray,255,186,134,1.0,1.0,1.0
-1093,"Pontine reticular nucleus, caudal part",255,186,134,1.0,1.0,1.0
-552,"Pontine reticular nucleus, ventral part",255,186,134,1.0,1.0,1.0
-318,Supragenual nucleus,255,186,134,1.0,1.0,1.0
-462,Superior salivatory nucleus,255,186,134,1.0,1.0,1.0
-534,Supratrigeminal nucleus,255,186,134,1.0,1.0,1.0
-574,Tegmental reticular nucleus,255,186,134,1.0,1.0,1.0
-621,Motor nucleus of trigeminal,255,186,134,1.0,1.0,1.0
-549009215,Peritrigeminal zone,255,186,134,1.0,1.0,1.0
-549009219,Accessory trigeminal nucleus,255,186,134,1.0,1.0,1.0
-549009223,Parvicellular motor 5 nucleus,255,186,134,1.0,1.0,1.0
-549009227,Intertrigeminal nucleus,255,186,134,1.0,1.0,1.0
-1117,"Pons, behavioral state related",255,195,149,1.0,1.0,1.0
-679,Superior central nucleus raphe,255,195,149,1.0,1.0,1.0
-137,"Superior central nucleus raphe, lateral part",255,195,149,1.0,1.0,1.0
-130,"Superior central nucleus raphe, medial part",255,195,149,1.0,1.0,1.0
-147,Locus ceruleus,255,195,149,1.0,1.0,1.0
-162,Laterodorsal tegmental nucleus,255,195,149,1.0,1.0,1.0
-604,Nucleus incertus,255,195,149,1.0,1.0,1.0
-146,Pontine reticular nucleus,255,195,149,1.0,1.0,1.0
-238,Nucleus raphe pontis,255,195,149,1.0,1.0,1.0
-350,Subceruleus nucleus,255,195,149,1.0,1.0,1.0
-358,Sublaterodorsal nucleus,255,195,149,1.0,1.0,1.0
-354,Medulla,255,155,205,1.0,1.0,1.0
-386,"Medulla, sensory related",255,165,210,1.0,1.0,1.0
-207,Area postrema,255,165,210,1.0,1.0,1.0
-607,Cochlear nuclei,255,165,210,1.0,1.0,1.0
-112,Granular lamina of the cochlear nuclei,255,165,210,1.0,1.0,1.0
-560,"Cochlear nucleus, subpedunclular granular region",255,165,210,1.0,1.0,1.0
-96,Dorsal cochlear nucleus,255,165,210,1.0,1.0,1.0
-101,Ventral cochlear nucleus,255,165,210,1.0,1.0,1.0
-720,Dorsal column nuclei,255,165,210,1.0,1.0,1.0
-711,Cuneate nucleus,255,165,210,1.0,1.0,1.0
-1039,Gracile nucleus,255,165,210,1.0,1.0,1.0
-903,External cuneate nucleus,255,165,210,1.0,1.0,1.0
-642,Nucleus of the trapezoid body,255,165,210,1.0,1.0,1.0
-651,Nucleus of the solitary tract,255,165,210,1.0,1.0,1.0
-659,"Nucleus of the solitary tract, central part",255,165,210,1.0,1.0,1.0
-666,"Nucleus of the solitary tract, commissural part",255,165,210,1.0,1.0,1.0
-674,"Nucleus of the solitary tract, gelatinous part",255,165,210,1.0,1.0,1.0
-682,"Nucleus of the solitary tract, lateral part",255,165,210,1.0,1.0,1.0
-691,"Nucleus of the solitary tract, medial part",255,165,210,1.0,1.0,1.0
-429,"Spinal nucleus of the trigeminal, caudal part",255,165,210,1.0,1.0,1.0
-437,"Spinal nucleus of the trigeminal, interpolar part",255,165,210,1.0,1.0,1.0
-445,"Spinal nucleus of the trigeminal, oral part",255,165,210,1.0,1.0,1.0
-77,"Spinal nucleus of the trigeminal, oral part, caudal dorsomedial part",255,165,210,1.0,1.0,1.0
-53,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, dorsal zone",255,165,210,1.0,1.0,1.0
-61,"Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone",255,165,210,1.0,1.0,1.0
-45,"Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part",255,165,210,1.0,1.0,1.0
-69,"Spinal nucleus of the trigeminal, oral part, ventrolateral part",255,165,210,1.0,1.0,1.0
-589508451,Paratrigeminal nucleus,255,165,210,1.0,1.0,1.0
-789,Nucleus z,255,165,210,1.0,1.0,1.0
-370,"Medulla, motor related",255,179,217,1.0,1.0,1.0
-653,Abducens nucleus,255,179,217,1.0,1.0,1.0
-568,Accessory abducens nucleus,255,179,217,1.0,1.0,1.0
-661,Facial motor nucleus,255,179,217,1.0,1.0,1.0
-576,Accessory facial motor nucleus,255,179,217,1.0,1.0,1.0
-640,Efferent vestibular nucleus,255,179,217,1.0,1.0,1.0
-135,Nucleus ambiguus,255,179,217,1.0,1.0,1.0
-939,"Nucleus ambiguus, dorsal division",255,179,217,1.0,1.0,1.0
-143,"Nucleus ambiguus, ventral division",255,179,217,1.0,1.0,1.0
-839,Dorsal motor nucleus of the vagus nerve,255,179,217,1.0,1.0,1.0
-887,Efferent cochlear group,255,179,217,1.0,1.0,1.0
-1048,Gigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-372,Infracerebellar nucleus,255,179,217,1.0,1.0,1.0
-83,Inferior olivary complex,255,179,217,1.0,1.0,1.0
-136,Intermediate reticular nucleus,255,179,217,1.0,1.0,1.0
-106,Inferior salivatory nucleus,255,179,217,1.0,1.0,1.0
-203,Linear nucleus of the medulla,255,179,217,1.0,1.0,1.0
-235,Lateral reticular nucleus,255,179,217,1.0,1.0,1.0
-955,"Lateral reticular nucleus, magnocellular part",255,179,217,1.0,1.0,1.0
-963,"Lateral reticular nucleus, parvicellular part",255,179,217,1.0,1.0,1.0
-307,Magnocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-395,Medullary reticular nucleus,255,179,217,1.0,1.0,1.0
-1098,"Medullary reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0
-1107,"Medullary reticular nucleus, ventral part",255,179,217,1.0,1.0,1.0
-852,Parvicellular reticular nucleus,255,179,217,1.0,1.0,1.0
-859,Parasolitary nucleus,255,179,217,1.0,1.0,1.0
-938,Paragigantocellular reticular nucleus,255,179,217,1.0,1.0,1.0
-970,"Paragigantocellular reticular nucleus, dorsal part",255,179,217,1.0,1.0,1.0
-978,"Paragigantocellular reticular nucleus, lateral part",255,179,217,1.0,1.0,1.0
-154,Perihypoglossal nuclei,255,179,217,1.0,1.0,1.0
-161,Nucleus intercalatus,255,179,217,1.0,1.0,1.0
-177,Nucleus of Roller,255,179,217,1.0,1.0,1.0
-169,Nucleus prepositus,255,179,217,1.0,1.0,1.0
-995,Paramedian reticular nucleus,255,179,217,1.0,1.0,1.0
-1069,Parapyramidal nucleus,255,179,217,1.0,1.0,1.0
-185,"Parapyramidal nucleus, deep part",255,179,217,1.0,1.0,1.0
-193,"Parapyramidal nucleus, superficial part",255,179,217,1.0,1.0,1.0
-701,Vestibular nuclei,255,179,217,1.0,1.0,1.0
-209,Lateral vestibular nucleus,255,179,217,1.0,1.0,1.0
-202,Medial vestibular nucleus,255,179,217,1.0,1.0,1.0
-225,Spinal vestibular nucleus,255,179,217,1.0,1.0,1.0
-217,Superior vestibular nucleus,255,179,217,1.0,1.0,1.0
-765,Nucleus x,255,179,217,1.0,1.0,1.0
-773,Hypoglossal nucleus,255,179,217,1.0,1.0,1.0
-781,Nucleus y,255,179,217,1.0,1.0,1.0
-76,Interstitial nucleus of the vestibular nerve,255,179,217,1.0,1.0,1.0
-379,"Medulla, behavioral state related",255,198,226,1.0,1.0,1.0
-206,Nucleus raphe magnus,255,198,226,1.0,1.0,1.0
-230,Nucleus raphe pallidus,255,198,226,1.0,1.0,1.0
-222,Nucleus raphe obscurus,255,198,226,1.0,1.0,1.0
-512,Cerebellum,240,240,128,1.0,1.0,1.0
-528,Cerebellar cortex,240,240,128,1.0,1.0,1.0
-1144,"Cerebellar cortex, molecular layer",255,252,145,1.0,1.0,1.0
-1145,"Cerebellar cortex, Purkinje layer",255,252,145,1.0,1.0,1.0
-1143,"Cerebellar cortex, granular layer",236,231,84,1.0,1.0,1.0
-645,Vermal regions,255,252,145,1.0,1.0,1.0
-912,Lingula (I),255,252,145,1.0,1.0,1.0
-10707,"Lingula (I), molecular layer",255,252,145,1.0,1.0,1.0
-10706,"Lingula (I), Purkinje layer",255,252,145,1.0,1.0,1.0
-10705,"Lingula (I), granular layer",236,231,84,1.0,1.0,1.0
-920,Central lobule,255,252,145,1.0,1.0,1.0
-976,Lobule II,255,252,145,1.0,1.0,1.0
-10710,"Lobule II, molecular layer",255,252,145,1.0,1.0,1.0
-10709,"Lobule II, Purkinje layer",255,252,145,1.0,1.0,1.0
-10708,"Lobule II, granular layer",236,231,84,1.0,1.0,1.0
-984,Lobule III,255,252,145,1.0,1.0,1.0
-10713,"Lobule III, molecular layer",255,252,145,1.0,1.0,1.0
-10712,"Lobule III, Purkinje layer",255,252,145,1.0,1.0,1.0
-10711,"Lobule III, granular layer",236,231,84,1.0,1.0,1.0
-928,Culmen,255,252,145,1.0,1.0,1.0
-992,Lobule IV,255,252,145,1.0,1.0,1.0
-10716,"Lobule IV, molecular layer",255,252,145,1.0,1.0,1.0
-10715,"Lobule IV, Purkinje layer",255,252,145,1.0,1.0,1.0
-10714,"Lobule IV, granular layer",236,231,84,1.0,1.0,1.0
-1001,Lobule V,255,252,145,1.0,1.0,1.0
-10719,"Lobule V, molecular layer",255,252,145,1.0,1.0,1.0
-10718,"Lobule V, Purkinje layer",255,252,145,1.0,1.0,1.0
-10717,"Lobule V, granular layer",236,231,84,1.0,1.0,1.0
-1091,Lobules IV-V,255,252,145,1.0,1.0,1.0
-10722,"Lobules IV-V, molecular layer",255,252,145,1.0,1.0,1.0
-10721,"Lobules IV-V, Purkinje layer",255,252,145,1.0,1.0,1.0
-10720,"Lobules IV-V, granular layer",236,231,84,1.0,1.0,1.0
-936,Declive (VI),255,252,145,1.0,1.0,1.0
-10725,"Declive (VI), molecular layer",255,252,145,1.0,1.0,1.0
-10724,"Declive (VI), Purkinje layer",255,252,145,1.0,1.0,1.0
-10723,"Declive (VI), granular layer",236,231,84,1.0,1.0,1.0
-944,Folium-tuber vermis (VII),255,252,145,1.0,1.0,1.0
-10728,"Folium-tuber vermis (VII), molecular layer",255,252,145,1.0,1.0,1.0
-10727,"Folium-tuber vermis (VII), Purkinje layer",255,252,145,1.0,1.0,1.0
-10726,"Folium-tuber vermis (VII), granular layer",236,231,84,1.0,1.0,1.0
-951,Pyramus (VIII),255,252,145,1.0,1.0,1.0
-10731,"Pyramus (VIII), molecular layer",255,252,145,1.0,1.0,1.0
-10730,"Pyramus (VIII), Purkinje layer",255,252,145,1.0,1.0,1.0
-10729,"Pyramus (VIII), granular layer",236,231,84,1.0,1.0,1.0
-957,Uvula (IX),255,252,145,1.0,1.0,1.0
-10734,"Uvula (IX), molecular layer",255,252,145,1.0,1.0,1.0
-10733,"Uvula (IX), Purkinje layer",255,252,145,1.0,1.0,1.0
-10732,"Uvula (IX), granular layer",236,231,84,1.0,1.0,1.0
-968,Nodulus (X),255,252,145,1.0,1.0,1.0
-10737,"Nodulus (X), molecular layer",255,252,145,1.0,1.0,1.0
-10736,"Nodulus (X), Purkinje layer",255,252,145,1.0,1.0,1.0
-10735,"Nodulus (X), granular layer",236,231,84,1.0,1.0,1.0
-1073,Hemispheric regions,255,252,145,1.0,1.0,1.0
-1007,Simple lobule,255,252,145,1.0,1.0,1.0
-10674,"Simple lobule, molecular layer",255,252,145,1.0,1.0,1.0
-10673,"Simple lobule, Purkinje layer",255,252,145,1.0,1.0,1.0
-10672,"Simple lobule, granular layer",236,231,84,1.0,1.0,1.0
-1017,Ansiform lobule,255,252,145,1.0,1.0,1.0
-1056,Crus 1,255,252,145,1.0,1.0,1.0
-10677,"Crus 1, molecular layer",255,252,145,1.0,1.0,1.0
-10676,"Crus 1, Purkinje layer",255,252,145,1.0,1.0,1.0
-10675,"Crus 1, granular layer",236,231,84,1.0,1.0,1.0
-1064,Crus 2,255,252,145,1.0,1.0,1.0
-10680,"Crus 2, molecular layer",255,252,145,1.0,1.0,1.0
-10679,"Crus 2, Purkinje layer",255,252,145,1.0,1.0,1.0
-10678,"Crus 2, granular layer",236,231,84,1.0,1.0,1.0
-1025,Paramedian lobule,255,252,145,1.0,1.0,1.0
-10683,"Paramedian lobule, molecular layer",255,252,145,1.0,1.0,1.0
-10682,"Paramedian lobule, Purkinje layer",255,252,145,1.0,1.0,1.0
-10681,"Paramedian lobule, granular layer",236,231,84,1.0,1.0,1.0
-1033,Copula pyramidis,255,252,145,1.0,1.0,1.0
-10686,"Copula pyramidis, molecular layer",255,252,145,1.0,1.0,1.0
-10685,"Copula pyramidis, Purkinje layer",255,252,145,1.0,1.0,1.0
-10684,"Copula pyramidis, granular layer",236,231,84,1.0,1.0,1.0
-1041,Paraflocculus,255,252,145,1.0,1.0,1.0
-10689,"Paraflocculus, molecular layer",255,252,145,1.0,1.0,1.0
-10688,"Paraflocculus, Purkinje layer",255,252,145,1.0,1.0,1.0
-10687,"Paraflocculus, granular layer",236,231,84,1.0,1.0,1.0
-1049,Flocculus,255,252,145,1.0,1.0,1.0
-10692,"Flocculus, molecular layer",255,252,145,1.0,1.0,1.0
-10691,"Flocculus, Purkinje layer",255,252,145,1.0,1.0,1.0
-10690,"Flocculus, granular layer",236,231,84,1.0,1.0,1.0
-519,Cerebellar nuclei,240,240,128,1.0,1.0,1.0
-989,Fastigial nucleus,255,253,188,1.0,1.0,1.0
-91,Interposed nucleus,255,253,188,1.0,1.0,1.0
-846,Dentate nucleus,255,253,188,1.0,1.0,1.0
-589508455,Vestibulocerebellar nucleus,255,253,188,1.0,1.0,1.0
-1009,fiber tracts,204,204,204,1.0,1.0,1.0
-967,cranial nerves,204,204,204,1.0,1.0,1.0
-885,terminal nerve,204,204,204,1.0,1.0,1.0
-949,vomeronasal nerve,204,204,204,1.0,1.0,1.0
-840,olfactory nerve,204,204,204,1.0,1.0,1.0
-1016,olfactory nerve layer of main olfactory bulb,204,204,204,1.0,1.0,1.0
-21,"lateral olfactory tract, general",204,204,204,1.0,1.0,1.0
-665,"lateral olfactory tract, body",204,204,204,1.0,1.0,1.0
-538,dorsal limb,204,204,204,1.0,1.0,1.0
-459,accessory olfactory tract,204,204,204,1.0,1.0,1.0
-900,"anterior commissure, olfactory limb",204,204,204,1.0,1.0,1.0
-848,optic nerve,204,204,204,1.0,1.0,1.0
-876,accessory optic tract,204,204,204,1.0,1.0,1.0
-916,brachium of the superior colliculus,204,204,204,1.0,1.0,1.0
-336,superior colliculus commissure,204,204,204,1.0,1.0,1.0
-117,optic chiasm,204,204,204,1.0,1.0,1.0
-125,optic tract,204,204,204,1.0,1.0,1.0
-357,tectothalamic pathway,204,204,204,1.0,1.0,1.0
-832,oculomotor nerve,204,204,204,1.0,1.0,1.0
-62,medial longitudinal fascicle,204,204,204,1.0,1.0,1.0
-158,posterior commissure,204,204,204,1.0,1.0,1.0
-911,trochlear nerve,204,204,204,1.0,1.0,1.0
-384,trochlear nerve decussation,204,204,204,1.0,1.0,1.0
-710,abducens nerve,204,204,204,1.0,1.0,1.0
-901,trigeminal nerve,204,204,204,1.0,1.0,1.0
-93,motor root of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-229,sensory root of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-705,midbrain tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-794,spinal tract of the trigeminal nerve,204,204,204,1.0,1.0,1.0
-798,facial nerve,204,204,204,1.0,1.0,1.0
-1131,intermediate nerve,204,204,204,1.0,1.0,1.0
-1116,genu of the facial nerve,204,204,204,1.0,1.0,1.0
-933,vestibulocochlear nerve,204,204,204,1.0,1.0,1.0
-1076,efferent cochleovestibular bundle,204,204,204,1.0,1.0,1.0
-413,vestibular nerve,204,204,204,1.0,1.0,1.0
-948,cochlear nerve,204,204,204,1.0,1.0,1.0
-841,trapezoid body,204,204,204,1.0,1.0,1.0
-641,intermediate acoustic stria,204,204,204,1.0,1.0,1.0
-506,dorsal acoustic stria,204,204,204,1.0,1.0,1.0
-658,lateral lemniscus,204,204,204,1.0,1.0,1.0
-633,inferior colliculus commissure,204,204,204,1.0,1.0,1.0
-482,brachium of the inferior colliculus,204,204,204,1.0,1.0,1.0
-808,glossopharyngeal nerve,204,204,204,1.0,1.0,1.0
-917,vagus nerve,204,204,204,1.0,1.0,1.0
-237,solitary tract,204,204,204,1.0,1.0,1.0
-717,accessory spinal nerve,204,204,204,1.0,1.0,1.0
-813,hypoglossal nerve,204,204,204,1.0,1.0,1.0
-925,ventral roots,204,204,204,1.0,1.0,1.0
-792,dorsal roots,204,204,204,1.0,1.0,1.0
-932,cervicothalamic tract,204,204,204,1.0,1.0,1.0
-570,dorsolateral fascicle,204,204,204,1.0,1.0,1.0
-522,dorsal commissure of the spinal cord,204,204,204,1.0,1.0,1.0
-858,ventral commissure of the spinal cord,204,204,204,1.0,1.0,1.0
-586,fasciculus proprius,204,204,204,1.0,1.0,1.0
-514,dorsal column,204,204,204,1.0,1.0,1.0
-380,cuneate fascicle,204,204,204,1.0,1.0,1.0
-388,gracile fascicle,204,204,204,1.0,1.0,1.0
-396,internal arcuate fibers,204,204,204,1.0,1.0,1.0
-697,medial lemniscus,204,204,204,1.0,1.0,1.0
-871,spinothalamic tract,204,204,204,1.0,1.0,1.0
-29,lateral spinothalamic tract,204,204,204,1.0,1.0,1.0
-389,ventral spinothalamic tract,204,204,204,1.0,1.0,1.0
-245,spinocervical tract,204,204,204,1.0,1.0,1.0
-261,spino-olivary pathway,204,204,204,1.0,1.0,1.0
-270,spinoreticular pathway,204,204,204,1.0,1.0,1.0
-293,spinovestibular pathway,204,204,204,1.0,1.0,1.0
-277,spinotectal pathway,204,204,204,1.0,1.0,1.0
-253,spinohypothalamic pathway,204,204,204,1.0,1.0,1.0
-285,spinotelenchephalic pathway,204,204,204,1.0,1.0,1.0
-627,hypothalamohypophysial tract,204,204,204,1.0,1.0,1.0
-960,cerebellum related fiber tracts,204,204,204,1.0,1.0,1.0
-744,cerebellar commissure,204,204,204,1.0,1.0,1.0
-752,cerebellar peduncles,204,204,204,1.0,1.0,1.0
-326,superior cerebelar peduncles,204,204,204,1.0,1.0,1.0
-812,superior cerebellar peduncle decussation,204,204,204,1.0,1.0,1.0
-85,spinocerebellar tract,204,204,204,1.0,1.0,1.0
-850,uncinate fascicle,204,204,204,1.0,1.0,1.0
-866,ventral spinocerebellar tract,204,204,204,1.0,1.0,1.0
-78,middle cerebellar peduncle,204,204,204,1.0,1.0,1.0
-1123,inferior cerebellar peduncle,204,204,204,1.0,1.0,1.0
-553,dorsal spinocerebellar tract,204,204,204,1.0,1.0,1.0
-499,cuneocerebellar tract,204,204,204,1.0,1.0,1.0
-650,juxtarestiform body,204,204,204,1.0,1.0,1.0
-490,bulbocerebellar tract,204,204,204,1.0,1.0,1.0
-404,olivocerebellar tract,204,204,204,1.0,1.0,1.0
-410,reticulocerebellar tract,204,204,204,1.0,1.0,1.0
-373,trigeminocerebellar tract,204,204,204,1.0,1.0,1.0
-728,arbor vitae,204,204,204,1.0,1.0,1.0
-484682512,supra-callosal cerebral white matter,204,204,204,1.0,1.0,1.0
-983,lateral forebrain bundle system,204,204,204,1.0,1.0,1.0
-776,corpus callosum,204,204,204,1.0,1.0,1.0
-956,"corpus callosum, anterior forceps",204,204,204,1.0,1.0,1.0
-579,external capsule,204,204,204,1.0,1.0,1.0
-964,"corpus callosum, extreme capsule",204,204,204,1.0,1.0,1.0
-1108,genu of corpus callosum,204,204,204,1.0,1.0,1.0
-971,"corpus callosum, posterior forceps",204,204,204,1.0,1.0,1.0
-979,"corpus callosum, rostrum",204,204,204,1.0,1.0,1.0
-484682516,"corpus callosum, body",204,204,204,1.0,1.0,1.0
-986,"corpus callosum, splenium",204,204,204,1.0,1.0,1.0
-784,corticospinal tract,204,204,204,1.0,1.0,1.0
-6,internal capsule,204,204,204,1.0,1.0,1.0
-924,cerebal peduncle,204,204,204,1.0,1.0,1.0
-1036,corticotectal tract,204,204,204,1.0,1.0,1.0
-1012,corticorubral tract,204,204,204,1.0,1.0,1.0
-1003,corticopontine tract,204,204,204,1.0,1.0,1.0
-994,corticobulbar tract,204,204,204,1.0,1.0,1.0
-190,pyramid,204,204,204,1.0,1.0,1.0
-198,pyramidal decussation,204,204,204,1.0,1.0,1.0
-1019,"corticospinal tract, crossed",204,204,204,1.0,1.0,1.0
-1028,"corticospinal tract, uncrossed",204,204,204,1.0,1.0,1.0
-896,thalamus related,204,204,204,1.0,1.0,1.0
-1092,external medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0
-14,internal medullary lamina of the thalamus,204,204,204,1.0,1.0,1.0
-86,middle thalamic commissure,204,204,204,1.0,1.0,1.0
-365,thalamic peduncles,204,204,204,1.0,1.0,1.0
-484682520,optic radiation,204,204,204,1.0,1.0,1.0
-484682524,auditory radiation,204,204,204,1.0,1.0,1.0
-1000,extrapyramidal fiber systems,204,204,204,1.0,1.0,1.0
-760,cerebral nuclei related,204,204,204,1.0,1.0,1.0
-142,pallidothalamic pathway,204,204,204,1.0,1.0,1.0
-102,nigrostriatal tract,204,204,204,1.0,1.0,1.0
-109,nigrothalamic fibers,204,204,204,1.0,1.0,1.0
-134,pallidotegmental fascicle,204,204,204,1.0,1.0,1.0
-309,striatonigral pathway,204,204,204,1.0,1.0,1.0
-317,subthalamic fascicle,204,204,204,1.0,1.0,1.0
-877,tectospinal pathway,204,204,204,1.0,1.0,1.0
-1051,direct tectospinal pathway,204,204,204,1.0,1.0,1.0
-1060,doral tegmental decussation,204,204,204,1.0,1.0,1.0
-1043,crossed tectospinal pathway,204,204,204,1.0,1.0,1.0
-863,rubrospinal tract,204,204,204,1.0,1.0,1.0
-397,ventral tegmental decussation,204,204,204,1.0,1.0,1.0
-221,rubroreticular tract,204,204,204,1.0,1.0,1.0
-736,central tegmental bundle,204,204,204,1.0,1.0,1.0
-855,retriculospinal tract,204,204,204,1.0,1.0,1.0
-205,"retriculospinal tract, lateral part",204,204,204,1.0,1.0,1.0
-213,"retriculospinal tract, medial part",204,204,204,1.0,1.0,1.0
-941,vestibulospinal pathway,204,204,204,1.0,1.0,1.0
-991,medial forebrain bundle system,204,204,204,1.0,1.0,1.0
-768,cerebrum related,204,204,204,1.0,1.0,1.0
-884,amygdalar capsule,204,204,204,1.0,1.0,1.0
-892,ansa peduncularis,204,204,204,1.0,1.0,1.0
-908,"anterior commissure, temporal limb",204,204,204,1.0,1.0,1.0
-940,cingulum bundle,204,204,204,1.0,1.0,1.0
-1099,fornix system,204,204,204,1.0,1.0,1.0
-466,alveus,204,204,204,1.0,1.0,1.0
-530,dorsal fornix,204,204,204,1.0,1.0,1.0
-603,fimbria,204,204,204,1.0,1.0,1.0
-745,"precommissural fornix, general",204,204,204,1.0,1.0,1.0
-420,precommissural fornix diagonal band,204,204,204,1.0,1.0,1.0
-737,postcommissural fornix,204,204,204,1.0,1.0,1.0
-428,medial corticohypothalamic tract,204,204,204,1.0,1.0,1.0
-436,columns of the fornix,204,204,204,1.0,1.0,1.0
-618,hippocampal commissures,204,204,204,1.0,1.0,1.0
-443,dorsal hippocampal commissure,204,204,204,1.0,1.0,1.0
-449,ventral hippocampal commissure,204,204,204,1.0,1.0,1.0
-713,perforant path,204,204,204,1.0,1.0,1.0
-474,angular path,204,204,204,1.0,1.0,1.0
-37,longitudinal association bundle,204,204,204,1.0,1.0,1.0
-301,stria terminalis,204,204,204,1.0,1.0,1.0
-484682528,commissural branch of stria terminalis,204,204,204,1.0,1.0,1.0
-824,hypothalamus related,204,204,204,1.0,1.0,1.0
-54,medial forebrain bundle,204,204,204,1.0,1.0,1.0
-405,ventrolateral hypothalamic tract,204,204,204,1.0,1.0,1.0
-174,preoptic commissure,204,204,204,1.0,1.0,1.0
-349,supraoptic commissures,204,204,204,1.0,1.0,1.0
-817,"supraoptic commissures, anterior",204,204,204,1.0,1.0,1.0
-825,"supraoptic commissures, dorsal",204,204,204,1.0,1.0,1.0
-833,"supraoptic commissures, ventral",204,204,204,1.0,1.0,1.0
-166,premammillary commissure,204,204,204,1.0,1.0,1.0
-341,supramammillary decussation,204,204,204,1.0,1.0,1.0
-182,propriohypothalamic pathways,204,204,204,1.0,1.0,1.0
-762,"propriohypothalamic pathways, dorsal",204,204,204,1.0,1.0,1.0
-770,"propriohypothalamic pathways, lateral",204,204,204,1.0,1.0,1.0
-779,"propriohypothalamic pathways, medial",204,204,204,1.0,1.0,1.0
-787,"propriohypothalamic pathways, ventral",204,204,204,1.0,1.0,1.0
-150,periventricular bundle of the hypothalamus,204,204,204,1.0,1.0,1.0
-46,mammillary related,204,204,204,1.0,1.0,1.0
-753,principal mammillary tract,204,204,204,1.0,1.0,1.0
-690,mammillothalamic tract,204,204,204,1.0,1.0,1.0
-681,mammillotegmental tract,204,204,204,1.0,1.0,1.0
-673,mammillary peduncle,204,204,204,1.0,1.0,1.0
-1068,dorsal thalamus related,204,204,204,1.0,1.0,1.0
-722,periventricular bundle of the thalamus,204,204,204,1.0,1.0,1.0
-1083,epithalamus related,204,204,204,1.0,1.0,1.0
-802,stria medullaris,204,204,204,1.0,1.0,1.0
-595,fasciculus retroflexus,204,204,204,1.0,1.0,1.0
-611,habenular commissure,204,204,204,1.0,1.0,1.0
-730,pineal stalk,204,204,204,1.0,1.0,1.0
-70,midbrain related,204,204,204,1.0,1.0,1.0
-547,dorsal longitudinal fascicle,204,204,204,1.0,1.0,1.0
-563,dorsal tegmental tract,204,204,204,1.0,1.0,1.0
-73,ventricular systems,170,170,170,1.0,1.0,1.0
-81,lateral ventricle,170,170,170,1.0,1.0,1.0
-89,rhinocele,170,170,170,1.0,1.0,1.0
-98,subependymal zone,170,170,170,1.0,1.0,1.0
-108,choroid plexus,170,170,170,1.0,1.0,1.0
-116,choroid fissure,170,170,170,1.0,1.0,1.0
-124,interventricular foramen,170,170,170,1.0,1.0,1.0
-129,third ventricle,170,170,170,1.0,1.0,1.0
-140,cerebral aqueduct,170,170,170,1.0,1.0,1.0
-145,fourth ventricle,170,170,170,1.0,1.0,1.0
-153,lateral recess,170,170,170,1.0,1.0,1.0
-164,"central canal, spinal cord/medulla",170,170,170,1.0,1.0,1.0
-1024,grooves,170,170,170,1.0,1.0,1.0
-1032,grooves of the cerebral cortex,170,170,170,1.0,1.0,1.0
-1055,endorhinal groove,170,170,170,1.0,1.0,1.0
-1063,hippocampal fissure,170,170,170,1.0,1.0,1.0
-1071,rhinal fissure,170,170,170,1.0,1.0,1.0
-1078,rhinal incisure,170,170,170,1.0,1.0,1.0
-1040,grooves of the cerebellar cortex,170,170,170,1.0,1.0,1.0
-1087,precentral fissure,170,170,170,1.0,1.0,1.0
-1095,preculminate fissure,170,170,170,1.0,1.0,1.0
-1103,primary fissure,170,170,170,1.0,1.0,1.0
-1112,posterior superior fissure,170,170,170,1.0,1.0,1.0
-1119,prepyramidal fissure,170,170,170,1.0,1.0,1.0
-3,secondary fissure,170,170,170,1.0,1.0,1.0
-11,posterolateral fissure,170,170,170,1.0,1.0,1.0
-18,nodular fissure,170,170,170,1.0,1.0,1.0
-25,simple fissure,170,170,170,1.0,1.0,1.0
-34,intercrural fissure,170,170,170,1.0,1.0,1.0
-43,ansoparamedian fissure,170,170,170,1.0,1.0,1.0
-49,intraparafloccular fissure,170,170,170,1.0,1.0,1.0
-57,paramedian sulcus,170,170,170,1.0,1.0,1.0
-65,parafloccular sulcus,170,170,170,1.0,1.0,1.0
-624,Interpeduncular fossa,170,170,170,1.0,1.0,1.0
-304325711,retina,127,46,126,1.0,1.0,1.0
diff --git a/annotation_volumes/allen2022_colours.csv b/annotation_volumes/allen2022_colours.csv
deleted file mode 100644
index 87adaff790da3a35225e5ce960a668826d6d0df9..0000000000000000000000000000000000000000
--- a/annotation_volumes/allen2022_colours.csv
+++ /dev/null
@@ -1,1329 +0,0 @@
-id,r,g,b,1a,1b,1c,name,allenID
-1.0,97,23,22,1.0,1.0,1.0,TMv,1
-2.0,124,100,148,1.0,1.0,1.0,SSp-m6b,2
-3.0,45,110,140,1.0,1.0,1.0,sec,3
-4.0,87,181,14,1.0,1.0,1.0,IC,4
-5.0,11,248,9,1.0,1.0,1.0,int,6
-6.0,111,208,94,1.0,1.0,1.0,PSV,7
-7.0,9,47,174,1.0,1.0,1.0,grey,8
-8.0,162,233,124,1.0,1.0,1.0,SSp-tr6a,9
-9.0,55,139,65,1.0,1.0,1.0,SCig,10
-10.0,196,102,20,1.0,1.0,1.0,plf,11
-11.0,89,55,43,1.0,1.0,1.0,IF,12
-12.0,226,85,176,1.0,1.0,1.0,im,14
-13.0,23,10,250,1.0,1.0,1.0,PT,15
-14.0,237,48,27,1.0,1.0,1.0,6b,16
-15.0,197,147,134,1.0,1.0,1.0,SCiw,17
-16.0,64,107,196,1.0,1.0,1.0,nf,18
-17.0,159,28,70,1.0,1.0,1.0,IG,19
-18.0,61,70,91,1.0,1.0,1.0,ENTl2,20
-19.0,164,16,39,1.0,1.0,1.0,lotg,21
-20.0,135,229,117,1.0,1.0,1.0,PTLp,22
-21.0,158,58,212,1.0,1.0,1.0,AAA,23
-22.0,232,190,191,1.0,1.0,1.0,sif,25
-23.0,13,191,132,1.0,1.0,1.0,SCdg,26
-24.0,30,250,64,1.0,1.0,1.0,IGL,27
-25.0,37,198,60,1.0,1.0,1.0,ENTl6a,28
-26.0,65,80,126,1.0,1.0,1.0,sttl,29
-27.0,14,70,220,1.0,1.0,1.0,PVa,30
-28.0,234,26,106,1.0,1.0,1.0,ACA,31
-29.0,249,90,133,1.0,1.0,1.0,VISp6a,33
-30.0,149,96,29,1.0,1.0,1.0,icf,34
-31.0,191,86,92,1.0,1.0,1.0,III,35
-32.0,193,47,29,1.0,1.0,1.0,GU1,36
-33.0,239,115,75,1.0,1.0,1.0,lab,37
-34.0,36,221,231,1.0,1.0,1.0,PVH,38
-35.0,28,233,97,1.0,1.0,1.0,ACAd,39
-36.0,84,162,142,1.0,1.0,1.0,VISpm2/3,41
-37.0,2,53,79,1.0,1.0,1.0,SCdw,42
-38.0,187,8,16,1.0,1.0,1.0,apf,43
-39.0,77,214,145,1.0,1.0,1.0,ILA,44
-40.0,189,214,193,1.0,1.0,1.0,SPVOrdm,45
-41.0,79,233,75,1.0,1.0,1.0,mfbsma,46
-42.0,193,119,121,1.0,1.0,1.0,PVHam,47
-43.0,75,115,20,1.0,1.0,1.0,ACAv,48
-44.0,58,42,224,1.0,1.0,1.0,ipf,49
-45.0,127,0,110,1.0,1.0,1.0,PRC,50
-46.0,217,219,143,1.0,1.0,1.0,ILM,51
-47.0,94,85,58,1.0,1.0,1.0,ENTl3,52
-48.0,95,147,238,1.0,1.0,1.0,SPVOmdmd,53
-49.0,87,204,113,1.0,1.0,1.0,mfb,54
-50.0,118,196,53,1.0,1.0,1.0,PVHap,55
-51.0,99,31,240,1.0,1.0,1.0,ACB,56
-52.0,199,229,136,1.0,1.0,1.0,pms,57
-53.0,202,78,239,1.0,1.0,1.0,MT,58
-54.0,177,255,94,1.0,1.0,1.0,IMD,59
-55.0,251,248,121,1.0,1.0,1.0,ENTl6b,60
-56.0,83,129,1,1.0,1.0,1.0,SPVOmdmv,61
-57.0,235,49,142,1.0,1.0,1.0,mlf,62
-58.0,227,63,44,1.0,1.0,1.0,PVHd,63
-59.0,61,50,114,1.0,1.0,1.0,AD,64
-60.0,199,170,212,1.0,1.0,1.0,pfs,65
-61.0,20,210,130,1.0,1.0,1.0,LT,66
-62.0,110,227,169,1.0,1.0,1.0,INC,67
-63.0,172,12,193,1.0,1.0,1.0,FRP1,68
-64.0,18,112,237,1.0,1.0,1.0,SPVOvl,69
-65.0,37,126,224,1.0,1.0,1.0,mfbsm,70
-66.0,182,59,39,1.0,1.0,1.0,PVHm,71
-67.0,53,5,82,1.0,1.0,1.0,ADP,72
-68.0,140,103,8,1.0,1.0,1.0,VS,73
-69.0,245,134,133,1.0,1.0,1.0,VISl6a,74
-70.0,101,25,79,1.0,1.0,1.0,DT,75
-71.0,64,234,248,1.0,1.0,1.0,INV,76
-72.0,171,232,169,1.0,1.0,1.0,SPVOcdm,77
-73.0,64,80,201,1.0,1.0,1.0,mcp,78
-74.0,35,81,88,1.0,1.0,1.0,PVHmm,79
-75.0,136,40,170,1.0,1.0,1.0,AHA,80
-76.0,139,93,19,1.0,1.0,1.0,VL,81
-77.0,67,30,15,1.0,1.0,1.0,NLLd,82
-78.0,200,6,1,1.0,1.0,1.0,IO,83
-79.0,113,217,200,1.0,1.0,1.0,PL6a,84
-80.0,95,95,52,1.0,1.0,1.0,sct,85
-81.0,81,49,8,1.0,1.0,1.0,mtc,86
-82.0,164,184,231,1.0,1.0,1.0,PVHmpd,87
-83.0,81,29,249,1.0,1.0,1.0,AHN,88
-84.0,48,57,218,1.0,1.0,1.0,RC,89
-85.0,168,7,215,1.0,1.0,1.0,NLLh,90
-86.0,101,110,163,1.0,1.0,1.0,IP,91
-87.0,186,207,30,1.0,1.0,1.0,ENTl4,92
-88.0,58,193,69,1.0,1.0,1.0,moV,93
-89.0,228,109,151,1.0,1.0,1.0,PVHp,94
-90.0,175,136,70,1.0,1.0,1.0,AI,95
-91.0,47,47,219,1.0,1.0,1.0,DCO,96
-92.0,40,92,107,1.0,1.0,1.0,TEa1,97
-93.0,254,53,168,1.0,1.0,1.0,SEZ,98
-94.0,111,128,38,1.0,1.0,1.0,NLLv,99
-95.0,62,50,14,1.0,1.0,1.0,IPN,100
-96.0,211,148,243,1.0,1.0,1.0,VCO,101
-97.0,160,204,22,1.0,1.0,1.0,nst,102
-98.0,237,192,86,1.0,1.0,1.0,PVHpm,103
-99.0,143,136,181,1.0,1.0,1.0,AId,104
-100.0,45,132,51,1.0,1.0,1.0,SOCm,105
-101.0,232,100,89,1.0,1.0,1.0,ISN,106
-102.0,160,181,37,1.0,1.0,1.0,MO1,107
-103.0,158,46,14,1.0,1.0,1.0,chpl,108
-104.0,216,209,218,1.0,1.0,1.0,ntt,109
-105.0,180,217,26,1.0,1.0,1.0,PVHpv,110
-106.0,212,27,162,1.0,1.0,1.0,AIp,111
-107.0,36,17,18,1.0,1.0,1.0,CNlam,112
-108.0,9,104,9,1.0,1.0,1.0,SSp-ll2/3,113
-109.0,172,235,195,1.0,1.0,1.0,SOCl,114
-110.0,45,133,54,1.0,1.0,1.0,IV,115
-111.0,243,152,48,1.0,1.0,1.0,chfl,116
-112.0,230,221,138,1.0,1.0,1.0,och,117
-113.0,72,15,114,1.0,1.0,1.0,PVi,118
-114.0,113,126,230,1.0,1.0,1.0,AIv,119
-115.0,176,241,220,1.0,1.0,1.0,AIp1,120
-116.0,32,122,143,1.0,1.0,1.0,VISl6b,121
-117.0,208,214,152,1.0,1.0,1.0,POR,122
-118.0,18,146,21,1.0,1.0,1.0,KF,123
-119.0,238,44,186,1.0,1.0,1.0,IVF,124
-120.0,171,136,193,1.0,1.0,1.0,opt,125
-121.0,41,252,65,1.0,1.0,1.0,PVp,126
-122.0,201,31,197,1.0,1.0,1.0,AM,127
-123.0,202,216,134,1.0,1.0,1.0,MRN,128
-124.0,20,197,19,1.0,1.0,1.0,V3,129
-125.0,195,194,120,1.0,1.0,1.0,CSm,130
-126.0,36,210,210,1.0,1.0,1.0,LA,131
-127.0,16,240,171,1.0,1.0,1.0,PL6b,132
-128.0,94,78,94,1.0,1.0,1.0,PVpo,133
-129.0,245,217,25,1.0,1.0,1.0,ptf,134
-130.0,5,173,61,1.0,1.0,1.0,AMB,135
-131.0,151,208,107,1.0,1.0,1.0,IRN,136
-132.0,124,222,165,1.0,1.0,1.0,CSl,137
-133.0,93,91,159,1.0,1.0,1.0,LAT,138
-134.0,38,79,58,1.0,1.0,1.0,ENTl5,139
-135.0,187,47,248,1.0,1.0,1.0,AQ,140
-136.0,19,32,31,1.0,1.0,1.0,PVR,141
-137.0,188,106,207,1.0,1.0,1.0,pap,142
-138.0,214,24,203,1.0,1.0,1.0,AMBv,143
-139.0,10,97,221,1.0,1.0,1.0,OT1-3,144
-140.0,233,93,182,1.0,1.0,1.0,V4,145
-141.0,104,156,218,1.0,1.0,1.0,PRNr,146
-142.0,226,23,14,1.0,1.0,1.0,LC,147
-143.0,109,34,145,1.0,1.0,1.0,GU4,148
-144.0,94,98,66,1.0,1.0,1.0,PVT,149
-145.0,4,210,203,1.0,1.0,1.0,pvbh,150
-146.0,68,133,37,1.0,1.0,1.0,AOB,151
-147.0,248,58,24,1.0,1.0,1.0,PIR1-3,152
-148.0,24,122,221,1.0,1.0,1.0,V4r,153
-149.0,52,219,33,1.0,1.0,1.0,PHY,154
-150.0,104,8,248,1.0,1.0,1.0,LD,155
-151.0,235,7,71,1.0,1.0,1.0,AUDd6a,156
-152.0,2,180,210,1.0,1.0,1.0,PVZ,157
-153.0,212,222,5,1.0,1.0,1.0,pc,158
-154.0,83,3,207,1.0,1.0,1.0,AON,159
-155.0,41,113,0,1.0,1.0,1.0,AON1,160
-156.0,70,4,29,1.0,1.0,1.0,NIS,161
-157.0,125,109,51,1.0,1.0,1.0,LDT,162
-158.0,134,85,94,1.0,1.0,1.0,AIp2/3,163
-159.0,131,28,217,1.0,1.0,1.0,c,164
-160.0,132,55,182,1.0,1.0,1.0,RAmb,165
-161.0,45,13,212,1.0,1.0,1.0,pmx,166
-162.0,160,38,164,1.0,1.0,1.0,AONd,167
-163.0,124,159,137,1.0,1.0,1.0,AON2,168
-164.0,49,208,171,1.0,1.0,1.0,PRP,169
-165.0,54,214,200,1.0,1.0,1.0,LGd,170
-166.0,219,254,174,1.0,1.0,1.0,PL1,171
-167.0,117,222,70,1.0,1.0,1.0,RCH,173
-168.0,31,49,101,1.0,1.0,1.0,poc,174
-169.0,80,33,196,1.0,1.0,1.0,AONe,175
-170.0,99,217,238,1.0,1.0,1.0,NR,177
-171.0,87,238,51,1.0,1.0,1.0,LGv,178
-172.0,148,61,89,1.0,1.0,1.0,ACA6a,179
-173.0,6,75,190,1.0,1.0,1.0,GU2/3,180
-174.0,12,21,70,1.0,1.0,1.0,RE,181
-175.0,109,32,94,1.0,1.0,1.0,php,182
-176.0,109,204,12,1.0,1.0,1.0,AONl,183
-177.0,150,74,60,1.0,1.0,1.0,FRP,184
-178.0,210,182,179,1.0,1.0,1.0,PPYd,185
-179.0,155,61,119,1.0,1.0,1.0,LH,186
-180.0,119,29,93,1.0,1.0,1.0,GU5,187
-181.0,62,233,208,1.0,1.0,1.0,AOBgl,188
-182.0,250,248,55,1.0,1.0,1.0,RH,189
-183.0,67,5,244,1.0,1.0,1.0,py,190
-184.0,106,4,195,1.0,1.0,1.0,AONm,191
-185.0,142,31,248,1.0,1.0,1.0,COAa1,192
-186.0,34,250,72,1.0,1.0,1.0,PPYs,193
-187.0,172,19,252,1.0,1.0,1.0,LHA,194
-188.0,213,137,251,1.0,1.0,1.0,PL2,195
-189.0,22,144,236,1.0,1.0,1.0,AOBgr,196
-190.0,248,171,49,1.0,1.0,1.0,RL,197
-191.0,114,151,53,1.0,1.0,1.0,pyd,198
-192.0,247,1,9,1.0,1.0,1.0,AONpv,199
-193.0,218,213,192,1.0,1.0,1.0,COAa2,200
-194.0,175,211,4,1.0,1.0,1.0,SSp-bfd2/3,201
-195.0,132,124,112,1.0,1.0,1.0,MV,202
-196.0,85,47,4,1.0,1.0,1.0,LIN,203
-197.0,203,73,72,1.0,1.0,1.0,AOBmi,204
-198.0,35,245,91,1.0,1.0,1.0,rstl,205
-199.0,237,243,71,1.0,1.0,1.0,RM,206
-200.0,43,31,54,1.0,1.0,1.0,AP,207
-201.0,98,218,219,1.0,1.0,1.0,COAa3,208
-202.0,26,221,240,1.0,1.0,1.0,LAV,209
-203.0,231,29,249,1.0,1.0,1.0,LM,210
-204.0,96,119,144,1.0,1.0,1.0,ACAd2/3,211
-205.0,176,77,30,1.0,1.0,1.0,MOBgl,212
-206.0,127,61,201,1.0,1.0,1.0,rstm,213
-207.0,4,36,200,1.0,1.0,1.0,RN,214
-208.0,102,124,95,1.0,1.0,1.0,APN,215
-209.0,23,167,97,1.0,1.0,1.0,COApl1,216
-210.0,35,96,31,1.0,1.0,1.0,SUV,217
-211.0,22,151,102,1.0,1.0,1.0,LP,218
-212.0,228,6,226,1.0,1.0,1.0,MO2/3,219
-213.0,171,16,2,1.0,1.0,1.0,MOBgr,220
-214.0,44,239,33,1.0,1.0,1.0,rrt,221
-215.0,115,202,57,1.0,1.0,1.0,RO,222
-216.0,220,254,74,1.0,1.0,1.0,ARH,223
-217.0,243,235,205,1.0,1.0,1.0,COApl2,224
-218.0,122,115,132,1.0,1.0,1.0,SPIV,225
-219.0,209,188,97,1.0,1.0,1.0,LPO,226
-220.0,134,6,219,1.0,1.0,1.0,ACA6b,227
-221.0,47,92,66,1.0,1.0,1.0,MOBipl,228
-222.0,182,163,170,1.0,1.0,1.0,sV,229
-223.0,71,25,187,1.0,1.0,1.0,RPA,230
-224.0,90,59,116,1.0,1.0,1.0,AT,231
-225.0,120,185,129,1.0,1.0,1.0,COApl3,232
-226.0,59,75,176,1.0,1.0,1.0,VISal5,233
-227.0,168,74,147,1.0,1.0,1.0,TEa4,234
-228.0,192,142,118,1.0,1.0,1.0,LRN,235
-229.0,162,149,11,1.0,1.0,1.0,MOBmi,236
-230.0,237,131,249,1.0,1.0,1.0,ts,237
-231.0,194,63,165,1.0,1.0,1.0,RPO,238
-232.0,115,58,124,1.0,1.0,1.0,ATN,239
-233.0,166,2,127,1.0,1.0,1.0,COApm1,240
-234.0,14,244,15,1.0,1.0,1.0,PTLp2/3,241
-235.0,180,196,88,1.0,1.0,1.0,LS,242
-236.0,214,147,189,1.0,1.0,1.0,AUDd6b,243
-237.0,132,92,4,1.0,1.0,1.0,MOBopl,244
-238.0,99,157,134,1.0,1.0,1.0,scrt,245
-239.0,239,250,152,1.0,1.0,1.0,RR,246
-240.0,226,39,134,1.0,1.0,1.0,AUD,247
-241.0,88,202,170,1.0,1.0,1.0,COApm2,248
-242.0,56,19,118,1.0,1.0,1.0,AUDpo6a,249
-243.0,29,85,199,1.0,1.0,1.0,LSc,250
-244.0,67,110,177,1.0,1.0,1.0,AUDp2/3,251
-245.0,99,77,16,1.0,1.0,1.0,AUDd5,252
-246.0,21,24,193,1.0,1.0,1.0,shp,253
-247.0,242,150,182,1.0,1.0,1.0,RSP,254
-248.0,64,183,63,1.0,1.0,1.0,AV,255
-249.0,72,83,36,1.0,1.0,1.0,COApm3,256
-250.0,251,25,212,1.0,1.0,1.0,VISpm6a,257
-251.0,119,185,50,1.0,1.0,1.0,LSr,258
-252.0,80,244,227,1.0,1.0,1.0,ENTmv1,259
-253.0,239,194,88,1.0,1.0,1.0,NLOT1,260
-254.0,246,42,62,1.0,1.0,1.0,sop,261
-255.0,242,218,138,1.0,1.0,1.0,RT,262
-256.0,223,34,50,1.0,1.0,1.0,AVP,263
-257.0,224,191,121,1.0,1.0,1.0,ORB1,264
-258.0,222,80,203,1.0,1.0,1.0,LSv,266
-259.0,87,249,226,1.0,1.0,1.0,DP6a,267
-260.0,156,202,114,1.0,1.0,1.0,NLOT2,268
-261.0,92,210,2,1.0,1.0,1.0,VISpl2/3,269
-262.0,138,113,226,1.0,1.0,1.0,srp,270
-263.0,106,170,140,1.0,1.0,1.0,SAG,271
-264.0,39,183,138,1.0,1.0,1.0,AVPV,272
-265.0,71,218,63,1.0,1.0,1.0,RSPd6a,274
-266.0,190,79,102,1.0,1.0,1.0,LSX,275
-267.0,126,27,117,1.0,1.0,1.0,PIR1,276
-268.0,104,99,130,1.0,1.0,1.0,stp,277
-269.0,138,179,1,1.0,1.0,1.0,sAMY,278
-270.0,94,134,141,1.0,1.0,1.0,RSPagl6b,279
-271.0,191,144,8,1.0,1.0,1.0,B,280
-272.0,26,184,3,1.0,1.0,1.0,VISam1,281
-273.0,142,23,64,1.0,1.0,1.0,LTN,283
-274.0,35,205,78,1.0,1.0,1.0,PIR2,284
-275.0,235,61,167,1.0,1.0,1.0,step,285
-276.0,194,83,222,1.0,1.0,1.0,SCH,286
-277.0,173,106,246,1.0,1.0,1.0,BAC,287
-278.0,159,238,169,1.0,1.0,1.0,ORBvl2/3,288
-279.0,31,41,117,1.0,1.0,1.0,TEa5,289
-280.0,41,192,133,1.0,1.0,1.0,LZ,290
-281.0,49,129,178,1.0,1.0,1.0,PIR3,291
-282.0,17,237,179,1.0,1.0,1.0,BA,292
-283.0,186,6,197,1.0,1.0,1.0,svp,293
-284.0,176,84,62,1.0,1.0,1.0,SCm,294
-285.0,233,221,158,1.0,1.0,1.0,BLA,295
-286.0,168,191,146,1.0,1.0,1.0,ACAv2/3,296
-287.0,228,69,9,1.0,1.0,1.0,TTd1-4,297
-288.0,40,208,251,1.0,1.0,1.0,MA,298
-289.0,54,224,251,1.0,1.0,1.0,MO5,299
-290.0,89,87,172,1.0,1.0,1.0,LGvl,300
-291.0,58,122,25,1.0,1.0,1.0,st,301
-292.0,160,134,61,1.0,1.0,1.0,SCs,302
-293.0,114,27,174,1.0,1.0,1.0,BLAa,303
-294.0,106,21,134,1.0,1.0,1.0,PL2/3,304
-295.0,155,85,147,1.0,1.0,1.0,VISp6b,305
-296.0,102,9,67,1.0,1.0,1.0,TTv1-3,306
-297.0,39,136,209,1.0,1.0,1.0,MARN,307
-298.0,99,5,102,1.0,1.0,1.0,PTLp6a,308
-299.0,168,192,115,1.0,1.0,1.0,snp,309
-300.0,120,183,8,1.0,1.0,1.0,SF,310
-301.0,59,185,76,1.0,1.0,1.0,BLAp,311
-302.0,174,69,220,1.0,1.0,1.0,ENTl4/5,312
-303.0,55,216,91,1.0,1.0,1.0,MB,313
-304.0,136,78,179,1.0,1.0,1.0,AIp6a,314
-305.0,127,42,134,1.0,1.0,1.0,Isocortex,315
-306.0,101,164,136,1.0,1.0,1.0,LGvm,316
-307.0,11,24,167,1.0,1.0,1.0,stf,317
-308.0,28,191,128,1.0,1.0,1.0,SG,318
-309.0,155,39,162,1.0,1.0,1.0,BMA,319
-310.0,206,151,176,1.0,1.0,1.0,MOp1,320
-311.0,93,124,190,1.0,1.0,1.0,SubG,321
-312.0,249,16,54,1.0,1.0,1.0,SSp,322
-313.0,15,15,36,1.0,1.0,1.0,MBmot,323
-314.0,104,175,0,1.0,1.0,1.0,ENTmv2,324
-315.0,101,178,44,1.0,1.0,1.0,SGN,325
-316.0,104,129,86,1.0,1.0,1.0,scp,326
-317.0,222,239,103,1.0,1.0,1.0,BMAa,327
-318.0,251,18,78,1.0,1.0,1.0,AId2/3,328
-319.0,65,233,247,1.0,1.0,1.0,SSp-bfd,329
-320.0,143,110,103,1.0,1.0,1.0,RSPd6b,330
-321.0,37,6,3,1.0,1.0,1.0,MBO,331
-322.0,13,87,138,1.0,1.0,1.0,ASO,332
-323.0,91,223,202,1.0,1.0,1.0,SH,333
-324.0,66,154,69,1.0,1.0,1.0,BMAp,334
-325.0,227,116,129,1.0,1.0,1.0,PERI6a,335
-326.0,37,127,130,1.0,1.0,1.0,csc,336
-327.0,242,241,25,1.0,1.0,1.0,SSp-ll,337
-328.0,180,125,70,1.0,1.0,1.0,SFO,338
-329.0,94,191,173,1.0,1.0,1.0,MBsen,339
-330.0,86,121,124,1.0,1.0,1.0,PTLp6b,340
-331.0,35,135,86,1.0,1.0,1.0,smd,341
-332.0,101,50,228,1.0,1.0,1.0,SI,342
-333.0,152,21,34,1.0,1.0,1.0,BS,343
-334.0,231,88,119,1.0,1.0,1.0,AIp5,344
-335.0,16,23,84,1.0,1.0,1.0,SSp-m,345
-336.0,43,178,47,1.0,1.0,1.0,SSp2/3,346
-337.0,59,219,113,1.0,1.0,1.0,SBPV,347
-338.0,70,249,100,1.0,1.0,1.0,MBsta,348
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-340.0,158,79,54,1.0,1.0,1.0,SLC,350
-341.0,43,203,145,1.0,1.0,1.0,BST,351
-342.0,8,79,1,1.0,1.0,1.0,ORB5,352
-343.0,112,199,117,1.0,1.0,1.0,SSp-n,353
-344.0,93,113,26,1.0,1.0,1.0,MY,354
-345.0,67,76,246,1.0,1.0,1.0,AIp6b,355
-346.0,149,171,43,1.0,1.0,1.0,PST,356
-347.0,85,95,234,1.0,1.0,1.0,ttp,357
-348.0,6,221,78,1.0,1.0,1.0,SLD,358
-349.0,13,120,159,1.0,1.0,1.0,BSTa,359
-350.0,77,76,17,1.0,1.0,1.0,DP2/3,360
-351.0,90,54,211,1.0,1.0,1.0,SSp-tr,361
-352.0,136,238,174,1.0,1.0,1.0,MD,362
-353.0,166,60,147,1.0,1.0,1.0,PL5,363
-354.0,127,97,113,1.0,1.0,1.0,PSTN,364
-355.0,210,214,254,1.0,1.0,1.0,tp,365
-356.0,188,119,114,1.0,1.0,1.0,SMT,366
-357.0,154,167,84,1.0,1.0,1.0,BSTp,367
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-362.0,149,154,14,1.0,1.0,1.0,ICB,372
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-368.0,198,160,135,1.0,1.0,1.0,SSs,378
-369.0,154,232,133,1.0,1.0,1.0,MY-sat,379
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-373.0,5,118,84,1.0,1.0,1.0,COApm1-3,383
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-375.0,129,7,178,1.0,1.0,1.0,VISp,385
-376.0,117,193,154,1.0,1.0,1.0,MY-sen,386
-377.0,100,26,122,1.0,1.0,1.0,ENTl5/6,387
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-383.0,103,63,199,1.0,1.0,1.0,VISpl6b,393
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-385.0,29,131,200,1.0,1.0,1.0,MDRN,395
-386.0,131,211,98,1.0,1.0,1.0,iaf,396
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-388.0,47,100,16,1.0,1.0,1.0,SOC,398
-389.0,47,77,91,1.0,1.0,1.0,CA1so,399
-390.0,200,242,103,1.0,1.0,1.0,PAA1-3,400
-391.0,30,235,163,1.0,1.0,1.0,VISam4,401
-392.0,90,156,130,1.0,1.0,1.0,VISal,402
-393.0,9,168,239,1.0,1.0,1.0,MEA,403
-394.0,154,17,8,1.0,1.0,1.0,oct,404
-395.0,159,174,244,1.0,1.0,1.0,vlt,405
-396.0,161,217,148,1.0,1.0,1.0,SPF,406
-397.0,13,117,98,1.0,1.0,1.0,CA1sp,407
-398.0,183,113,5,1.0,1.0,1.0,PAA1,408
-399.0,161,236,193,1.0,1.0,1.0,VISl,409
-400.0,48,233,100,1.0,1.0,1.0,rct,410
-401.0,25,107,151,1.0,1.0,1.0,MEAad,411
-402.0,6,153,122,1.0,1.0,1.0,ORBl2/3,412
-403.0,247,50,73,1.0,1.0,1.0,vVIIIn,413
-404.0,227,77,161,1.0,1.0,1.0,SPFm,414
-405.0,41,153,4,1.0,1.0,1.0,CA1sr,415
-406.0,159,129,76,1.0,1.0,1.0,PAA2,416
-407.0,192,174,99,1.0,1.0,1.0,VISrl,417
-408.0,140,147,97,1.0,1.0,1.0,MEAav,418
-409.0,158,218,213,1.0,1.0,1.0,ENTmv4,419
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-412.0,185,108,186,1.0,1.0,1.0,SPFp,422
-413.0,116,172,138,1.0,1.0,1.0,CA2,423
-414.0,231,136,15,1.0,1.0,1.0,PAA3,424
-415.0,102,126,158,1.0,1.0,1.0,VISpl,425
-416.0,84,52,185,1.0,1.0,1.0,MEApd,426
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-418.0,220,137,89,1.0,1.0,1.0,mct,428
-419.0,201,49,143,1.0,1.0,1.0,SPVC,429
-420.0,95,229,145,1.0,1.0,1.0,RSPv2/3,430
-421.0,65,46,224,1.0,1.0,1.0,CA2slm,431
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-424.0,243,37,87,1.0,1.0,1.0,RSPd2/3,434
-425.0,128,222,247,1.0,1.0,1.0,MEApv,435
-426.0,59,205,25,1.0,1.0,1.0,fx,436
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-428.0,199,44,91,1.0,1.0,1.0,CA2so,438
-429.0,192,17,194,1.0,1.0,1.0,PVHdp,439
-430.0,173,187,86,1.0,1.0,1.0,ORBl6a,440
-431.0,234,72,119,1.0,1.0,1.0,VISam6b,441
-432.0,52,237,152,1.0,1.0,1.0,RSPd1,442
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-442.0,246,119,246,1.0,1.0,1.0,MEPO,452
-443.0,166,144,172,1.0,1.0,1.0,SS,453
-444.0,77,173,105,1.0,1.0,1.0,CA2sr,454
-445.0,74,48,157,1.0,1.0,1.0,PVHlp,455
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-447.0,165,180,99,1.0,1.0,1.0,VIS6a,457
-448.0,254,143,136,1.0,1.0,1.0,OT1,458
-449.0,118,219,96,1.0,1.0,1.0,aolt,459
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-452.0,82,20,76,1.0,1.0,1.0,SSN,462
-453.0,218,222,69,1.0,1.0,1.0,CA3,463
-454.0,127,201,149,1.0,1.0,1.0,PVHmpv,464
-455.0,196,153,212,1.0,1.0,1.0,OT2,465
-456.0,61,71,49,1.0,1.0,1.0,alv,466
-457.0,118,13,54,1.0,1.0,1.0,MEZ,467
-458.0,98,49,179,1.0,1.0,1.0,ENTm2a,468
-459.0,54,98,157,1.0,1.0,1.0,VISpm6b,469
-460.0,96,65,245,1.0,1.0,1.0,STN,470
-461.0,224,205,220,1.0,1.0,1.0,CA3slm,471
-462.0,195,118,77,1.0,1.0,1.0,MEApd-a,472
-463.0,58,240,16,1.0,1.0,1.0,OT3,473
-464.0,188,192,111,1.0,1.0,1.0,ab,474
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-466.0,119,122,249,1.0,1.0,1.0,ORB6a,476
-467.0,255,46,209,1.0,1.0,1.0,STR,477
-468.0,216,223,165,1.0,1.0,1.0,SSp-ll6a,478
-469.0,207,243,149,1.0,1.0,1.0,CA3slu,479
-470.0,236,92,111,1.0,1.0,1.0,MEApd-b,480
-471.0,71,233,183,1.0,1.0,1.0,isl,481
-472.0,139,20,182,1.0,1.0,1.0,bic,482
-473.0,129,66,230,1.0,1.0,1.0,MH,483
-474.0,80,2,62,1.0,1.0,1.0,ORBm1,484
-475.0,111,76,24,1.0,1.0,1.0,STRd,485
-476.0,107,95,138,1.0,1.0,1.0,CA3so,486
-477.0,179,85,158,1.0,1.0,1.0,MEApd-c,487
-478.0,76,154,186,1.0,1.0,1.0,ORBl6b,488
-479.0,153,74,65,1.0,1.0,1.0,islm,489
-480.0,76,162,45,1.0,1.0,1.0,bct,490
-481.0,242,12,63,1.0,1.0,1.0,MM,491
-482.0,143,214,197,1.0,1.0,1.0,ORB2/3,492
-483.0,251,18,143,1.0,1.0,1.0,STRv,493
-484.0,19,229,156,1.0,1.0,1.0,SCig-a,494
-485.0,179,225,120,1.0,1.0,1.0,CA3sp,495
-486.0,76,47,234,1.0,1.0,1.0,DP1,496
-487.0,200,124,207,1.0,1.0,1.0,VIS6b,497
-488.0,77,95,1,1.0,1.0,1.0,BSTam,498
-489.0,172,127,94,1.0,1.0,1.0,cct,499
-490.0,99,61,228,1.0,1.0,1.0,MO,500
-491.0,25,108,252,1.0,1.0,1.0,VISpm4,501
-492.0,174,21,26,1.0,1.0,1.0,SUB,502
-493.0,17,235,97,1.0,1.0,1.0,SCig-b,503
-494.0,221,218,222,1.0,1.0,1.0,CA3sr,504
-495.0,213,197,230,1.0,1.0,1.0,BSTdm,505
-496.0,159,88,182,1.0,1.0,1.0,das,506
-497.0,69,19,195,1.0,1.0,1.0,MOB,507
-498.0,175,145,228,1.0,1.0,1.0,ENTm2b,508
-499.0,232,154,189,1.0,1.0,1.0,SUBd,509
-500.0,24,45,192,1.0,1.0,1.0,SSp-ll6b,510
-501.0,100,146,231,1.0,1.0,1.0,SCig-c,511
-502.0,193,97,72,1.0,1.0,1.0,CB,512
-503.0,172,203,206,1.0,1.0,1.0,BSTfu,513
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-505.0,215,61,61,1.0,1.0,1.0,MPN,515
-506.0,204,132,149,1.0,1.0,1.0,ORB6b,516
-507.0,94,158,216,1.0,1.0,1.0,TR1-3,517
-508.0,247,227,128,1.0,1.0,1.0,SUBv,518
-509.0,98,161,200,1.0,1.0,1.0,CBN,519
-510.0,125,146,91,1.0,1.0,1.0,AUDv6a,520
-511.0,252,187,74,1.0,1.0,1.0,BSTmg,521
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-513.0,75,24,145,1.0,1.0,1.0,MPO,523
-514.0,2,186,71,1.0,1.0,1.0,ORBm2,524
-515.0,131,107,132,1.0,1.0,1.0,SUM,525
-516.0,180,140,186,1.0,1.0,1.0,ENTm1,526
-517.0,21,156,31,1.0,1.0,1.0,AUDd1,527
-518.0,230,143,38,1.0,1.0,1.0,CBX,528
-519.0,129,235,211,1.0,1.0,1.0,BSTv,529
-520.0,185,184,138,1.0,1.0,1.0,df,530
-521.0,13,123,212,1.0,1.0,1.0,MPT,531
-522.0,253,198,206,1.0,1.0,1.0,PTLp1,532
-523.0,233,146,83,1.0,1.0,1.0,VISpm,533
-524.0,12,100,63,1.0,1.0,1.0,SUT,534
-525.0,14,66,120,1.0,1.0,1.0,DP2,535
-526.0,148,89,21,1.0,1.0,1.0,CEA,536
-527.0,29,14,176,1.0,1.0,1.0,BSTal,537
-528.0,100,8,145,1.0,1.0,1.0,lotd,538
-529.0,34,229,153,1.0,1.0,1.0,MRNm,539
-530.0,11,2,106,1.0,1.0,1.0,PERI1,540
-531.0,162,49,228,1.0,1.0,1.0,TEa,541
-532.0,205,250,183,1.0,1.0,1.0,RSPv1,542
-533.0,246,35,154,1.0,1.0,1.0,ENTm2,543
-534.0,13,223,19,1.0,1.0,1.0,CEAc,544
-535.0,237,172,229,1.0,1.0,1.0,RSPd4,545
-536.0,36,249,115,1.0,1.0,1.0,BSTju,546
-537.0,85,15,247,1.0,1.0,1.0,dlf,547
-538.0,28,244,215,1.0,1.0,1.0,MRNmg,548
-539.0,198,208,138,1.0,1.0,1.0,TH,549
-540.0,173,26,118,1.0,1.0,1.0,ENTm5/6,550
-541.0,161,111,240,1.0,1.0,1.0,CEAl,551
-542.0,20,185,160,1.0,1.0,1.0,PRNv,552
-543.0,244,135,116,1.0,1.0,1.0,sctd,553
-544.0,105,1,54,1.0,1.0,1.0,BSTov,554
-545.0,206,13,80,1.0,1.0,1.0,MRNp,555
-546.0,26,83,99,1.0,1.0,1.0,ILA2/3,556
-547.0,15,111,91,1.0,1.0,1.0,TM,557
-548.0,39,151,221,1.0,1.0,1.0,SSp-n1,558
-549.0,203,249,234,1.0,1.0,1.0,CEAm,559
-550.0,162,46,33,1.0,1.0,1.0,CNspg,560
-551.0,138,248,167,1.0,1.0,1.0,VIS2/3,561
-552.0,76,229,215,1.0,1.0,1.0,BSTrh,562
-553.0,65,215,21,1.0,1.0,1.0,dtt,563
-554.0,124,54,199,1.0,1.0,1.0,MS,564
-555.0,141,165,186,1.0,1.0,1.0,VISpm5,565
-556.0,153,118,189,1.0,1.0,1.0,TR,566
-557.0,249,28,61,1.0,1.0,1.0,CH,567
-558.0,103,227,246,1.0,1.0,1.0,ACVI,568
-559.0,205,90,56,1.0,1.0,1.0,BSTd,569
-560.0,226,32,180,1.0,1.0,1.0,dl,570
-561.0,192,174,17,1.0,1.0,1.0,MTN,571
-562.0,44,28,105,1.0,1.0,1.0,ACA1,572
-563.0,3,65,130,1.0,1.0,1.0,VISl4,573
-564.0,32,130,88,1.0,1.0,1.0,TRN,574
-565.0,213,210,113,1.0,1.0,1.0,CL,575
-566.0,238,211,120,1.0,1.0,1.0,ACVII,576
-567.0,100,223,164,1.0,1.0,1.0,SSp-ul4,577
-568.0,85,148,141,1.0,1.0,1.0,BSTpr,578
-569.0,114,237,55,1.0,1.0,1.0,ec,579
-570.0,32,1,119,1.0,1.0,1.0,NB,580
-571.0,26,6,177,1.0,1.0,1.0,TRS,581
-572.0,113,185,153,1.0,1.0,1.0,ORBm2/3,582
-573.0,162,242,219,1.0,1.0,1.0,CLA,583
-574.0,205,85,48,1.0,1.0,1.0,COApl1-2,584
-575.0,13,117,75,1.0,1.0,1.0,BSTif,585
-576.0,36,6,74,1.0,1.0,1.0,fpr,586
-577.0,180,137,59,1.0,1.0,1.0,ND,587
-578.0,208,104,20,1.0,1.0,1.0,ACAv1,588
-579.0,153,33,129,1.0,1.0,1.0,TT,589
-580.0,112,97,25,1.0,1.0,1.0,RSPv6a,590
-581.0,73,21,163,1.0,1.0,1.0,CLI,591
-582.0,192,22,40,1.0,1.0,1.0,COApm1-2,592
-583.0,58,167,196,1.0,1.0,1.0,VISp1,593
-584.0,62,20,58,1.0,1.0,1.0,BSTtr,594
-585.0,149,27,109,1.0,1.0,1.0,fr,595
-586.0,177,95,247,1.0,1.0,1.0,NDB,596
-587.0,43,38,231,1.0,1.0,1.0,TTd,597
-588.0,157,143,10,1.0,1.0,1.0,AUDv6b,598
-589.0,81,216,142,1.0,1.0,1.0,CM,599
-590.0,42,138,98,1.0,1.0,1.0,AUDd2/3,600
-591.0,157,147,137,1.0,1.0,1.0,VISal6a,601
-592.0,197,151,125,1.0,1.0,1.0,BSTse,602
-593.0,63,72,147,1.0,1.0,1.0,fi,603
-594.0,37,113,191,1.0,1.0,1.0,NI,604
-595.0,164,77,16,1.0,1.0,1.0,TTv,605
-596.0,116,206,144,1.0,1.0,1.0,RSPv2,606
-597.0,238,202,9,1.0,1.0,1.0,CN,607
-598.0,64,243,180,1.0,1.0,1.0,ORBvl6a,608
-599.0,138,228,71,1.0,1.0,1.0,SPA,609
-600.0,66,128,167,1.0,1.0,1.0,RSPd5,610
-601.0,34,66,125,1.0,1.0,1.0,hbc,611
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-603.0,78,188,13,1.0,1.0,1.0,VISl5,613
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-725.0,80,137,49,1.0,1.0,1.0,AUDp1,735
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-729.0,53,159,209,1.0,1.0,1.0,ACA5,739
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-733.0,159,140,229,1.0,1.0,1.0,ENTm6,743
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-740.0,110,229,159,1.0,1.0,1.0,VISpl1,750
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-745.0,118,121,48,1.0,1.0,1.0,AUDv2/3,755
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-748.0,10,183,253,1.0,1.0,1.0,DGcr-sg,758
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-751.0,152,213,204,1.0,1.0,1.0,VMHa,761
-752.0,250,253,206,1.0,1.0,1.0,phpd,762
-753.0,196,255,107,1.0,1.0,1.0,OV,763
-754.0,40,121,46,1.0,1.0,1.0,ENTl2b,764
-755.0,92,160,190,1.0,1.0,1.0,x,765
-756.0,183,74,92,1.0,1.0,1.0,DGlb,766
-757.0,145,250,175,1.0,1.0,1.0,MOs5,767
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-764.0,144,5,223,1.0,1.0,1.0,RSPagl5,774
-765.0,81,43,74,1.0,1.0,1.0,DGlb-mo,775
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-767.0,60,58,87,1.0,1.0,1.0,VMHdm,777
-768.0,244,126,171,1.0,1.0,1.0,VISp5,778
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-778.0,144,45,98,1.0,1.0,1.0,PAA,788
-779.0,196,8,49,1.0,1.0,1.0,z,789
-780.0,142,127,212,1.0,1.0,1.0,DGlb-sg,790
-781.0,142,96,158,1.0,1.0,1.0,AUDpo5,791
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-783.0,166,24,10,1.0,1.0,1.0,SSp1,793
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-788.0,56,103,96,1.0,1.0,1.0,VIIn,798
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-790.0,80,51,100,1.0,1.0,1.0,AIv5,800
-791.0,192,175,124,1.0,1.0,1.0,VIS1,801
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-802.0,163,255,214,1.0,1.0,1.0,dscp,812
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-805.0,118,136,119,1.0,1.0,1.0,DGmb-po,815
-806.0,214,187,34,1.0,1.0,1.0,AUDp4,816
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-808.0,53,234,1,1.0,1.0,1.0,PALd,818
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-810.0,230,24,38,1.0,1.0,1.0,ICd,820
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-813.0,141,91,127,1.0,1.0,1.0,DGmb-sg,823
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-816.0,173,106,46,1.0,1.0,1.0,PALm,826
-817.0,159,20,244,1.0,1.0,1.0,ILA5,827
-818.0,160,104,187,1.0,1.0,1.0,ICe,828
-819.0,179,177,225,1.0,1.0,1.0,SUBd-m,829
-820.0,244,126,13,1.0,1.0,1.0,DMH,830
-821.0,224,3,107,1.0,1.0,1.0,AId6b,831
-822.0,3,206,53,1.0,1.0,1.0,IIIn,832
-823.0,163,31,53,1.0,1.0,1.0,supv,833
-824.0,48,51,9,1.0,1.0,1.0,SCzo,834
-825.0,1,230,175,1.0,1.0,1.0,PALv,835
-826.0,81,140,89,1.0,1.0,1.0,ECT1,836
-827.0,115,105,90,1.0,1.0,1.0,SUBd-sr,837
-828.0,217,240,78,1.0,1.0,1.0,SSp-n2/3,838
-829.0,34,64,143,1.0,1.0,1.0,DMX,839
-830.0,128,255,15,1.0,1.0,1.0,In,840
-831.0,238,54,168,1.0,1.0,1.0,tb,841
-832.0,241,154,160,1.0,1.0,1.0,SCsg,842
-833.0,8,54,183,1.0,1.0,1.0,PAR,843
-834.0,94,223,44,1.0,1.0,1.0,MOp6a,844
-835.0,163,202,125,1.0,1.0,1.0,SUBd-sp,845
-836.0,10,47,144,1.0,1.0,1.0,DN,846
-837.0,197,248,71,1.0,1.0,1.0,AUDp5,847
-838.0,79,166,149,1.0,1.0,1.0,IIn,848
-839.0,135,152,223,1.0,1.0,1.0,VISC6b,849
-840.0,196,88,181,1.0,1.0,1.0,uf,850
-841.0,244,95,18,1.0,1.0,1.0,SCop,851
-842.0,85,52,239,1.0,1.0,1.0,PARN,852
-843.0,103,169,204,1.0,1.0,1.0,SUBv-m,853
-844.0,118,51,67,1.0,1.0,1.0,SSp-ul2/3,854
-845.0,228,243,192,1.0,1.0,1.0,rst,855
-846.0,76,122,54,1.0,1.0,1.0,DORpm,856
-847.0,211,7,11,1.0,1.0,1.0,VISC6a,857
-848.0,129,234,52,1.0,1.0,1.0,vc,858
-849.0,119,230,34,1.0,1.0,1.0,PAS,859
-850.0,61,57,24,1.0,1.0,1.0,PBlc,860
-851.0,156,32,92,1.0,1.0,1.0,SUBv-sr,861
-852.0,165,134,60,1.0,1.0,1.0,SSs6a,862
-853.0,51,197,49,1.0,1.0,1.0,rust,863
-854.0,129,93,32,1.0,1.0,1.0,DORsm,864
-855.0,11,20,114,1.0,1.0,1.0,SSp4,865
-856.0,152,109,163,1.0,1.0,1.0,sctv,866
-857.0,176,69,162,1.0,1.0,1.0,PB,867
-858.0,58,118,81,1.0,1.0,1.0,PBld,868
-859.0,198,12,65,1.0,1.0,1.0,VISpl4,869
-860.0,98,4,26,1.0,1.0,1.0,SUBv-sp,870
-861.0,57,122,13,1.0,1.0,1.0,sst,871
-862.0,139,98,83,1.0,1.0,1.0,DR,872
-863.0,95,195,131,1.0,1.0,1.0,SSs1,873
-864.0,213,126,84,1.0,1.0,1.0,PBG,874
-865.0,105,36,124,1.0,1.0,1.0,PBle,875
-866.0,77,108,254,1.0,1.0,1.0,aot,876
-867.0,6,150,206,1.0,1.0,1.0,tsp,877
-868.0,205,11,138,1.0,1.0,1.0,SSp-m1,878
-869.0,172,38,246,1.0,1.0,1.0,RSPd,879
-870.0,176,125,4,1.0,1.0,1.0,DTN,880
-871.0,161,205,41,1.0,1.0,1.0,PBl,881
-872.0,248,33,227,1.0,1.0,1.0,MOp6b,882
-873.0,239,253,74,1.0,1.0,1.0,PBls,883
-874.0,254,154,242,1.0,1.0,1.0,amc,884
-875.0,113,236,200,1.0,1.0,1.0,tn,885
-876.0,185,136,182,1.0,1.0,1.0,RSPv,886
-877.0,78,106,90,1.0,1.0,1.0,ECO,887
-878.0,118,182,173,1.0,1.0,1.0,PERI2/3,888
-879.0,45,104,243,1.0,1.0,1.0,SSp-n6a,889
-880.0,104,127,29,1.0,1.0,1.0,PBm,890
-881.0,176,124,200,1.0,1.0,1.0,PBlv,891
-882.0,73,39,40,1.0,1.0,1.0,apd,892
-883.0,172,251,34,1.0,1.0,1.0,SSs6b,893
-884.0,91,114,199,1.0,1.0,1.0,RSPagl,894
-885.0,218,25,159,1.0,1.0,1.0,ECT,895
-886.0,191,118,24,1.0,1.0,1.0,lfbst,896
-887.0,201,209,93,1.0,1.0,1.0,VISC1,897
-888.0,3,225,208,1.0,1.0,1.0,PCG,898
-889.0,103,21,95,1.0,1.0,1.0,PBme,899
-890.0,85,200,89,1.0,1.0,1.0,aco,900
-891.0,36,87,130,1.0,1.0,1.0,Vn,901
-892.0,94,96,101,1.0,1.0,1.0,VISpl5,902
-893.0,195,85,169,1.0,1.0,1.0,ECU,903
-894.0,106,127,67,1.0,1.0,1.0,MSC,904
-895.0,140,174,192,1.0,1.0,1.0,VISal2/3,905
-896.0,182,32,101,1.0,1.0,1.0,RSPagl6a,906
-897.0,91,5,240,1.0,1.0,1.0,PCN,907
-898.0,178,17,240,1.0,1.0,1.0,act,908
-899.0,117,60,42,1.0,1.0,1.0,ENT,909
-900.0,157,154,18,1.0,1.0,1.0,ORBm6a,910
-901.0,88,122,222,1.0,1.0,1.0,IVn,911
-902.0,87,156,68,1.0,1.0,1.0,LING,912
-903.0,104,139,33,1.0,1.0,1.0,VIS4,913
-904.0,169,23,227,1.0,1.0,1.0,PD,914
-905.0,163,135,163,1.0,1.0,1.0,PBmm,915
-906.0,252,178,7,1.0,1.0,1.0,bsc,916
-907.0,127,226,104,1.0,1.0,1.0,Xn,917
-908.0,21,61,138,1.0,1.0,1.0,ENTl,918
-909.0,3,223,198,1.0,1.0,1.0,ACAd6a,919
-910.0,133,152,35,1.0,1.0,1.0,CENT,920
-911.0,35,166,150,1.0,1.0,1.0,SSp5,921
-912.0,254,132,26,1.0,1.0,1.0,PERI,922
-913.0,170,152,57,1.0,1.0,1.0,PBmv,923
-914.0,8,53,114,1.0,1.0,1.0,cpd,924
-915.0,203,91,246,1.0,1.0,1.0,vrt,925
-916.0,13,21,101,1.0,1.0,1.0,ENTm,926
-917.0,81,210,22,1.0,1.0,1.0,ACAd6b,927
-918.0,149,180,29,1.0,1.0,1.0,CUL,928
-919.0,20,67,58,1.0,1.0,1.0,SSp-n6b,929
-920.0,174,71,12,1.0,1.0,1.0,PF,930
-921.0,9,240,231,1.0,1.0,1.0,PG,931
-922.0,44,153,122,1.0,1.0,1.0,cett,932
-923.0,55,26,78,1.0,1.0,1.0,VIIIn,933
-924.0,84,11,226,1.0,1.0,1.0,ENTmv,934
-925.0,95,98,163,1.0,1.0,1.0,ACAd1,935
-926.0,67,117,63,1.0,1.0,1.0,DEC,936
-927.0,229,125,110,1.0,1.0,1.0,VIS5,937
-928.0,222,250,153,1.0,1.0,1.0,PGRN,938
-929.0,226,206,74,1.0,1.0,1.0,AMBd,939
-930.0,161,126,25,1.0,1.0,1.0,cing,940
-931.0,20,187,140,1.0,1.0,1.0,vsp,941
-932.0,251,132,116,1.0,1.0,1.0,EP,942
-933.0,137,100,43,1.0,1.0,1.0,MOp2/3,943
-934.0,35,11,150,1.0,1.0,1.0,FOTU,944
-935.0,143,10,102,1.0,1.0,1.0,SSp-ul6a,945
-936.0,205,28,80,1.0,1.0,1.0,PH,946
-937.0,98,101,38,1.0,1.0,1.0,MO6b,947
-938.0,101,201,36,1.0,1.0,1.0,cVIIIn,948
-939.0,208,64,162,1.0,1.0,1.0,von,949
-940.0,223,73,124,1.0,1.0,1.0,SSp-m4,950
-941.0,18,10,141,1.0,1.0,1.0,PYR,951
-942.0,212,200,153,1.0,1.0,1.0,EPd,952
-943.0,185,92,152,1.0,1.0,1.0,PIN,953
-944.0,136,125,109,1.0,1.0,1.0,AUDp6a,954
-945.0,143,98,135,1.0,1.0,1.0,LRNm,955
-946.0,120,208,176,1.0,1.0,1.0,fa,956
-947.0,121,38,231,1.0,1.0,1.0,UVU,957
-948.0,91,150,135,1.0,1.0,1.0,EPI,958
-949.0,3,122,27,1.0,1.0,1.0,AUDv1,959
-950.0,63,194,235,1.0,1.0,1.0,cbf,960
-951.0,36,123,78,1.0,1.0,1.0,PIR,961
-952.0,113,175,96,1.0,1.0,1.0,MOs2/3,962
-953.0,105,93,196,1.0,1.0,1.0,LRNp,963
-954.0,193,225,121,1.0,1.0,1.0,ee,964
-955.0,106,24,106,1.0,1.0,1.0,RSPagl2/3,965
-956.0,157,40,244,1.0,1.0,1.0,EPv,966
-957.0,22,136,144,1.0,1.0,1.0,cm,967
-958.0,126,138,152,1.0,1.0,1.0,NOD,968
-959.0,4,181,6,1.0,1.0,1.0,ORBvl1,969
-960.0,17,170,195,1.0,1.0,1.0,PGRNd,970
-961.0,98,194,168,1.0,1.0,1.0,fp,971
-962.0,149,248,185,1.0,1.0,1.0,PL,972
-963.0,40,92,93,1.0,1.0,1.0,VISl2/3,973
-964.0,71,110,216,1.0,1.0,1.0,SSp-m5,974
-965.0,233,224,213,1.0,1.0,1.0,EW,975
-966.0,143,51,139,1.0,1.0,1.0,CENT2,976
-967.0,129,204,144,1.0,1.0,1.0,ECT6a,977
-968.0,35,221,237,1.0,1.0,1.0,PGRNl,978
-969.0,165,89,100,1.0,1.0,1.0,ccr,979
-970.0,7,233,34,1.0,1.0,1.0,PMd,980
-971.0,185,195,95,1.0,1.0,1.0,SSp-bfd1,981
-972.0,33,180,208,1.0,1.0,1.0,FC,982
-973.0,248,221,226,1.0,1.0,1.0,lfbs,983
-974.0,209,11,108,1.0,1.0,1.0,CENT3,984
-975.0,216,35,223,1.0,1.0,1.0,MOp,985
-976.0,58,160,90,1.0,1.0,1.0,ccs,986
-977.0,67,175,69,1.0,1.0,1.0,P-mot,987
-978.0,69,4,221,1.0,1.0,1.0,ECT5,988
-979.0,247,204,57,1.0,1.0,1.0,FN,989
-980.0,169,23,203,1.0,1.0,1.0,AUDv4,990
-981.0,121,43,102,1.0,1.0,1.0,mfbs,991
-982.0,87,140,52,1.0,1.0,1.0,CUL4,992
-983.0,117,163,156,1.0,1.0,1.0,MOs,993
-984.0,49,47,104,1.0,1.0,1.0,cbt,994
-985.0,71,54,101,1.0,1.0,1.0,PMR,995
-986.0,171,92,3,1.0,1.0,1.0,AId1,996
-987.0,34,127,110,1.0,1.0,1.0,root,997
-988.0,133,43,58,1.0,1.0,1.0,FS,998
-989.0,230,171,30,1.0,1.0,1.0,ENTl2/3,999
-990.0,6,17,61,1.0,1.0,1.0,eps,1000
-991.0,91,227,37,1.0,1.0,1.0,CUL5,1001
-992.0,205,8,153,1.0,1.0,1.0,AUDp,1002
-993.0,214,1,158,1.0,1.0,1.0,cpt,1003
-994.0,125,32,241,1.0,1.0,1.0,PMv,1004
-995.0,156,154,74,1.0,1.0,1.0,AUDp6b,1005
-996.0,121,122,104,1.0,1.0,1.0,SSp-tr1,1006
-997.0,182,227,99,1.0,1.0,1.0,SIM,1007
-998.0,82,37,46,1.0,1.0,1.0,GENd,1008
-999.0,222,233,233,1.0,1.0,1.0,fiber tracts,1009
-1000.0,239,95,124,1.0,1.0,1.0,VISC4,1010
-1001.0,178,105,41,1.0,1.0,1.0,AUDd,1011
-1002.0,115,57,163,1.0,1.0,1.0,crt,1012
-1003.0,63,130,155,1.0,1.0,1.0,GENv,1014
-1004.0,115,50,11,1.0,1.0,1.0,ACAd5,1015
-1005.0,120,94,90,1.0,1.0,1.0,onl,1016
-1006.0,243,155,170,1.0,1.0,1.0,AN,1017
-1007.0,159,97,59,1.0,1.0,1.0,AUDv,1018
-1008.0,41,177,68,1.0,1.0,1.0,cstc,1019
-1009.0,52,212,18,1.0,1.0,1.0,PO,1020
-1010.0,3,68,35,1.0,1.0,1.0,MOs6a,1021
-1011.0,123,144,8,1.0,1.0,1.0,GPe,1022
-1012.0,85,63,9,1.0,1.0,1.0,AUDv5,1023
-1013.0,101,107,3,1.0,1.0,1.0,grv,1024
-1014.0,227,185,130,1.0,1.0,1.0,PRM,1025
-1015.0,118,74,240,1.0,1.0,1.0,SSp-ul6b,1026
-1016.0,47,22,84,1.0,1.0,1.0,AUDpo,1027
-1017.0,17,141,189,1.0,1.0,1.0,cstu,1028
-1018.0,231,95,18,1.0,1.0,1.0,POL,1029
-1019.0,231,191,121,1.0,1.0,1.0,SSp-ll1,1030
-1020.0,65,26,105,1.0,1.0,1.0,GPi,1031
-1021.0,205,161,247,1.0,1.0,1.0,grv of CTX,1032
-1022.0,182,48,240,1.0,1.0,1.0,COPY,1033
-1023.0,94,103,16,1.0,1.0,1.0,TTd1,1034
-1024.0,62,217,174,1.0,1.0,1.0,SSs4,1035
-1025.0,153,20,166,1.0,1.0,1.0,cte,1036
-1026.0,40,34,67,1.0,1.0,1.0,POST,1037
-1027.0,25,91,174,1.0,1.0,1.0,SSp-bfd6a,1038
-1028.0,223,209,190,1.0,1.0,1.0,GR,1039
-1029.0,224,242,126,1.0,1.0,1.0,grv of CBX,1040
-1030.0,46,240,19,1.0,1.0,1.0,PFL,1041
-1031.0,179,63,155,1.0,1.0,1.0,TTd2,1042
-1032.0,148,200,96,1.0,1.0,1.0,tspc,1043
-1033.0,6,184,193,1.0,1.0,1.0,PP,1044
-1034.0,178,136,16,1.0,1.0,1.0,ECT6b,1045
-1035.0,89,74,141,1.0,1.0,1.0,VISam6a,1046
-1036.0,76,147,161,1.0,1.0,1.0,SSp-bfd4,1047
-1037.0,111,59,166,1.0,1.0,1.0,GRN,1048
-1038.0,184,111,225,1.0,1.0,1.0,FL,1049
-1039.0,146,45,1,1.0,1.0,1.0,TTd3,1050
-1040.0,124,140,121,1.0,1.0,1.0,tspd,1051
-1041.0,153,215,162,1.0,1.0,1.0,PPN,1052
-1042.0,199,16,114,1.0,1.0,1.0,ACA2/3,1053
-1043.0,250,237,49,1.0,1.0,1.0,ILA6a,1054
-1044.0,88,215,69,1.0,1.0,1.0,eg,1055
-1045.0,31,95,26,1.0,1.0,1.0,ANcr1,1056
-1046.0,250,38,8,1.0,1.0,1.0,GU,1057
-1047.0,68,28,247,1.0,1.0,1.0,VISC5,1058
-1048.0,228,127,194,1.0,1.0,1.0,TTd4,1059
-1049.0,201,85,24,1.0,1.0,1.0,dtd,1060
-1050.0,171,252,85,1.0,1.0,1.0,PPT,1061
-1051.0,241,127,101,1.0,1.0,1.0,SSp-bfd6b,1062
-1052.0,60,46,195,1.0,1.0,1.0,hf,1063
-1053.0,185,41,25,1.0,1.0,1.0,ANcr2,1064
-1054.0,251,200,197,1.0,1.0,1.0,HB,1065
-1055.0,50,79,126,1.0,1.0,1.0,VISam2/3,1066
-1056.0,41,28,78,1.0,1.0,1.0,TTv1,1067
-1057.0,18,63,75,1.0,1.0,1.0,mfbst,1068
-1058.0,169,169,92,1.0,1.0,1.0,PPY,1069
-1059.0,90,190,105,1.0,1.0,1.0,SSp-bfd5,1070
-1060.0,114,183,208,1.0,1.0,1.0,rf,1071
-1061.0,82,106,129,1.0,1.0,1.0,MGd,1072
-1062.0,48,198,235,1.0,1.0,1.0,HEM,1073
-1063.0,198,225,127,1.0,1.0,1.0,VISal1,1074
-1064.0,60,84,94,1.0,1.0,1.0,TTv2,1075
-1065.0,75,69,80,1.0,1.0,1.0,cvb,1076
-1066.0,79,247,148,1.0,1.0,1.0,PR,1077
-1067.0,153,20,206,1.0,1.0,1.0,ri,1078
-1068.0,247,78,155,1.0,1.0,1.0,MGv,1079
-1069.0,66,149,131,1.0,1.0,1.0,HIP,1080
-1070.0,162,107,16,1.0,1.0,1.0,ILA6b,1081
-1071.0,242,65,237,1.0,1.0,1.0,TTv3,1082
-1072.0,174,197,120,1.0,1.0,1.0,mfbse,1083
-1073.0,133,74,143,1.0,1.0,1.0,PRE,1084
-1074.0,40,224,112,1.0,1.0,1.0,MOs6b,1085
-1075.0,84,251,62,1.0,1.0,1.0,SSp-tr4,1086
-1076.0,155,244,188,1.0,1.0,1.0,pce,1087
-1077.0,34,184,51,1.0,1.0,1.0,MGm,1088
-1078.0,45,75,140,1.0,1.0,1.0,HPF,1089
-1079.0,67,186,123,1.0,1.0,1.0,SSs5,1090
-1080.0,50,125,158,1.0,1.0,1.0,"CUL4, 5",1091
-1081.0,183,138,142,1.0,1.0,1.0,em,1092
-1082.0,60,118,116,1.0,1.0,1.0,PRNc,1093
-1083.0,104,24,149,1.0,1.0,1.0,SSp-ll4,1094
-1084.0,195,141,121,1.0,1.0,1.0,pcf,1095
-1085.0,203,194,181,1.0,1.0,1.0,AMd,1096
-1086.0,140,24,214,1.0,1.0,1.0,HY,1097
-1087.0,91,141,95,1.0,1.0,1.0,MDRNd,1098
-1088.0,210,223,44,1.0,1.0,1.0,fxs,1099
-1089.0,31,64,209,1.0,1.0,1.0,PRT,1100
-1090.0,234,41,149,1.0,1.0,1.0,AId5,1101
-1091.0,32,248,133,1.0,1.0,1.0,SSp-m6a,1102
-1092.0,131,67,156,1.0,1.0,1.0,pri,1103
-1093.0,173,76,198,1.0,1.0,1.0,AMv,1104
-1094.0,120,32,254,1.0,1.0,1.0,IA,1105
-1095.0,114,76,110,1.0,1.0,1.0,VISC2/3,1106
-1096.0,40,12,129,1.0,1.0,1.0,MDRNv,1107
-1097.0,133,157,101,1.0,1.0,1.0,ccg,1108
-1098.0,192,152,185,1.0,1.0,1.0,PS,1109
-1099.0,226,64,236,1.0,1.0,1.0,SUMl,1110
-1100.0,16,26,245,1.0,1.0,1.0,SSp-tr5,1111
-1101.0,0,94,83,1.0,1.0,1.0,psf,1112
-1102.0,254,175,86,1.0,1.0,1.0,IAD,1113
-1103.0,210,3,43,1.0,1.0,1.0,VISal4,1114
-1104.0,230,227,106,1.0,1.0,1.0,gVIIn,1116
-1105.0,147,100,16,1.0,1.0,1.0,P-sat,1117
-1106.0,211,225,234,1.0,1.0,1.0,SUMm,1118
-1107.0,213,225,124,1.0,1.0,1.0,ppf,1119
-1108.0,17,50,50,1.0,1.0,1.0,IAM,1120
-1109.0,230,143,89,1.0,1.0,1.0,ENTl1,1121
-1110.0,210,133,175,1.0,1.0,1.0,icp,1123
-1111.0,1,195,12,1.0,1.0,1.0,PSCH,1124
-1112.0,134,43,141,1.0,1.0,1.0,ORBvl5,1125
-1113.0,193,204,133,1.0,1.0,1.0,TMd,1126
-1114.0,241,57,168,1.0,1.0,1.0,TEa2/3,1127
-1115.0,98,153,164,1.0,1.0,1.0,SSp-ll5,1128
-1116.0,148,238,70,1.0,1.0,1.0,IB,1129
-1117.0,234,28,153,1.0,1.0,1.0,iVIIn,1131
-1118.0,61,175,199,1.0,1.0,1.0,P-sen,1132
-1119.0,216,165,77,1.0,1.0,1.0,ENTmv5/6,1133
-1120.0,30,61,9,1.0,1.0,1.0,NLOT3,1139
-1121.0,237,185,117,1.0,1.0,1.0,TR1,1140
-1122.0,254,230,74,1.0,1.0,1.0,TR2,1141
-1123.0,33,96,167,1.0,1.0,1.0,TR3,1142
-1124.0,228,188,169,1.0,1.0,1.0,CBXgr,1143
-1125.0,211,88,67,1.0,1.0,1.0,CBXmo,1144
-1126.0,105,169,122,1.0,1.0,1.0,CBXpu,1145
-1127.0,118,59,237,1.0,1.0,1.0,ME,10671
-1128.0,117,81,244,1.0,1.0,1.0,SIMgr,10672
-1129.0,251,19,191,1.0,1.0,1.0,SIMpu,10673
-1130.0,159,233,9,1.0,1.0,1.0,SIMmo,10674
-1131.0,184,91,27,1.0,1.0,1.0,ANcr1gr,10675
-1132.0,150,52,79,1.0,1.0,1.0,ANcr1pu,10676
-1133.0,94,9,188,1.0,1.0,1.0,ANcr1mo,10677
-1134.0,64,222,208,1.0,1.0,1.0,ANcr2gr,10678
-1135.0,34,71,24,1.0,1.0,1.0,ANcr2pu,10679
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diff --git a/annotation_volumes/allen2022_colours_updated.csv b/annotation_volumes/allen2022_colours_updated.csv
deleted file mode 100644
index 08921441d2d6f989fca142505c22bf59c8935e0a..0000000000000000000000000000000000000000
--- a/annotation_volumes/allen2022_colours_updated.csv
+++ /dev/null
@@ -1,1329 +0,0 @@
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diff --git a/annotation_volumes/annotation_10_2017.nrrd b/annotation_volumes/annotation_10_2017.nrrd
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diff --git a/annotation_volumes/annotation_25.nrrd b/annotation_volumes/annotation_25.nrrd
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diff --git a/annotation_volumes/itksnap_label_description_2022.txt b/annotation_volumes/itksnap_label_description_2022.txt
deleted file mode 100644
index ca27853270a0b5ee5eba587efd8609d20738004b..0000000000000000000000000000000000000000
--- a/annotation_volumes/itksnap_label_description_2022.txt
+++ /dev/null
@@ -1,1327 +0,0 @@
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-7 9 47 174 1 1 1 "grey - 8"
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-11 89 55 43 1 1 1 "IF - 12"
-12 226 85 176 1 1 1 "im - 14"
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-14 237 48 27 1 1 1 "6b - 16"
-15 197 147 134 1 1 1 "SCiw - 17"
-16 64 107 196 1 1 1 "nf - 18"
-17 159 28 70 1 1 1 "IG - 19"
-18 61 70 91 1 1 1 "ENTl2 - 20"
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-20 135 229 117 1 1 1 "PTLp - 22"
-21 158 58 212 1 1 1 "AAA - 23"
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-23 13 191 132 1 1 1 "SCdg - 26"
-24 30 250 64 1 1 1 "IGL - 27"
-25 37 198 60 1 1 1 "ENTl6a - 28"
-26 65 80 126 1 1 1 "sttl - 29"
-27 14 70 220 1 1 1 "PVa - 30"
-28 234 26 106 1 1 1 "ACA - 31"
-29 249 90 133 1 1 1 "VISp6a - 33"
-30 149 96 29 1 1 1 "icf - 34"
-31 191 86 92 1 1 1 "III - 35"
-32 193 47 29 1 1 1 "GU1 - 36"
-33 239 115 75 1 1 1 "lab - 37"
-34 36 221 231 1 1 1 "PVH - 38"
-35 28 233 97 1 1 1 "ACAd - 39"
-36 84 162 142 1 1 1 "VISpm2/3 - 41"
-37 2 53 79 1 1 1 "SCdw - 42"
-38 187 8 16 1 1 1 "apf - 43"
-39 77 214 145 1 1 1 "ILA - 44"
-40 189 214 193 1 1 1 "SPVOrdm - 45"
-41 79 233 75 1 1 1 "mfbsma - 46"
-42 193 119 121 1 1 1 "PVHam - 47"
-43 75 115 20 1 1 1 "ACAv - 48"
-44 58 42 224 1 1 1 "ipf - 49"
-45 127 0 110 1 1 1 "PRC - 50"
-46 217 219 143 1 1 1 "ILM - 51"
-47 94 85 58 1 1 1 "ENTl3 - 52"
-48 95 147 238 1 1 1 "SPVOmdmd - 53"
-49 87 204 113 1 1 1 "mfb - 54"
-50 118 196 53 1 1 1 "PVHap - 55"
-51 99 31 240 1 1 1 "ACB - 56"
-52 199 229 136 1 1 1 "pms - 57"
-53 202 78 239 1 1 1 "MT - 58"
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-1016 47 22 84 1 1 1 "AUDpo - 1027"
-1017 17 141 189 1 1 1 "cstu - 1028"
-1018 231 95 18 1 1 1 "POL - 1029"
-1019 231 191 121 1 1 1 "SSp-ll1 - 1030"
-1020 65 26 105 1 1 1 "GPi - 1031"
-1021 205 161 247 1 1 1 "grv of CTX - 1032"
-1022 182 48 240 1 1 1 "COPY - 1033"
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-1024 62 217 174 1 1 1 "SSs4 - 1035"
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-1031 179 63 155 1 1 1 "TTd2 - 1042"
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-1037 111 59 166 1 1 1 "GRN - 1048"
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-1144 38 159 224 1 1 1 "PFLpu - 10688"
-1145 107 63 153 1 1 1 "PFLmo - 10689"
-1146 175 124 167 1 1 1 "FLgr - 10690"
-1147 218 33 63 1 1 1 "FLpu - 10691"
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-1149 254 179 187 1 1 1 "PAR1 - 10693"
-1150 108 249 33 1 1 1 "PAR2 - 10694"
-1151 180 148 245 1 1 1 "PAR3 - 10695"
-1152 137 151 64 1 1 1 "POST1 - 10696"
-1153 25 104 172 1 1 1 "POST2 - 10697"
-1154 143 168 132 1 1 1 "POST3 - 10698"
-1155 95 149 16 1 1 1 "PRE1 - 10699"
-1156 225 21 203 1 1 1 "PRE2 - 10700"
-1157 162 215 93 1 1 1 "PRE3 - 10701"
-1158 187 152 122 1 1 1 "DG-sgz - 10702"
-1159 140 210 52 1 1 1 "DG-mo - 10703"
-1160 220 23 128 1 1 1 "DG-po - 10704"
-1161 133 70 160 1 1 1 "LINGgr - 10705"
-1162 228 48 9 1 1 1 "LINGpu - 10706"
-1163 147 54 242 1 1 1 "LINGmo - 10707"
-1164 48 95 59 1 1 1 "CENT2gr - 10708"
-1165 202 129 36 1 1 1 "CENT2pu - 10709"
-1166 16 77 65 1 1 1 "CENT2mo - 10710"
-1167 54 63 206 1 1 1 "CENT3gr - 10711"
-1168 235 165 90 1 1 1 "CENT3pu - 10712"
-1169 125 80 218 1 1 1 "CENT3mo - 10713"
-1170 143 188 75 1 1 1 "CUL4gr - 10714"
-1171 209 62 113 1 1 1 "CUL4pu - 10715"
-1172 94 20 232 1 1 1 "CUL4mo - 10716"
-1173 160 149 180 1 1 1 "CUL5gr - 10717"
-1174 222 138 233 1 1 1 "CUL5pu - 10718"
-1175 50 161 113 1 1 1 "CUL5mo - 10719"
-1176 113 223 61 1 1 1 "CUL4, 5gr - 10720"
-1177 1 88 3 1 1 1 "CUL4, 5pu - 10721"
-1178 214 33 67 1 1 1 "CUL4, 5mo - 10722"
-1179 14 68 102 1 1 1 "DECgr - 10723"
-1180 113 185 67 1 1 1 "DECpu - 10724"
-1181 50 145 32 1 1 1 "DECmo - 10725"
-1182 43 104 15 1 1 1 "FOTUgr - 10726"
-1183 252 189 254 1 1 1 "FOTUpu - 10727"
-1184 248 218 240 1 1 1 "FOTUmo - 10728"
-1185 82 6 47 1 1 1 "PYRgr - 10729"
-1186 119 25 101 1 1 1 "PYRpu - 10730"
-1187 94 165 46 1 1 1 "PYRmo - 10731"
-1188 126 111 97 1 1 1 "UVUgr - 10732"
-1189 211 38 74 1 1 1 "UVUpu - 10733"
-1190 111 30 39 1 1 1 "UVUmo - 10734"
-1191 188 237 227 1 1 1 "NODgr - 10735"
-1192 221 45 54 1 1 1 "NODpu - 10736"
-1193 138 215 177 1 1 1 "NODmo - 10737"
-1194 52 34 196 1 1 1 "SS1 - 12993"
-1195 7 27 105 1 1 1 "SS2/3 - 12994"
-1196 44 28 41 1 1 1 "SS4 - 12995"
-1197 221 16 141 1 1 1 "SS5 - 12996"
-1198 6 182 57 1 1 1 "SS6a - 12997"
-1199 156 213 87 1 1 1 "SS6b - 12998"
-1200 100 33 26 1 1 1 "SSp-un - 182305689"
-1201 246 156 164 1 1 1 "SSp-un1 - 182305693"
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-1203 7 106 118 1 1 1 "SSp-un4 - 182305701"
-1204 113 52 137 1 1 1 "SSp-un5 - 182305705"
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-1215 198 54 121 1 1 1 "VISli - 312782574"
-1216 217 126 97 1 1 1 "VISli1 - 312782578"
-1217 162 141 96 1 1 1 "VISli2/3 - 312782582"
-1218 229 172 225 1 1 1 "VISli4 - 312782586"
-1219 180 57 11 1 1 1 "VISli5 - 312782590"
-1220 35 241 23 1 1 1 "VISli6a - 312782594"
-1221 82 234 9 1 1 1 "VISli6b - 312782598"
-1222 68 59 4 1 1 1 "VISrl1 - 312782604"
-1223 146 68 174 1 1 1 "VISrl2/3 - 312782608"
-1224 83 75 136 1 1 1 "VISrl4 - 312782612"
-1225 149 186 122 1 1 1 "VISrl5 - 312782616"
-1226 166 232 127 1 1 1 "VISrl6a - 312782620"
-1227 131 50 39 1 1 1 "VISrl6b - 312782624"
-1228 12 11 168 1 1 1 "VISpor - 312782628"
-1229 53 98 188 1 1 1 "VISpor1 - 312782632"
-1230 21 221 221 1 1 1 "VISpor2/3 - 312782636"
-1231 95 59 211 1 1 1 "VISpor4 - 312782640"
-1232 7 220 187 1 1 1 "VISpor5 - 312782644"
-1233 22 168 44 1 1 1 "VISpor6a - 312782648"
-1234 58 162 72 1 1 1 "VISpor6b - 312782652"
-1235 36 206 205 1 1 1 "VISrll - 480149202"
-1236 63 209 152 1 1 1 "VISrll1 - 480149206"
-1237 122 145 13 1 1 1 "VISrll2/3 - 480149210"
-1238 66 143 206 1 1 1 "VISrll4 - 480149214"
-1239 180 193 233 1 1 1 "VISrll5 - 480149218"
-1240 231 50 196 1 1 1 "VISrll6a - 480149222"
-1241 226 216 234 1 1 1 "VISrll6b - 480149226"
-1242 206 196 187 1 1 1 "VISlla - 480149230"
-1243 31 93 221 1 1 1 "VISlla1 - 480149234"
-1244 191 209 156 1 1 1 "VISlla2/3 - 480149238"
-1245 1 55 70 1 1 1 "VISlla4 - 480149242"
-1246 37 32 81 1 1 1 "VISlla5 - 480149246"
-1247 77 234 201 1 1 1 "VISlla6a - 480149250"
-1248 162 65 100 1 1 1 "VISlla6b - 480149254"
-1249 170 17 30 1 1 1 "VISmma - 480149258"
-1250 86 59 151 1 1 1 "VISmma1 - 480149262"
-1251 139 77 20 1 1 1 "VISmma2/3 - 480149266"
-1252 96 190 162 1 1 1 "VISmma4 - 480149270"
-1253 244 34 225 1 1 1 "VISmma5 - 480149274"
-1254 239 44 165 1 1 1 "VISmma6a - 480149278"
-1255 146 104 187 1 1 1 "VISmma6b - 480149282"
-1256 107 151 172 1 1 1 "VISmmp - 480149286"
-1257 46 136 65 1 1 1 "VISmmp1 - 480149290"
-1258 42 1 184 1 1 1 "VISmmp2/3 - 480149294"
-1259 115 79 184 1 1 1 "VISmmp4 - 480149298"
-1260 242 69 229 1 1 1 "VISmmp5 - 480149302"
-1261 99 168 89 1 1 1 "VISmmp6a - 480149306"
-1262 235 39 172 1 1 1 "VISmmp6b - 480149310"
-1263 94 106 59 1 1 1 "VISm - 480149314"
-1264 131 147 19 1 1 1 "VISm1 - 480149318"
-1265 144 29 124 1 1 1 "VISm2/3 - 480149322"
-1266 222 146 203 1 1 1 "VISm4 - 480149326"
-1267 84 189 49 1 1 1 "VISm5 - 480149330"
-1268 217 89 56 1 1 1 "VISm6a - 480149334"
-1269 82 99 186 1 1 1 "VISm6b - 480149338"
-1270 211 103 156 1 1 1 "ProS - 484682470"
-1271 73 26 12 1 1 1 "ProSd - 484682475"
-1272 214 73 73 1 1 1 "ProSd-m - 484682479"
-1273 78 132 252 1 1 1 "ProSd-sp - 484682483"
-1274 82 147 52 1 1 1 "ProSd-sr - 484682487"
-1275 188 236 190 1 1 1 "ProSv - 484682492"
-1276 2 205 195 1 1 1 "ProSv-m - 484682496"
-1277 60 6 189 1 1 1 "ProSv-sp - 484682500"
-1278 42 149 90 1 1 1 "Prosv-sr - 484682504"
-1279 241 174 245 1 1 1 "APr - 484682508"
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-1281 7 135 129 1 1 1 "ccb - 484682516"
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-1283 145 156 130 1 1 1 "ar - 484682524"
-1284 170 199 77 1 1 1 "stc - 484682528"
-1285 162 223 228 1 1 1 "LGd-sh - 496345664"
-1286 85 73 94 1 1 1 "LGd-co - 496345668"
-1287 92 45 167 1 1 1 "LGd-ip - 496345672"
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-1291 201 115 40 1 1 1 "ORBm6b - 527696977"
-1292 220 208 119 1 1 1 "LSS - 549009199"
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-1294 71 130 122 1 1 1 "InCo - 549009207"
-1295 205 150 224 1 1 1 "MA3 - 549009211"
-1296 203 98 18 1 1 1 "P5 - 549009215"
-1297 63 140 133 1 1 1 "Acs5 - 549009219"
-1298 144 136 52 1 1 1 "PC5 - 549009223"
-1299 83 190 194 1 1 1 "I5 - 549009227"
-1300 98 1 146 1 1 1 "Eth - 560581551"
-1301 148 62 164 1 1 1 "REth - 560581555"
-1302 24 91 121 1 1 1 "Xi - 560581559"
-1303 189 171 43 1 1 1 "PIL - 560581563"
-1304 116 210 168 1 1 1 "PoT - 563807435"
-1305 64 176 54 1 1 1 "IntG - 563807439"
-1306 188 14 190 1 1 1 "VMPO - 576073699"
-1307 117 253 191 1 1 1 "PeF - 576073704"
-1308 181 38 206 1 1 1 "HATA - 589508447"
-1309 61 217 136 1 1 1 "Pa5 - 589508451"
-1310 149 235 252 1 1 1 "VeCB - 589508455"
-1311 8 125 240 1 1 1 "SCO - 599626923"
-1312 123 208 45 1 1 1 "PDTg - 599626927"
-1313 119 78 176 1 1 1 "MMl - 606826647"
-1314 78 10 28 1 1 1 "MMm - 606826651"
-1315 92 236 23 1 1 1 "MMp - 606826655"
-1316 249 73 179 1 1 1 "MMd - 606826659"
-1317 247 145 28 1 1 1 "Pa4 - 606826663"
-1318 95 83 50 1 1 1 "PN - 607344830"
-1319 37 180 73 1 1 1 "IPR - 607344834"
-1320 59 118 147 1 1 1 "IPC - 607344838"
-1321 106 74 141 1 1 1 "IPA - 607344842"
-1322 119 83 96 1 1 1 "IPL - 607344846"
-1323 119 95 65 1 1 1 "IPI - 607344850"
-1324 7 73 191 1 1 1 "IPDM - 607344854"
-1325 187 228 175 1 1 1 "IPDL - 607344858"
-1326 224 228 204 1 1 1 "IPRL - 607344862"
-1327 214 229 231 1 1 1 "Su3 - 614454277"
diff --git a/messing_around_files/dream_workflow.py b/messing_around_files/dream_workflow.py
new file mode 100644
index 0000000000000000000000000000000000000000..1904c4332d761248150dda41755c3034946c8b52
--- /dev/null
+++ b/messing_around_files/dream_workflow.py
@@ -0,0 +1,34 @@
+import PyNutil
+
+# define parameters
+# specify loacation of segmentation folder
+segmentation_folder = r"blabla/blabla"
+# specify location of json file
+json_file = r"blabla/blabla.json"
+# specify colour to quantify
+colour = [255, 255, 255]
+# specify output location
+output_path = r"blabla/blabla/output"
+
+quantifier = PyNutil(segmentation_folder, json_file, colour, output_path)
+
+quantifier.build_quantifier()
+
+# define your mask as either a png, or a qcalign damage map
+# this mask will be applied to all
+quantifier.load_mask(mask_path=r"blablabla/")
+
+# load a custom region file
+quantifier.load_custom_regions(custom_region_json=r"blablabla/")
+# run coordinate extraction
+# ideally extract coordinates per section and whole brain
+quantifier.get_coordinates()
+
+quantifier.save_coordinates()
+
+quantifier.get_objects()
+
+quantifier.get_loads()
+
+
+quantifier.save_segmentation_atlas_overlays()
diff --git a/PyNutil/load_workflow.py b/messing_around_files/load_workflow.py
similarity index 70%
rename from PyNutil/load_workflow.py
rename to messing_around_files/load_workflow.py
index 140221a60febad3f149e33338bbe9829d28c97d0..1d7d4131b27fd525829313c9180f9223936ea640 100644
--- a/PyNutil/load_workflow.py
+++ b/messing_around_files/load_workflow.py
@@ -7,62 +7,62 @@ import numpy as np
from read_and_write import FlattoArray, LabeltoArray
-base= r"../test_data/tTA_2877_NOP_s037_atlasmap/2877_NOP_tTA_lacZ_Xgal_s037_nl.flat"
+base = r"../test_data/tTA_2877_NOP_s037_atlasmap/2877_NOP_tTA_lacZ_Xgal_s037_nl.flat"
label = r"../annotation_volumes\allen2017_colours.csv"
image_arr = FlattoArray(base)
plt.imshow(FlattoArray(base))
-"""assign label file values into image array"""
+"""assign label file values into image array"""
labelfile = pd.read_csv(r"../annotation_volumes\allen2017_colours.csv")
-allen_id_image = np.zeros((h,w)) # create an empty image array
+allen_id_image = np.zeros((h, w)) # create an empty image array
coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h)))
-values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values
-lbidx = labelfile['idx'].values
-allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
+values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values
+lbidx = labelfile["idx"].values
+allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
plt.imshow(allen_id_image)
"""count pixels for unique idx"""
unique_ids, counts = np.unique(allen_id_image, return_counts=True)
-area_per_label = list(zip(unique_ids,counts))
+area_per_label = list(zip(unique_ids, counts))
# create a list of unique regions and pixel counts per region
-df_area_per_label = pd.DataFrame(area_per_label, columns=["idx","area_count"])
+df_area_per_label = pd.DataFrame(area_per_label, columns=["idx", "area_count"])
# create a pandas df with regions and pixel counts
"""add region name and colours corresponding to each idx into dataframe.
This could be a separate function"""
-df_label_colours =pd.read_csv(label, sep=",")
+df_label_colours = pd.read_csv(label, sep=",")
# find colours corresponding to each region ID and add to the pandas dataframe
-#look up name, r, g, b in df_allen_colours in df_area_per_label based on "idx"
+# look up name, r, g, b in df_allen_colours in df_area_per_label based on "idx"
new_rows = []
for index, row in df_area_per_label.iterrows():
- mask = df_label_colours["idx"] == row["idx"]
+ mask = df_label_colours["idx"] == row["idx"]
current_region_row = df_label_colours[mask]
current_region_name = current_region_row["name"].values
current_region_red = current_region_row["r"].values
current_region_green = current_region_row["g"].values
current_region_blue = current_region_row["b"].values
- row["name"] = current_region_name[0]
+ row["name"] = current_region_name[0]
row["r"] = current_region_red[0]
row["g"] = current_region_green[0]
row["b"] = current_region_blue[0]
-
+
new_rows.append(row)
df_area_per_label_name = pd.DataFrame(new_rows)
print(df_area_per_label_name)
-df_area_per_label_name.to_csv("../outputs/test5_s037_area_per_idx.csv", sep=";", na_rep='', index= False)
-
-
+df_area_per_label_name.to_csv(
+ "../outputs/test5_s037_area_per_idx.csv", sep=";", na_rep="", index=False
+)
# Count area per unique label in one flat file - done.
diff --git a/messing_around_files/oop_example.py b/messing_around_files/oop_example.py
new file mode 100644
index 0000000000000000000000000000000000000000..80e6b963b259cb120ad7e7a0862062fc61362374
--- /dev/null
+++ b/messing_around_files/oop_example.py
@@ -0,0 +1,7 @@
+class Demo:
+ def __init__(self, test):
+ self.test = test
+
+ def print_test(self):
+ print(self.test)
+ self.output = "success"
diff --git a/PyNutil/pyflat.py b/messing_around_files/pyflat.py
similarity index 100%
rename from PyNutil/pyflat.py
rename to messing_around_files/pyflat.py
diff --git a/messing_around_files/testing_openflatfile.py b/messing_around_files/testing_openflatfile.py
new file mode 100644
index 0000000000000000000000000000000000000000..bc02f9546d82010dc0d86bf0aa22928939ec8a73
--- /dev/null
+++ b/messing_around_files/testing_openflatfile.py
@@ -0,0 +1,81 @@
+base = r"../test_data\ttA_2877_NOP_atlasmaps\2877_NOP_tTA_lacZ_Xgal_s037_nl.flat"
+import numpy as np
+import struct
+import pandas as pd
+import matplotlib.pyplot as plt
+import cv2
+
+"""read flat file and write into an np array"""
+np.set_printoptions(suppress=True)
+with open(base, "rb") as f:
+ # i dont know what b is, w and h are the width and height that we get from the
+ # flat file header
+ b, w, h = struct.unpack(">BII", f.read(9))
+ # data is a one dimensional list of values
+ # it has the shape width times height
+ data = struct.unpack(">" + ("xBH"[b] * (w * h)), f.read(b * w * h))
+
+ # convert flat file data into an array, previously data was a tuple
+ imagedata = np.array(data)
+
+ # create an empty image array in the right shape,
+ image = np.zeros((h, w))
+ # pallette = dict(zip(np.unique(data), np.random.randint(0,255,len(np.unique(data)))))
+
+ # assign values from flat file into the image array
+ for x in range(w):
+ for y in range(h):
+ image[y, x] = imagedata[x + y * w]
+
+ image_arr = np.array(image)
+ print(image_arr.shape)
+ image_arr = cv2.resize(image_arr, (9848, 12784), interpolation=cv2.INTER_NEAREST)
+ print(image_arr.shape)
+ val, count = np.unique(image_arr, return_counts=True)
+ print(list(zip(val, count)))
+
+# show image with plt.imshow(image_arr)
+
+"""assign label file values into image array"""
+
+labelfile = pd.read_csv(r"metadata/annotation_volumes\allen2017_colours.csv")
+labelfile[]
+print(list(zip(val,count)))
+
+
+temp_copy = labelfile.loc[val.astype(int),:].copy()
+
+temp_copy['region areas'] = count
+
+temp_copy.to_csv('../outputs/region_areas_quick_test.csv',sep=';')
+
+allen_id_image = np.zeros((h, w)) # create an empty image array
+
+"""for ph in range(h):
+ for pw in range(w):
+ value_in_data_at_pixel = int(image_arr[ph,pw])
+ allen_id_image[ph, pw] = labelfile.loc[value_in_data_at_pixel, 'idx']"""
+
+"""for efficiency, vectorize instead of using the for loops above"""
+coordsy, coordsx = np.meshgrid(list(range(w)), list(range(h)))
+values = image_arr[coordsx, coordsy] # assign x,y coords from image_array into values
+lbidx = labelfile["idx"].values
+allen_id_image = lbidx[values.astype(int)] # assign allen IDs into image array
+
+
+"""count pixels for unique idx"""
+unique_ids, counts = np.unique(allen_id_image, return_counts=True)
+
+area_per_label = list(zip(unique_ids, counts))
+# create a list of unique regions and pixel counts per region
+
+df_area_per_label = pd.DataFrame(area_per_label, columns=["idx", "area_count"])
+# create a pandas df with regions and pixel counts
+
+print(df_area_per_label)
+df_area_per_label.to_csv(
+ "../outputs/s037_area_per_idx.csv", sep=";", na_rep="", index=False
+)
+
+# df_label_colours =pd.read_csv(label_colours, sep=",")
+# find colours corresponding to each region ID and add to the pandas dataframe
diff --git a/PyNutil/testing_sharon.py b/messing_around_files/testing_sharon.py
similarity index 56%
rename from PyNutil/testing_sharon.py
rename to messing_around_files/testing_sharon.py
index 0a4b18838196fd11d7234a8609c859c5cca3561a..b5c40038ce98313ea984ae6c9c80d6e2a62674cc 100644
--- a/PyNutil/testing_sharon.py
+++ b/messing_around_files/testing_sharon.py
@@ -1,43 +1,37 @@
-
import subprocess
import sys
import os
import glob
-dir = ('../test_data/ttA_2877_NOP_atlasmaps')
+dir = "../test_data/ttA_2877_NOP_atlasmaps"
"""fetch file names in a directory"""
+
def FilesinDirectory(directory):
for file in os.scandir(directory):
if file.path.endswith(".flat") and file.is_file:
- #print(filename.path)
- #newfilename, file_ext = os.path.splitext(filename)
- #print(newfilename)
+ # print(filename.path)
+ # newfilename, file_ext = os.path.splitext(filename)
+ # print(newfilename)
filename = os.path.basename(file)
newfilename, file_ext = os.path.splitext(filename)
return newfilename
-#Question: how to return multiple file names into a list?
+
+# Question: how to return multiple file names into a list?
files = []
-newfiles = files.append(FilesinDirectory('../test_data/ttA_2877_NOP_atlasmaps'))
+newfiles = files.append(FilesinDirectory("../test_data/ttA_2877_NOP_atlasmaps"))
print(files)
-
-
-
import os
# file name with extension
-file_name = os.path.basename('../test_data/ttA_2877_NOP_atlasmaps')
+file_name = os.path.basename("../test_data/ttA_2877_NOP_atlasmaps")
print(file_name)
# file name without extension
print(os.path.splitext(file_name)[0])
-
-
-
-
diff --git a/scripts/reformat_label_files.py b/scripts/reformat_label_files.py
index 23904bac805494221e7a02faf291097fed66d703..8df1443b9b46783527ddb644997fde2b963ccb51 100644
--- a/scripts/reformat_label_files.py
+++ b/scripts/reformat_label_files.py
@@ -2,50 +2,151 @@ import pandas as pd
"""reformat itksnap_label_description_2022.txt"""
+
+
def reformat_allen_label(inputpath, outputpath):
- df = pd.read_csv(inputpath, sep=" ", header=None, names=["row", "r", "g", "b", "a", "VIS", "MSH", "name"])
-
+ df = pd.read_csv(
+ inputpath,
+ sep=" ",
+ header=None,
+ names=["row", "r", "g", "b", "a", "VIS", "MSH", "name"],
+ )
+
# this is to reformat the name to allenID
- df[["name", "idx"]] = df["name"].str.split(' - ', expand=True)
- # this is to add on "root" as this was missing from the Allen file
- df = df.append({"idx": 0, "name": "background", "r": 255, "g": 255, "b": 255, "a": 1.0, "VIS":1.0, "MSH":1.0}, ignore_index=True)
-
+ df[["name", "idx"]] = df["name"].str.split(" - ", expand=True)
+ # this is to add on "root" as this was missing from the Allen file
+ df = df.append(
+ {
+ "idx": 0,
+ "name": "background",
+ "r": 255,
+ "g": 255,
+ "b": 255,
+ "a": 1.0,
+ "VIS": 1.0,
+ "MSH": 1.0,
+ },
+ ignore_index=True,
+ )
+
df
- reordered_df = df.loc[:,["idx", "r", "g", "b", "a", "VIS", "MSH", "name", "row"]]
+ reordered_df = df.loc[:, ["idx", "r", "g", "b", "a", "VIS", "MSH", "name", "row"]]
reordered_df.to_csv(outputpath, index=False)
-reformat_allen_label("../annotation_volumes/itksnap_label_description_2022.txt","../annotation_volumes/allen2022_colours_updated.csv")
+
+reformat_allen_label(
+ "../annotation_volumes/itksnap_label_description_2022.txt",
+ "../annotation_volumes/allen2022_colours_updated.csv",
+)
"""reformat AllenMouseBrain_atlas_CCF_2017.label, add clear label to first row"""
+
+
def reformat_label(inputpath, outputpath):
- df = pd.read_csv(inputpath, sep = "\t", header=None, skiprows=15 ,names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"] )
- df_clear = pd.DataFrame({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0},index=[0])
+ df = pd.read_csv(
+ inputpath,
+ sep="\t",
+ header=None,
+ skiprows=15,
+ names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"],
+ )
+ df_clear = pd.DataFrame(
+ {
+ "idx": 0,
+ "name": "Clear Label",
+ "r": 0,
+ "g": 0,
+ "b": 0,
+ "a": 1.0,
+ "VIS": 1.0,
+ "MSH": 1.0,
+ },
+ index=[0],
+ )
df = pd.concat([df_clear, df])
df.to_csv(outputpath, index=False)
-reformat_label("../annotation_volumes/AllenMouseBrain_Atlas_CCF_2017.label","../annotation_volumes/allen2017_colours.csv")
+
+reformat_label(
+ "../annotation_volumes/AllenMouseBrain_Atlas_CCF_2017.label",
+ "../annotation_volumes/allen2017_colours.csv",
+)
"""reformat AllenMouseBrain_atlas_CCF_2015.label, add clear label to first row"""
+
+
def reformat_label(inputpath, outputpath):
- df = pd.read_csv(inputpath, sep = "\t", header=None, skiprows=15 ,names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"] )
- df_clear = pd.DataFrame({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, index=[0])
+ df = pd.read_csv(
+ inputpath,
+ sep="\t",
+ header=None,
+ skiprows=15,
+ names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"],
+ )
+ df_clear = pd.DataFrame(
+ {
+ "idx": 0,
+ "name": "Clear Label",
+ "r": 0,
+ "g": 0,
+ "b": 0,
+ "a": 1.0,
+ "VIS": 1.0,
+ "MSH": 1.0,
+ },
+ index=[0],
+ )
df = pd.concat([df_clear, df])
- #df = df.append({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, ignore_index=True)
+ # df = df.append({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, ignore_index=True)
df.to_csv(outputpath, index=False)
-reformat_label("../annotation_volumes/AllenMouseBrain_Atlas_CCF_2015.label","../annotation_volumes/allen2015_colours.csv")
+
+reformat_label(
+ "../annotation_volumes/AllenMouseBrain_Atlas_CCF_2015.label",
+ "../annotation_volumes/allen2015_colours.csv",
+)
"""reformat WHS_rat_atlas"""
+
+
def reformat_WHS_label(inputpath, outputpath):
- df = pd.read_csv(inputpath, sep = "\s+", header=None, skiprows=15 ,names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"] )
- #df = df.append({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, ignore_index=True)
- df_clear = pd.DataFrame({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, index=[0])
+ df = pd.read_csv(
+ inputpath,
+ sep="\s+",
+ header=None,
+ skiprows=15,
+ names=["idx", "r", "g", "b", "a", "VIS", "MSH", "name"],
+ )
+ # df = df.append({"idx": 0, "name": "Clear Label", "r": 0, "g": 0, "b": 0, "a": 1.0, "VIS":1.0, "MSH":1.0}, ignore_index=True)
+ df_clear = pd.DataFrame(
+ {
+ "idx": 0,
+ "name": "Clear Label",
+ "r": 0,
+ "g": 0,
+ "b": 0,
+ "a": 1.0,
+ "VIS": 1.0,
+ "MSH": 1.0,
+ },
+ index=[0],
+ )
df = pd.concat([df_clear, df])
df.to_csv(outputpath, index=False)
-reformat_WHS_label("../annotation_volumes/WHS_SD_rat_atlas_v4.label","../annotation_volumes/WHS_v4_colours.csv")
-reformat_WHS_label("../annotation_volumes/WHS_Atlas_Rat_Brain_v3.label","../annotation_volumes/WHS_v3_colours.csv")
-reformat_WHS_label("../annotation_volumes/WHS_Atlas_Rat_Brain_v2.label","../annotation_volumes/WHS_v2_colours.csv")
\ No newline at end of file
+
+reformat_WHS_label(
+ "../annotation_volumes/WHS_SD_rat_atlas_v4.label",
+ "../annotation_volumes/WHS_v4_colours.csv",
+)
+reformat_WHS_label(
+ "../annotation_volumes/WHS_Atlas_Rat_Brain_v3.label",
+ "../annotation_volumes/WHS_v3_colours.csv",
+)
+reformat_WHS_label(
+ "../annotation_volumes/WHS_Atlas_Rat_Brain_v2.label",
+ "../annotation_volumes/WHS_v2_colours.csv",
+)
diff --git a/scripts/reorient_allen_volume.py b/scripts/reorient_allen_volume.py
index e5bbf128f8152b4b7df22fa78c58add4dbeb469e..3de509abc5ec59c3c33eeeaea63c1ee00a02fa01 100644
--- a/scripts/reorient_allen_volume.py
+++ b/scripts/reorient_allen_volume.py
@@ -5,10 +5,11 @@ orientation of meshview coordinates.
import nrrd
import numpy as np
-data, header = nrrd.read('../annotation_volumes/annotation_10.nrrd')
+
+data, header = nrrd.read("../annotation_volumes/annotation_10.nrrd")
# change the order of the axes
-data = np.transpose(data, (2,0,1))
+data = np.transpose(data, (2, 0, 1))
# flip two of the axes
data = data[:, ::-1, ::-1]
# write the new volume
-nrrd.write('../annotation_volumes/annotation_10_reoriented.nrrd', data, header=header)
+nrrd.write("../annotation_volumes/annotation_10_reoriented.nrrd", data, header=header)
diff --git a/test/PVMouse_81264_test.json b/test/PVMouse_81264_test.json
new file mode 100644
index 0000000000000000000000000000000000000000..963261b9e52e6b2de2652574d88c62e562dba571
--- /dev/null
+++ b/test/PVMouse_81264_test.json
@@ -0,0 +1,7 @@
+{ "volume_path": "allen2017",
+ "label_path": "annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "test_data/ext-d000033_PVMouseExtraction_pub-Nutil_Quantifier_analysis-81264-Input_dir",
+ "alignment_json": "test_data/PVMouse_81264_nonlin.json",
+ "nonlinear": true,
+ "colour": [255, 0, 0]
+}
\ No newline at end of file
diff --git a/test/test1.json b/test/test1.json
index c8f58ec3c54cc8e5649e636deb7c52b2ae2cbd58..0355d8ca22ff7b021d36eac2a7dce534117df2c0 100644
--- a/test/test1.json
+++ b/test/test1.json
@@ -1,9 +1,9 @@
-{ "volume_path": "../annotation_volumes/annotation_10_reoriented_2017.nrrd",
- "label_path": "../annotation_volumes/allen2017_colours.csv",
- "segmentation_folder": "../test_data/ttA_2877_NOP_segmentations",
- "alignment_json": "../test_data/ttA_2877_NOP_horizontal_final_2017.json",
+{ "volume_path": "allen2017",
+ "label_path": "annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "test_data/ttA_2877_NOP_segmentations",
+ "alignment_json": "test_data/ttA_2877_NOP_horizontal_final_2017.json",
"nonlinear": true,
"colour": [0, 0, 255],
- "points_json_path": "../outputs/test1_points.json",
- "counts_per_label_name": "../outputs/test1_counts_per_allenID_2017.csv"
+ "points_json_path": "outputs/test1_points.json",
+ "counts_per_label_name": "outputs/test1_counts_per_allenID_2017.csv"
}
\ No newline at end of file
diff --git a/test/test3.json b/test/test3.json
index 93d869b273362cd6aa3d923b29ce0b65160f1f08..1c9343f895c732d928da65a84999da0602e8c1c6 100644
--- a/test/test3.json
+++ b/test/test3.json
@@ -1,9 +1,9 @@
-{ "volume_path": "../annotation_volumes/annotation_10_reoriented.nrrd",
- "label_path": "../annotation_volumes/allen2022_colours.csv",
- "segmentation_folder": "../test_data/oneSection15",
- "alignment_json": "../test_data/C68_nonlinear.json",
+{ "volume_path": "allen2017",
+ "label_path": "annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "test_data/oneSection15",
+ "alignment_json": "test_data/C68_nonlinear.json",
"nonlinear": true,
"colour": [255, 0, 255],
- "points_json_path": "../outputs/test3_points.json",
- "counts_per_label_name": "../outputs/test3_counts_per_idx.csv"
+ "points_json_path": "outputs/test3_points.json",
+ "counts_per_label_name": "outputs/test3_counts_per_idx.csv"
}
\ No newline at end of file
diff --git a/test/test4_2017.json b/test/test4_2017.json
index 9589000abca943cf75c693aee4958d46e26c42e1..bdb39595a190b78c31207f8efd7b4bdfbd56d29d 100644
--- a/test/test4_2017.json
+++ b/test/test4_2017.json
@@ -1,9 +1,9 @@
-{ "volume_path": "../annotation_volumes/annotation_10_reoriented_2017.nrrd",
- "label_path": "../annotation_volumes/allen2017_colours.csv",
- "segmentation_folder": "../test_data/oneSection15",
- "alignment_json": "../test_data/C68_nonlinear_no_markers.json",
+{ "volume_path": "allen2017",
+ "label_path": "annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "test_data/oneSection15",
+ "alignment_json": "test_data/C68_nonlinear_no_markers.json",
"nonlinear": true,
"colour": [255, 0, 255],
- "points_json_path": "../outputs/test4_points.json",
- "counts_per_label_name": "../outputs/test4_counts_per_allen2017.csv"
+ "points_json_path": "outputs/test4_points.json",
+ "counts_per_label_name": "outputs/test4_counts_per_allen2017.csv"
}
\ No newline at end of file
diff --git a/test/test5_NOP_s037.json b/test/test5_NOP_s037.json
index 76b2b27790a0c70c3c776bda8036fdbba014022b..d53d90f0d0d14d480620f8d578c15ccbced27db7 100644
--- a/test/test5_NOP_s037.json
+++ b/test/test5_NOP_s037.json
@@ -1,10 +1,10 @@
-{ "volume_path": "../annotation_volumes/annotation_10_reoriented_2017.nrrd",
- "label_path": "../annotation_volumes/allen2017_colours.csv",
- "segmentation_folder": "../test_data/ttA_2877_NOP_s037_seg",
- "alignment_json": "../test_data/ttA_2877_NOP_horizontal_final_2017.json",
- "nonlinear": true,
+{ "volume_path": "allen2017",
+ "label_path": "annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "test_data/ttA_2877_NOP_s037_seg",
+ "alignment_json": "test_data/ttA_2877_NOP_horizontal_final_2017.json",
+ "nonlinear": false,
"colour": [0, 0, 255],
- "points_json_path": "../outputs/test5_points.json",
- "counts_per_label_name": "../outputs/test5_counts_per_allenID_2017.csv"
+ "points_json_path": "outputs/test5_points.json",
+ "counts_per_label_name": "outputs/test5_counts_per_allenID_2017_false.csv"
}
diff --git a/test/test6_artifical.json b/test/test6_artifical.json
new file mode 100644
index 0000000000000000000000000000000000000000..c8f58ec3c54cc8e5649e636deb7c52b2ae2cbd58
--- /dev/null
+++ b/test/test6_artifical.json
@@ -0,0 +1,9 @@
+{ "volume_path": "../annotation_volumes/annotation_10_reoriented_2017.nrrd",
+ "label_path": "../annotation_volumes/allen2017_colours.csv",
+ "segmentation_folder": "../test_data/ttA_2877_NOP_segmentations",
+ "alignment_json": "../test_data/ttA_2877_NOP_horizontal_final_2017.json",
+ "nonlinear": true,
+ "colour": [0, 0, 255],
+ "points_json_path": "../outputs/test1_points.json",
+ "counts_per_label_name": "../outputs/test1_counts_per_allenID_2017.csv"
+}
\ No newline at end of file
diff --git a/testOOP.py b/testOOP.py
new file mode 100644
index 0000000000000000000000000000000000000000..ce0c65d1cab9a28d37c5531d511f8b82f454ffad
--- /dev/null
+++ b/testOOP.py
@@ -0,0 +1,11 @@
+from PyNutil import PyNutil
+
+pnt = PyNutil(settings_file=r"test/PVMouse_81264_test.json")
+# pnt = PyNutil(settings_file=r"test/test3.json")
+# pnt.build_quantifier()
+
+pnt.get_coordinates(object_cutoff=0)
+
+pnt.quantify_coordinates()
+
+pnt.save_analysis("outputs/test4_2017")
diff --git a/test_data/artificial_VisuAlign.json b/test_data/artificial_VisuAlign.json
new file mode 100644
index 0000000000000000000000000000000000000000..8cf0ad8a24e574fa513841af668acf558be68fd9
--- /dev/null
+++ b/test_data/artificial_VisuAlign.json
@@ -0,0 +1,58 @@
+{"name":"79556738","target":"ABA_Mouse_CCFv3_2015_25um.cutlas","target-resolution":[456.0, 528.0, 320.0],"slices":[
+{"filename":"s0002_79584187.jpg","nr":2,"width":5105,"height":5393,"anchoring":[339.8828755618759, 2.0058244431246566, 283.6986023762958, -222.73761701400005, 0.0, 1.0173104694760016, -1.0755359841146064, -3.5294053122332882, -235.4859497689915]},
+{"filename":"s0010_79584189.jpg","nr":10,"width":5969,"height":5633,"anchoring":[360.70740085313827, 10.219205194045301, 276.5194925943705, -260.4366338677024, -0.01616556398857938, 0.11088597504447506, -0.10449713623617948, -3.686448005444759, -245.96867106366167]},
+{"filename":"s0018_79584191.jpg","nr":18,"width":6705,"height":5681,"anchoring":[374.76867364650286, 18.395591482033026, 266.90290837423464, -292.4637835971117, 0.08906282285079216, 7.2782682158815115, -6.172433212170686, -3.717043395850994, -247.9823588963216]},
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diff --git a/test_data/ext-d000033_PVMouseExtraction_pub-Nutil_Quantifier_analysis-81264-Input_dir/PVMouse_81264_nonlin.json b/test_data/ext-d000033_PVMouseExtraction_pub-Nutil_Quantifier_analysis-81264-Input_dir/PVMouse_81264_nonlin.json
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\ No newline at end of file
diff --git a/workflows/calculate_objects_per_region.py b/workflows/calculate_objects_per_region.py
new file mode 100644
index 0000000000000000000000000000000000000000..a72a549177842854e41d4e7e9a4c85ee1d717ae6
--- /dev/null
+++ b/workflows/calculate_objects_per_region.py
@@ -0,0 +1,12 @@
+import cv2
+from skimage import measure
+
+
+# read the segmentation image
+segmentation_path = ""
+segmentation = cv2.imread(segmentation_path)
+# apply get centroids and area function
+
+# try to label the coordinates
+
+# try to save the coordinates to a csv file