From 5e0e29b19efe9e417dd384256f9e8d11a8afb20b Mon Sep 17 00:00:00 2001
From: Eleni Mathioulaki <emathioulaki@athenarc.gr>
Date: Tue, 21 Feb 2023 21:53:34 +0100
Subject: [PATCH] fix irkernel dependency
---
packages/r-irkernel/package.py | 39 ++++++++++++++++++++++++++++++++++
1 file changed, 39 insertions(+)
create mode 100644 packages/r-irkernel/package.py
diff --git a/packages/r-irkernel/package.py b/packages/r-irkernel/package.py
new file mode 100644
index 00000000..d6dd8db3
--- /dev/null
+++ b/packages/r-irkernel/package.py
@@ -0,0 +1,39 @@
+# this package was adapted from Spack upstream v0.18.1, to change the dependency on py-jupyter to py-jupyter-client
+
+# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+
+from spack import *
+
+
+class RIrkernel(RPackage):
+ """Native R Kernel for the 'Jupyter Notebook'.
+ The R kernel for the 'Jupyter' environment executes R code which the
+ front-end ('Jupyter Notebook' or other front-ends) submits to the kernel
+ via the network."""
+
+ cran = "IRkernel"
+
+ version('1.3', sha256='5a7fcbfd978dfb3cca6702a68a21c147551995fc400084ae8382ffcbbdae1903')
+ version('1.2', sha256='5fb4dbdb741d05043120a8be0eb73f054b607d9854f314bd79cfec08d219ff91')
+ version('0.7',
+ git="https://github.com/IRkernel/IRkernel.git",
+ commit='9cdd284e03eb42d03fab18544b81f486852d5fe0',
+ deprecated=True)
+
+ depends_on('r@3.2.0:', type=('build', 'run'))
+ depends_on('r-repr@0.4.99:', type=('build', 'run'))
+ depends_on('r-evaluate@0.10:', type=('build', 'run'))
+ depends_on('r-irdisplay@0.3.0.9999:', type=('build', 'run'))
+ depends_on('r-pbdzmq@0.2-1:', type=('build', 'run'))
+ depends_on('r-crayon', type=('build', 'run'))
+ depends_on('r-jsonlite@0.9.6:', type=('build', 'run'))
+ depends_on('r-uuid', type=('build', 'run'))
+ depends_on('r-digest', type=('build', 'run'))
+ depends_on('py-jupyter-client', type='run')
+
+ depends_on('r-evaluate@0.5.4:', type=('build', 'run'), when='@0.7')
+ depends_on('r-devtools', type=('build', 'run'), when='@0.7')
--
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