diff --git a/src/main/java/eu/hbp/mip/configuration/PersistenceConfiguration.java b/src/main/java/eu/hbp/mip/configuration/PersistenceConfiguration.java index 475fd93d377ae52242194b3a3639f8bd29a61585..ca6ecdffd2fdcbedbb297d63ae77ac1b1cf27ea1 100644 --- a/src/main/java/eu/hbp/mip/configuration/PersistenceConfiguration.java +++ b/src/main/java/eu/hbp/mip/configuration/PersistenceConfiguration.java @@ -30,33 +30,33 @@ public class PersistenceConfiguration { @Primary @Bean(name = "portalDatasource") @ConfigurationProperties(prefix="spring.portalDatasource") - public DataSource portalDataSource() { + private DataSource portalDataSource() { return DataSourceBuilder.create().build(); } @Bean(name = "metaDatasource") @ConfigurationProperties(prefix="spring.metaDatasource") - public DataSource metaDataSource() { + private DataSource metaDataSource() { return DataSourceBuilder.create().build(); } @Bean(name = "scienceDatasource") @ConfigurationProperties(prefix="spring.scienceDatasource") - public DataSource scienceDataSource() { + private DataSource scienceDataSource() { return DataSourceBuilder.create().build(); } @Bean @Autowired @Qualifier("metaJdbcTemplate") - public JdbcTemplate metaJdbcTemplate() { + private JdbcTemplate metaJdbcTemplate() { return new JdbcTemplate(metaDataSource()); } @Bean @Autowired @Qualifier("scienceJdbcTemplate") - public JdbcTemplate scienceJdbcTemplate() { + private JdbcTemplate scienceJdbcTemplate() { return new JdbcTemplate(scienceDataSource()); } diff --git a/src/main/java/eu/hbp/mip/controllers/AppsApi.java b/src/main/java/eu/hbp/mip/controllers/AppsApi.java index c544d492f64f8fce437c9490f3c93c1810c15150..8a61f04cda468e524c5d4ec8dc5a4d0e9e7b1afe 100644 --- a/src/main/java/eu/hbp/mip/controllers/AppsApi.java +++ b/src/main/java/eu/hbp/mip/controllers/AppsApi.java @@ -33,16 +33,16 @@ public class AppsApi { private static final Logger LOGGER = Logger.getLogger(AppsApi.class); @Autowired - SecurityConfiguration securityConfiguration; + private SecurityConfiguration securityConfiguration; @Autowired - AppRepository appRepository; + private AppRepository appRepository; @Autowired - VoteRepository voteRepository; + private VoteRepository voteRepository; @Autowired - UserRepository userRepository; + private UserRepository userRepository; @ApiOperation(value = "Get apps", response = App.class, responseContainer = "List") @ApiResponses(value = { @ApiResponse(code = 200, message = "Success") }) diff --git a/src/main/java/eu/hbp/mip/controllers/ArticlesApi.java b/src/main/java/eu/hbp/mip/controllers/ArticlesApi.java index 8243c377cc6f2e70d93f05a91f28a0287383a511..024b49b076eccfc2e213c54ca757f5979fdaa4bb 100644 --- a/src/main/java/eu/hbp/mip/controllers/ArticlesApi.java +++ b/src/main/java/eu/hbp/mip/controllers/ArticlesApi.java @@ -32,10 +32,10 @@ public class ArticlesApi { private static final Logger LOGGER = Logger.getLogger(ArticlesApi.class); @Autowired - SecurityConfiguration securityConfiguration; + private SecurityConfiguration securityConfiguration; @Autowired - ArticleRepository articleRepository; + private ArticleRepository articleRepository; @ApiOperation(value = "Get articles", response = Article.class, responseContainer = "List") @ApiResponses(value = { @ApiResponse(code = 200, message = "Success") }) diff --git a/src/main/java/eu/hbp/mip/controllers/DatasetsApi.java b/src/main/java/eu/hbp/mip/controllers/DatasetsApi.java index 30e562bbf56bd8543cbfe2e2e168a9edd718f81f..ebbef8d5ec675c2ae25c9e478ea1a0c0a4f885f5 100644 --- a/src/main/java/eu/hbp/mip/controllers/DatasetsApi.java +++ b/src/main/java/eu/hbp/mip/controllers/DatasetsApi.java @@ -26,7 +26,7 @@ public class DatasetsApi { private static final Logger LOGGER = Logger.getLogger(DatasetsApi.class); @Autowired - DatasetRepository datasetRepository; + private DatasetRepository datasetRepository; @ApiOperation(value = "Get a dataset", response = Dataset.class) @ApiResponses(value = { @ApiResponse(code = 200, message = "Success") }) diff --git a/src/main/java/eu/hbp/mip/controllers/ExperimentApi.java b/src/main/java/eu/hbp/mip/controllers/ExperimentApi.java index 9ce3274f87cb3f2524d1c4d9d59a00b07bf695b8..9ec76e3aa0e494dae2995921591a50ac02d77ce0 100644 --- a/src/main/java/eu/hbp/mip/controllers/ExperimentApi.java +++ b/src/main/java/eu/hbp/mip/controllers/ExperimentApi.java @@ -60,13 +60,13 @@ public class ExperimentApi { private String miningExaremeQueryUrl; @Autowired - SecurityConfiguration securityConfiguration; + private SecurityConfiguration securityConfiguration; @Autowired - ModelRepository modelRepository; + private ModelRepository modelRepository; @Autowired - ExperimentRepository experimentRepository; + private ExperimentRepository experimentRepository; @ApiOperation(value = "Send a request to the workflow to run an experiment", response = Experiment.class) diff --git a/src/main/java/eu/hbp/mip/controllers/ModelsApi.java b/src/main/java/eu/hbp/mip/controllers/ModelsApi.java index 200ea9828aed350652a948d888bb038223ae6036..6066eb20598d5e4ba33b76dd4a6cb9c8d2c07595 100644 --- a/src/main/java/eu/hbp/mip/controllers/ModelsApi.java +++ b/src/main/java/eu/hbp/mip/controllers/ModelsApi.java @@ -37,22 +37,22 @@ public class ModelsApi { private static final Logger LOGGER = Logger.getLogger(ModelsApi.class); @Autowired - SecurityConfiguration securityConfiguration; + private SecurityConfiguration securityConfiguration; @Autowired - DatasetRepository datasetRepository; + private DatasetRepository datasetRepository; @Autowired - ModelRepository modelRepository; + private ModelRepository modelRepository; @Autowired - QueryRepository queryRepository; + private QueryRepository queryRepository; @Autowired - ConfigRepository configRepository; + private ConfigRepository configRepository; @Autowired - VariableRepository variableRepository; + private VariableRepository variableRepository; @Autowired @Qualifier("scienceJdbcTemplate") diff --git a/src/main/java/eu/hbp/mip/controllers/StatsApi.java b/src/main/java/eu/hbp/mip/controllers/StatsApi.java index 3601b617b7375c2e4721b3ff3d29735470de61c8..50232c3e49468c0de937c0d423961df7cb7fdc8c 100644 --- a/src/main/java/eu/hbp/mip/controllers/StatsApi.java +++ b/src/main/java/eu/hbp/mip/controllers/StatsApi.java @@ -31,10 +31,10 @@ public class StatsApi { private static final Logger LOGGER = Logger.getLogger(StatsApi.class); @Autowired - UserRepository userRepository; + private UserRepository userRepository; @Autowired - ArticleRepository articleRepository; + private ArticleRepository articleRepository; @Autowired @Qualifier("scienceJdbcTemplate") diff --git a/src/main/java/eu/hbp/mip/controllers/UsersApi.java b/src/main/java/eu/hbp/mip/controllers/UsersApi.java index 13a8f54e560f726d6b29087ceac79f6f0a16d13e..c046065bfa72623619065a9d96fa99923dd01b99 100644 --- a/src/main/java/eu/hbp/mip/controllers/UsersApi.java +++ b/src/main/java/eu/hbp/mip/controllers/UsersApi.java @@ -25,7 +25,7 @@ public class UsersApi { private static final Logger LOGGER = Logger.getLogger(UsersApi.class); @Autowired - UserRepository userRepository; + private UserRepository userRepository; @ApiOperation(value = "Get a user", response = User.class) @ApiResponses(value = { @ApiResponse(code = 200, message = "Found"), @ApiResponse(code = 404, message = "Not found") })