From ee65a872f8cac1d2145bab9840155d1460a1dafe Mon Sep 17 00:00:00 2001
From: stevereis <stevereis93@gmail.com>
Date: Sun, 23 Jan 2022 21:24:42 +0100
Subject: [PATCH] fix: Handle parameters exceptions (exareme)
---
.../engine/connectors/exareme/converters.ts | 46 ++++++++++++++++---
1 file changed, 40 insertions(+), 6 deletions(-)
diff --git a/api/src/engine/connectors/exareme/converters.ts b/api/src/engine/connectors/exareme/converters.ts
index 06950ab..3c32f75 100644
--- a/api/src/engine/connectors/exareme/converters.ts
+++ b/api/src/engine/connectors/exareme/converters.ts
@@ -111,11 +111,6 @@ export const experimentInputToData = (data: ExperimentCreateInput) => {
label: 'pathology',
value: data.domain,
},
- {
- name: 'y',
- label: 'y',
- value: data.variables.join(','),
- },
...(formula
? [
{
@@ -132,10 +127,49 @@ export const experimentInputToData = (data: ExperimentCreateInput) => {
};
if (data.coVariables && data.coVariables.length) {
+ let separator = ',';
+
+ const design = params.algorithm.parameters.find((p) => p.name === 'design');
+ const excludes = [
+ 'Multiple Histograms',
+ 'CART',
+ 'ID3',
+ 'Naive Bayes Training',
+ ];
+
+ if (design && !excludes.includes(data.algorithm.id)) {
+ separator = design.value === 'additive' ? '+' : '*';
+ }
+
params.algorithm.parameters.push({
name: 'x',
label: 'x',
- value: data.coVariables.join(','),
+ value: data.coVariables.join(separator),
+ });
+ }
+
+ if (data.variables) {
+ let variables = data.variables.join(',');
+
+ if (data.algorithm.id === 'TTEST_PAIRED') {
+ const varCount = data.variables.length;
+ variables = data.variables
+ ?.reduce(
+ (vectors: string, v, i) =>
+ (i + 1) % 2 === 0
+ ? `${vectors}${v},`
+ : varCount === i + 1
+ ? `${vectors}${v}-${data.variables[0]}`
+ : `${vectors}${v}-`,
+ '',
+ )
+ .replace(/,$/, '');
+ }
+
+ params.algorithm.parameters.push({
+ name: 'y',
+ label: 'y',
+ value: variables,
});
}
--
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