From ff4ee935b1bf00a1e670ec871b32fb8bb6911c04 Mon Sep 17 00:00:00 2001
From: "w.klijn" <nonoice@gmail.com>
Date: Wed, 10 Aug 2016 14:10:25 +0200
Subject: [PATCH] Make the spikes have realistic id's and timings, the amount
of chars to output is now more in line with realworld output
---
tests/performance/io/disk_io.cpp | 15 +++++++++++----
tests/performance/io/disk_io.py | 2 --
2 files changed, 11 insertions(+), 6 deletions(-)
diff --git a/tests/performance/io/disk_io.cpp b/tests/performance/io/disk_io.cpp
index f9353c20..7cd78737 100644
--- a/tests/performance/io/disk_io.cpp
+++ b/tests/performance/io/disk_io.cpp
@@ -32,8 +32,8 @@ int main(int argc, char** argv) {
// very simple command line parsing
if (argc < 3)
{
- std::cout << "disk_io <int nrspikes> <int nr_repeats> <file_per_rank (true|false)> [simple_output (false|true)]" << std::endl;
- << " Simple performance test runner for the exporter manager"
+ std::cout << "disk_io <int nrspikes> <int nr_repeats> <file_per_rank (true|false)> [simple_output (false|true)]"
+ << " Simple performance test runner for the exporter manager"
<< " It exports nrspikes nr_repeats using the export_manager and will produce"
<< " the total, mean and std of the time needed to perform the output to disk"
<< " <file_per_rank> true will produce a single file per mpi rank"
@@ -88,9 +88,17 @@ int main(int argc, char** argv) {
// Create a set of spikes
std::vector<spike_type> spikes;
+
+ // *********************************************************************
+ // To have a realworld data set we get the average spikes per number
+ // and use that to get the nr of 'simulated' neurons, and create idxs
+ // using this value.
+ // Also assume that we have only a single second of simulated time
+ // All spike times should be between 0.0 and 1.0:
+ unsigned simulated_neurons = spikes_per_rank / 20;
for (unsigned idx = 0; idx < spikes_per_rank; ++idx)
{
- spikes.push_back({ { idx, 0 }, 0.0f + idx });
+ spikes.push_back({ { idx % simulated_neurons, 0 }, 0.0f + 1 / ( 0.05 +idx % 20)});
}
std::vector<int> timings;
@@ -117,7 +125,6 @@ int main(int argc, char** argv) {
file << *timings.begin() / double(CLOCKS_PER_SEC) * 1000;
for (auto time_entry = timings.begin()++; time_entry < timings.end(); ++time_entry)
{
-
file << "," << *time_entry / double(CLOCKS_PER_SEC) * 1000 ;
}
file << std::endl;
diff --git a/tests/performance/io/disk_io.py b/tests/performance/io/disk_io.py
index e8b40b7b..23b41fae 100644
--- a/tests/performance/io/disk_io.py
+++ b/tests/performance/io/disk_io.py
@@ -37,6 +37,4 @@ print ( mean )
print ( std )
plt.errorbar(range_nr_rank, mean, yerr=std, fmt='-o')
-plt.xscale('log')
-plt.yscale('log')
plt.show()
\ No newline at end of file
--
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