diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index b24f4c76efe7550fe20cd858f566ec03524be8cd..a763b2e51440b0089b6341fe2f28b4df1f0ba8ba 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -16,7 +16,7 @@ stages: variables: GIT_SUBMODULE_STRATEGY: recursive script: - - docker login -u $CI_REGISTRY_USER -p $CI_REGISTRY_PASSWORD $CI_REGISTRY + - docker login -u $CSCS_REGISTRY_USER -p $CSCS_REGISTRY_PASSWORD $CSCS_REGISTRY - docker build -f $BUILD_DOCKERFILE --network=host --cache-from $BUILD_IMAGE --build-arg BUILDKIT_INLINE_CACHE=1 -t $BUILD_IMAGE . - docker push $BUILD_IMAGE - docker build -f $DEPLOY_DOCKERFILE --network=host --build-arg BUILD_ENV=$BUILD_IMAGE -t $DEPLOY_IMAGE . @@ -26,17 +26,17 @@ build release: extends: .build_docker_images variables: BUILD_DOCKERFILE: ci/release/build.Dockerfile - BUILD_IMAGE: $CI_REGISTRY_IMAGE/release/build:latest + BUILD_IMAGE: $CSCS_REGISTRY_IMAGE/release/build:latest DEPLOY_DOCKERFILE: ci/release/deploy.Dockerfile - DEPLOY_IMAGE: $CI_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA + DEPLOY_IMAGE: $CSCS_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA build codecov: extends: .build_docker_images variables: BUILD_DOCKERFILE: ci/codecov/build.Dockerfile - BUILD_IMAGE: $CI_REGISTRY_IMAGE/codecov/build:latest + BUILD_IMAGE: $CSCS_REGISTRY_IMAGE/codecov/build:latest DEPLOY_DOCKERFILE: ci/codecov/deploy.Dockerfile - DEPLOY_IMAGE: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + DEPLOY_IMAGE: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA notify_github_start: stage: build @@ -62,7 +62,7 @@ variables: ### Release tests ### allocate release: stage: allocate - image: $CI_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA only: ['master', 'staging', 'trying'] extends: .daint_alloc variables: @@ -71,7 +71,7 @@ allocate release: single node release: extends: .daint - image: $CI_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA only: ['master', 'staging', 'trying'] stage: test script: @@ -85,7 +85,7 @@ single node release: multi node release: extends: .daint - image: $CI_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA only: ['master', 'staging', 'trying'] stage: test script: @@ -97,7 +97,7 @@ multi node release: deallocate release: only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/release/deploy:$CI_COMMIT_SHA stage: cleanup extends: .daint_dealloc variables: @@ -107,7 +107,7 @@ deallocate release: allocate codecov: stage: allocate only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA extends: .daint_alloc variables: PULL_IMAGE: 'YES' @@ -116,7 +116,7 @@ allocate codecov: single node codecov: extends: .daint only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA stage: test script: - codecov_pre @@ -135,7 +135,7 @@ single node codecov: multi node codecov: extends: .daint only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA stage: test script: - codecov_pre @@ -152,7 +152,7 @@ multi node codecov: upload codecov reports: extends: .daint only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA stage: upload_reports variables: SLURM_JOB_NUM_NODES: 1 @@ -162,7 +162,7 @@ upload codecov reports: deallocate codecov: only: ['master', 'staging', 'trying'] - image: $CI_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA + image: $CSCS_REGISTRY_IMAGE/codecov/deploy:$CI_COMMIT_SHA stage: cleanup extends: .daint_dealloc variables: diff --git a/arborio/CMakeLists.txt b/arborio/CMakeLists.txt index 4cc0e2a3ac6512f49928d191048d81d2a5974569..59a1bc30eed72ea59a60cbf3b82a583242016e48 100644 --- a/arborio/CMakeLists.txt +++ b/arborio/CMakeLists.txt @@ -8,9 +8,9 @@ if(ARB_WITH_NEUROML) with_xml.cpp xmlwrap.cpp ) + find_package(LibXml2 REQUIRED) endif() -find_package(LibXml2 REQUIRED) add_library(arborio ${arborio-sources}) diff --git a/ci/codecov/build.Dockerfile b/ci/codecov/build.Dockerfile index 23f9e621b0d2966ce67efdab1652152ffa348728..31e86f15d9eccabf2ec36a9dea223b59ba1daefa 100644 --- a/ci/codecov/build.Dockerfile +++ b/ci/codecov/build.Dockerfile @@ -1,4 +1,4 @@ -FROM nvidia/cuda:10.1-devel-ubuntu18.04 +FROM nvidia/cuda:10.2-devel-ubuntu18.04 WORKDIR /root @@ -10,11 +10,22 @@ ENV MPICH_VERSION ${MPICH_VERSION} # Install basic tools RUN apt-get update -qq && apt-get install -qq -y --no-install-recommends \ - build-essential lcov \ python3 \ - git tar wget curl && \ + git tar wget curl \ + gcc-8 g++-8 make && \ + update-alternatives \ + --install /usr/bin/gcc gcc /usr/bin/gcc-8 60 \ + --slave /usr/bin/g++ g++ /usr/bin/g++-8 \ + --slave /usr/bin/gcov gcov /usr/bin/gcov-8 && \ + update-alternatives --config gcc && \ rm -rf /var/lib/apt/lists/* +RUN wget -q "https://github.com/linux-test-project/lcov/archive/v1.14.tar.gz" && \ + tar -xzf v1.14.tar.gz && \ + cd lcov-1.14 && \ + make install -j$(nproc) && \ + rm -rf lcov-1.14 v1.14.tar.gz + # Install cmake RUN wget -qO- "https://github.com/Kitware/CMake/releases/download/v3.12.4/cmake-3.12.4-Linux-x86_64.tar.gz" | tar --strip-components=1 -xz -C /usr/local @@ -30,4 +41,4 @@ RUN wget -q https://www.mpich.org/static/downloads/${MPICH_VERSION}/mpich-${MPIC RUN wget -q https://github.com/haampie/libtree/releases/download/v1.2.0/libtree_x86_64.tar.gz && \ tar -xzf libtree_x86_64.tar.gz && \ rm libtree_x86_64.tar.gz && \ - ln -s /root/libtree/libtree /usr/local/bin/libtree \ No newline at end of file + ln -s /root/libtree/libtree /usr/local/bin/libtree diff --git a/ci/release/build.Dockerfile b/ci/release/build.Dockerfile index 4c17a820e44a2e5fc5d9d66d0fd0f6fe2e8b8888..e28015a5c71614e3e3448c32faa1c0eb9478d72f 100644 --- a/ci/release/build.Dockerfile +++ b/ci/release/build.Dockerfile @@ -1,4 +1,4 @@ -FROM nvidia/cuda:10.1-devel-ubuntu18.04 +FROM nvidia/cuda:10.2-devel-ubuntu18.04 WORKDIR /root @@ -10,9 +10,13 @@ ENV MPICH_VERSION ${MPICH_VERSION} # Install basic tools RUN apt-get update -qq && apt-get install -qq -y --no-install-recommends \ - build-essential \ python3 \ - git tar wget curl && \ + git tar wget curl \ + gcc-8 g++-8 make && \ + update-alternatives \ + --install /usr/bin/gcc gcc /usr/bin/gcc-8 60 \ + --slave /usr/bin/g++ g++ /usr/bin/g++-8 && \ + update-alternatives --config gcc && \ rm -rf /var/lib/apt/lists/* # Install cmake